MELO3C025597 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C025597
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionSquamosa promoter-binding protein
Locationchr7 : 5252860 .. 5253795 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTCCAACCATTTCCACAACAAGCATCAACTCAACACCACCACCACCACCATTGGTACGTACCGCTACTGAGCGACCGAGCTGCCGGAGTTGGCAATGGATGCAAAGAGCTTTGAAGGCAAGCATAATTCCAAAGATAAGACAGTGGTCGATGACGATTTCGAATACGAGACGGAGGAGGAGGAGGTTGGTGGAGGAGGAGGAGGTAGCAATAGCAATGCTTGCAATGCATTGGGTTATTTTGACAATGAGAAAAGGAAAAAGGGGGGCAGCAGTTTCCGGCCGTGGAAAGTCTGGTGGAAGTGTCTCTTCGCCGAGTTGCCAAGCGCATAACTGTGCAGCAGATTTGAGTGAAGCAAAGAGGTATCACCGCCGCCATAAGGTCTGCGAGTTTCACTCGAAGGCAGCCATCGTCATGGTTGCTGGAATTCGCCAGCGTTTCTGCCAGCAATGCAGCAGGTATTAGATCTTCCTCAACGATATAAGCAACAACACTTTCAGTTAACATTCTTTCCTCTTTCTGTTTAGCTATTGGTAATATGTTTGTTTGTTTGTTGGGGAGTGATGATCAGGTTCCATGAGTTAACAGAGTTTGATGAAGCAAAAAGGAGCTGTCGTCGTAGGCTAGCAGGGCACAACGAACGGCGACGTAAGAACTCAGCAGAGAGCCAAGGGGAAAGCACAAGCCGCAAATCAGCTCCACAGGCGCAGTCAAAGGAAAGCCATTGCAGGCAGTTGGTGGAAGATCAAAGAAGCAGAATTCAGATGGCTCCTCCAGGAAGTTCTGGTTATAAGCACCTGCATATCAGATAAAAGGAGACTATCTATGAATCTTTGCTCTCTCTCTTCTGTCACTAGGAAATGAAAGACATTCATAGAATCCCATGTTTTTCTTGAATTTGGCTTAACCAACATCTCAGTTGGGTGCTTTGTTTTT

mRNA sequence

GCTCCAACCATTTCCACAACAAGCATCAACTCAACACCACCACCACCACCATTGGTACGTACCGCTACTGAGCGACCGAGCTGCCGGAGTTGGCAATGGATGCAAAGAGCTTTGAAGGCAAGCATAATTCCAAAGATAAGACAGTGGTCGATGACGATTTCGAATACGAGACGGAGGAGGAGGAGGTTGGTGGAGGAGGAGGAGGTAGCAATAGCAATGCTTGCAATGCATTGGGTTATTTTGACAATGAGAAAAGGAAAAAGGGGGGCAGCAGTTTCCGGCCGTGGAAAGTCTGGTGGAAGTGTCTCTTCGCCGAGTTGCCAAGCGCATAACTGTGCAGCAGATTTGAGTGAAGCAAAGAGGTATCACCGCCGCCATAAGGTCTGCGAGTTTCACTCGAAGGCAGCCATCGTCATGGTTGCTGGAATTCGCCAGCGTTTCTGCCAGCAATGCAGCAGGTTCCATGAGTTAACAGAGTTTGATGAAGCAAAAAGGAGCTGTCGTCGTAGGCTAGCAGGGCACAACGAACGGCGACGTAAGAACTCAGCAGAGAGCCAAGGGGAAAGCACAAGCCGCAAATCAGCTCCACAGGCGCAGTCAAAGGAAAGCCATTGCAGGCAGTTGGTGGAAGATCAAAGAAGCAGAATTCAGATGGCTCCTCCAGGAAGTTCTGGTTATAAGCACCTGCATATCAGATAAAAGGAGACTATCTATGAATCTTTGCTCTCTCTCTTCTGTCACTAGGAAATGAAAGACATTCATAGAATCCCATGTTTTTCTTGAATTTGGCTTAACCAACATCTCAGTTGGGTGCTTTGTTTTT

Coding sequence (CDS)

