MELO3C025571 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C025571
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionSister chromatid cohesion PDS5 B
Locationchr12 : 13767332 .. 13768291 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAGGGAAATAAATCTGAGTACTACTAGCCAACCTGAATCAACCAATGGTCATGAAGATTTTCCTGTTAAGAGAACGAGTGTGGATGCAATGCCTGCAAAGAGCAAAAAAAGTAAAAAAAATAGTGATGCAACATCCGTTCCAGTTCCAAAACATCAAAGGTCATCATCTGACCATAGTCGTTCTAGACCCAAAAGTAAAAAGGCACATTCACCTGGCTCTCTTCAAGGAGGAGTTTCTCCACTAGAGTCAAGTGAAATTGACGTGGGGAATAACCATGATTCAGATGATGATGTATATGAGGCGAAGAAGATTGGTAGAAGCAGTGAGTCAGAATTGTTGGTCTCATGTTTGAAAAAGCCTATGGGTTCTTCCAAATCTAAAGCCAAAGGCTCAGGCAGGGGTCTCAATGATGTGGAAAATGACATTGAAGATTCCAGTGACCTTGATGTTAAGGTGGCATCCTAGCTATGTCTTCTGCTTTCTTCCCCCTTTATATATGAATAATATATGTTGCACTTATTTAGTTCCTTTATTTTTATTTTTTATTTTTTTTAACATCATGAGTATCGGGAGTCAGGACAGCTTACACCAACATTTCTTTTGTTTATCTTGCAGCATTCTAGCGTGCTGAAAAAGGTTGATAAGAACAACACAAGTAACTTAAAACCCTCTAGTGGGGCTGTTAAGAAGAGGAAACGAAGAAGCATTGCAGGGCTAGCAAAGGTATGCTGATAGTGATATTCATGTTACTCTAAGCACGTAACACGTAGAACTAATTTTAAGGTTCTTCTGTTGATATAAAAAATGCACCTTCCACATGTCATGGGATTAATATCTGAATCTTAAGTATGTGTGCCAACAGTTAGTCTTCTTTGTACCAAACGCAAGCACAAAGCTTTCTTTTGACGTATGGTGGACACCTCCAAATTTTTTTAAACAAGAGGCGAACTTTTT

mRNA sequence

ATGGTGAGGGAAATAAATCTGAGTACTACTAGCCAACCTGAATCAACCAATGGTCATGAAGATTTTCCTGTTAAGAGAACGAGTGTGGATGCAATGCCTGCAAAGAGCAAAAAAAGTAAAAAAAATAGTGATGCAACATCCGTTCCAGTTCCAAAACATCAAAGGTCATCATCTGACCATAGTCGTTCTAGACCCAAAAGTAAAAAGGCACATTCACCTGGCTCTCTTCAAGGAGGAGTTTCTCCACTAGAGTCAAGTGAAATTGACGTGGGGAATAACCATGATTCAGATGATGATGTATATGAGGCGAAGAAGATTGGTAGAAGCAGTGAGTCAGAATTGTTGGTCTCATGTTTGAAAAAGCCTATGGGTTCTTCCAAATCTAAAGCCAAAGGCTCAGGCAGGGGTCTCAATGATGTGGAAAATGACATTGAAGATTCCAGTGACCTTGATGTTAAGCATTCTAGCGTGCTGAAAAAGGTTGATAAGAACAACACAAGTAACTTAAAACCCTCTAGTGGGGCTGTTAAGAAGAGGAAACGAAGAAGCATTGCAGGGCTAGCAAAGGTATGCTGATAGTGATATTCATGTTACTCTAAGCACGTAACACGTAGAACTAATTTTAAGGTTCTTCTGTTGATATAAAAAATGCACCTTCCACATGTCATGGGATTAATATCTGAATCTTAAGTATGTGTGCCAACAGTTAGTCTTCTTTGTACCAAACGCAAGCACAAAGCTTTCTTTTGACGTATGGTGGACACCTCCAAATTTTTTTAAACAAGAGGCGAACTTTTT

Coding sequence (CDS)

