MELO3C025691 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C025691
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Pentatricopeptide repeat-containing family protein
Location	chr11 : 24944637 .. 24946540 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGAAGATGTTCAGAAATACAGGAAATCATTTGAAAGCGGAAAGCTTACTTGTCATGATGAAAGAGTCTGGAATAGATCCCACTGTTGCCACTATGCACTTGTTAATGGTTTCTTATGGCAGTTCTGGCCACCCTAAGGAAGCTGAAAAGGTTCTCAATGATCTGAAAGCTACTGGCATGGATCTTGATACATTACCATATAGTTCAGTAATTGATGCCTATCTCAGAAACAGAGATTACAGCGGTGGAATCCAGAAACTGATGGCAATGAAAGCAGATGGTATAGAGCCCGATTATAGAATATGGACGTGCTTTATAAGGGCCGCAAGTTTGTCTGAAAGTTCAAGTGAAGCCATTATCATTTTAAATGCATTGCAAGATACAGGATTCGATCTTCCAATCAGGTACTCAGTAATCTTTCTATTGTTAAAGCAAGACAATGTTTCAGGTCTCTTTTAATATGATGCTGTCAAGTATTTCTCGTTAATAACCATTTCAAGGTGAGCTTCTCTTGTAGGCTCTTGACACAAAAGTCGGGGACACTGATTCTGGAGGTTGACCAGTTTCTAGAGAAACTTGGAGCTTTGGAAGATGATGATGCAGCATTTAACTTCGTCAATGCTTTAGAGGATCTGCTGTGGGCATTTGAACTTCGAGCAACTGCATCATGGGTTTTTCAGTTGGCAATCAAGAGATCTATATACCGACAGGATATATTCAGGTATATACTAATTTGTTCCAGTTTTTTTTTTCTATCACATTTATTATGCCTACAAATAAGTTGTTTTGAGAAATTCAGCTTTTCCTCCAAATGGACCAAATCTACTATTGTCACCATTCAAGCTAAAATCTGAATTTTCCTGTATATCACTTTACAGAATTGCTCAACCAAATTGATTGAATCTATACTATTTACTTATTCTTGGAGAAAAGTAGGAGCCAATAGGGTAAATAAGTTGGAAAAGGTGGTGTGCACATGTAATTATGAGACAGAAAGGATATTTTTATAGTTTGTCCCACCATTTTTATGTCCTTAACCTTCATGGATTGACCTAGTGGTAAAAAAGAAACATAGTCTTAATAAATGACTAAGAGGTCAAGGTTCAATCCATGGAAGCGACCTACCTAGGAATTAATTTCCTACAAATTTCCTTGACACCTAAATGTTGTAGGGTCAAAGAGATTGTCCAGTGAGATTAGTTGAGGTACGTATAAAGCTAGCTTGGATACCCATGGATATAAAACCTTGTAACTGTGAAAATGGGCAGTTTATTAATAAGTATAGCATCTATTAATGGCTTGGAGTGCATTCGTCATCAAAAAAGTCAAGTGGGCCGATCGATTTGAGGCAGTCTGCTGTTGGTGGTGGCTCCCCTGCAAAGATGGATGGATTCTAAGAATTTATATTACTACTAAACCTTTTTCTACTGTGTACAACTAGTTATTCATTTGTTCCAAGATTCGAAAAAGTGTCATTATGTCGATGGATTGAGACTTTTGCACTCTGGTTGGCTTTTGCACTTGACAATCAATGCCTCTTCCTGGGTTGGAGTTACAATGTCATGTGGTGACTTTAGGCGCCACTAACCCAATCATGGGTGACCATGGTGTTTAGATGAGTGAATGTGAACCCTTACTTCATATTAGGTTTTTAGCCTTATTGTAGCCATATTGTGAGATTGGTATAATTGGTTTGTTACTTATATCATTATATGTTACCTTCTTATGTTCTAGTCTAATAATGCAGGGTAGCTGACAAGGACTGGGGTGCTGATTTTAGAAAGCTGTCTGCTGGTTCAGCCCTTGTTGCTCTGACTTTATGGCTTGACCATATGCAGGCTAGTTCTTTTACTATGCCGTGGCAAATAATTTCCACATTAAGCTACCTCTACGTCAATTGA

mRNA sequence

ATGATGAAGATGTTCAGAAATACAGGAAATCATTTGAAAGCGGAAAGCTTACTTGTCATGATGAAAGAGTCTGGAATAGATCCCACTGTTGCCACTATGCACTTGTTAATGGTTTCTTATGGCAGTTCTGGCCACCCTAAGGAAGCTGAAAAGGTTCTCAATGATCTGAAAGCTACTGGCATGGATCTTGATACATTACCATATAGTTCAGTAATTGATGCCTATCTCAGAAACAGAGATTACAGCGGTGGAATCCAGAAACTGATGGCAATGAAAGCAGATGGTATAGAGCCCGATTATAGAATATGGACGTGCTTTATAAGGGCCGCAAGTTTGTCTGAAAGTTCAAGTGAAGCCATTATCATTTTAAATGCATTGCAAGATACAGGATTCGATCTTCCAATCAGGCTCTTGACACAAAAGTCGGGGACACTGATTCTGGAGGTTGACCAGTTTCTAGAGAAACTTGGAGCTTTGGAAGATGATGATGCAGCATTTAACTTCGTCAATGCTTTAGAGGATCTGCTGTGGGCATTTGAACTTCGAGCAACTGCATCATGGGTTTTTCAGTTGGCAATCAAGAGATCTATATACCGACAGGATATATTCAGGGTAGCTGACAAGGACTGGGGTGCTGATTTTAGAAAGCTGTCTGCTGGTTCAGCCCTTGTTGCTCTGACTTTATGGCTTGACCATATGCAGGCTAGTTCTTTTACTATGCCGTGGCAAATAATTTCCACATTAAGCTACCTCTACGTCAATTGA

Coding sequence (CDS)

ATGATGAAGATGTTCAGAAATACAGGAAATCATTTGAAAGCGGAAAGCTTACTTGTCATGATGAAAGAGTCTGGAATAGATCCCACTGTTGCCACTATGCACTTGTTAATGGTTTCTTATGGCAGTTCTGGCCACCCTAAGGAAGCTGAAAAGGTTCTCAATGATCTGAAAGCTACTGGCATGGATCTTGATACATTACCATATAGTTCAGTAATTGATGCCTATCTCAGAAACAGAGATTACAGCGGTGGAATCCAGAAACTGATGGCAATGAAAGCAGATGGTATAGAGCCCGATTATAGAATATGGACGTGCTTTATAAGGGCCGCAAGTTTGTCTGAAAGTTCAAGTGAAGCCATTATCATTTTAAATGCATTGCAAGATACAGGATTCGATCTTCCAATCAGGCTCTTGACACAAAAGTCGGGGACACTGATTCTGGAGGTTGACCAGTTTCTAGAGAAACTTGGAGCTTTGGAAGATGATGATGCAGCATTTAACTTCGTCAATGCTTTAGAGGATCTGCTGTGGGCATTTGAACTTCGAGCAACTGCATCATGGGTTTTTCAGTTGGCAATCAAGAGATCTATATACCGACAGGATATATTCAGGGTAGCTGACAAGGACTGGGGTGCTGATTTTAGAAAGCTGTCTGCTGGTTCAGCCCTTGTTGCTCTGACTTTATGGCTTGACCATATGCAGGCTAGTTCTTTTACTATGCCGTGGCAAATAATTTCCACATTAAGCTACCTCTACGTCAATTGA