ATGCAAAGAGCTTTGAAGGCAAGCATAATTCCAAAGATAAGACAGTGGTCGATGACGATTTCGAATACGAGACGGAGGAGGAGGAGGTTGGTGGAGGAGGAGGAGGTAGCAATAGCAATGCTTGCAATGCATTGGGTTATTTTGACAATGAGAAAAGGAAAAAGGGGGGCAGCAGTTTCCGGCCGTGGAAAGTCTGGTGGAAGTGTCTCTTCGCCGAGTTGCCAAGCGCATAACTGTGCAGCAGATTTGAGTGAAGCAAAGAGGTATCACCGCCGCCATAAGGTCTGCGAGTTTCACTCGAAGGCAGCCATCGTCATGGTTGCTGGAATTCGCCAGCGTTTCTGCCAGCAATGCAGCAGGTTCCATGAGTTAACAGAGTTTGATGAAGCAAAAAGGAGCTGTCGTCGTAGGCTAGCAGGGCACAACGAACGGCGACGTAAGAACTCAGCAGAGAGCCAAGGGGAAAGCACAAGCCGCAAATCAGCTCCACAGGCGCAGTCAAAGGAAAGCCATTGCAGGCAGTTGGTGGAAGATCAAAGAAGCAGAATTCAGATGGCTCCTCCAGGAAGTTCTGGTTATAAGCACCTGCATATCAGATAA

Protein sequence

MQRALKASIIPKIRQWSMTISNTRRRRRRLVEEEEVAIAMLAMHWVILTMRKGKRGAAVSGRGKSGGSVSSPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRFCQQCSRFHELTEFDEAKRSCRRRLAGHNERRRKNSAESQGESTSRKSAPQAQSKESHCRQLVEDQRSRIQMAPPGSSGYKHLHIR*
Homology
[Close]
BLAST of MELO3C025597 vs. Swiss-Prot
Match: SPL13_ORYSJ (Squamosa promoter-binding-like protein 13 OS=Oryza sativa subsp. japonica GN=SPL13 PE=2 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 6.9e-35
Identity = 67/99 (67.68%), Postives = 77/99 (77.78%), Query Frame = 1 

Query: 54  KRGAAVSGRGKSGGSVSSPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQR 113
           +RGA  +G G   G    P CQ   C  DLSEA RY+RRHKVC+ HSK  +V+VAG+RQR
Sbjct: 90  RRGAGRAGGGAPSGGGGGPRCQVERCGVDLSEAGRYNRRHKVCQTHSKEPVVLVAGLRQR 149

Query: 114 FCQQCSRFHELTEFDEAKRSCRRRLAGHNERRRKNSAES 153
           FCQQCSRFHELTEFD+AKRSCRRRLAGHNERRRK++A++
Sbjct: 150 FCQQCSRFHELTEFDDAKRSCRRRLAGHNERRRKSAADT 188

[Close]
BLAST of MELO3C025597 vs. Swiss-Prot
Match: SBP1_ANTMA (Squamosa promoter-binding protein 1 OS=Antirrhinum majus GN=SBP1 PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.7e-33
Identity = 64/99 (64.65%), Postives = 79/99 (79.80%), Query Frame = 1 

Query: 54  KRGAAVSGRGKSGGSVSSPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQR 113
           K+  A++  GK     +  SCQ  NCAA+++ AK YHRRHKVCEFH+KA +V+ +G++QR
Sbjct: 32  KKTRALTPSGKRASGSTQRSCQVENCAAEMTNAKPYHRRHKVCEFHAKAPVVLHSGLQQR 91

Query: 114 FCQQCSRFHELTEFDEAKRSCRRRLAGHNERRRKNSAES 153
           FCQQCSRFHEL+EFDEAKRSCRRRLAGHNERRRK+S ++
Sbjct: 92  FCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKSSHDT 130

[Close]
BLAST of MELO3C025597 vs. Swiss-Prot
Match: SPL5_ARATH (Squamosa promoter-binding-like protein 5 OS=Arabidopsis thaliana GN=SPL5 PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.2e-33
Identity = 76/140 (54.29%), Postives = 92/140 (65.71%), Query Frame = 1 

Query: 62  RGKSGGSVSSPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRFCQQCSRF 121
           RG S   V S  CQ   C  +L+EAK+Y+RRH+VCE H+KA+   VAG+RQRFCQQCSRF
Sbjct: 51  RGPSTDRVPSRLCQVDRCTVNLTEAKQYYRRHRVCEVHAKASAATVAGVRQRFCQQCSRF 110

Query: 122 HELTEFDEAKRSCRRRLAGHNERRRKNSAESQGESTSRKSAPQAQSKESHCRQLVEDQ-R 181
           HEL EFDEAKRSCRRRLAGHNERRRK S +S GE + R+             QL++ Q R
Sbjct: 111 HELPEFDEAKRSCRRRLAGHNERRRKISGDSFGEGSGRR---------GFSGQLIQTQER 170

