MELO3C025534 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C025534
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Cytosolic Fe-S cluster assembly factor
Location	chr12 : 13009023 .. 13009758 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATGACTGTAGTGGTTGTGTAACATCAGCTGAGACTGTCATGCTGGAGAAGCAAAGTTTGGATGAATTTCTATCCAACATAAACAAAGGAAAGGTTGTTATTGTCTCATTATCACCACAATCCAGAGCTTCACTTGCTGTCCATTTTGGTATCTCTCCCTTGAAGGTAAAATTCAAGTTTTGTTATATATATCTTTGCTTGTCCCATGATTGTAATTAGTTTACTGCATATATTCTTTTTGAGAGGGCGGTGGCTAGAGGGGAAATCTAATTTACCGAGGTGCTGCCTCTCGATGTTGTATTTATGTCATTAAATGCTTGTAGTGCCTTTCTCTATTAAGGCAACTAACTACGAAGTGCTTGGGGTTGGTCAGGTTTTCAAGAAACTAACGACATTTTTTAAGTCCATGGGAGTGAAAGCTATATTTGATACAAGTTGCAGTAGAGATTTAACCTTAATTGAAGCTTGCAATGAGTTCATAGCAAGGTATAGAAACAGCCAGCTAGACAATGAAGAAAAATGCAATTCATCAGTTCCTATGATATCATCAGCATGCCCAGGTATTTTCTTTTGTTTGGACGTTTGGCTATTATACTTCAATGGTAATTGTGCAAATCCCACTTTCTTTTTCGAAATAACTTGTATAGTTGAGGGTGAATGTCTTTTCTTTTCTGGTAGGACAGAGTTAGTAGGGAAATGCCACTTGTCTTTAAATGGGCCAGTTGGTCAATGA

mRNA sequence

ATGTATGACTGTAGTGGTTGTGTAACATCAGCTGAGACTGTCATGCTGGAGAAGCAAAGTTTGGATGAATTTCTATCCAACATAAACAAAGGAAAGGTTGTTATTGTCTCATTATCACCACAATCCAGAGCTTCACTTGCTGTCCATTTTGGTATCTCTCCCTTGAAGGTTTTCAAGAAACTAACGACATTTTTTAAGTCCATGGGAGTGAAAGCTATATTTGATACAAGTTGCAGTAGAGATTTAACCTTAATTGAAGCTTGCAATGAGTTCATAGCAAGGTATAGAAACAGCCAGCTAGACAATGAAGAAAAATGCAATTCATCAGTTCCTATGATATCATCAGCATGCCCAGTTGAGGGTGAATGTCTTTTCTTTTCTGGTAGGACAGAGTTAGTAGGGAAATGCCACTTGTCTTTAAATGGGCCAGTTGGTCAATGA

Coding sequence (CDS)

ATGTATGACTGTAGTGGTTGTGTAACATCAGCTGAGACTGTCATGCTGGAGAAGCAAAGTTTGGATGAATTTCTATCCAACATAAACAAAGGAAAGGTTGTTATTGTCTCATTATCACCACAATCCAGAGCTTCACTTGCTGTCCATTTTGGTATCTCTCCCTTGAAGGTTTTCAAGAAACTAACGACATTTTTTAAGTCCATGGGAGTGAAAGCTATATTTGATACAAGTTGCAGTAGAGATTTAACCTTAATTGAAGCTTGCAATGAGTTCATAGCAAGGTATAGAAACAGCCAGCTAGACAATGAAGAAAAATGCAATTCATCAGTTCCTATGATATCATCAGCATGCCCAGTTGAGGGTGAATGTCTTTTCTTTTCTGGTAGGACAGAGTTAGTAGGGAAATGCCACTTGTCTTTAAATGGGCCAGTTGGTCAATGA

Protein sequence

MYDCSGCVTSAETVMLEKQSLDEFLSNINKGKVVIVSLSPQSRASLAVHFGISPLKVFKKLTTFFKSMGVKAIFDTSCSRDLTLIEACNEFIARYRNSQLDNEEKCNSSVPMISSACPVEGECLFFSGRTELVGKCHLSLNGPVGQ*

Homology

[Close]