Protein sequence

MMKMFRNTGNHLKAESLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMDLDTLPYSSVIDAYLRNRDYSGGIQKLMAMKADGIEPDYRIWTCFIRAASLSESSSEAIIILNALQDTGFDLPIRLLTQKSGTLILEVDQFLEKLGALEDDDAAFNFVNALEDLLWAFELRATASWVFQLAIKRSIYRQDIFRVADKDWGADFRKLSAGSALVALTLWLDHMQASSFTMPWQIISTLSYLYVN*

Homology

[Close]

BLAST of MELO3C025691 vs. Swiss-Prot
Match: PP241_ARATH (Pentatricopeptide repeat-containing protein At3g18110, chloroplastic OS=Arabidopsis thaliana GN=EMB1270 PE=2 SV=2)

HSP 1 Score: 323.2 bits (827), Expect = 2.6e-87
Identity = 159/237 (67.09%), Postives = 198/237 (83.54%), Query Frame = 1


Query: 1    MMKMFRNTGNHLKAESLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATG 60
            MMK+ R++G+  KAE LL MMK +GI+PT+ATMHLLMVSY SSG+P+EAEKVL++LK T 
Sbjct: 1038 MMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTE 1097

Query: 61   MDLDTLPYSSVIDAYLRNRDYSGGIQKLMAMKADGIEPDYRIWTCFIRAASLSESSSEAI 120
            ++L TLPYSSVIDAYLR++DY+ GI++L+ MK +G+EPD+RIWTCF+RAAS S+   E +
Sbjct: 1098 VELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEKIEVM 1157

Query: 121  IILNALQDTGFDLPIRLLTQKSGTLILEVDQFLEKLGALEDDDAAFNFVNALEDLLWAFE 180
            ++L AL+D GFDLPIRLL  +   L+ EVD + EKL ++E D+AA NFVNAL +LLWAFE
Sbjct: 1158 LLLKALEDIGFDLPIRLLAGRPELLVSEVDGWFEKLKSIE-DNAALNFVNALLNLLWAFE 1217

Query: 181  LRATASWVFQLAIKRSIYRQDIFRVADKDWGADFRKLSAGSALVALTLWLDHMQASS 238
            LRATASWVFQL IKR I+  D+FRVADKDWGADFR+LS G+ALVALTLWLDHMQ +S
Sbjct: 1218 LRATASWVFQLGIKRGIFSLDVFRVADKDWGADFRRLSGGAALVALTLWLDHMQDAS 1273

[Close]

BLAST of MELO3C025691 vs. Swiss-Prot
Match: PP392_ARATH (Pentatricopeptide repeat-containing protein At5g18475 OS=Arabidopsis thaliana GN=At5g18475 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 8.3e-09
Identity = 37/133 (27.82%), Postives = 65/133 (48.87%), Query Frame = 1


Query: 1   MMKMFRNTGNHLKAESLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATG 60
           M+  F   G   +A+ +L  MK++G +P V     LM  +   G  +EA++  +++K TG
Sbjct: 274 MINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTG 333

Query: 61  MDLDTLPYSSVIDAYLRNRDYSGGIQKLMAMKADGIEPDYRIWTCFIRAASLSESSSEAI 120
           + LDT+ Y+++++ + RN +    ++ L  MKA     D   +   +R  S    S EA+
Sbjct: 334 LKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEAL 393

Query: 121 IILNALQDTGFDL 134
            +L+     G  L
Sbjct: 394 QMLDQWGSEGVHL 406

[Close]

BLAST of MELO3C025691 vs. Swiss-Prot
Match: PP180_ARATH (Pentatricopeptide repeat-containing protein At2g32630 OS=Arabidopsis thaliana GN=At2g32630 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.2e-07
Identity = 34/145 (23.45%), Postives = 70/145 (48.28%), Query Frame = 1


Query: 1   MMKMFRNTGNHLKAESLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATG 60
           ++ ++   GN  +A+ L V M   G+ P   T ++++ +Y   G  KEA K+  +++A G
Sbjct: 475 LIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANG 534

Query: 61  MDLDTLPYSSVIDAYLRNRDYSGGIQKLMAMKADGIEPDYRIWTCFIRAASLSESSSEAI 120
           MD D+  Y+S+I       +    ++    M   G++ +   +T  I   S +  S EA 
Sbjct: 535 MDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAF 594

Query: 121 IILNALQDTGFDLPIRLLTQKSGTL 146
            + + ++  G+ +  ++ T   G++
Sbjct: 595 GLYDEMKRKGYTIDNKVYTALIGSM 619

HSP 2 Score: 52.4 bits (124), Expect = 8.6e-06
Identity = 26/119 (21.85%), Postives = 62/119 (52.10%), Query Frame = 1


Query: 21  MKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMDLDTLPYSSVIDAYLRNRD 80
           M +SG+  TV ++ +++      G  ++++K++ +    G+  +   Y+++I+AY++ RD
Sbjct: 215 MVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRD 274

Query: 81  YSGGIQKLMAMKADGIEPDYRIWTCFIRAASLSESSSEAIIILNALQDTGFDLPIRLLT 140
           +SG    L  MK DG+  +   +T  +  +  +   S+A  + + +++ G +  + + T
Sbjct: 275 FSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYT 333

HSP 3 Score: 41.2 bits (95), Expect = 2.0e-02
Identity = 27/119 (22.69%), Postives = 49/119 (41.18%), Query Frame = 1


Query: 15  ESLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMDLDTLPYSSVIDA 74
           E +L +MK+ G+     T  LLM     +G   +AEK+ ++++  G++ D   Y+S+I  
Sbjct: 279 EGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISW 338

Query: 75  YLRNRDYSGGIQKLMAMKADGIEPDYRIWTCFIRAASLSESSSEAIIILNALQDTGFDL 134
             R  +          +   G+ P    +   I           A I++N +Q  G ++
Sbjct: 339 NCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNI 397

[Close]

BLAST of MELO3C025691 vs. Swiss-Prot
Match: PP199_ARATH (Pentatricopeptide repeat-containing protein At2g41720 OS=Arabidopsis thaliana GN=EMB2654 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 4.6e-07
Identity = 29/116 (25.00%), Postives = 56/116 (48.28%), Query Frame = 1


Query: 13  KAESLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMDLDTLPYSSVI 72
           +A S L  M++  I  T      ++ +Y   G   EAE + N +K  G + D + Y+S++
Sbjct: 548 EAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSML 607