Query: 182 SRI-QMAPPGSSGYKHLHIR 200
           +R+ +  P  +S +K   IR
Sbjct: 171 NRVDRKLPMTNSSFKRPQIR 181

[Close]
BLAST of MELO3C025597 vs. Swiss-Prot
Match: SPL4_ARATH (Squamosa promoter-binding-like protein 4 OS=Arabidopsis thaliana GN=SPL4 PE=1 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.4e-32
Identity = 77/150 (51.33%), Postives = 95/150 (63.33%), Query Frame = 1 

Query: 52  KGKRGAAVSGRGKSGGSVSSPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIR 111
           +G RG+        GGS+    CQ   C AD+ EAK YHRRHKVCE H+KA+ V ++G+ 
Sbjct: 39  RGSRGSI-----NRGGSLRL--CQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLN 98

Query: 112 QRFCQQCSRFHELTEFDEAKRSCRRRLAGHNERRRKNSAES-QGESTSRKSAPQAQSKES 171
           QRFCQQCSRFH+L EFDEAKRSCRRRLAGHNERRRK+S ES  GE + R+        ++
Sbjct: 99  QRFCQQCSRFHDLQEFDEAKRSCRRRLAGHNERRRKSSGESTYGEGSGRRGINGQVVMQN 158

Query: 172 HCRQLVEDQRSRIQMA-PPGSSGYKHLHIR 200
                   +RSR++M  P  +S +K   IR
Sbjct: 159 -------QERSRVEMTLPMPNSSFKRPQIR 174

[Close]
BLAST of MELO3C025597 vs. Swiss-Prot
Match: SBP2_ANTMA (Squamosa promoter-binding protein 2 OS=Antirrhinum majus GN=SBP2 PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.9e-32
Identity = 69/135 (51.11%), Postives = 86/135 (63.70%), Query Frame = 1 

Query: 32  EEEEVAIAMLAMHWVILTMRKGKRGAAVSGRGKSG--------GSVSSPSCQAHNCAADL 91
           EEEE    ++ +++    ++K K        GKSG        G V+ P C   NC ADL
Sbjct: 35  EEEEEQERVVKVNFAESQLKKKKLNLGEGSGGKSGEKHTASGGGVVAQPCCLVENCGADL 94

Query: 92  SEAKRYHRRHKVCEFHSKAAIVMVAGIRQRFCQQCSRFHELTEFDEAKRSCRRRLAGHNE 151
              K+Y++RH+VCE H+KA +V V G+ QRFCQQCSRFH+L+EFD+ KRSCRRRLAGHNE
Sbjct: 95  RNCKKYYQRHRVCEVHAKAPVVSVEGLMQRFCQQCSRFHDLSEFDQTKRSCRRRLAGHNE 154

Query: 152 RRRKNSAESQGESTS 159
           RRRK+S ES  E  S
Sbjct: 155 RRRKSSLESHKEGRS 169

[Close]
BLAST of MELO3C025597 vs. TrEMBL
Match: A0A0A0L3D9_CUCSA (Squamosa promoter-binding protein OS=Cucumis sativus GN=Csa_4G631590 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 4.3e-76
Identity = 145/149 (97.32%), Postives = 146/149 (97.99%), Query Frame = 1 

Query: 52  KGKRGAAVSGRGKSGGSVSSPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIR 111
           K KRGAAVSGRGKSGGSVS PSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIR
Sbjct: 54  KKKRGAAVSGRGKSGGSVSLPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIR 113

Query: 112 QRFCQQCSRFHELTEFDEAKRSCRRRLAGHNERRRKNSAESQGESTSRK-SAPQAQSKES 171
           QRFCQQCSRFHELTEFDEAKRSCRRRLAGHNERRRK+SAESQGESTSRK SAPQAQSKES
Sbjct: 114 QRFCQQCSRFHELTEFDEAKRSCRRRLAGHNERRRKSSAESQGESTSRKGSAPQAQSKES 173

Query: 172 HCRQLVEDQRSRIQMAPPGSSGYKHLHIR 200
           HCRQLVEDQRSRIQMAPPGSSGYKHLHIR
Sbjct: 174 HCRQLVEDQRSRIQMAPPGSSGYKHLHIR 202

[Close]
BLAST of MELO3C025597 vs. TrEMBL
Match: I1KDS8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G238100 PE=4 SV=2)

HSP 1 Score: 195.7 bits (496), Expect = 5.5e-47
Identity = 105/181 (58.01%), Postives = 130/181 (71.82%), Query Frame = 1 

Query: 24  RRRRRRLVEEE-EVAIAMLAMHWVILTMRKGKRGAAVSG--RGKSGGS--VSSPSCQAHN 83
           R R+   VEEE E  +       V +T  + K+G   SG  RG SGGS  VS PSCQA  
Sbjct: 10  RVRKNSTVEEEVENEVEEEDESGVSITEEEKKKGVGSSGGRRGSSGGSGGVSPPSCQAER 69