BLAST of MELO3C025534 vs. Swiss-Prot
Match: NAR1_ARATH (Protein NAR1 OS=Arabidopsis thaliana GN=NAR1 PE=1 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 7.8e-44
Identity = 84/115 (73.04%), Postives = 100/115 (86.96%), Query Frame = 1


Query: 4   CSGCVTSAETVMLEKQSLDEFLSNINKGKVVIVSLSPQSRASLAVHFGISPLKVFKKLTT 63
           CSGC+TSAETVMLEKQSLDEFLS ++KGK V+VS+SPQSRASLAVH+ ISPL+VFKKLTT
Sbjct: 64  CSGCITSAETVMLEKQSLDEFLSALSKGKDVVVSVSPQSRASLAVHYDISPLQVFKKLTT 123

Query: 64  FFKSMGVKAIFDTSCSRDLTLIEACNEFIARYRNSQLDNEEKCNSSVPMISSACP 119
           F KS+GVKA+FDTSCSRDL LIE+CNEF++RY+ +  D+ E   S +P++SSACP
Sbjct: 124 FLKSLGVKAVFDTSCSRDLVLIESCNEFVSRYKQANSDDGENSQSPLPVLSSACP 178

[Close]

BLAST of MELO3C025534 vs. Swiss-Prot
Match: NARF_DICDI (Probable cytosolic Fe-S cluster assembly factor narfl OS=Dictyostelium discoideum GN=narfl PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.1e-26
Identity = 61/131 (46.56%), Postives = 84/131 (64.12%), Query Frame = 1


Query: 4   CSGCVTSAETVMLEKQSLDEFLSNINKG----------KVVIVSLSPQSRASLAVHFGIS 63
           CSGC+TSAE+V++  QS+ EFL N+N            K ++++LSPQSRASLA HF IS
Sbjct: 76  CSGCITSAESVLITAQSISEFLLNVNNNNDSNNNQDEKKTIVITLSPQSRASLASHFKIS 135

Query: 64  PLKVFKKLTTFFKSMGVKAIFDTSCSRDLTLIEACNEFIARYRNSQLDNEEKCNSS---- 119
            L V KKL TFFK + +  +FD+S SRD +L+E+  EF+ARY+ + ++N     +     
Sbjct: 136 TLSVVKKLKTFFKKLNINYLFDSSFSRDFSLLESAAEFVARYKKTYINNNNDEETGKLEP 195

[Close]

BLAST of MELO3C025534 vs. Swiss-Prot
Match: NARFL_PONAB (Cytosolic Fe-S cluster assembly factor NARFL OS=Pongo abelii GN=NARFL PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 4.9e-22
Identity = 53/123 (43.09%), Postives = 79/123 (64.23%), Query Frame = 1


Query: 4   CSGCVTSAETVMLEKQSLDEFLSNINKGKVV--------IVSLSPQSRASLAVHFGISPL 63
           CSGC+TSAETV++ +QS +E    ++  K+V        +VS+SPQSRASLA  F ++P 
Sbjct: 74  CSGCITSAETVLITQQSHEELKKVLDANKMVAPSQQRLVVVSVSPQSRASLAARFQLNPT 133

Query: 64  KVFKKLTTFFKSMGVKAIFDTSCSRDLTLIEACNEFIARYRNSQLDNEEKCNSSVPMISS 119
              +KLT+FFK +GV  +FDT+ SR  +L+E+  EF+ R+R      +  C  ++P+++S
Sbjct: 134 DTARKLTSFFKKIGVHFVFDTAFSRHFSLLESQREFVRRFR-----GQADCKQALPLLAS 191

[Close]

BLAST of MELO3C025534 vs. Swiss-Prot
Match: NARFL_HUMAN (Cytosolic Fe-S cluster assembly factor NARFL OS=Homo sapiens GN=NARFL PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 4.9e-22
Identity = 53/123 (43.09%), Postives = 79/123 (64.23%), Query Frame = 1


Query: 4   CSGCVTSAETVMLEKQSLDEFLSNINKGKV--------VIVSLSPQSRASLAVHFGISPL 63
           CSGC+TSAETV++ +QS +E    ++  K+        V+VS+SPQSRASLA  F ++P 
Sbjct: 74  CSGCITSAETVLITQQSHEELKKVLDANKMAAPSQQRLVVVSVSPQSRASLAARFQLNPT 133