Query: 73  DAYLRNRDYSGGIQKLMAMKADGIEPDYRIWTCFIRAASLSESSSEAIIILNALQD 129
            AY  +  +    +  + M+A+GIEPD    +  +RA +     S   ++++ +++
Sbjct: 608 HAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMRE 663

HSP 2 Score: 36.6 bits (83), Expect = 4.9e-01
Identity = 25/107 (23.36%), Postives = 51/107 (47.66%), Query Frame = 1


Query: 13  KAESLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMDLDTLPYSSVI 72
           KA+ + +MM++    P V T + L+ +YGS+G   EA ++   ++  G+  + +   +++
Sbjct: 408 KAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL 467

Query: 73  DAYLRNRDYSGGIQKLMAMKADGIEPDYRIWT----CFIRAASLSES 116
            A  R++        L A ++ GI  +   +      +I AA L ++
Sbjct: 468 AACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKA 514

[Close]

BLAST of MELO3C025691 vs. Swiss-Prot
Match: PP426_ARATH (Pentatricopeptide repeat-containing protein At5g50280, chloroplastic OS=Arabidopsis thaliana GN=EMB1006 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 6.0e-07
Identity = 32/109 (29.36%), Postives = 55/109 (50.46%), Query Frame = 1


Query: 7   NTGNHLK-AESLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMDLDT 66
           N  NH++  E L   M++ G+ P+ AT ++LM +Y     P   E +L +++  G++ + 
Sbjct: 390 NKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNV 449

Query: 67  LPYSSVIDAYLRNRDYSG-GIQKLMAMKADGIEPDYRIWTCFIRAASLS 114
             Y+ +I AY R +  S       + MK  G++P    +T  I A S+S
Sbjct: 450 KSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVS 498

HSP 2 Score: 50.1 bits (118), Expect = 4.3e-05
Identity = 26/97 (26.80%), Postives = 48/97 (49.48%), Query Frame = 1


Query: 5   FRNTGNHLKAESLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMDLD 64
           F   G +++A  ++    + G+ P+V T ++LM +Y   G   +  ++L ++ A  +  D
Sbjct: 565 FAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPD 624

Query: 65  TLPYSSVIDAYLRNRDYSGGIQKLMAMKADGIEPDYR 102
           ++ YS++I A++R RD+         M   G  PD R
Sbjct: 625 SITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPR 661

[Close]

BLAST of MELO3C025691 vs. TrEMBL
Match: A0A0A0KFM9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G222480 PE=4 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 1.3e-106
Identity = 200/204 (98.04%), Postives = 201/204 (98.53%), Query Frame = 1


Query: 1    MMKMFRNTGNHLKAESLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATG 60
            MMKMFRNTGNHLKAESLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATG
Sbjct: 1060 MMKMFRNTGNHLKAESLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATG 1119

Query: 61   MDLDTLPYSSVIDAYLRNRDYSGGIQKLMAMKADGIEPDYRIWTCFIRAASLSESSSEAI 120
            MDLDTLPYSSVIDAYLRN+DYS GIQKLMAMKADGIEPDYRIWTC IRAASLSESSSEAI
Sbjct: 1120 MDLDTLPYSSVIDAYLRNKDYSAGIQKLMAMKADGIEPDYRIWTCCIRAASLSESSSEAI 1179

Query: 121  IILNALQDTGFDLPIRLLTQKSGTLILEVDQFLEKLGALEDDDAAFNFVNALEDLLWAFE 180
            IILNALQDTGFDLPIRLLTQKSGTLILEVDQFLEKLGALEDDDA FNFVNALEDLLWAFE
Sbjct: 1180 IILNALQDTGFDLPIRLLTQKSGTLILEVDQFLEKLGALEDDDAGFNFVNALEDLLWAFE 1239

Query: 181  LRATASWVFQLAIKRSIYRQDIFR 205
            LRATASWVFQLAIKRSIYRQDIFR
Sbjct: 1240 LRATASWVFQLAIKRSIYRQDIFR 1263

[Close]

BLAST of MELO3C025691 vs. TrEMBL
Match: A0A0A0KFM9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G222480 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.1e-06
Identity = 31/96 (32.29%), Postives = 52/96 (54.17%), Query Frame = 1


Query: 13  KAESLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMDLDTLPYSSVI 72
           +A +++  M +SG+ PT+ T   L+  YG  G P EAEK  + ++ +G+  D L YS +I
Sbjct: 478 EAANIMTEMLDSGVKPTLRTYSALICGYGKVGKPVEAEKTFDCMRRSGIRPDYLAYSVMI 537

Query: 73  DAYLRNRDYSGGIQKLMAMKADGIEPDYRIWTCFIR 109
           D +LR  +    +     M  DG+ PD  ++   +R
Sbjct: 538 DLFLRFNETKKAMLLYKEMVCDGLTPDGALYEVMLR 573

HSP 2 Score: 373.6 bits (958), Expect = 1.9e-100
Identity = 186/250 (74.40%), Postives = 215/250 (86.00%), Query Frame = 1


Query: 1    MMKMFRNTGNHLKAESLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATG 60
            MMKMFRN+GNH KAE LL +MKE+G++PT+ATMHLLMVSY  SG P+EAEKVL++LK  G
Sbjct: 1065 MMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEG 1124

Query: 61   MDLDTLPYSSVIDAYLRNRDYSGGIQKLMAMKADGIEPDYRIWTCFIRAASLSESSSEAI 120
            + L TLPYSSVIDAYL+N D++  IQKLM MK DG+EPD+RIWTCF+RAASLS+ +SEAI
Sbjct: 1125 LPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTCFVRAASLSQHTSEAI 1184

Query: 121  IILNALQDTGFDLPIRLLTQKSGTLILEVDQFLEKLGALEDDDAAFNFVNALEDLLWAFE 180
            ++L AL+DTGFDLPIRLLT+KS +L+ EVD  LEKLG LE D+AAFNFVNALEDLLWAFE
Sbjct: 1185 VLLKALRDTGFDLPIRLLTEKSDSLVSEVDNCLEKLGPLE-DNAAFNFVNALEDLLWAFE 1244

Query: 181  LRATASWVFQLAIKRSIYRQDIFRVADKDWGADFRKLSAGSALVALTLWLDHMQASSFTM 240
            LRATASWVFQLA+KRSIYR D+FRVA+KDWGADFRK+SAGSALV LTLWLDHMQA  F  
Sbjct: 1245 LRATASWVFQLAVKRSIYRHDVFRVAEKDWGADFRKMSAGSALVGLTLWLDHMQAKYFYF 1304

Query: 241  PWQIISTLSY 251
             WQ  S   Y
Sbjct: 1305 -WQDASLQGY 1312

[Close]

BLAST of MELO3C025691 vs. TrEMBL
Match: F6HEH6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0039g02570 PE=4 SV=1)

HSP 1 Score: 33.1 bits (74), Expect = 6.0e+02
Identity = 18/70 (25.71%), Postives = 37/70 (52.86%), Query Frame = 1