Query: 84  CAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRFCQQCSRFHELTEFDEAKRSCRRRL 143
           C ADL++AKRYHRRHKVCEFHSKA +V+VAG+RQRFCQQCSRFH+L EFDE+KRSCRRRL
Sbjct: 70  CGADLTDAKRYHRRHKVCEFHSKAPVVVVAGLRQRFCQQCSRFHDLAEFDESKRSCRRRL 129

Query: 144 AGHNERRRKNSAESQGESTSRKSAPQAQSKESHCRQLVEDQRSRIQMAPPGSSGYKHLHI 200
           AGHNERRRK++ E+  E +++   P+   + +HCR  + ++R RIQM  PGSSGYK  +I
Sbjct: 130 AGHNERRRKSNPEASNEGSTKGHHPK---ETTHCR--LANERERIQMNLPGSSGYKSFNI 185

[Close]
BLAST of MELO3C025597 vs. TrEMBL
Match: A0A0B0PK17_GOSAR (Squamosa promoter-binding-like protein 5 OS=Gossypium arboreum GN=F383_09870 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 9.4e-47
Identity = 99/148 (66.89%), Postives = 111/148 (75.00%), Query Frame = 1 

Query: 54  KRGAAVSGRGKSGG--SVSSPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIR 113
           K+  A   RG SGG   V  PSCQ   C  DLS AKRYHRRHKVCE H+KA IV+VAGIR
Sbjct: 37  KKKKASGRRGSSGGVGGVLPPSCQVEKCGVDLSVAKRYHRRHKVCEIHAKAPIVVVAGIR 96

Query: 114 QRFCQQCSRFHELTEFDEAKRSCRRRLAGHNERRRKNSAESQGESTSRKSAPQAQSKESH 173
           QRFCQQCSRFHEL+EFDEAKRSCR RLAGHNERRRK+SAES  E +SRK     Q KE H
Sbjct: 97  QRFCQQCSRFHELSEFDEAKRSCRSRLAGHNERRRKSSAESSAEGSSRKGT-SPQLKEGH 156

Query: 174 CRQLVEDQRSRIQMAPPGSSGYKHLHIR 200
           CRQ V+DQR+R+ +  PG+S +K  HIR
Sbjct: 157 CRQ-VDDQRARVPITIPGNSSFKRSHIR 182

[Close]
BLAST of MELO3C025597 vs. TrEMBL
Match: A0A151RJ48_CAJCA (Squamosa promoter-binding protein 2 OS=Cajanus cajan GN=KK1_035982 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 2.1e-46
Identity = 105/197 (53.30%), Postives = 132/197 (67.01%), Query Frame = 1 

Query: 6   KASIIPKIRQWSMTISNTRRRRRRLVEEEEVAIAMLAMHWVILTMRKGKRGAAVSGRGKS 65
           K +++ K+R+ S            + EE+E  +++          +KG   ++VSGR  S
Sbjct: 9   KRALVEKVRKNSTVEEEVENE---VEEEDESGVSLTEEE-----KKKGVSSSSVSGRRGS 68

Query: 66  ---GGSVSSPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRFCQQCSRFH 125
              GG VS PSCQA  C ADLS+AKRYHRRHKVCEFHSKA +V+VAG+RQRFCQQCSRFH
Sbjct: 69  SGGGGGVSPPSCQAERCGADLSDAKRYHRRHKVCEFHSKAPVVVVAGLRQRFCQQCSRFH 128

Query: 126 ELTEFDEAKRSCRRRLAGHNERRRKNSAESQGESTSRKSAPQAQSKESHCRQLVEDQRSR 185
           +L EFDEAKRSCRRRLAGHNERRRK++ E   E +  +  P+     +HCR  + D+R R
Sbjct: 129 DLGEFDEAKRSCRRRLAGHNERRRKSNPEVGNEGSKGQHHPK---DTTHCR--LVDERGR 188

Query: 186 IQMAPPGSSGYKHLHIR 200
           IQM  PGSSGYK  +IR
Sbjct: 189 IQMNLPGSSGYKSFNIR 192

[Close]
BLAST of MELO3C025597 vs. TrEMBL
Match: A0A0K2CJN0_PLAAC (Squamosa promoter binding protein-like 3c OS=Platanus acerifolia GN=SPL3c PE=2 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 4.7e-46
Identity = 96/152 (63.16%), Postives = 112/152 (73.68%), Query Frame = 1 

