MELO3C025619 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C025619
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionPutative gag-pol polyprotein
Locationchr7 : 4990769 .. 4991107 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGAGACCTCGTACTTGGGATTTCCTCTTGGAAGATCAATCCCCATGCCATTGGCTCAGTCTCTGGTAGTAAAAAGGAGTAATCCAATAGTGGTTCAAGCTAAGATCAAGCAACAAGGTGAGAATAAGAAAAGCCCTGCAAGGCTCAACCCACTAGCTATCCCCTTCTTGCATGAGCAAATTGAAGTTGGGTCTATCCCAGTAAAGATCCAGGAAGTTTTGAATGAGTACGTTGATATAATGTTTCAAAGACCTTGCCCACATGGGATTGATCATGAGATTGAACTTGTCCCAAAAGCTAAACCCCCAGCTCAAAATGCCTACCGAATGGCTTAG

mRNA sequence

ATGGATGAGACCTCGTACTTGGGATTTCCTCTTGGAAGATCAATCCCCATGCCATTGGCTCAGTCTCTGGTAGTAAAAAGGAGTAATCCAATAGTGGTTCAAGCTAAGATCAAGCAACAAGGTGAGAATAAGAAAAGCCCTGCAAGGCTCAACCCACTAGCTATCCCCTTCTTGCATGAGCAAATTGAAGTTGGGTCTATCCCAGTAAAGATCCAGGAAGTTTTGAATGAGTACGTTGATATAATGTTTCAAAGACCTTGCCCACATGGGATTGATCATGAGATTGAACTTGTCCCAAAAGCTAAACCCCCAGCTCAAAATGCCTACCGAATGGCTTAG

Coding sequence (CDS)

ATGGATGAGACCTCGTACTTGGGATTTCCTCTTGGAAGATCAATCCCCATGCCATTGGCTCAGTCTCTGGTAGTAAAAAGGAGTAATCCAATAGTGGTTCAAGCTAAGATCAAGCAACAAGGTGAGAATAAGAAAAGCCCTGCAAGGCTCAACCCACTAGCTATCCCCTTCTTGCATGAGCAAATTGAAGTTGGGTCTATCCCAGTAAAGATCCAGGAAGTTTTGAATGAGTACGTTGATATAATGTTTCAAAGACCTTGCCCACATGGGATTGATCATGAGATTGAACTTGTCCCAAAAGCTAAACCCCCAGCTCAAAATGCCTACCGAATGGCTTAG

Protein sequence

MDETSYLGFPLGRSIPMPLAQSLVVKRSNPIVVQAKIKQQGENKKSPARLNPLAIPFLHEQIEVGSIPVKIQEVLNEYVDIMFQRPCPHGIDHEIELVPKAKPPAQNAYRMA*
Homology
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BLAST of MELO3C025619 vs. NCBI nr
Match: gi|659114583|ref|XP_008457127.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103496873 [Cucumis melo])

HSP 1 Score: 64.7 bits (156), Expect = 1.2e-07
Identity = 46/113 (40.71%), Postives = 61/113 (53.98%), Query Frame = 1 

Query: 15  IPMPLAQSLVVKRSNPIVVQAKIKQQG--------ENKKSPARLNP--LAIPFLHEQIEV 74
           I MPLA+ LV+    P VVQ  ++Q          + KK  +R  P  +AIP    +   
Sbjct: 19  ILMPLAKCLVITGPTPSVVQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSG 78

Query: 75  GSIPVKIQEVLNEYVDIM---FQRPCP--HGIDHEIELVPKAKPPAQNAYRMA 113
            ++P +I  VL +Y D+M   F +  P    IDHEIELVP  KP A+NAYRMA
Sbjct: 79  ETVPTEIVRVLEKYRDVMPDSFPKSLPPRRMIDHEIELVPGTKPRAKNAYRMA 131

The following BLAST results are available for this feature:
BLAST of MELO3C025619 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659114583|ref|XP_008457127.1|1.2e-0740.71PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103496873 [Cucumis me... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C025619T1MELO3C025619T1mRNA