Query: 28  PTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMDLDTLPYSSVIDAYLRNRDYSGGIQK 87
           P + T + ++  YG  G  +EA ++  DL++ G   D + Y+S++ A+ R     G + K
Sbjct: 359 PDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAR----EGNVDK 418

Query: 88  LMAMKADGIE 98
           +  +  D ++
Sbjct: 419 VKEICEDMVK 424

HSP 2 Score: 371.3 bits (952), Expect = 9.3e-100
Identity = 182/236 (77.12%), Postives = 211/236 (89.41%), Query Frame = 1


Query: 1    MMKMFRNTGNHLKAESLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATG 60
            MMKMFRN+GNH KAE LL +MKE+G++PT+ATMHLLMVSY  SG P+EAEKVL++LK  G
Sbjct: 1065 MMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEG 1124

Query: 61   MDLDTLPYSSVIDAYLRNRDYSGGIQKLMAMKADGIEPDYRIWTCFIRAASLSESSSEAI 120
            + L TLPYSSVIDAYL+N D++  IQKLM MK DG+EPD+RIWTCF+RAASLS+ +SEAI
Sbjct: 1125 LPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTCFVRAASLSQHTSEAI 1184

Query: 121  IILNALQDTGFDLPIRLLTQKSGTLILEVDQFLEKLGALEDDDAAFNFVNALEDLLWAFE 180
            ++L AL+DTGFDLPIRLLT+KS +L+ EVD  LEKLG LE D+AAFNFVNALEDLLWAFE
Sbjct: 1185 VLLKALRDTGFDLPIRLLTEKSDSLVSEVDNCLEKLGPLE-DNAAFNFVNALEDLLWAFE 1244

Query: 181  LRATASWVFQLAIKRSIYRQDIFRVADKDWGADFRKLSAGSALVALTLWLDHMQAS 237
            LRATASWVFQLA+KRSIYR D+FRVA+KDWGADFRK+SAGSALV LTLWLDHMQAS
Sbjct: 1245 LRATASWVFQLAVKRSIYRHDVFRVAEKDWGADFRKMSAGSALVGLTLWLDHMQAS 1299

[Close]

BLAST of MELO3C025691 vs. TrEMBL
Match: A5AVZ0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005527 PE=4 SV=1)

HSP 1 Score: 33.1 bits (74), Expect = 6.0e+02
Identity = 18/70 (25.71%), Postives = 37/70 (52.86%), Query Frame = 1


Query: 28  PTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMDLDTLPYSSVIDAYLRNRDYSGGIQK 87
           P + T + ++  YG  G  +EA ++  DL++ G   D + Y+S++ A+ R     G + K
Sbjct: 359 PDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAR----EGNVDK 418

Query: 88  LMAMKADGIE 98
           +  +  D ++
Sbjct: 419 VKEICEDMVK 424

HSP 2 Score: 365.5 bits (937), Expect = 5.1e-98
Identity = 184/240 (76.67%), Postives = 207/240 (86.25%), Query Frame = 1


Query: 1    MMKMFRNTGNHLKAESLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATG 60
            MMKMFRN+GNH KAE L  MMKE+GI+P  ATMHLLMVSYGSSG P+EAEKVL++LK TG
Sbjct: 925  MMKMFRNSGNHAKAEMLFTMMKEAGIEPNFATMHLLMVSYGSSGQPQEAEKVLDNLKVTG 984

Query: 61   MDLDTLPYSSVIDAYLRNRDYSGGIQKLMAMKADGIEPDYRIWTCFIRAASLSESSSEAI 120
            +DLDTLPYSSVI AYL+N DY+ GIQKL  MK  G+EPD+RIWTCFIRAASLS+  SEAI
Sbjct: 985  LDLDTLPYSSVIGAYLKNGDYNIGIQKLNEMKEVGLEPDHRIWTCFIRAASLSQHKSEAI 1044

Query: 121  IILNALQDTGFDLPIRLLTQKSGTLILEVDQFLEKLGALEDDDAAFNFVNALEDLLWAFE 180
            I+LNAL+D GFDLPIRL+T+K  +LILEVD  LEKL  LE D+AAFNFVNALEDLLWA+E
Sbjct: 1045 ILLNALRDAGFDLPIRLVTEKPESLILEVDHCLEKLEPLE-DNAAFNFVNALEDLLWAYE 1104

Query: 181  LRATASWVFQLAIKRSIYRQDIFRVADKDWGADFRKLSAGSALVALTLWLDHMQASSFTM 240
            LRATASWVFQLA+KR IY  D+FRVADKDW ADFRKLSAGSALV LTLWLD MQA+ F +
Sbjct: 1105 LRATASWVFQLAVKRGIYNNDVFRVADKDWAADFRKLSAGSALVGLTLWLDQMQATLFLL 1163

[Close]

BLAST of MELO3C025691 vs. TrEMBL
Match: M5WF65_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023974mg PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.5e-04
Identity = 34/133 (25.56%), Postives = 64/133 (48.12%), Query Frame = 1


Query: 1   MMKMFRNTGNHLKAESLLVMMKESGIDPTVATMHLLMVSYGSSGH--PKEAEKVLNDLKA 60
           MM ++   G   K + LL +M+E G +P + +++ L+ +   SG   P  A  +LN+++ 
Sbjct: 120 MMGVYARNGRFNKVQELLNLMRERGCEPDLVSLNTLINARLRSGAMVPNLAIDLLNEVRR 179

Query: 61  TGMDLDTLPYSSVIDAYLRNRDYSGGIQKLMAMKADGIEPDYRIWTCFIRAASLSESSSE 120
           +G+  D + Y+++I    R  +    ++    M+A   +PD   +   I        SSE
Sbjct: 180 SGLRPDIITYNTLISGCSRESNLEEAVKVYNDMEAHNCQPDLWTYNAMISVYGRCGESSE 239

Query: 121 AIIILNALQDTGF 132
           A  +   L+  GF
Sbjct: 240 AERLFKELESKGF 252

HSP 2 Score: 36.6 bits (83), Expect = 5.4e+01
Identity = 17/60 (28.33%), Postives = 32/60 (53.33%), Query Frame = 1


Query: 21  MKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMDLDTLPYSSVIDAYLRNRD 80
           M+     P + T + ++  YG  G   EAE++  +L++ G   D + Y+S++ A+ R  D
Sbjct: 212 MEAHNCQPDLWTYNAMISVYGRCGESSEAERLFKELESKGFFPDAVTYNSLLYAFARELD 271

HSP 3 Score: 33.5 bits (75), Expect = 4.6e+02
Identity = 21/99 (21.21%), Postives = 42/99 (42.42%), Query Frame = 1


Query: 21  MKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMDLDTLPYSSVIDAYLRNRD 80
           M + G      T + ++  YG  G    A ++  D+K  G   D + Y+ +ID+  +   
Sbjct: 282 MMKMGFGKDEMTYNTIIHMYGKQGQHDLAFQLYRDMKMLGRTPDAVTYTVLIDSLGKANK 341