ATGGTGAGGGAAATAAATCTGAGTACTACTAGCCAACCTGAATCAACCAATGGTCATGAAGATTTTCCTGTTAAGAGAACGAGTGTGGATGCAATGCCTGCAAAGAGCAAAAAAAGTAAAAAAAATAGTGATGCAACATCCGTTCCAGTTCCAAAACATCAAAGGTCATCATCTGACCATAGTCGTTCTAGACCCAAAAGTAAAAAGGCACATTCACCTGGCTCTCTTCAAGGAGGAGTTTCTCCACTAGAGTCAAGTGAAATTGACGTGGGGAATAACCATGATTCAGATGATGATGTATATGAGGCGAAGAAGATTGGTAGAAGCAGTGAGTCAGAATTGTTGGTCTCATGTTTGAAAAAGCCTATGGGTTCTTCCAAATCTAAAGCCAAAGGCTCAGGCAGGGGTCTCAATGATGTGGAAAATGACATTGAAGATTCCAGTGACCTTGATGTTAAGCATTCTAGCGTGCTGAAAAAGGTTGATAAGAACAACACAAGTAACTTAAAACCCTCTAGTGGGGCTGTTAAGAAGAGGAAACGAAGAAGCATTGCAGGGCTAGCAAAGGTATGCTGA

Protein sequence

MVREINLSTTSQPESTNGHEDFPVKRTSVDAMPAKSKKSKKNSDATSVPVPKHQRSSSDHSRSRPKSKKAHSPGSLQGGVSPLESSEIDVGNNHDSDDDVYEAKKIGRSSESELLVSCLKKPMGSSKSKAKGSGRGLNDVENDIEDSSDLDVKHSSVLKKVDKNNTSNLKPSSGAVKKRKRRSIAGLAKVC*
Homology
[Close]
BLAST of MELO3C025571 vs. TrEMBL
Match: A0A0A0LW18_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G172630 PE=4 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 9.2e-92
Identity = 176/189 (93.12%), Postives = 184/189 (97.35%), Query Frame = 1 

Query: 1    MVREINLSTTSQPESTNGHEDFPVKRTSVDAMPAKSKKSKKNSDATSVPVPKHQRSSSDH 60
            MVREINLSTTSQPESTNGHEDFPVKRTSVDAMPAKSKK +KNSDATSVPVPKHQRSSSD+
Sbjct: 1189 MVREINLSTTSQPESTNGHEDFPVKRTSVDAMPAKSKK-RKNSDATSVPVPKHQRSSSDY 1248

Query: 61   SRSRPKSKKAHSPGSLQGGVSPLESSEIDVGNNHDSDDDVYEAKKIGRSSESELLVSCLK 120
            SRSRPKSKKAHSPGSL+GGVSPLESSEIDVGNNHDSDDDVYEAKKIGRSSES+LLVSCLK
Sbjct: 1249 SRSRPKSKKAHSPGSLRGGVSPLESSEIDVGNNHDSDDDVYEAKKIGRSSESDLLVSCLK 1308

Query: 121  KPMGSSKSKAKGSGRGLNDVENDIEDSSDLDVKHSSVLKKVDKNNTSNLKPSSGAVKKRK 180
            K MGSSKSKAKGSGRG ND +ND+EDSSDLD+KHSSVLKKVDKNNT+NLK SSGAVKKRK
Sbjct: 1309 KSMGSSKSKAKGSGRGHNDEQNDLEDSSDLDIKHSSVLKKVDKNNTTNLKASSGAVKKRK 1368

Query: 181  RRSIAGLAK 190
            RRSIAGLAK
Sbjct: 1369 RRSIAGLAK 1376

[Close]
BLAST of MELO3C025571 vs. TrEMBL
Match: F6GZE1_VITVI (Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VIT_00s0920g00020 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 5.7e-25
Identity = 84/199 (42.21%), Postives = 119/199 (59.80%), Query Frame = 1 

Query: 1   MVREIN---LSTTSQPESTNGHEDFPVKRTSVDAMPAKSKKSKKNSDATSVPVPKHQRSS 60
           MVREIN   +  +S+ ES+NGHE +   R S      + KK +++++ T V VPK +RSS
Sbjct: 179 MVREINFDAMGMSSKFESSNGHE-YSSHRKSKMGQKHEKKKRRRSTEVTPVTVPKRRRSS 238

Query: 61  SDHSRSRPKSKKAHSPGSL-----QGGVSPLESSEIDVGNNHDSDDDVYEAKKIGRSSES 120
           S  S S P+S    S  +L     Q GVS  +S+++D   + DS+D V   K IG  +ES
Sbjct: 239 SAKS-SLPRSASKGSVRALRDNLHQAGVSSFQSTDMDSEVHTDSEDKVSALKNIGEPAES 298

