MELO3C025411 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C025411
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionLysine-specific demethylase 8
Locationchr6 : 29913928 .. 29914624 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCATTGGCCAGCTAGGACCAAGTGGAAGAACATGGATTACCTGCAAAAGGTTGCCGGTGGCCGTAAATTTCCAGTTGAGGTGATCTATTTATTTGTTCATTTGTTTATTATCAATACGTTGAACAGTCTTGGATTTTAAGAATATGTGTCCTAAATTGGCTATTAAAGTTTTTTTAGAAAATTAAGGACAAGTTTATTGTTACTGGAATAGCAAATATATAATTTTCCTTTTTGAGATGTTTATTTTCTTTCTTGTTGTTTATCTATTTTTATCATTTTTCTTTCTATTGTAGCTTAACTCCTACAGTCTCTCCTGCTGACTTGATATTGGAATTGATAGATTTTCCACCTTTGAACTGAAGACTTGTAAAGCTTTTATGCTTTTCAGGTTGGGAAGAACTATCTACGTCCAGAATGGAAACAAGAGCTTATTACATTTTCCGAATTTCTTAGCAGGATTCAGTCTAATGATCGTTCCGATGATATTACATATCTTGCTCAACATCCATTATTTGACCAGGTATGTACTNNNNNNNNNNNNNNNNNNNNTAAATGAGCTCAGGAAGGATATTTGTATTCCTGATTATTGTTCTATCGGGGGTGGAGAGTTAAGATCGCTTAACGCTTGGTTTGGCCCACCTGGGACAGTAACTCCTTTGCACCATGATCCGCATCACAACATATTAGCTTAG

mRNA sequence

ATGGCTCATTGGCCAGCTAGGACCAAGTGGAAGAACATGGATTACCTGCAAAAGGTTGCCGGTGGCCGTAAATTTCCAGTTGAGGTTGGGAAGAACTATCTACGTCCAGAATGGAAACAAGAGCTTATTACATTTTCCGAATTTCTTAGCAGGATTCAGTCTAATGATCGTTCCGATGATATTACATATCTTGCTCAACATCCATTATTTGACCAGCTCAGGAAGGATATTTGTATTCCTGATTATTGTTCTATCGGGGGTGGAGAGTTAAGATCGCTTAACGCTTGGTTTGGCCCACCTGGGACAGTAACTCCTTTGCACCATGATCCGCATCACAACATATTAGCTTAG

Coding sequence (CDS)

ATGGCTCATTGGCCAGCTAGGACCAAGTGGAAGAACATGGATTACCTGCAAAAGGTTGCCGGTGGCCGTAAATTTCCAGTTGAGGTTGGGAAGAACTATCTACGTCCAGAATGGAAACAAGAGCTTATTACATTTTCCGAATTTCTTAGCAGGATTCAGTCTAATGATCGTTCCGATGATATTACATATCTTGCTCAACATCCATTATTTGACCAGCTCAGGAAGGATATTTGTATTCCTGATTATTGTTCTATCGGGGGTGGAGAGTTAAGATCGCTTAACGCTTGGTTTGGCCCACCTGGGACAGTAACTCCTTTGCACCATGATCCGCATCACAACATATTAGCTTAG

Protein sequence

MAHWPARTKWKNMDYLQKVAGGRKFPVEVGKNYLRPEWKQELITFSEFLSRIQSNDRSDDITYLAQHPLFDQLRKDICIPDYCSIGGGELRSLNAWFGPPGTVTPLHHDPHHNILA*
Homology
[Close]
BLAST of MELO3C025411 vs. Swiss-Prot
Match: JMJ30_ARATH (Lysine-specific demethylase JMJ30 OS=Arabidopsis thaliana GN=JMJ30 PE=1 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 5.5e-48
Identity = 89/120 (74.17%), Postives = 98/120 (81.67%), Query Frame = 1 

Query: 1   MAHWPARTKWKNMDYLQKVAGGRKFPVEVGKNYLRPEWKQELITFSEFLSRIQSNDRSD- 60
           MAHWPARTKW ++DYL  VAG R  PVEVGKNYL  +WKQEL+TFS+FL R+++N  S  
Sbjct: 216 MAHWPARTKWNHLDYLNAVAGNRTVPVEVGKNYLCSDWKQELVTFSKFLERMRTNKSSPM 275