Query: 64  KVFKKLTTFFKSMGVKAIFDTSCSRDLTLIEACNEFIARYRNSQLDNEEKCNSSVPMISS 119
              +KLT+FFK +GV  +FDT+ SR  +L+E+  EF+ R+R      +  C  ++P+++S
Sbjct: 134 DTARKLTSFFKKIGVHFVFDTAFSRHFSLLESQREFVRRFR-----GQADCRQALPLLAS 191

[Close]

BLAST of MELO3C025534 vs. Swiss-Prot
Match: NARFL_BOVIN (Cytosolic Fe-S cluster assembly factor NARFL OS=Bos taurus GN=NARFL PE=2 SV=2)

HSP 1 Score: 103.6 bits (257), Expect = 1.9e-21
Identity = 55/123 (44.72%), Postives = 82/123 (66.67%), Query Frame = 1


Query: 4   CSGCVTSAETVMLEKQSLDEFLSNI--------NKGKVVIVSLSPQSRASLAVHFGISPL 63
           CSGCVTSAETV++ +QS +E    +        ++ K+V++S+SPQSRASLAV F ++P 
Sbjct: 74  CSGCVTSAETVLITQQSHEELRKVLGANKTAAPDQQKLVVISVSPQSRASLAVRFQLNPT 133

Query: 64  KVFKKLTTFFKSMGVKAIFDTSCSRDLTLIEACNEFIARYRNSQLDNEEKCNSSVPMISS 119
              +KLT FFK +G   +FDT+ SR+ +L+E+  EF+ R+R  Q D E+    ++P+++S
Sbjct: 134 DTARKLTAFFKKIGAHYVFDTAFSRNFSLLESQREFVRRFR-GQADPEQ----ALPVLTS 191

[Close]

BLAST of MELO3C025534 vs. TrEMBL
Match: A0A0A0LVS1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181420 PE=3 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 1.4e-55
Identity = 112/115 (97.39%), Postives = 113/115 (98.26%), Query Frame = 1


Query: 4   CSGCVTSAETVMLEKQSLDEFLSNINKGKVVIVSLSPQSRASLAVHFGISPLKVFKKLTT 63
           CSGCVTSAETVMLEKQSLDEFLSN+NKGKVVIVSLSPQSRASLAVHFGISPLKVFKKLTT
Sbjct: 199 CSGCVTSAETVMLEKQSLDEFLSNLNKGKVVIVSLSPQSRASLAVHFGISPLKVFKKLTT 258

Query: 64  FFKSMGVKAIFDTSCSRDLTLIEACNEFIARYRNSQLDNEEKCNSSVPMISSACP 119
           FFKSMGVKAIFDTSCSRDLTLIEACNEFIARYRNSQ DNEEKC SSVPMISSACP
Sbjct: 259 FFKSMGVKAIFDTSCSRDLTLIEACNEFIARYRNSQQDNEEKCKSSVPMISSACP 313

[Close]

BLAST of MELO3C025534 vs. TrEMBL
Match: A0A067GIJ3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g011877mg PE=3 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 2.1e-48
Identity = 97/115 (84.35%), Postives = 108/115 (93.91%), Query Frame = 1


Query: 4   CSGCVTSAETVMLEKQSLDEFLSNINKGKVVIVSLSPQSRASLAVHFGISPLKVFKKLTT 63
           CSGC+TSAETVMLEKQSLDEFLSNINKGK VI+SLSPQSRASLA HFGISPL+VFKKLTT
Sbjct: 62  CSGCITSAETVMLEKQSLDEFLSNINKGKAVIISLSPQSRASLAEHFGISPLQVFKKLTT 121

Query: 64  FFKSMGVKAIFDTSCSRDLTLIEACNEFIARYRNSQLDNEEKCNSSVPMISSACP 119
           F KS+GVK+IFDTSCSRDLTLIEACNEFIARY+ SQ  ++E+ NSS+PM+SSACP
Sbjct: 122 FLKSLGVKSIFDTSCSRDLTLIEACNEFIARYKQSQESDDERSNSSLPMLSSACP 176

[Close]