Query: 121 ELLVSCLKKPMG-SSKSKAKGSGRGLNDVENDIEDSSDLDVKHSSVLKKVDKNNT-SNLK 180
           +LLVSC ++     SK K KGS +G ND    + +  D D++  +V  + DK +T SN+K
Sbjct: 299 DLLVSCFRRNSNFLSKRKGKGSDKGDNDEARIVGEDKDHDLRKPNVPMETDKIHTASNVK 358

Query: 181 PSSGAVKKRKRRSIAGLAK 190
             +G+ KKRKRRSIAGLAK
Sbjct: 359 SPTGSTKKRKRRSIAGLAK 375

[Close]
BLAST of MELO3C025571 vs. TrEMBL
Match: A5AJA7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030148 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 7.4e-25
Identity = 84/199 (42.21%), Postives = 119/199 (59.80%), Query Frame = 1 

Query: 1    MVREIN---LSTTSQPESTNGHEDFPVKRTSVDAMPAKSKKSKKNSDATSVPVPKHQRSS 60
            MVREIN   +  +S+ ES+NGHE +   R S      + KK +++++ T V VPK +RSS
Sbjct: 1216 MVREINFDAMGMSSKFESSNGHE-YSSHRKSKMGQKHEKKKRRRSTEVTPVTVPKRRRSS 1275

Query: 61   SDHSRSRPKSKKAHSPGSL-----QGGVSPLESSEIDVGNNHDSDDDVYEAKKIGRSSES 120
            S  S S P+S    S  +L     Q GVS  +S+++D   + DS+D V   K IG  +ES
Sbjct: 1276 SAKS-SLPRSASKGSVRALRDNLHQAGVSSFQSTDMDSEVHTDSEDKVSALKNIGEPAES 1335

Query: 121  ELLVSCLKKPMG-SSKSKAKGSGRGLNDVENDIEDSSDLDVKHSSVLKKVDKNNT-SNLK 180
            +LLVSC ++     SK K KGS +G ND    + +  D D++  +V  + DK +T SN+K
Sbjct: 1336 DLLVSCFRRNSNFLSKRKGKGSDKGDNDEARIVGEDXDHDLRKPNVPMETDKIHTASNVK 1395

Query: 181  PSSGAVKKRKRRSIAGLAK 190
              +G+ KKRKRRSIAGLAK
Sbjct: 1396 SPTGSTKKRKRRSIAGLAK 1412

[Close]
BLAST of MELO3C025571 vs. TrEMBL
Match: A0A067KKH2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08956 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.9e-20
Identity = 79/194 (40.72%), Postives = 104/194 (53.61%), Query Frame = 1 

Query: 1    MVREINLST----TSQPESTNGHEDFPVKRTSVDAMPAKSKKSKKNSDATSVPVPKHQRS 60
            MVREINL      +S+ ES+NGH+ FP +  S      +  K +K +D  SVPVPK +RS
Sbjct: 1190 MVREINLDNLGALSSKFESSNGHKHFPSETKSEPGH--QIAKKRKVTDVASVPVPKRRRS 1249

Query: 61   SSDHSRSRPKSKKAHSPGSLQGGVSPLESSEIDVGNNHDSDDDVYEAKKIGRSSESELLV 120
            +S HS  R  S    +P S  G                DS  D  + K + RS+ES+LLV
Sbjct: 1250 AS-HSAFRLSSSNLFNPLSASGD---------------DSSPDAKDKKYVRRSTESDLLV 1309

Query: 121  SCLKKPMG-SSKSKAKGSGRGLNDVENDIEDSSDLDVKHSSVLKKVDKNNTSNLKPSSGA 180
            SC++K +  SSK K K S  G N  EN+  D  +L    S     +D +N  N K  +G+
Sbjct: 1310 SCVRKNISFSSKHKGKSSDFGDNSKENEDNDDYNLKSIESGDTDNIDGSN--NFKSLTGS 1363

Query: 181  VKKRKRRSIAGLAK 190
            +KKRKRRSIAGL K
Sbjct: 1370 MKKRKRRSIAGLGK 1363

[Close]
BLAST of MELO3C025571 vs. TrEMBL
Match: A0A061GHF7_THECC (Androgen induced inhibitor of proliferation / pds5 isoform 2 OS=Theobroma cacao GN=TCM_030447 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.0e-18
Identity = 76/200 (38.00%), Postives = 107/200 (53.50%), Query Frame = 1 