Query: 48  LTMRKGKRGAAVSGRGKSGGSVSSPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMV 107
           +T   G++G+        GG VS PSCQA  C ADLS+AKRYHRRHKVCE HSKA +V+V
Sbjct: 41  VTCSAGRKGSV------GGGGVSPPSCQAEKCTADLSDAKRYHRRHKVCEQHSKAPVVIV 100

Query: 108 AGIRQRFCQQCSRFHELTEFDEAKRSCRRRLAGHNERRRKNSAESQGESTSRKSAPQAQS 167
           +G+RQRFCQQCSRFHEL+EFDEAKRSCRRRLAGHNERRRKNS ES GE +SR        
Sbjct: 101 SGLRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKNSTESHGEGSSR-------- 160

Query: 168 KESHCRQLVEDQRSRIQMAPPGSSGYKHLHIR 200
           KE+HCRQ   D   ++Q+  PG+S YKH  IR
Sbjct: 161 KENHCRQ--ADHSGKMQITLPGNSTYKHFQIR 176

[Close]
BLAST of MELO3C025597 vs. TAIR10
Match: AT3G15270.1 (AT3G15270.1 squamosa promoter binding protein-like 5)

HSP 1 Score: 143.7 bits (361), Expect = 1.3e-34
Identity = 76/140 (54.29%), Postives = 92/140 (65.71%), Query Frame = 1 

Query: 62  RGKSGGSVSSPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRFCQQCSRF 121
           RG S   V S  CQ   C  +L+EAK+Y+RRH+VCE H+KA+   VAG+RQRFCQQCSRF
Sbjct: 51  RGPSTDRVPSRLCQVDRCTVNLTEAKQYYRRHRVCEVHAKASAATVAGVRQRFCQQCSRF 110

Query: 122 HELTEFDEAKRSCRRRLAGHNERRRKNSAESQGESTSRKSAPQAQSKESHCRQLVEDQ-R 181
           HEL EFDEAKRSCRRRLAGHNERRRK S +S GE + R+             QL++ Q R
Sbjct: 111 HELPEFDEAKRSCRRRLAGHNERRRKISGDSFGEGSGRR---------GFSGQLIQTQER 170

Query: 182 SRI-QMAPPGSSGYKHLHIR 200
           +R+ +  P  +S +K   IR
Sbjct: 171 NRVDRKLPMTNSSFKRPQIR 181

[Close]
BLAST of MELO3C025597 vs. TAIR10
Match: AT1G53160.2 (AT1G53160.2 squamosa promoter binding protein-like 4)

HSP 1 Score: 141.0 bits (354), Expect = 8.1e-34
Identity = 77/150 (51.33%), Postives = 95/150 (63.33%), Query Frame = 1 

Query: 52  KGKRGAAVSGRGKSGGSVSSPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIR 111
           +G RG+        GGS+    CQ   C AD+ EAK YHRRHKVCE H+KA+ V ++G+ 
Sbjct: 39  RGSRGSI-----NRGGSLRL--CQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLN 98

Query: 112 QRFCQQCSRFHELTEFDEAKRSCRRRLAGHNERRRKNSAES-QGESTSRKSAPQAQSKES 171
           QRFCQQCSRFH+L EFDEAKRSCRRRLAGHNERRRK+S ES  GE + R+        ++
Sbjct: 99  QRFCQQCSRFHDLQEFDEAKRSCRRRLAGHNERRRKSSGESTYGEGSGRRGINGQVVMQN 158

Query: 172 HCRQLVEDQRSRIQMA-PPGSSGYKHLHIR 200
                   +RSR++M  P  +S +K   IR
Sbjct: 159 -------QERSRVEMTLPMPNSSFKRPQIR 174

[Close]
BLAST of MELO3C025597 vs. TAIR10
Match: AT3G60030.1 (AT3G60030.1 squamosa promoter-binding protein-like 12)

HSP 1 Score: 136.3 bits (342), Expect = 2.0e-32
Identity = 70/117 (59.83%), Postives = 78/117 (66.67%), Query Frame = 1 

Query: 48  LTMRKGKRGAAVSGRG----KSGGSVSSPS--CQAHNCAADLSEAKRYHRRHKVCEFHSK 107
           LT+  G  G  + G G    K GG + S +  CQ  NC ADLS+ K YHRRHKVCE HSK
Sbjct: 97  LTLNLG--GNNIEGNGVKKTKLGGGIPSRAICCQVDNCGADLSKVKDYHRRHKVCEIHSK 156

Query: 108 AAIVMVAGIRQRFCQQCSRFHELTEFDEAKRSCRRRLAGHNERRRKNSAESQGESTS 159
           A   +V GI QRFCQQCSRFH L EFDE KRSCRRRLAGHN+RRRK + ++ G  TS
Sbjct: 157 ATTALVGGIMQRFCQQCSRFHVLEEFDEGKRSCRRRLAGHNKRRRKANPDTIGNGTS 211