BLAST of MELO3C025534 vs. TrEMBL
Match: A0A067GFT3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g011877mg PE=3 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 2.1e-48
Identity = 97/115 (84.35%), Postives = 108/115 (93.91%), Query Frame = 1


Query: 4   CSGCVTSAETVMLEKQSLDEFLSNINKGKVVIVSLSPQSRASLAVHFGISPLKVFKKLTT 63
           CSGC+TSAETVMLEKQSLDEFLSNINKGK VI+SLSPQSRASLA HFGISPL+VFKKLTT
Sbjct: 62  CSGCITSAETVMLEKQSLDEFLSNINKGKAVIISLSPQSRASLAEHFGISPLQVFKKLTT 121

Query: 64  FFKSMGVKAIFDTSCSRDLTLIEACNEFIARYRNSQLDNEEKCNSSVPMISSACP 119
           F KS+GVK+IFDTSCSRDLTLIEACNEFIARY+ SQ  ++E+ NSS+PM+SSACP
Sbjct: 122 FLKSLGVKSIFDTSCSRDLTLIEACNEFIARYKQSQESDDERSNSSLPMLSSACP 176

[Close]

BLAST of MELO3C025534 vs. TrEMBL
Match: V4ULE9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015100mg PE=3 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 2.1e-48
Identity = 97/115 (84.35%), Postives = 108/115 (93.91%), Query Frame = 1


Query: 4   CSGCVTSAETVMLEKQSLDEFLSNINKGKVVIVSLSPQSRASLAVHFGISPLKVFKKLTT 63
           CSGC+TSAETVMLEKQSLDEFLSNINKGK VI+SLSPQSRASLA HFGISPL+VFKKLTT
Sbjct: 62  CSGCITSAETVMLEKQSLDEFLSNINKGKAVIISLSPQSRASLAEHFGISPLQVFKKLTT 121

Query: 64  FFKSMGVKAIFDTSCSRDLTLIEACNEFIARYRNSQLDNEEKCNSSVPMISSACP 119
           F KS+GVK+IFDTSCSRDLTLIEACNEFIARY+ SQ  ++E+ NSS+PM+SSACP
Sbjct: 122 FLKSLGVKSIFDTSCSRDLTLIEACNEFIARYKQSQESDDERSNSSLPMLSSACP 176

[Close]

BLAST of MELO3C025534 vs. TrEMBL
Match: V4UAX8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015100mg PE=3 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 2.1e-48
Identity = 97/115 (84.35%), Postives = 108/115 (93.91%), Query Frame = 1


Query: 4   CSGCVTSAETVMLEKQSLDEFLSNINKGKVVIVSLSPQSRASLAVHFGISPLKVFKKLTT 63
           CSGC+TSAETVMLEKQSLDEFLSNINKGK VI+SLSPQSRASLA HFGISPL+VFKKLTT
Sbjct: 62  CSGCITSAETVMLEKQSLDEFLSNINKGKAVIISLSPQSRASLAEHFGISPLQVFKKLTT 121

Query: 64  FFKSMGVKAIFDTSCSRDLTLIEACNEFIARYRNSQLDNEEKCNSSVPMISSACP 119
           F KS+GVK+IFDTSCSRDLTLIEACNEFIARY+ SQ  ++E+ NSS+PM+SSACP
Sbjct: 122 FLKSLGVKSIFDTSCSRDLTLIEACNEFIARYKQSQESDDERSNSSLPMLSSACP 176

[Close]

BLAST of MELO3C025534 vs. TAIR10
Match: AT4G16440.1 (AT4G16440.1 ferredoxin hydrogenases)

HSP 1 Score: 177.9 bits (450), Expect = 4.4e-45
Identity = 84/115 (73.04%), Postives = 100/115 (86.96%), Query Frame = 1


Query: 4   CSGCVTSAETVMLEKQSLDEFLSNINKGKVVIVSLSPQSRASLAVHFGISPLKVFKKLTT 63
           CSGC+TSAETVMLEKQSLDEFLS ++KGK V+VS+SPQSRASLAVH+ ISPL+VFKKLTT
Sbjct: 64  CSGCITSAETVMLEKQSLDEFLSALSKGKDVVVSVSPQSRASLAVHYDISPLQVFKKLTT 123

