MELO3C025792 (gene) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGCCCCCAAACATGTATGGATGAAGGAGGAGGAGGAACTCTAATCGAGTGTTTAGTGGAGTTGGTATCTGCCGGCGAATGGAAGTTGGACAATGGTACATTTCGGCCAGGTTACCTGACCCAACTTGTCTGCATGATGGCAGAAAAGTTGCCTAAATGTCACGTCCAAGCCACCACTGTAATAGAATGCAGAATTAAGACTTTGAAGCAAACCTTCCAAGCTATCGCAGAAATGGGTGGGTCAGCGTGCAGTGGGTTCGGATGGAACGATGAGGCAAAGTGCATCATTGTCGAGAAGGAACAATTTGACAACTGGGTTAGGGTAAGGAAATTTGATATTTAAAACGTGACAATACTTGTGCAGTGTACTTTGATTGACAATTTTTAATGGTAGTTTGAAGTGCTCGTGTTTTTTATATAGTCGCATTTAGCAGCGAAAAGGCTCCTTAACAAAGCCTCTTTAACAAACTCTTTCCTTATTATGACAAACTTACATATGTGTTCGAAAGGGATAAGGCAACTGGTCGTCGACGTCGGGTCTAATGAGCCTATCAGGTACGAGGGGTTTGACATGCCGGATGGAAACGATATGAGGTTTCCATCCATGTACAACTAGAGGATTGACATGTTCCAGGATGTTGTACACGCCTCACGACCTACTCGCTTGTCCGACGGTAGGCCTAGATCAAGCAGATCTAAGCGAAAGTGGGGAAGCGAGTGGGAGGGTAAAATTAAGATGATACATATGGTCCTGGAGTGTGCGAATGATCAACTGAGGACCATCGTCGAGTGGCCTTTGTGTGCCCTTGCCAATGACACCGCAGTTCGCCAGGAGTTCTTATGTCTATTGCGTGAGATGCCCGATCCAAGTAGTTTGGATAGGGCGATGTGCCAGAGGCTACTCTTGTGCAGTATGGATGACATACGCAGTTCATAG ATGTGCCCCCAAACATGTATGGATGAAGGAGGAGGAGGAACTCTAATCGAGTGTTTAGTGGAGTTGGTATCTGCCGGCGAATGGAAGTTGGACAATGGTACATTTCGGCCAGGTTACCTGACCCAACTTGTCTGCATGATGGCAGAAAAGTTGCCTAAATGTCACGTCCAAGCCACCACTGTAATAGAATGCAGAATTAAGACTTTGAAGCAAACCTTCCAAGCTATCGCAGAAATGGGTGGGTCAGCGTGCAGTGGGTTCGGATGGAACGATGAGGCAAAGTGCATCATTGTCGAGAAGGAACAATTTGACAACTGGGTTAGGGATGTTGTACACGCCTCACGACCTACTCGCTTGTCCGACGGTAGGCCTAGATCAAGCAGATCTAAGCGAAAGTGGGGAAGCGAGTGGGAGGGTAAAATTAAGATGATACATATGGTCCTGGAGTGTGCGAATGATCAACTGAGGACCATCGTCGAGTGGCCTTTGTGTGCCCTTGCCAATGACACCGCAGTTCGCCAGGAGTTCTTATGTCTATTGCGTGAGATGCCCGATCCAAGTAGTTTGGATAGGGCGATGTGCCAGAGGCTACTCTTGTGCAGTATGGATGACATACGCAGTTCATAG ATGTGCCCCCAAACATGTATGGATGAAGGAGGAGGAGGAACTCTAATCGAGTGTTTAGTGGAGTTGGTATCTGCCGGCGAATGGAAGTTGGACAATGGTACATTTCGGCCAGGTTACCTGACCCAACTTGTCTGCATGATGGCAGAAAAGTTGCCTAAATGTCACGTCCAAGCCACCACTGTAATAGAATGCAGAATTAAGACTTTGAAGCAAACCTTCCAAGCTATCGCAGAAATGGGTGGGTCAGCGTGCAGTGGGTTCGGATGGAACGATGAGGCAAAGTGCATCATTGTCGAGAAGGAACAATTTGACAACTGGGTTAGGGATGTTGTACACGCCTCACGACCTACTCGCTTGTCCGACGGTAGGCCTAGATCAAGCAGATCTAAGCGAAAGTGGGGAAGCGAGTGGGAGGGTAAAATTAAGATGATACATATGGTCCTGGAGTGTGCGAATGATCAACTGAGGACCATCGTCGAGTGGCCTTTGTGTGCCCTTGCCAATGACACCGCAGTTCGCCAGGAGTTCTTATGTCTATTGCGTGAGATGCCCGATCCAAGTAGTTTGGATAGGGCGATGTGCCAGAGGCTACTCTTGTGCAGTATGGATGACATACGCAGTTCATAG MCPQTCMDEGGGGTLIECLVELVSAGEWKLDNGTFRPGYLTQLVCMMAEKLPKCHVQATTVIECRIKTLKQTFQAIAEMGGSACSGFGWNDEAKCIIVEKEQFDNWVRDVVHASRPTRLSDGRPRSSRSKRKWGSEWEGKIKMIHMVLECANDQLRTIVEWPLCALANDTAVRQEFLCLLREMPDPSSLDRAMCQRLLLCSMDDIRSS*
BLAST of MELO3C025792 vs. TrEMBL
Match: E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 9.5e-34 Identity = 72/91 (79.12%), Postives = 77/91 (84.62%), Query Frame = 1