[Close]
BLAST of MELO3C025597 vs. TAIR10
Match: AT1G02065.1 (AT1G02065.1 squamosa promoter binding protein-like 8)

HSP 1 Score: 136.3 bits (342), Expect = 2.0e-32
Identity = 71/130 (54.62%), Postives = 86/130 (66.15%), Query Frame = 1 

Query: 63  GKSG--GSVSSPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRFCQQCSR 122
           G+SG   S+S+P CQA  C ADLS AK YHRRHKVCEFHSKA+ V+ AG+ QRFCQQCSR
Sbjct: 175 GESGMANSLSTPRCQAEGCNADLSHAKHYHRRHKVCEFHSKASTVVAAGLSQRFCQQCSR 234

Query: 123 FHELTEFDEAKRSCRRRLAGHNERRRK--NSAESQGESTSRKSAPQAQSKESHCRQLVED 182
           FH L+EFD  KRSCR+RLA HN RRRK   SA +  ++ + K+ P++ +        V+ 
Sbjct: 235 FHLLSEFDNGKRSCRKRLADHNRRRRKCHQSASATQDTGTGKTTPKSPNDSG-----VKA 294

Query: 183 QRSRIQMAPP 189
             S    APP
Sbjct: 295 SSSPSSNAPP 299

[Close]
BLAST of MELO3C025597 vs. TAIR10
Match: AT2G33810.1 (AT2G33810.1 squamosa promoter binding protein-like 3)

HSP 1 Score: 134.4 bits (337), Expect = 7.6e-32
Identity = 59/94 (62.77%), Postives = 74/94 (78.72%), Query Frame = 1 

Query: 58  AVSGRGKSGGSVSSPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRFCQQ 117
           A+  + K   + SS  CQ  +C AD+S+AK+YH+RHKVC+FH+KA  V ++G+ QRFCQQ
Sbjct: 38  ALEKKQKGKATSSSGVCQVESCTADMSKAKQYHKRHKVCQFHAKAPHVRISGLHQRFCQQ 97

Query: 118 CSRFHELTEFDEAKRSCRRRLAGHNERRRKNSAE 152
           CSRFH L+EFDEAKRSCRRRLAGHNERRRK++ +
Sbjct: 98  CSRFHALSEFDEAKRSCRRRLAGHNERRRKSTTD 131

[Close]
BLAST of MELO3C025597 vs. NCBI nr
Match: gi|659127620|ref|XP_008463797.1| (PREDICTED: squamosa promoter-binding protein 1-like [Cucumis melo])

HSP 1 Score: 298.1 bits (762), Expect = 1.1e-77
Identity = 145/151 (96.03%), Postives = 148/151 (98.01%), Query Frame = 1 

Query: 49  TMRKGKRGAAVSGRGKSGGSVSSPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVA 108
           T  + ++GAAVSGRGKSGGSVSSPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVA
Sbjct: 26  TEEEEEKGAAVSGRGKSGGSVSSPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVA 85

Query: 109 GIRQRFCQQCSRFHELTEFDEAKRSCRRRLAGHNERRRKNSAESQGESTSRKSAPQAQSK 168
           GIRQRFCQQCSRFHELTEFDEAKRSCRRRLAGHNERRRKNSAESQGESTSRKSAPQAQSK
Sbjct: 86  GIRQRFCQQCSRFHELTEFDEAKRSCRRRLAGHNERRRKNSAESQGESTSRKSAPQAQSK 145

Query: 169 ESHCRQLVEDQRSRIQMAPPGSSGYKHLHIR 200
           ESHCRQLVEDQRSRIQMAPPGSSGYKHLHIR
Sbjct: 146 ESHCRQLVEDQRSRIQMAPPGSSGYKHLHIR 176

[Close]
BLAST of MELO3C025597 vs. NCBI nr
Match: gi|449456643|ref|XP_004146058.1| (PREDICTED: squamosa promoter-binding protein 1 [Cucumis sativus])

HSP 1 Score: 292.4 bits (747), Expect = 6.2e-76
Identity = 145/149 (97.32%), Postives = 146/149 (97.99%), Query Frame = 1 

Query: 52  KGKRGAAVSGRGKSGGSVSSPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIR 111
           K KRGAAVSGRGKSGGSVS PSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIR
Sbjct: 54  KKKRGAAVSGRGKSGGSVSLPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIR 113