Query: 1    MVREINLSTTSQP---ESTNGHEDFPVKRTSVDAMPAKSKKSKKNSDATSVPVPKHQRSS 60
            MVREINL +   P   ES+NGH+ FP K+  ++    K KK +K + A SVPVPK +RS 
Sbjct: 1186 MVREINLDSLVMPSKFESSNGHKHFPTKKAKLEQEHQKGKK-RKITGADSVPVPKRRRSL 1245

Query: 61   SDHSRSRPKSKKAHSPGSLQGG------VSPLESSEIDVGNNHDSDDDVYEAKKIGRSSE 120
              H   +     +  P    G        S  +S+E+ V   HDS D +   +K+  ++E
Sbjct: 1246 PAHGAFKISRSASTVPSRDSGDDWHQVKDSSFQSTEMKVVELHDSKDKMPTHQKLNENTE 1305

Query: 121  SELLVSCLKKPMG-SSKSKAKGSGRGLNDVENDIEDSSDLDVKHSSVLKKVDK-NNTSNL 180
            S+ LVSC+++    SSK K KGS    +D EN  ED +D +         V+K   T   
Sbjct: 1306 SDYLVSCIRRKRSVSSKGKGKGSDWVHSDEEN--EDGADDE--------NVEKLGTTIGT 1365

Query: 181  KPSSGAVKKRKRRSIAGLAK 190
            K  +G+ KK+KRRSI+GLAK
Sbjct: 1366 KSVAGSSKKQKRRSISGLAK 1374

[Close]
BLAST of MELO3C025571 vs. NCBI nr
Match: gi|659127303|ref|XP_008463634.1| (PREDICTED: LOW QUALITY PROTEIN: sister chromatid cohesion protein PDS5 homolog A [Cucumis melo])

HSP 1 Score: 358.6 bits (919), Expect = 6.8e-96
Identity = 185/189 (97.88%), Postives = 186/189 (98.41%), Query Frame = 1 

Query: 1    MVREINLSTTSQPESTNGHEDFPVKRTSVDAMPAKSKKSKKNSDATSVPVPKHQRSSSDH 60
            MVREINLSTTSQPESTNGHEDFPVKRTSVDAMPAKSKK +K  DATSVPVPKHQRSSSDH
Sbjct: 1189 MVREINLSTTSQPESTNGHEDFPVKRTSVDAMPAKSKK-RKIXDATSVPVPKHQRSSSDH 1248

Query: 61   SRSRPKSKKAHSPGSLQGGVSPLESSEIDVGNNHDSDDDVYEAKKIGRSSESELLVSCLK 120
            SRSRPKSKKAHSPGSLQGGVSPLESSEIDVGNNHDSDDDVYEAKKIGRSSESELLVSCLK
Sbjct: 1249 SRSRPKSKKAHSPGSLQGGVSPLESSEIDVGNNHDSDDDVYEAKKIGRSSESELLVSCLK 1308

Query: 121  KPMGSSKSKAKGSGRGLNDVENDIEDSSDLDVKHSSVLKKVDKNNTSNLKPSSGAVKKRK 180
            KPMGSSKSKAKGSGRGLNDVENDIEDSSDLDVKHSSVLKKVDKNNTSNLKPSSGAVKKRK
Sbjct: 1309 KPMGSSKSKAKGSGRGLNDVENDIEDSSDLDVKHSSVLKKVDKNNTSNLKPSSGAVKKRK 1368

Query: 181  RRSIAGLAK 190
            RRSIAGLAK
Sbjct: 1369 RRSIAGLAK 1376

[Close]
BLAST of MELO3C025571 vs. NCBI nr
Match: gi|778659622|ref|XP_011654767.1| (PREDICTED: sister chromatid cohesion protein PDS5 homolog A isoform X1 [Cucumis sativus])

HSP 1 Score: 344.4 bits (882), Expect = 1.3e-91
Identity = 176/189 (93.12%), Postives = 184/189 (97.35%), Query Frame = 1 

Query: 1    MVREINLSTTSQPESTNGHEDFPVKRTSVDAMPAKSKKSKKNSDATSVPVPKHQRSSSDH 60
            MVREINLSTTSQPESTNGHEDFPVKRTSVDAMPAKSKK +KNSDATSVPVPKHQRSSSD+
Sbjct: 1191 MVREINLSTTSQPESTNGHEDFPVKRTSVDAMPAKSKK-RKNSDATSVPVPKHQRSSSDY 1250