Query: 61  DITYLAQHPLFDQ---LRKDICIPDYCSIGGGELRSLNAWFGPPGTVTPLHHDPHHNILA 117
           + TYLAQHPLFDQ   LR DICIPDYC +GGGEL+SLNAWFGP GTVTPLHHDPHHNILA
Sbjct: 276 EPTYLAQHPLFDQINELRDDICIPDYCFVGGGELQSLNAWFGPAGTVTPLHHDPHHNILA 335

[Close]
BLAST of MELO3C025411 vs. Swiss-Prot
Match: KDM8_HUMAN (Lysine-specific demethylase 8 OS=Homo sapiens GN=KDM8 PE=1 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 5.7e-29
Identity = 62/118 (52.54%), Postives = 79/118 (66.95%), Query Frame = 1 

Query: 3   HWPARTKWKNMDYLQKVAGGRKFPVEVGKNYLRPEWKQELITFSEFLSRIQSNDRSDDIT 62
           HWP   KW +++Y+Q++AG R  PVEVG  Y   EW Q L+T +EF+S+   N+   D+ 
Sbjct: 214 HWPCMQKW-SLEYIQEIAGCRTVPVEVGSRYTDEEWSQTLMTVNEFISKYIVNE-PRDVG 273

Query: 63  YLAQHPLFDQ---LRKDICIPDYCSIGGGELR--SLNAWFGPPGTVTPLHHDPHHNIL 116
           YLAQH LFDQ   L++DI IPDYCS+G GE    ++NAWFGP GT++PLH DP  N L
Sbjct: 274 YLAQHQLFDQIPELKQDISIPDYCSLGDGEEEEITINAWFGPQGTISPLHQDPQQNFL 329

[Close]
BLAST of MELO3C025411 vs. Swiss-Prot
Match: KDM8_BOVIN (Lysine-specific demethylase 8 OS=Bos taurus GN=KDM8 PE=2 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 5.7e-29
Identity = 64/119 (53.78%), Postives = 78/119 (65.55%), Query Frame = 1 

Query: 3   HWPARTKWKNMDYLQKVAGGRKFPVEVGKNYLRPEWKQELITFSEFLSRIQSNDRSDDIT 62
           HWP   KW +++Y+Q+VAG R  PVEVG  Y   EW Q L+T +EF+S+    +   DI 
Sbjct: 204 HWPCMKKW-SLEYIQEVAGCRTVPVEVGSRYTDEEWSQTLMTVNEFISK-YIREEPKDIG 263

Query: 63  YLAQHPLFDQ---LRKDICIPDYCSIGGGELR--SLNAWFGPPGTVTPLHHDPHHNILA 117
           YLAQH LFDQ   L++DI IPDYC +G GE    ++NAWFGP GTV+PLH DP  N LA
Sbjct: 264 YLAQHQLFDQIPELKQDISIPDYCCLGDGEEEEITINAWFGPQGTVSPLHQDPQQNFLA 320

[Close]
BLAST of MELO3C025411 vs. Swiss-Prot
Match: KDM8_XENTR (Lysine-specific demethylase 8 OS=Xenopus tropicalis GN=kdm8 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.4e-27
Identity = 60/119 (50.42%), Postives = 79/119 (66.39%), Query Frame = 1 

Query: 3   HWPARTKWKNMDYLQKVAGGRKFPVEVGKNYLRPEWKQELITFSEFLSRIQSNDRSDDIT 62
           HWP   KW +++Y+Q+VAG R  PVE+G  Y   EW Q L+T +EF+++    D+ + I 
Sbjct: 241 HWPCLKKW-SVEYIQRVAGCRTVPVELGSRYTDAEWSQRLMTVNEFITK-YILDKQNGIG 300

Query: 63  YLAQHPLFDQ---LRKDICIPDYCSIG--GGELRSLNAWFGPPGTVTPLHHDPHHNILA 117
           YLAQH LF+Q   L++DICIPDYC +G    +  ++NAWFGP GTV+PLH DP  N LA
Sbjct: 301 YLAQHQLFEQIPELKEDICIPDYCCLGEASEDEITINAWFGPAGTVSPLHQDPQQNFLA 357