Query: 81  YSGGIQKLMAMKADGIEPDYRIWTCFIRAASLSESSSEA 120
            +     +  M   G++P  R ++  + A + +    EA
Sbjct: 342 ITEAANVMSEMLDSGVKPTLRTYSALMCAYAKAGKQVEA 380

HSP 4 Score: 362.8 bits (930), Expect = 3.3e-97
Identity = 179/237 (75.53%), Postives = 207/237 (87.34%), Query Frame = 1


Query: 1    MMKMFRNTGNHLKAESLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATG 60
            MMK+FRN+GNH KAE LL MMK SG++PT+ATMHLLMVSYGSSG P+EAEKVL +LK  G
Sbjct: 1061 MMKIFRNSGNHCKAEKLLGMMKNSGVEPTIATMHLLMVSYGSSGQPQEAEKVLTNLKGAG 1120

Query: 61   MDLDTLPYSSVIDAYLRNRDYSGGIQKLMAMKADGIEPDYRIWTCFIRAASLSESSSEAI 120
            ++L TLPYSSVIDAY RNRDY+ GIQKL  MK +G+EPD+RIWTCFIRAASLS+ + EAI
Sbjct: 1121 LNLSTLPYSSVIDAYFRNRDYNVGIQKLEEMKKEGLEPDHRIWTCFIRAASLSQHTHEAI 1180

Query: 121  IILNALQDTGFDLPIRLLTQKSGTLILEVDQFLEKLGALEDDDAAFNFVNALEDLLWAFE 180
             +LNALQD+GFDLPIRLLT++S +L+ EVD  LE L  +E D+AAFNFVNALEDLLWAFE
Sbjct: 1181 NLLNALQDSGFDLPIRLLTERSESLVSEVDHCLEMLETVE-DNAAFNFVNALEDLLWAFE 1240

Query: 181  LRATASWVFQLAIKRSIYRQDIFRVADKDWGADFRKLSAGSALVALTLWLDHMQASS 238
            LRATASWVF LA+KRSIYR D+FRVAD+DWGADFRKLS G+ALV LTLWLDHMQ +S
Sbjct: 1241 LRATASWVFHLAVKRSIYRHDVFRVADQDWGADFRKLSGGAALVGLTLWLDHMQDAS 1296

[Close]

BLAST of MELO3C025691 vs. TAIR10
Match: AT3G18110.1 (AT3G18110.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 323.2 bits (827), Expect = 1.5e-88
Identity = 159/237 (67.09%), Postives = 198/237 (83.54%), Query Frame = 1


Query: 1    MMKMFRNTGNHLKAESLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATG 60
            MMK+ R++G+  KAE LL MMK +GI+PT+ATMHLLMVSY SSG+P+EAEKVL++LK T 
Sbjct: 1038 MMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTE 1097

Query: 61   MDLDTLPYSSVIDAYLRNRDYSGGIQKLMAMKADGIEPDYRIWTCFIRAASLSESSSEAI 120
            ++L TLPYSSVIDAYLR++DY+ GI++L+ MK +G+EPD+RIWTCF+RAAS S+   E +
Sbjct: 1098 VELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEKIEVM 1157

Query: 121  IILNALQDTGFDLPIRLLTQKSGTLILEVDQFLEKLGALEDDDAAFNFVNALEDLLWAFE 180
            ++L AL+D GFDLPIRLL  +   L+ EVD + EKL ++E D+AA NFVNAL +LLWAFE
Sbjct: 1158 LLLKALEDIGFDLPIRLLAGRPELLVSEVDGWFEKLKSIE-DNAALNFVNALLNLLWAFE 1217

Query: 181  LRATASWVFQLAIKRSIYRQDIFRVADKDWGADFRKLSAGSALVALTLWLDHMQASS 238
            LRATASWVFQL IKR I+  D+FRVADKDWGADFR+LS G+ALVALTLWLDHMQ +S
Sbjct: 1218 LRATASWVFQLGIKRGIFSLDVFRVADKDWGADFRRLSGGAALVALTLWLDHMQDAS 1273

[Close]

BLAST of MELO3C025691 vs. TAIR10
Match: AT5G18475.1 (AT5G18475.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 62.4 bits (150), Expect = 4.7e-10
Identity = 37/133 (27.82%), Postives = 65/133 (48.87%), Query Frame = 1


Query: 1   MMKMFRNTGNHLKAESLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATG 60
           M+  F   G   +A+ +L  MK++G +P V     LM  +   G  +EA++  +++K TG
Sbjct: 274 MINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTG 333

Query: 61  MDLDTLPYSSVIDAYLRNRDYSGGIQKLMAMKADGIEPDYRIWTCFIRAASLSESSSEAI 120
           + LDT+ Y+++++ + RN +    ++ L  MKA     D   +   +R  S    S EA+
Sbjct: 334 LKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEAL 393

Query: 121 IILNALQDTGFDL 134
            +L+     G  L
Sbjct: 394 QMLDQWGSEGVHL 406

[Close]

BLAST of MELO3C025691 vs. TAIR10
Match: AT2G32630.1 (AT2G32630.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 58.5 bits (140), Expect = 6.8e-09
Identity = 34/145 (23.45%), Postives = 70/145 (48.28%), Query Frame = 1


Query: 1   MMKMFRNTGNHLKAESLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATG 60
           ++ ++   GN  +A+ L V M   G+ P   T ++++ +Y   G  KEA K+  +++A G
Sbjct: 475 LIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANG 534

Query: 61  MDLDTLPYSSVIDAYLRNRDYSGGIQKLMAMKADGIEPDYRIWTCFIRAASLSESSSEAI 120
           MD D+  Y+S+I       +    ++    M   G++ +   +T  I   S +  S EA 
Sbjct: 535 MDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAF 594

Query: 121 IILNALQDTGFDLPIRLLTQKSGTL 146
            + + ++  G+ +  ++ T   G++
Sbjct: 595 GLYDEMKRKGYTIDNKVYTALIGSM 619

HSP 2 Score: 52.4 bits (124), Expect = 4.9e-07
Identity = 26/119 (21.85%), Postives = 62/119 (52.10%), Query Frame = 1


Query: 21  MKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMDLDTLPYSSVIDAYLRNRD 80
           M +SG+  TV ++ +++      G  ++++K++ +    G+  +   Y+++I+AY++ RD
Sbjct: 215 MVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRD 274

Query: 81  YSGGIQKLMAMKADGIEPDYRIWTCFIRAASLSESSSEAIIILNALQDTGFDLPIRLLT 140
           +SG    L  MK DG+  +   +T  +  +  +   S+A  + + +++ G +  + + T
Sbjct: 275 FSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYT 333

HSP 3 Score: 41.2 bits (95), Expect = 1.1e-03
Identity = 27/119 (22.69%), Postives = 49/119 (41.18%), Query Frame = 1