Query: 61   SRSRPKSKKAHSPGSLQGGVSPLESSEIDVGNNHDSDDDVYEAKKIGRSSESELLVSCLK 120
            SRSRPKSKKAHSPGSL+GGVSPLESSEIDVGNNHDSDDDVYEAKKIGRSSES+LLVSCLK
Sbjct: 1251 SRSRPKSKKAHSPGSLRGGVSPLESSEIDVGNNHDSDDDVYEAKKIGRSSESDLLVSCLK 1310

Query: 121  KPMGSSKSKAKGSGRGLNDVENDIEDSSDLDVKHSSVLKKVDKNNTSNLKPSSGAVKKRK 180
            K MGSSKSKAKGSGRG ND +ND+EDSSDLD+KHSSVLKKVDKNNT+NLK SSGAVKKRK
Sbjct: 1311 KSMGSSKSKAKGSGRGHNDEQNDLEDSSDLDIKHSSVLKKVDKNNTTNLKASSGAVKKRK 1370

Query: 181  RRSIAGLAK 190
            RRSIAGLAK
Sbjct: 1371 RRSIAGLAK 1378

[Close]
BLAST of MELO3C025571 vs. NCBI nr
Match: gi|700209896|gb|KGN64992.1| (hypothetical protein Csa_1G172630 [Cucumis sativus])

HSP 1 Score: 344.4 bits (882), Expect = 1.3e-91
Identity = 176/189 (93.12%), Postives = 184/189 (97.35%), Query Frame = 1 

Query: 1    MVREINLSTTSQPESTNGHEDFPVKRTSVDAMPAKSKKSKKNSDATSVPVPKHQRSSSDH 60
            MVREINLSTTSQPESTNGHEDFPVKRTSVDAMPAKSKK +KNSDATSVPVPKHQRSSSD+
Sbjct: 1189 MVREINLSTTSQPESTNGHEDFPVKRTSVDAMPAKSKK-RKNSDATSVPVPKHQRSSSDY 1248

Query: 61   SRSRPKSKKAHSPGSLQGGVSPLESSEIDVGNNHDSDDDVYEAKKIGRSSESELLVSCLK 120
            SRSRPKSKKAHSPGSL+GGVSPLESSEIDVGNNHDSDDDVYEAKKIGRSSES+LLVSCLK
Sbjct: 1249 SRSRPKSKKAHSPGSLRGGVSPLESSEIDVGNNHDSDDDVYEAKKIGRSSESDLLVSCLK 1308

Query: 121  KPMGSSKSKAKGSGRGLNDVENDIEDSSDLDVKHSSVLKKVDKNNTSNLKPSSGAVKKRK 180
            K MGSSKSKAKGSGRG ND +ND+EDSSDLD+KHSSVLKKVDKNNT+NLK SSGAVKKRK
Sbjct: 1309 KSMGSSKSKAKGSGRGHNDEQNDLEDSSDLDIKHSSVLKKVDKNNTTNLKASSGAVKKRK 1368

Query: 181  RRSIAGLAK 190
            RRSIAGLAK
Sbjct: 1369 RRSIAGLAK 1376

[Close]
BLAST of MELO3C025571 vs. NCBI nr
Match: gi|778659626|ref|XP_011654769.1| (PREDICTED: sister chromatid cohesion protein PDS5 homolog A isoform X2 [Cucumis sativus])

HSP 1 Score: 344.4 bits (882), Expect = 1.3e-91
Identity = 176/189 (93.12%), Postives = 184/189 (97.35%), Query Frame = 1 

Query: 1    MVREINLSTTSQPESTNGHEDFPVKRTSVDAMPAKSKKSKKNSDATSVPVPKHQRSSSDH 60
            MVREINLSTTSQPESTNGHEDFPVKRTSVDAMPAKSKK +KNSDATSVPVPKHQRSSSD+
Sbjct: 1189 MVREINLSTTSQPESTNGHEDFPVKRTSVDAMPAKSKK-RKNSDATSVPVPKHQRSSSDY 1248

Query: 61   SRSRPKSKKAHSPGSLQGGVSPLESSEIDVGNNHDSDDDVYEAKKIGRSSESELLVSCLK 120
            SRSRPKSKKAHSPGSL+GGVSPLESSEIDVGNNHDSDDDVYEAKKIGRSSES+LLVSCLK
Sbjct: 1249 SRSRPKSKKAHSPGSLRGGVSPLESSEIDVGNNHDSDDDVYEAKKIGRSSESDLLVSCLK 1308