[Close]
BLAST of MELO3C025411 vs. Swiss-Prot
Match: KDM8_MOUSE (Lysine-specific demethylase 8 OS=Mus musculus GN=Kdm8 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.4e-27
Identity = 58/118 (49.15%), Postives = 76/118 (64.41%), Query Frame = 1 

Query: 3   HWPARTKWKNMDYLQKVAGGRKFPVEVGKNYLRPEWKQELITFSEFLSRIQSNDRSDDIT 62
           HWP   KW ++ Y+Q++AG R  PVEVG  Y   +W Q L+T  EF+ +   ++ + D+ 
Sbjct: 212 HWPCMKKW-SLQYIQEIAGCRTVPVEVGSRYTDEDWSQTLMTVDEFIQKFILSE-AKDVG 271

Query: 63  YLAQHPLFDQ---LRKDICIPDYCSIGGGELR--SLNAWFGPPGTVTPLHHDPHHNIL 116
           YLAQH LFDQ   L++DI IPDYC +G GE    ++NAWFGP GT++PLH DP  N L
Sbjct: 272 YLAQHQLFDQIPELKRDISIPDYCCLGNGEEEEITINAWFGPQGTISPLHQDPQQNFL 327

[Close]
BLAST of MELO3C025411 vs. TrEMBL
Match: A0A0A0LXH1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G612920 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 8.7e-61
Identity = 112/119 (94.12%), Postives = 113/119 (94.96%), Query Frame = 1 

Query: 1   MAHWPARTKWKNMDYLQKVAGGRKFPVEVGKNYLRPEWKQELITFSEFLSRIQSNDRSDD 60
           MAHWPARTKWKNMDYLQKVAGGR  PVEVGKNYL PEWKQELITFSEFLSRIQSNDRSDD
Sbjct: 157 MAHWPARTKWKNMDYLQKVAGGRTIPVEVGKNYLCPEWKQELITFSEFLSRIQSNDRSDD 216

Query: 61  ITYLAQHPLFDQ---LRKDICIPDYCSIGGGELRSLNAWFGPPGTVTPLHHDPHHNILA 117
           ITYLAQHPLFDQ   LRKDICIPDYCS+GGGELRSLNAWFGPPGTVTPLHHDPHHNILA
Sbjct: 217 ITYLAQHPLFDQINELRKDICIPDYCSVGGGELRSLNAWFGPPGTVTPLHHDPHHNILA 275

[Close]
BLAST of MELO3C025411 vs. TrEMBL
Match: B9GM97_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s05390g PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 2.0e-49
Identity = 97/120 (80.83%), Postives = 102/120 (85.00%), Query Frame = 1 

Query: 1   MAHWPARTKWKNMDYLQKVAGGRKFPVEVGKNYLRPEWKQELITFSEFLSRIQSNDRSDD 60
           MAHWPARTKW +MDYL++VAG R  PVEVGKNYL  EWKQELITFSEFL +IQSND S  
Sbjct: 200 MAHWPARTKWNDMDYLKRVAGDRTVPVEVGKNYLCQEWKQELITFSEFLEKIQSNDSSSA 259

Query: 61  I-TYLAQHPLFDQ---LRKDICIPDYCSIGGGELRSLNAWFGPPGTVTPLHHDPHHNILA 117
           + TYLAQH LFDQ   LRKDICIPDYC  GGGELRSLNAWFGP GTVTPLHHDPHHNILA
Sbjct: 260 VPTYLAQHQLFDQINELRKDICIPDYCCAGGGELRSLNAWFGPAGTVTPLHHDPHHNILA 319

[Close]
BLAST of MELO3C025411 vs. TrEMBL
Match: W9QPQ4_9ROSA (Lysine-specific demethylase 8 OS=Morus notabilis GN=L484_007976 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 8.5e-48
Identity = 94/121 (77.69%), Postives = 100/121 (82.64%), Query Frame = 1 

Query: 1   MAHWPARTKWKNMDYLQKVAGGRKFPVEVGKNYLRPEWKQELITFSEFLSRIQSNDRSDD 60
           MAHWPARTKW ++DYL+ VAG R  PVEVGKNYL PEWKQELITFS+FL RIQ+   S  
Sbjct: 207 MAHWPARTKWNDLDYLKTVAGDRTVPVEVGKNYLCPEWKQELITFSQFLERIQATGSSSV 266