Query: 64  FFKSMGVKAIFDTSCSRDLTLIEACNEFIARYRNSQLDNEEKCNSSVPMISSACP 119
           F KS+GVKA+FDTSCSRDL LIE+CNEF++RY+ +  D+ E   S +P++SSACP
Sbjct: 124 FLKSLGVKAVFDTSCSRDLVLIESCNEFVSRYKQANSDDGENSQSPLPVLSSACP 178

[Close]

BLAST of MELO3C025534 vs. NCBI nr
Match: gi|659127245|ref|XP_008463602.1| (PREDICTED: cytosolic Fe-S cluster assembly factor narfl [Cucumis melo])

HSP 1 Score: 236.1 bits (601), Expect = 3.9e-59
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 1


Query: 1   MYDCSGCVTSAETVMLEKQSLDEFLSNINKGKVVIVSLSPQSRASLAVHFGISPLKVFKK 60
           MYDCSGCVTSAETVMLEKQSLDEFLSNINKGKVVIVSLSPQSRASLAVHFGISPLKVFKK
Sbjct: 1   MYDCSGCVTSAETVMLEKQSLDEFLSNINKGKVVIVSLSPQSRASLAVHFGISPLKVFKK 60

Query: 61  LTTFFKSMGVKAIFDTSCSRDLTLIEACNEFIARYRNSQLDNEEKCNSSVPMISSACP 119
           LTTFFKSMGVKAIFDTSCSRDLTLIEACNEFIARYRNSQLDNEEKCNSSVPMISSACP
Sbjct: 61  LTTFFKSMGVKAIFDTSCSRDLTLIEACNEFIARYRNSQLDNEEKCNSSVPMISSACP 118

[Close]

BLAST of MELO3C025534 vs. NCBI nr
Match: gi|778659729|ref|XP_011654936.1| (PREDICTED: cytosolic Fe-S cluster assembly factor narfl [Cucumis sativus])

HSP 1 Score: 223.8 bits (569), Expect = 2.0e-55
Identity = 112/115 (97.39%), Postives = 113/115 (98.26%), Query Frame = 1


Query: 4   CSGCVTSAETVMLEKQSLDEFLSNINKGKVVIVSLSPQSRASLAVHFGISPLKVFKKLTT 63
           CSGCVTSAETVMLEKQSLDEFLSN+NKGKVVIVSLSPQSRASLAVHFGISPLKVFKKLTT
Sbjct: 65  CSGCVTSAETVMLEKQSLDEFLSNLNKGKVVIVSLSPQSRASLAVHFGISPLKVFKKLTT 124

Query: 64  FFKSMGVKAIFDTSCSRDLTLIEACNEFIARYRNSQLDNEEKCNSSVPMISSACP 119
           FFKSMGVKAIFDTSCSRDLTLIEACNEFIARYRNSQ DNEEKC SSVPMISSACP
Sbjct: 125 FFKSMGVKAIFDTSCSRDLTLIEACNEFIARYRNSQQDNEEKCKSSVPMISSACP 179

[Close]

BLAST of MELO3C025534 vs. NCBI nr
Match: gi|700209933|gb|KGN65029.1| (hypothetical protein Csa_1G181420 [Cucumis sativus])

HSP 1 Score: 223.8 bits (569), Expect = 2.0e-55
Identity = 112/115 (97.39%), Postives = 113/115 (98.26%), Query Frame = 1


Query: 4   CSGCVTSAETVMLEKQSLDEFLSNINKGKVVIVSLSPQSRASLAVHFGISPLKVFKKLTT 63
           CSGCVTSAETVMLEKQSLDEFLSN+NKGKVVIVSLSPQSRASLAVHFGISPLKVFKKLTT
Sbjct: 199 CSGCVTSAETVMLEKQSLDEFLSNLNKGKVVIVSLSPQSRASLAVHFGISPLKVFKKLTT 258

Query: 64  FFKSMGVKAIFDTSCSRDLTLIEACNEFIARYRNSQLDNEEKCNSSVPMISSACP 119
           FFKSMGVKAIFDTSCSRDLTLIEACNEFIARYRNSQ DNEEKC SSVPMISSACP
Sbjct: 259 FFKSMGVKAIFDTSCSRDLTLIEACNEFIARYRNSQQDNEEKCKSSVPMISSACP 313