Query: 121  KPMGSSKSKAKGSGRGLNDVENDIEDSSDLDVKHSSVLKKVDKNNTSNLKPSSGAVKKRK 180
            K MGSSKSKAKGSGRG ND +ND+EDSSDLD+KHSSVLKKVDKNNT+NLK SSGAVKKRK
Sbjct: 1309 KSMGSSKSKAKGSGRGHNDEQNDLEDSSDLDIKHSSVLKKVDKNNTTNLKASSGAVKKRK 1368

Query: 181  RRSIAGLAK 190
            RRSIAGLAK
Sbjct: 1369 RRSIAGLAK 1376

[Close]
BLAST of MELO3C025571 vs. NCBI nr
Match: gi|731436988|ref|XP_003635499.2| (PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like, partial [Vitis vinifera])

HSP 1 Score: 122.5 bits (306), Expect = 8.2e-25
Identity = 84/199 (42.21%), Postives = 119/199 (59.80%), Query Frame = 1 

Query: 1    MVREIN---LSTTSQPESTNGHEDFPVKRTSVDAMPAKSKKSKKNSDATSVPVPKHQRSS 60
            MVREIN   +  +S+ ES+NGHE +   R S      + KK +++++ T V VPK +RSS
Sbjct: 868  MVREINFDAMGMSSKFESSNGHE-YSSHRKSKMGQKHEKKKRRRSTEVTPVTVPKRRRSS 927

Query: 61   SDHSRSRPKSKKAHSPGSL-----QGGVSPLESSEIDVGNNHDSDDDVYEAKKIGRSSES 120
            S  S S P+S    S  +L     Q GVS  +S+++D   + DS+D V   K IG  +ES
Sbjct: 928  SAKS-SLPRSASKGSVRALRDNLHQAGVSSFQSTDMDSEVHTDSEDKVSALKNIGEPAES 987

Query: 121  ELLVSCLKKPMG-SSKSKAKGSGRGLNDVENDIEDSSDLDVKHSSVLKKVDKNNT-SNLK 180
            +LLVSC ++     SK K KGS +G ND    + +  D D++  +V  + DK +T SN+K
Sbjct: 988  DLLVSCFRRNSNFLSKRKGKGSDKGDNDEARIVGEDKDHDLRKPNVPMETDKIHTASNVK 1047

Query: 181  PSSGAVKKRKRRSIAGLAK 190
              +G+ KKRKRRSIAGLAK
Sbjct: 1048 SPTGSTKKRKRRSIAGLAK 1064

The following BLAST results are available for this feature:
BLAST of MELO3C025571 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LW18_CUCSA9.2e-9293.12Uncharacterized protein OS=Cucumis sativus GN=Csa_1G172630 PE=4 SV=1[more]
F6GZE1_VITVI5.7e-2542.21Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VIT_00s0920g000... [more]
A5AJA7_VITVI7.4e-2542.21Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030148 PE=4 SV=1[more]
A0A067KKH2_JATCU1.9e-2040.72Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08956 PE=4 SV=1[more]
A0A061GHF7_THECC1.0e-1838.00Androgen induced inhibitor of proliferation / pds5 isoform 2 OS=Theobroma cacao ... [more]
BLAST of MELO3C025571 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659127303|ref|XP_008463634.1|6.8e-9697.88PREDICTED: LOW QUALITY PROTEIN: sister chromatid cohesion protein PDS5 homolog A... [more]
gi|778659622|ref|XP_011654767.1|1.3e-9193.12PREDICTED: sister chromatid cohesion protein PDS5 homolog A isoform X1 [Cucumis ... [more]
gi|700209896|gb|KGN64992.1|1.3e-9193.12hypothetical protein Csa_1G172630 [Cucumis sativus][more]
gi|778659626|ref|XP_011654769.1|1.3e-9193.12PREDICTED: sister chromatid cohesion protein PDS5 homolog A isoform X2 [Cucumis ... [more]
gi|731436988|ref|XP_003635499.2|8.2e-2542.21PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like, partial [Vitis... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0009507 chloroplast
cellular_component GO:0005829 cytosol
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005634 nucleus
molecular_function GO:0003674 molecular_function
molecular_function GO:0005488 binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C025571T1MELO3C025571T1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C025571Csa1G172630Cucumber (Chinese Long) v2cumeB015
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C025571Cucumber (Gy14) v1cgymeB526
MELO3C025571Wild cucumber (PI 183967)cpimeB030
MELO3C025571Cucumber (Gy14) v2cgybmeB028