Query: 61  I--TYLAQHPLFDQ---LRKDICIPDYCSIGGGELRSLNAWFGPPGTVTPLHHDPHHNIL 117
           +  TYLAQHPLFDQ   LR DICIPDYC  GGGELRSLNAWFGP GTVTPLHHDPHHNIL
Sbjct: 267 VPTTYLAQHPLFDQINELRNDICIPDYCFAGGGELRSLNAWFGPAGTVTPLHHDPHHNIL 326

[Close]
BLAST of MELO3C025411 vs. TrEMBL
Match: B9RI82_RICCO (Transcription factor, putative OS=Ricinus communis GN=RCOM_1576970 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 4.2e-47
Identity = 91/120 (75.83%), Postives = 100/120 (83.33%), Query Frame = 1 

Query: 1   MAHWPARTKWKNMDYLQKVAGGRKFPVEVGKNYLRPEWKQELITFSEFLSRIQSNDRSDD 60
           MAHWPARTKW ++ YL +VAG R  PVEVGKNYL  +WKQELITF++FL ++QSND S D
Sbjct: 198 MAHWPARTKWNDLGYLTRVAGDRTVPVEVGKNYLCNDWKQELITFAQFLEKLQSNDSSSD 257

Query: 61  I-TYLAQHPLFDQ---LRKDICIPDYCSIGGGELRSLNAWFGPPGTVTPLHHDPHHNILA 117
           + TYLAQHPLFDQ   LR DICIPDYC  GGGELRSLNAWFGP  TVTPLHHDPHHNILA
Sbjct: 258 VPTYLAQHPLFDQVNELRNDICIPDYCFAGGGELRSLNAWFGPAATVTPLHHDPHHNILA 317

[Close]
BLAST of MELO3C025411 vs. TrEMBL
Match: F6GU98_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g01630 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 7.2e-47
Identity = 92/120 (76.67%), Postives = 101/120 (84.17%), Query Frame = 1 

Query: 1   MAHWPARTKWKNMDYLQKVAGGRKFPVEVGKNYLRPEWKQELITFSEFLSRIQSNDRSDD 60
           M HWPART+W +MDYL++VAG R  PVEVGKNYL  +WKQELITFS+FL RIQS+D +  
Sbjct: 198 MGHWPARTRWNDMDYLKRVAGDRTVPVEVGKNYLSSDWKQELITFSQFLERIQSSDCTST 257

Query: 61  I-TYLAQHPLFDQ---LRKDICIPDYCSIGGGELRSLNAWFGPPGTVTPLHHDPHHNILA 117
           + TYLAQHPLFDQ   LRKDI IPDYC  GGGELRSLNAWFGP GTVTPLHHDPHHNILA
Sbjct: 258 LPTYLAQHPLFDQIHELRKDIFIPDYCYAGGGELRSLNAWFGPAGTVTPLHHDPHHNILA 317

[Close]
BLAST of MELO3C025411 vs. TAIR10
Match: AT3G20810.2 (AT3G20810.2 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein)

HSP 1 Score: 191.4 bits (485), Expect = 3.1e-49
Identity = 89/120 (74.17%), Postives = 98/120 (81.67%), Query Frame = 1 

Query: 1   MAHWPARTKWKNMDYLQKVAGGRKFPVEVGKNYLRPEWKQELITFSEFLSRIQSNDRSD- 60
           MAHWPARTKW ++DYL  VAG R  PVEVGKNYL  +WKQEL+TFS+FL R+++N  S  
Sbjct: 216 MAHWPARTKWNHLDYLNAVAGNRTVPVEVGKNYLCSDWKQELVTFSKFLERMRTNKSSPM 275

Query: 61  DITYLAQHPLFDQ---LRKDICIPDYCSIGGGELRSLNAWFGPPGTVTPLHHDPHHNILA 117
           + TYLAQHPLFDQ   LR DICIPDYC +GGGEL+SLNAWFGP GTVTPLHHDPHHNILA
Sbjct: 276 EPTYLAQHPLFDQINELRDDICIPDYCFVGGGELQSLNAWFGPAGTVTPLHHDPHHNILA 335