[Close]

BLAST of MELO3C025534 vs. NCBI nr
Match: gi|1009107311|ref|XP_015879081.1| (PREDICTED: protein NAR1 [Ziziphus jujuba])

HSP 1 Score: 203.8 bits (517), Expect = 2.1e-49
Identity = 96/115 (83.48%), Postives = 110/115 (95.65%), Query Frame = 1


Query: 4   CSGCVTSAETVMLEKQSLDEFLSNINKGKVVIVSLSPQSRASLAVHFGISPLKVFKKLTT 63
           CSGCVTSAET+MLEKQSLDEFLSN+NKGK VIVSLSPQSRASLAVHFGISPL+VFKKLTT
Sbjct: 67  CSGCVTSAETIMLEKQSLDEFLSNVNKGKPVIVSLSPQSRASLAVHFGISPLQVFKKLTT 126

Query: 64  FFKSMGVKAIFDTSCSRDLTLIEACNEFIARYRNSQLDNEEKCNSSVPMISSACP 119
            FKS+GVKA+FDTSCSRDL LIE CNEFIARY+ SQ++++E+CN+S+PM+SSACP
Sbjct: 127 LFKSLGVKAVFDTSCSRDLALIETCNEFIARYKKSQMNDDERCNTSLPMLSSACP 181

[Close]

BLAST of MELO3C025534 vs. NCBI nr
Match: gi|641859810|gb|KDO78500.1| (hypothetical protein CISIN_1g011877mg [Citrus sinensis])

HSP 1 Score: 199.9 bits (507), Expect = 3.1e-48
Identity = 97/115 (84.35%), Postives = 108/115 (93.91%), Query Frame = 1


Query: 4   CSGCVTSAETVMLEKQSLDEFLSNINKGKVVIVSLSPQSRASLAVHFGISPLKVFKKLTT 63
           CSGC+TSAETVMLEKQSLDEFLSNINKGK VI+SLSPQSRASLA HFGISPL+VFKKLTT
Sbjct: 62  CSGCITSAETVMLEKQSLDEFLSNINKGKAVIISLSPQSRASLAEHFGISPLQVFKKLTT 121

Query: 64  FFKSMGVKAIFDTSCSRDLTLIEACNEFIARYRNSQLDNEEKCNSSVPMISSACP 119
           F KS+GVK+IFDTSCSRDLTLIEACNEFIARY+ SQ  ++E+ NSS+PM+SSACP
Sbjct: 122 FLKSLGVKSIFDTSCSRDLTLIEACNEFIARYKQSQESDDERSNSSLPMLSSACP 176

The following BLAST results are available for this feature:

BLAST of MELO3C025534 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NAR1_ARATH	7.8e-44	73.04	Protein NAR1 OS=Arabidopsis thaliana GN=NAR1 PE=1 SV=1	[more]
NARF_DICDI	1.1e-26	46.56	Probable cytosolic Fe-S cluster assembly factor narfl OS=Dictyostelium discoideu...	[more]
NARFL_PONAB	4.9e-22	43.09	Cytosolic Fe-S cluster assembly factor NARFL OS=Pongo abelii GN=NARFL PE=2 SV=1	[more]
NARFL_HUMAN	4.9e-22	43.09	Cytosolic Fe-S cluster assembly factor NARFL OS=Homo sapiens GN=NARFL PE=1 SV=1	[more]
NARFL_BOVIN	1.9e-21	44.72	Cytosolic Fe-S cluster assembly factor NARFL OS=Bos taurus GN=NARFL PE=2 SV=2	[more]

BLAST of MELO3C025534 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVS1_CUCSA	1.4e-55	97.39	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181420 PE=3 SV=1	[more]
A0A067GIJ3_CITSI	2.1e-48	84.35	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g011877mg PE=3 SV=1	[more]
A0A067GFT3_CITSI	2.1e-48	84.35	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g011877mg PE=3 SV=1	[more]
V4ULE9_9ROSI	2.1e-48	84.35	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015100mg PE=3 SV=1	[more]
V4UAX8_9ROSI	2.1e-48	84.35	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015100mg PE=3 SV=1	[more]