Query: 112 QRFCQQCSRFHELTEFDEAKRSCRRRLAGHNERRRKNSAESQGESTSRK-SAPQAQSKES 171
           QRFCQQCSRFHELTEFDEAKRSCRRRLAGHNERRRK+SAESQGESTSRK SAPQAQSKES
Sbjct: 114 QRFCQQCSRFHELTEFDEAKRSCRRRLAGHNERRRKSSAESQGESTSRKGSAPQAQSKES 173

Query: 172 HCRQLVEDQRSRIQMAPPGSSGYKHLHIR 200
           HCRQLVEDQRSRIQMAPPGSSGYKHLHIR
Sbjct: 174 HCRQLVEDQRSRIQMAPPGSSGYKHLHIR 202

[Close]
BLAST of MELO3C025597 vs. NCBI nr
Match: gi|720052366|ref|XP_010272389.1| (PREDICTED: squamosa promoter-binding protein 1-like [Nelumbo nucifera])

HSP 1 Score: 196.8 bits (499), Expect = 3.5e-47
Identity = 98/139 (70.50%), Postives = 108/139 (77.70%), Query Frame = 1 

Query: 62  RGKSGGS-VSSPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRFCQQCSR 121
           RG SGG  VS P CQA  C ADLSEAKRYHRRHKVCE HSKA +V+VAG++QRFCQQCSR
Sbjct: 52  RGSSGGGGVSPPCCQAEKCTADLSEAKRYHRRHKVCEQHSKAPVVLVAGLKQRFCQQCSR 111

Query: 122 FHELTEFDEAKRSCRRRLAGHNERRRKNSAESQGESTSRKSAPQAQSKESHCRQLVEDQR 181
           FHEL+EFDE KRSCRRRLAGHNERRRKNS ES GE +SRK     Q KE+HCRQ   DQ 
Sbjct: 112 FHELSEFDETKRSCRRRLAGHNERRRKNSTESHGEGSSRKGV-ATQLKENHCRQ--ADQS 171

Query: 182 SRIQMAPPGSSGYKHLHIR 200
            R+Q+   GS+ YKH  IR
Sbjct: 172 GRMQIPHTGSANYKHFQIR 187

[Close]
BLAST of MELO3C025597 vs. NCBI nr
Match: gi|356514675|ref|XP_003526029.1| (PREDICTED: squamosa promoter-binding protein 1-like [Glycine max])

HSP 1 Score: 195.7 bits (496), Expect = 7.9e-47
Identity = 105/181 (58.01%), Postives = 130/181 (71.82%), Query Frame = 1 

Query: 24  RRRRRRLVEEE-EVAIAMLAMHWVILTMRKGKRGAAVSG--RGKSGGS--VSSPSCQAHN 83
           R R+   VEEE E  +       V +T  + K+G   SG  RG SGGS  VS PSCQA  
Sbjct: 10  RVRKNSTVEEEVENEVEEEDESGVSITEEEKKKGVGSSGGRRGSSGGSGGVSPPSCQAER 69

Query: 84  CAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIRQRFCQQCSRFHELTEFDEAKRSCRRRL 143
           C ADL++AKRYHRRHKVCEFHSKA +V+VAG+RQRFCQQCSRFH+L EFDE+KRSCRRRL
Sbjct: 70  CGADLTDAKRYHRRHKVCEFHSKAPVVVVAGLRQRFCQQCSRFHDLAEFDESKRSCRRRL 129

Query: 144 AGHNERRRKNSAESQGESTSRKSAPQAQSKESHCRQLVEDQRSRIQMAPPGSSGYKHLHI 200
           AGHNERRRK++ E+  E +++   P+   + +HCR  + ++R RIQM  PGSSGYK  +I
Sbjct: 130 AGHNERRRKSNPEASNEGSTKGHHPK---ETTHCR--LANERERIQMNLPGSSGYKSFNI 185

[Close]
BLAST of MELO3C025597 vs. NCBI nr
Match: gi|728845336|gb|KHG24779.1| (Squamosa promoter-binding-like protein 5 [Gossypium arboreum])

HSP 1 Score: 194.9 bits (494), Expect = 1.3e-46
Identity = 99/148 (66.89%), Postives = 111/148 (75.00%), Query Frame = 1 

Query: 54  KRGAAVSGRGKSGG--SVSSPSCQAHNCAADLSEAKRYHRRHKVCEFHSKAAIVMVAGIR 113
           K+  A   RG SGG   V  PSCQ   C  DLS AKRYHRRHKVCE H+KA IV+VAGIR
Sbjct: 37  KKKKASGRRGSSGGVGGVLPPSCQVEKCGVDLSVAKRYHRRHKVCEIHAKAPIVVVAGIR 96