Query: 15  ESLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMDLDTLPYSSVIDA 74
           E +L +MK+ G+     T  LLM     +G   +AEK+ ++++  G++ D   Y+S+I  
Sbjct: 279 EGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISW 338

Query: 75  YLRNRDYSGGIQKLMAMKADGIEPDYRIWTCFIRAASLSESSSEAIIILNALQDTGFDL 134
             R  +          +   G+ P    +   I           A I++N +Q  G ++
Sbjct: 339 NCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNI 397

[Close]

BLAST of MELO3C025691 vs. TAIR10
Match: AT2G41720.1 (AT2G41720.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 56.6 bits (135), Expect = 2.6e-08
Identity = 29/116 (25.00%), Postives = 56/116 (48.28%), Query Frame = 1


Query: 13  KAESLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMDLDTLPYSSVI 72
           +A S L  M++  I  T      ++ +Y   G   EAE + N +K  G + D + Y+S++
Sbjct: 548 EAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSML 607

Query: 73  DAYLRNRDYSGGIQKLMAMKADGIEPDYRIWTCFIRAASLSESSSEAIIILNALQD 129
            AY  +  +    +  + M+A+GIEPD    +  +RA +     S   ++++ +++
Sbjct: 608 HAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMRE 663

HSP 2 Score: 36.6 bits (83), Expect = 2.8e-02
Identity = 25/107 (23.36%), Postives = 51/107 (47.66%), Query Frame = 1


Query: 13  KAESLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMDLDTLPYSSVI 72
           KA+ + +MM++    P V T + L+ +YGS+G   EA ++   ++  G+  + +   +++
Sbjct: 408 KAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL 467

Query: 73  DAYLRNRDYSGGIQKLMAMKADGIEPDYRIWT----CFIRAASLSES 116
            A  R++        L A ++ GI  +   +      +I AA L ++
Sbjct: 468 AACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKA 514

[Close]

BLAST of MELO3C025691 vs. TAIR10
Match: AT5G50280.1 (AT5G50280.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 56.2 bits (134), Expect = 3.4e-08
Identity = 32/109 (29.36%), Postives = 55/109 (50.46%), Query Frame = 1


Query: 7   NTGNHLK-AESLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMDLDT 66
           N  NH++  E L   M++ G+ P+ AT ++LM +Y     P   E +L +++  G++ + 
Sbjct: 390 NKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNV 449

Query: 67  LPYSSVIDAYLRNRDYSG-GIQKLMAMKADGIEPDYRIWTCFIRAASLS 114
             Y+ +I AY R +  S       + MK  G++P    +T  I A S+S
Sbjct: 450 KSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVS 498

HSP 2 Score: 50.1 bits (118), Expect = 2.4e-06
Identity = 26/97 (26.80%), Postives = 48/97 (49.48%), Query Frame = 1


Query: 5   FRNTGNHLKAESLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMDLD 64
           F   G +++A  ++    + G+ P+V T ++LM +Y   G   +  ++L ++ A  +  D
Sbjct: 565 FAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPD 624

Query: 65  TLPYSSVIDAYLRNRDYSGGIQKLMAMKADGIEPDYR 102
           ++ YS++I A++R RD+         M   G  PD R
Sbjct: 625 SITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPR 661

[Close]

BLAST of MELO3C025691 vs. NCBI nr
Match: gi|659127668|ref|XP_008463825.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g18110, chloroplastic [Cucumis melo])

HSP 1 Score: 464.2 bits (1193), Expect = 1.5e-127
Identity = 235/237 (99.16%), Postives = 236/237 (99.58%), Query Frame = 1


Query: 1    MMKMFRNTGNHLKAESLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATG 60
            MMKMFRNTGNHLKAESLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATG
Sbjct: 1057 MMKMFRNTGNHLKAESLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATG 1116

Query: 61   MDLDTLPYSSVIDAYLRNRDYSGGIQKLMAMKADGIEPDYRIWTCFIRAASLSESSSEAI 120
            MDLDTLPYSSVIDAYLRNRDYSGGIQKLMAMKADGIEPDYRIWTCFIRAASLSESSSEAI
Sbjct: 1117 MDLDTLPYSSVIDAYLRNRDYSGGIQKLMAMKADGIEPDYRIWTCFIRAASLSESSSEAI 1176

Query: 121  IILNALQDTGFDLPIRLLTQKSGTLILEVDQFLEKLGALEDDDAAFNFVNALEDLLWAFE 180
            IILNALQDTGFDLPIRLLTQKSGTLILEVDQFLEKLGALEDDDAAFNFVNALEDLLWAFE
Sbjct: 1177 IILNALQDTGFDLPIRLLTQKSGTLILEVDQFLEKLGALEDDDAAFNFVNALEDLLWAFE 1236

Query: 181  LRATASWVFQLAIKRSIYRQDIFRVADKDWGADFRKLSAGSALVALTLWLDHMQASS 238
            LRATASWVFQLAIKRSIYRQDIFRVADKDWGADFRKLSAGSALVALTLWLDHMQ +S
Sbjct: 1237 LRATASWVFQLAIKRSIYRQDIFRVADKDWGADFRKLSAGSALVALTLWLDHMQDAS 1293

[Close]

BLAST of MELO3C025691 vs. NCBI nr
Match: gi|659127668|ref|XP_008463825.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g18110, chloroplastic [Cucumis melo])

HSP 1 Score: 60.5 bits (145), Expect = 5.1e-06
Identity = 31/96 (32.29%), Postives = 52/96 (54.17%), Query Frame = 1


Query: 13  KAESLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMDLDTLPYSSVI 72
           +A +++  M +SG+ PT+ T   L+  YG  G P EAEK+ + +  +G+  D L YS +I
Sbjct: 475 EAGNIMTEMLDSGVKPTLRTYSALICGYGKVGKPVEAEKIFDCMLRSGIRPDYLAYSVMI 534

Query: 73  DAYLRNRDYSGGIQKLMAMKADGIEPDYRIWTCFIR 109
           D +LR  +    +     M  DG+ PD  ++   +R
Sbjct: 535 DLFLRFNETKKAMLLYKEMVCDGLTPDGALYEVMLR 570

HSP 2 Score: 30.4 bits (67), Expect = 5.6e+03
Identity = 16/61 (26.23%), Postives = 33/61 (54.10%), Query Frame = 1


Query: 28  PTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMDLDTLPYSSVIDAYLRNRDYSGGIQK 87
           P + T + ++  YG  G    AE++  +L++ G   D + Y+S++ A+ R     G ++K
Sbjct: 350 PDLWTYNAMISVYGRCGLASRAEQLFMELESKGFFPDAVTYNSLLYAFAR----EGNVEK 406

Query: 88  L 89
           +
Sbjct: 410 V 406

HSP 3 Score: 453.8 bits (1166), Expect = 2.1e-124
Identity = 230/237 (97.05%), Postives = 232/237 (97.89%), Query Frame = 1


Query: 1    MMKMFRNTGNHLKAESLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATG 60
            MMKMFRNTGNHLKAESLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATG
Sbjct: 1060 MMKMFRNTGNHLKAESLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATG 1119