[Close]
BLAST of MELO3C025411 vs. NCBI nr
Match: gi|778663602|ref|XP_011660119.1| (PREDICTED: putative lysine-specific demethylase JMJD5 isoform X2 [Cucumis sativus])

HSP 1 Score: 240.7 bits (613), Expect = 1.3e-60
Identity = 112/119 (94.12%), Postives = 113/119 (94.96%), Query Frame = 1 

Query: 1   MAHWPARTKWKNMDYLQKVAGGRKFPVEVGKNYLRPEWKQELITFSEFLSRIQSNDRSDD 60
           MAHWPARTKWKNMDYLQKVAGGR  PVEVGKNYL PEWKQELITFSEFLSRIQSNDRSDD
Sbjct: 198 MAHWPARTKWKNMDYLQKVAGGRTIPVEVGKNYLCPEWKQELITFSEFLSRIQSNDRSDD 257

Query: 61  ITYLAQHPLFDQ---LRKDICIPDYCSIGGGELRSLNAWFGPPGTVTPLHHDPHHNILA 117
           ITYLAQHPLFDQ   LRKDICIPDYCS+GGGELRSLNAWFGPPGTVTPLHHDPHHNILA
Sbjct: 258 ITYLAQHPLFDQINELRKDICIPDYCSVGGGELRSLNAWFGPPGTVTPLHHDPHHNILA 316

[Close]
BLAST of MELO3C025411 vs. NCBI nr
Match: gi|700211372|gb|KGN66468.1| (hypothetical protein Csa_1G612920 [Cucumis sativus])

HSP 1 Score: 240.7 bits (613), Expect = 1.3e-60
Identity = 112/119 (94.12%), Postives = 113/119 (94.96%), Query Frame = 1 

Query: 1   MAHWPARTKWKNMDYLQKVAGGRKFPVEVGKNYLRPEWKQELITFSEFLSRIQSNDRSDD 60
           MAHWPARTKWKNMDYLQKVAGGR  PVEVGKNYL PEWKQELITFSEFLSRIQSNDRSDD
Sbjct: 157 MAHWPARTKWKNMDYLQKVAGGRTIPVEVGKNYLCPEWKQELITFSEFLSRIQSNDRSDD 216

Query: 61  ITYLAQHPLFDQ---LRKDICIPDYCSIGGGELRSLNAWFGPPGTVTPLHHDPHHNILA 117
           ITYLAQHPLFDQ   LRKDICIPDYCS+GGGELRSLNAWFGPPGTVTPLHHDPHHNILA
Sbjct: 217 ITYLAQHPLFDQINELRKDICIPDYCSVGGGELRSLNAWFGPPGTVTPLHHDPHHNILA 275

[Close]
BLAST of MELO3C025411 vs. NCBI nr
Match: gi|778663605|ref|XP_011660120.1| (PREDICTED: putative lysine-specific demethylase JMJD5 isoform X3 [Cucumis sativus])

HSP 1 Score: 240.7 bits (613), Expect = 1.3e-60
Identity = 112/119 (94.12%), Postives = 113/119 (94.96%), Query Frame = 1 

Query: 1   MAHWPARTKWKNMDYLQKVAGGRKFPVEVGKNYLRPEWKQELITFSEFLSRIQSNDRSDD 60
           MAHWPARTKWKNMDYLQKVAGGR  PVEVGKNYL PEWKQELITFSEFLSRIQSNDRSDD
Sbjct: 198 MAHWPARTKWKNMDYLQKVAGGRTIPVEVGKNYLCPEWKQELITFSEFLSRIQSNDRSDD 257

Query: 61  ITYLAQHPLFDQ---LRKDICIPDYCSIGGGELRSLNAWFGPPGTVTPLHHDPHHNILA 117
           ITYLAQHPLFDQ   LRKDICIPDYCS+GGGELRSLNAWFGPPGTVTPLHHDPHHNILA
Sbjct: 258 ITYLAQHPLFDQINELRKDICIPDYCSVGGGELRSLNAWFGPPGTVTPLHHDPHHNILA 316