Query: 114 QRFCQQCSRFHELTEFDEAKRSCRRRLAGHNERRRKNSAESQGESTSRKSAPQAQSKESH 173
           QRFCQQCSRFHEL+EFDEAKRSCR RLAGHNERRRK+SAES  E +SRK     Q KE H
Sbjct: 97  QRFCQQCSRFHELSEFDEAKRSCRSRLAGHNERRRKSSAESSAEGSSRKGT-SPQLKEGH 156

Query: 174 CRQLVEDQRSRIQMAPPGSSGYKHLHIR 200
           CRQ V+DQR+R+ +  PG+S +K  HIR
Sbjct: 157 CRQ-VDDQRARVPITIPGNSSFKRSHIR 182

The following BLAST results are available for this feature:
BLAST of MELO3C025597 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SPL13_ORYSJ6.9e-3567.68Squamosa promoter-binding-like protein 13 OS=Oryza sativa subsp. japonica GN=SPL... [more]
SBP1_ANTMA1.7e-3364.65Squamosa promoter-binding protein 1 OS=Antirrhinum majus GN=SBP1 PE=2 SV=1[more]
SPL5_ARATH2.2e-3354.29Squamosa promoter-binding-like protein 5 OS=Arabidopsis thaliana GN=SPL5 PE=2 SV... [more]
SPL4_ARATH1.4e-3251.33Squamosa promoter-binding-like protein 4 OS=Arabidopsis thaliana GN=SPL4 PE=1 SV... [more]
SBP2_ANTMA1.9e-3251.11Squamosa promoter-binding protein 2 OS=Antirrhinum majus GN=SBP2 PE=2 SV=1[more]
BLAST of MELO3C025597 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L3D9_CUCSA4.3e-7697.32Squamosa promoter-binding protein OS=Cucumis sativus GN=Csa_4G631590 PE=4 SV=1[more]
I1KDS8_SOYBN5.5e-4758.01Uncharacterized protein OS=Glycine max GN=GLYMA_06G238100 PE=4 SV=2[more]
A0A0B0PK17_GOSAR9.4e-4766.89Squamosa promoter-binding-like protein 5 OS=Gossypium arboreum GN=F383_09870 PE=... [more]
A0A151RJ48_CAJCA2.1e-4653.30Squamosa promoter-binding protein 2 OS=Cajanus cajan GN=KK1_035982 PE=4 SV=1[more]
A0A0K2CJN0_PLAAC4.7e-4663.16Squamosa promoter binding protein-like 3c OS=Platanus acerifolia GN=SPL3c PE=2 S... [more]
BLAST of MELO3C025597 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G15270.11.3e-3454.29 squamosa promoter binding protein-like 5[more]
AT1G53160.28.1e-3451.33 squamosa promoter binding protein-like 4[more]
AT3G60030.12.0e-3259.83 squamosa promoter-binding protein-like 12[more]
AT1G02065.12.0e-3254.62 squamosa promoter binding protein-like 8[more]
AT2G33810.17.6e-3262.77 squamosa promoter binding protein-like 3[more]
BLAST of MELO3C025597 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659127620|ref|XP_008463797.1|1.1e-7796.03PREDICTED: squamosa promoter-binding protein 1-like [Cucumis melo][more]
gi|449456643|ref|XP_004146058.1|6.2e-7697.32PREDICTED: squamosa promoter-binding protein 1 [Cucumis sativus][more]
gi|720052366|ref|XP_010272389.1|3.5e-4770.50PREDICTED: squamosa promoter-binding protein 1-like [Nelumbo nucifera][more]
gi|356514675|ref|XP_003526029.1|7.9e-4758.01PREDICTED: squamosa promoter-binding protein 1-like [Glycine max][more]
gi|728845336|gb|KHG24779.1|1.3e-4666.89Squamosa promoter-binding-like protein 5 [Gossypium arboreum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004333SBP_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
cellular_component GO:0016020 membrane
molecular_function GO:0003677 DNA binding
molecular_function GO:0046872 metal ion binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU60831melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C025597T1MELO3C025597T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU60831MU60831transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004333Transcription factor, SBP-boxGENE3DG3DSA:4.10.1100.10coord: 67..135
score: 8.0
IPR004333Transcription factor, SBP-boxPFAMPF03110SBPcoord: 74..147
score: 2.4
IPR004333Transcription factor, SBP-boxPROFILEPS51141ZF_SBPcoord: 71..148
score: 32
IPR004333Transcription factor, SBP-boxunknownSSF103612SBT domaincoord: 72..151
score: 1.83
NoneNo IPR availablePANTHERPTHR31251FAMILY NOT NAMEDcoord: 31..199
score: 1.3
NoneNo IPR availablePANTHERPTHR31251:SF9SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4-RELATEDcoord: 31..199
score: 1.3