BLAST of MELO3C025792 vs. TrEMBL
Match: E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 1.7e-19 Identity = 54/100 (54.00%), Postives = 71/100 (71.00%), Query Frame = 1
HSP 2 Score: 145.6 bits (366), Expect = 6.8e-32 Identity = 80/168 (47.62%), Postives = 106/168 (63.10%), Query Frame = 1
BLAST of MELO3C025792 vs. TrEMBL
Match: E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 2.5e-26 Identity = 59/92 (64.13%), Postives = 72/92 (78.26%), Query Frame = 1
BLAST of MELO3C025792 vs. TrEMBL
Match: E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 3.2e-05 Identity = 32/103 (31.07%), Postives = 54/103 (52.43%), Query Frame = 1
HSP 2 Score: 99.0 bits (245), Expect = 7.3e-18 Identity = 45/94 (47.87%), Postives = 61/94 (64.89%), Query Frame = 1
BLAST of MELO3C025792 vs. TrEMBL
Match: A0A0A0KNB4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G420360 PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 2.0e-15 Identity = 41/86 (47.67%), Postives = 58/86 (67.44%), Query Frame = 1
BLAST of MELO3C025792 vs. NCBI nr
Match: gi|307135889|gb|ADN33754.1| (retrotransposon protein [Cucumis melo subsp. melo]) HSP 1 Score: 151.8 bits (382), Expect = 1.4e-33 Identity = 72/91 (79.12%), Postives = 77/91 (84.62%), Query Frame = 1
BLAST of MELO3C025792 vs. NCBI nr
Match: gi|307135889|gb|ADN33754.1| (retrotransposon protein [Cucumis melo subsp. melo]) HSP 1 Score: 104.4 bits (259), Expect = 2.5e-19 Identity = 54/100 (54.00%), Postives = 71/100 (71.00%), Query Frame = 1
HSP 2 Score: 145.6 bits (366), Expect = 9.8e-32 Identity = 80/168 (47.62%), Postives = 106/168 (63.10%), Query Frame = 1
BLAST of MELO3C025792 vs. NCBI nr
Match: gi|659082641|ref|XP_008441954.1| (PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo]) HSP 1 Score: 132.9 bits (333), Expect = 6.6e-28 Identity = 56/93 (60.22%), Postives = 77/93 (82.80%), Query Frame = 1
BLAST of MELO3C025792 vs. NCBI nr
Match: gi|659118456|ref|XP_008459129.1| (PREDICTED: uncharacterized protein LOC103498329 [Cucumis melo]) HSP 1 Score: 131.0 bits (328), Expect = 2.5e-27 Identity = 63/94 (67.02%), Postives = 73/94 (77.66%), Query Frame = 1
BLAST of MELO3C025792 vs. NCBI nr
Match: gi|659118456|ref|XP_008459129.1| (PREDICTED: uncharacterized protein LOC103498329 [Cucumis melo]) HSP 1 Score: 33.9 bits (76), Expect = 4.2e+02 Identity = 20/56 (35.71%), Postives = 29/56 (51.79%), Query Frame = 1
HSP 2 Score: 127.1 bits (318), Expect = 3.6e-26 Identity = 59/92 (64.13%), Postives = 72/92 (78.26%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|