BLAST of MELO3C025534 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G16440.1	4.4e-45	73.04	ferredoxin hydrogenases	[more]

BLAST of MELO3C025534 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659127245\|ref\|XP_008463602.1\|	3.9e-59	100.00	PREDICTED: cytosolic Fe-S cluster assembly factor narfl [Cucumis melo]	[more]
gi\|778659729\|ref\|XP_011654936.1\|	2.0e-55	97.39	PREDICTED: cytosolic Fe-S cluster assembly factor narfl [Cucumis sativus]	[more]
gi\|700209933\|gb\|KGN65029.1\|	2.0e-55	97.39	hypothetical protein Csa_1G181420 [Cucumis sativus]	[more]
gi\|1009107311\|ref\|XP_015879081.1\|	2.1e-49	83.48	PREDICTED: protein NAR1 [Ziziphus jujuba]	[more]
gi\|641859810\|gb\|KDO78500.1\|	3.1e-48	84.35	hypothetical protein CISIN_1g011877mg [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004108	Fe_hydrogenase_lsu_C
IPR009016	Fe_hydrogenase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0070482	response to oxygen levels
biological_process	GO:0008150	biological_process
biological_process	GO:0006508	proteolysis
cellular_component	GO:0005829	cytosol
cellular_component	GO:0009375	ferredoxin hydrogenase complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0044424	intracellular part
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008901	ferredoxin hydrogenase activity
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0051536	iron-sulfur cluster binding
molecular_function	GO:0003954	NADH dehydrogenase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C025534T1	MELO3C025534T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004108	Iron hydrogenase, large subunit, C-terminal	PFAM	PF02906	Fe_hyd_lg_C	coord: 32..119 score: 3.9
IPR009016	Iron hydrogenase	unknown	SSF53920	Fe-only hydrogenase	coord: 3..119 score: 9.55
None	No IPR available	GENE3D	G3DSA:3.40.50.1780		coord: 3..57 score: 5.2
None	No IPR available	GENE3D	G3DSA:3.40.950.10		coord: 80..118 score: 3.
None	No IPR available	PANTHER	PTHR11615	NITRATE, FROMATE, IRON DEHYDROGENASE	coord: 4..118 score: 9.8
None	No IPR available	PANTHER	PTHR11615:SF103	CYTOSOLIC FE-S CLUSTER ASSEMBLY FACTOR NARFL	coord: 4..118 score: 9.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C025534	Cla009050	Watermelon (97103) v1	mewmB168
MELO3C025534	ClCG01G010690	Watermelon (Charleston Gray)	mewcgB142
MELO3C025534	Cla97C01G010460	Watermelon (97103) v2	mewmbB144
MELO3C025534	Bhi08G000627	Wax gourd	mewgoB167
MELO3C025534	CSPI01G15700	Wild cucumber (PI 183967)	cpimeB016
MELO3C025534	Cucsa.180550	Cucumber (Gy14) v1	cgymeB326
MELO3C025534	CmaCh13G003860	Cucurbita maxima (Rimu)	cmameB199
MELO3C025534	CmaCh18G006060	Cucurbita maxima (Rimu)	cmameB366
MELO3C025534	CmoCh18G005870	Cucurbita moschata (Rifu)	cmomeB349
MELO3C025534	CmoCh13G004120	Cucurbita moschata (Rifu)	cmomeB186
MELO3C025534	Lsi02G011300	Bottle gourd (USVL1VR-Ls)	lsimeB181
MELO3C025534	Cp4.1LG09g06480	Cucurbita pepo (Zucchini)	cpemeB028
MELO3C025534	Cp4.1LG20g06480	Cucurbita pepo (Zucchini)	cpemeB472
MELO3C025534	CsGy1G015410	Cucumber (Gy14) v2	cgybmeB014
MELO3C025534	Carg25116	Silver-seed gourd	carmeB1006
MELO3C025534	Carg25608	Silver-seed gourd	carmeB0049
MELO3C025534	CsaV3_1G015810	Cucumber (Chinese Long) v3	cucmeB014
MELO3C025534	CsaV3_UNG059470	Cucumber (Chinese Long) v3	cucmeB527

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C025534	Cucumber (Chinese Long) v2	cumeB029