Query: 61   MDLDTLPYSSVIDAYLRNRDYSGGIQKLMAMKADGIEPDYRIWTCFIRAASLSESSSEAI 120
            MDLDTLPYSSVIDAYLRN+DYS GIQKLMAMKADGIEPDYRIWTC IRAASLSESSSEAI
Sbjct: 1120 MDLDTLPYSSVIDAYLRNKDYSAGIQKLMAMKADGIEPDYRIWTCCIRAASLSESSSEAI 1179

Query: 121  IILNALQDTGFDLPIRLLTQKSGTLILEVDQFLEKLGALEDDDAAFNFVNALEDLLWAFE 180
            IILNALQDTGFDLPIRLLTQKSGTLILEVDQFLEKLGALEDDDA FNFVNALEDLLWAFE
Sbjct: 1180 IILNALQDTGFDLPIRLLTQKSGTLILEVDQFLEKLGALEDDDAGFNFVNALEDLLWAFE 1239

Query: 181  LRATASWVFQLAIKRSIYRQDIFRVADKDWGADFRKLSAGSALVALTLWLDHMQASS 238
            LRATASWVFQLAIKRSIYRQDIFRV DKDWGADFRKLSAGSALVALTLWLDHMQ +S
Sbjct: 1240 LRATASWVFQLAIKRSIYRQDIFRVFDKDWGADFRKLSAGSALVALTLWLDHMQDAS 1296

[Close]

BLAST of MELO3C025691 vs. NCBI nr
Match: gi|778714106|ref|XP_011657187.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g18110, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 61.2 bits (147), Expect = 3.0e-06
Identity = 31/96 (32.29%), Postives = 52/96 (54.17%), Query Frame = 1


Query: 13  KAESLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMDLDTLPYSSVI 72
           +A +++  M +SG+ PT+ T   L+  YG  G P EAEK  + ++ +G+  D L YS +I
Sbjct: 478 EAANIMTEMLDSGVKPTLRTYSALICGYGKVGKPVEAEKTFDCMRRSGIRPDYLAYSVMI 537

Query: 73  DAYLRNRDYSGGIQKLMAMKADGIEPDYRIWTCFIR 109
           D +LR  +    +     M  DG+ PD  ++   +R
Sbjct: 538 DLFLRFNETKKAMLLYKEMVCDGLTPDGALYEVMLR 573

HSP 2 Score: 396.0 bits (1016), Expect = 5.1e-107
Identity = 201/206 (97.57%), Postives = 203/206 (98.54%), Query Frame = 1


Query: 1    MMKMFRNTGNHLKAESLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATG 60
            MMKMFRNTGNHLKAESLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATG
Sbjct: 1060 MMKMFRNTGNHLKAESLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATG 1119

Query: 61   MDLDTLPYSSVIDAYLRNRDYSGGIQKLMAMKADGIEPDYRIWTCFIRAASLSESSSEAI 120
            MDLDTLPYSSVIDAYLRN+DYS GIQKLMAMKADGIEPDYRIWTC IRAASLSESSSEAI
Sbjct: 1120 MDLDTLPYSSVIDAYLRNKDYSAGIQKLMAMKADGIEPDYRIWTCCIRAASLSESSSEAI 1179

Query: 121  IILNALQDTGFDLPIRLLTQKSGTLILEVDQFLEKLGALEDDDAAFNFVNALEDLLWAFE 180
            IILNALQDTGFDLPIRLLTQKSGTLILEVDQFLEKLGALEDDDA FNFVNALEDLLWAFE
Sbjct: 1180 IILNALQDTGFDLPIRLLTQKSGTLILEVDQFLEKLGALEDDDAGFNFVNALEDLLWAFE 1239

Query: 181  LRATASWVFQLAIKRSIYRQDIFRVA 207
            LRATASWVFQLAIKRSIYRQDIFR+A
Sbjct: 1240 LRATASWVFQLAIKRSIYRQDIFRLA 1265

[Close]

BLAST of MELO3C025691 vs. NCBI nr
Match: gi|778714117|ref|XP_011657190.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g18110, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 61.2 bits (147), Expect = 3.0e-06
Identity = 31/96 (32.29%), Postives = 52/96 (54.17%), Query Frame = 1


Query: 13  KAESLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMDLDTLPYSSVI 72
           +A +++  M +SG+ PT+ T   L+  YG  G P EAEK  + ++ +G+  D L YS +I
Sbjct: 478 EAANIMTEMLDSGVKPTLRTYSALICGYGKVGKPVEAEKTFDCMRRSGIRPDYLAYSVMI 537

Query: 73  DAYLRNRDYSGGIQKLMAMKADGIEPDYRIWTCFIR 109
           D +LR  +    +     M  DG+ PD  ++   +R
Sbjct: 538 DLFLRFNETKKAMLLYKEMVCDGLTPDGALYEVMLR 573

HSP 2 Score: 394.0 bits (1011), Expect = 1.9e-106
Identity = 200/204 (98.04%), Postives = 201/204 (98.53%), Query Frame = 1


Query: 1    MMKMFRNTGNHLKAESLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATG 60
            MMKMFRNTGNHLKAESLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATG
Sbjct: 1060 MMKMFRNTGNHLKAESLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATG 1119

Query: 61   MDLDTLPYSSVIDAYLRNRDYSGGIQKLMAMKADGIEPDYRIWTCFIRAASLSESSSEAI 120
            MDLDTLPYSSVIDAYLRN+DYS GIQKLMAMKADGIEPDYRIWTC IRAASLSESSSEAI
Sbjct: 1120 MDLDTLPYSSVIDAYLRNKDYSAGIQKLMAMKADGIEPDYRIWTCCIRAASLSESSSEAI 1179

Query: 121  IILNALQDTGFDLPIRLLTQKSGTLILEVDQFLEKLGALEDDDAAFNFVNALEDLLWAFE 180
            IILNALQDTGFDLPIRLLTQKSGTLILEVDQFLEKLGALEDDDA FNFVNALEDLLWAFE
Sbjct: 1180 IILNALQDTGFDLPIRLLTQKSGTLILEVDQFLEKLGALEDDDAGFNFVNALEDLLWAFE 1239

Query: 181  LRATASWVFQLAIKRSIYRQDIFR 205
            LRATASWVFQLAIKRSIYRQDIFR
Sbjct: 1240 LRATASWVFQLAIKRSIYRQDIFR 1263

[Close]

BLAST of MELO3C025691 vs. NCBI nr
Match: gi|700192028|gb|KGN47232.1| (hypothetical protein Csa_6G222480 [Cucumis sativus])

HSP 1 Score: 61.2 bits (147), Expect = 3.0e-06
Identity = 31/96 (32.29%), Postives = 52/96 (54.17%), Query Frame = 1


Query: 13  KAESLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATGMDLDTLPYSSVI 72
           +A +++  M +SG+ PT+ T   L+  YG  G P EAEK  + ++ +G+  D L YS +I
Sbjct: 478 EAANIMTEMLDSGVKPTLRTYSALICGYGKVGKPVEAEKTFDCMRRSGIRPDYLAYSVMI 537

Query: 73  DAYLRNRDYSGGIQKLMAMKADGIEPDYRIWTCFIR 109
           D +LR  +    +     M  DG+ PD  ++   +R
Sbjct: 538 DLFLRFNETKKAMLLYKEMVCDGLTPDGALYEVMLR 573

HSP 2 Score: 373.6 bits (958), Expect = 2.7e-100
Identity = 186/250 (74.40%), Postives = 215/250 (86.00%), Query Frame = 1


Query: 1   MMKMFRNTGNHLKAESLLVMMKESGIDPTVATMHLLMVSYGSSGHPKEAEKVLNDLKATG 60
           MMKMFRN+GNH KAE LL +MKE+G++PT+ATMHLLMVSY  SG P+EAEKVL++LK  G
Sbjct: 615 MMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEG 674

Query: 61  MDLDTLPYSSVIDAYLRNRDYSGGIQKLMAMKADGIEPDYRIWTCFIRAASLSESSSEAI 120
           + L TLPYSSVIDAYL+N D++  IQKLM MK DG+EPD+RIWTCF+RAASLS+ +SEAI
Sbjct: 675 LPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTCFVRAASLSQHTSEAI 734

Query: 121 IILNALQDTGFDLPIRLLTQKSGTLILEVDQFLEKLGALEDDDAAFNFVNALEDLLWAFE 180
           ++L AL+DTGFDLPIRLLT+KS +L+ EVD  LEKLG LE D+AAFNFVNALEDLLWAFE
Sbjct: 735 VLLKALRDTGFDLPIRLLTEKSDSLVSEVDNCLEKLGPLE-DNAAFNFVNALEDLLWAFE 794

Query: 181 LRATASWVFQLAIKRSIYRQDIFRVADKDWGADFRKLSAGSALVALTLWLDHMQASSFTM 240
           LRATASWVFQLA+KRSIYR D+FRVA+KDWGADFRK+SAGSALV LTLWLDHMQA  F  
Sbjct: 795 LRATASWVFQLAVKRSIYRHDVFRVAEKDWGADFRKMSAGSALVGLTLWLDHMQAKYFYF 854

Query: 241 PWQIISTLSY 251
            WQ  S   Y
Sbjct: 855 -WQDASLQGY 862

The following BLAST results are available for this feature:

BLAST of MELO3C025691 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PP241_ARATH	2.6e-87	67.09	Pentatricopeptide repeat-containing protein At3g18110, chloroplastic OS=Arabidop...	[more]
PP392_ARATH	8.3e-09	27.82	Pentatricopeptide repeat-containing protein At5g18475 OS=Arabidopsis thaliana GN...	[more]
PP180_ARATH	1.2e-07	23.45	Pentatricopeptide repeat-containing protein At2g32630 OS=Arabidopsis thaliana GN...	[more]
PP199_ARATH	4.6e-07	25.00	Pentatricopeptide repeat-containing protein At2g41720 OS=Arabidopsis thaliana GN...	[more]
PP426_ARATH	6.0e-07	29.36	Pentatricopeptide repeat-containing protein At5g50280, chloroplastic OS=Arabidop...	[more]

BLAST of MELO3C025691 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFM9_CUCSA	1.3e-106	98.04	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G222480 PE=4 SV=1	[more]
A0A0A0KFM9_CUCSA	2.1e-06	32.29	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G222480 PE=4 SV=1	[more]
F6HEH6_VITVI	6.0e+02	25.71	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0039g02570 PE=4 SV=...	[more]
A5AVZ0_VITVI	6.0e+02	25.71	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005527 PE=4 SV=1	[more]
M5WF65_PRUPE	2.5e-04	25.56	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023974mg PE=4 SV=1	[more]

BLAST of MELO3C025691 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G18110.1	1.5e-88	67.09	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G18475.1	4.7e-10	27.82	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G32630.1	6.8e-09	23.45	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT2G41720.1	2.6e-08	25.00	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G50280.1	3.4e-08	29.36	Pentatricopeptide repeat (PPR) superfamily protein	[more]

BLAST of MELO3C025691 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659127668\|ref\|XP_008463825.1\|	1.5e-127	99.16	PREDICTED: pentatricopeptide repeat-containing protein At3g18110, chloroplastic ...	[more]
gi\|659127668\|ref\|XP_008463825.1\|	5.1e-06	32.29	PREDICTED: pentatricopeptide repeat-containing protein At3g18110, chloroplastic ...	[more]
gi\|778714106\|ref\|XP_011657187.1\|	3.0e-06	32.29	PREDICTED: pentatricopeptide repeat-containing protein At3g18110, chloroplastic ...	[more]
gi\|778714117\|ref\|XP_011657190.1\|	3.0e-06	32.29	PREDICTED: pentatricopeptide repeat-containing protein At3g18110, chloroplastic ...	[more]
gi\|700192028\|gb\|KGN47232.1\|	3.0e-06	32.29	hypothetical protein Csa_6G222480 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002885	Pentatricopeptide_repeat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function	GO:0008568	microtubule-severing ATPase activity
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C025691T1	MELO3C025691T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 3..41 score: 0.0075coord: 51..99 score: 2.
IPR002885	Pentatricopeptide repeat	TIGRFAMs	TIGR00756	TIGR00756	coord: 68..99 score: 4.
IPR002885	Pentatricopeptide repeat	PROFILE	PS51375	PPR	coord: 29..63 score: 8.342coord: 64..98 score: 9.438coord: 99..133 score: 5.777coord: 1..28 score: 8
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 1..131 score: 2.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C025691	Csa6G222480	Cucumber (Chinese Long) v2	cumeB433

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C025691	Cucumber (Chinese Long) v3	cucmeB438
MELO3C025691	Watermelon (97103) v2	mewmbB099
MELO3C025691	Wax gourd	mewgoB133
MELO3C025691	Cucumber (Gy14) v1	cgymeB232
MELO3C025691	Cucurbita maxima (Rimu)	cmameB497
MELO3C025691	Cucurbita maxima (Rimu)	cmameB542
MELO3C025691	Cucurbita moschata (Rifu)	cmomeB489
MELO3C025691	Cucurbita moschata (Rifu)	cmomeB531
MELO3C025691	Wild cucumber (PI 183967)	cpimeB429
MELO3C025691	Cucumber (Chinese Long) v2	cumeB435
MELO3C025691	Watermelon (Charleston Gray)	mewcgB098
MELO3C025691	Watermelon (97103) v1	mewmB111
MELO3C025691	Cucurbita pepo (Zucchini)	cpemeB267
MELO3C025691	Cucurbita pepo (Zucchini)	cpemeB679
MELO3C025691	Bottle gourd (USVL1VR-Ls)	lsimeB059
MELO3C025691	Cucumber (Gy14) v2	cgybmeB375
MELO3C025691	Silver-seed gourd	carmeB0343