[Close]
BLAST of MELO3C025411 vs. NCBI nr
Match: gi|778663599|ref|XP_011660118.1| (PREDICTED: putative lysine-specific demethylase JMJD5 isoform X1 [Cucumis sativus])

HSP 1 Score: 240.7 bits (613), Expect = 1.3e-60
Identity = 112/119 (94.12%), Postives = 113/119 (94.96%), Query Frame = 1 

Query: 1   MAHWPARTKWKNMDYLQKVAGGRKFPVEVGKNYLRPEWKQELITFSEFLSRIQSNDRSDD 60
           MAHWPARTKWKNMDYLQKVAGGR  PVEVGKNYL PEWKQELITFSEFLSRIQSNDRSDD
Sbjct: 198 MAHWPARTKWKNMDYLQKVAGGRTIPVEVGKNYLCPEWKQELITFSEFLSRIQSNDRSDD 257

Query: 61  ITYLAQHPLFDQ---LRKDICIPDYCSIGGGELRSLNAWFGPPGTVTPLHHDPHHNILA 117
           ITYLAQHPLFDQ   LRKDICIPDYCS+GGGELRSLNAWFGPPGTVTPLHHDPHHNILA
Sbjct: 258 ITYLAQHPLFDQINELRKDICIPDYCSVGGGELRSLNAWFGPPGTVTPLHHDPHHNILA 316

[Close]
BLAST of MELO3C025411 vs. NCBI nr
Match: gi|224057513|ref|XP_002299244.1| (hypothetical protein POPTR_0001s05390g [Populus trichocarpa])

HSP 1 Score: 203.0 bits (515), Expect = 2.9e-49
Identity = 97/120 (80.83%), Postives = 102/120 (85.00%), Query Frame = 1 

Query: 1   MAHWPARTKWKNMDYLQKVAGGRKFPVEVGKNYLRPEWKQELITFSEFLSRIQSNDRSDD 60
           MAHWPARTKW +MDYL++VAG R  PVEVGKNYL  EWKQELITFSEFL +IQSND S  
Sbjct: 200 MAHWPARTKWNDMDYLKRVAGDRTVPVEVGKNYLCQEWKQELITFSEFLEKIQSNDSSSA 259

Query: 61  I-TYLAQHPLFDQ---LRKDICIPDYCSIGGGELRSLNAWFGPPGTVTPLHHDPHHNILA 117
           + TYLAQH LFDQ   LRKDICIPDYC  GGGELRSLNAWFGP GTVTPLHHDPHHNILA
Sbjct: 260 VPTYLAQHQLFDQINELRKDICIPDYCCAGGGELRSLNAWFGPAGTVTPLHHDPHHNILA 319

The following BLAST results are available for this feature:
BLAST of MELO3C025411 vs. Swiss-Prot
Match NameE-valueIdentityDescription
JMJ30_ARATH5.5e-4874.17Lysine-specific demethylase JMJ30 OS=Arabidopsis thaliana GN=JMJ30 PE=1 SV=1[more]
KDM8_HUMAN5.7e-2952.54Lysine-specific demethylase 8 OS=Homo sapiens GN=KDM8 PE=1 SV=1[more]
KDM8_BOVIN5.7e-2953.78Lysine-specific demethylase 8 OS=Bos taurus GN=KDM8 PE=2 SV=1[more]
KDM8_XENTR2.4e-2750.42Lysine-specific demethylase 8 OS=Xenopus tropicalis GN=kdm8 PE=2 SV=1[more]
KDM8_MOUSE2.4e-2749.15Lysine-specific demethylase 8 OS=Mus musculus GN=Kdm8 PE=2 SV=1[more]
BLAST of MELO3C025411 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LXH1_CUCSA8.7e-6194.12Uncharacterized protein OS=Cucumis sativus GN=Csa_1G612920 PE=4 SV=1[more]
B9GM97_POPTR2.0e-4980.83Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s05390g PE=4 SV=1[more]
W9QPQ4_9ROSA8.5e-4877.69Lysine-specific demethylase 8 OS=Morus notabilis GN=L484_007976 PE=4 SV=1[more]
B9RI82_RICCO4.2e-4775.83Transcription factor, putative OS=Ricinus communis GN=RCOM_1576970 PE=4 SV=1[more]
F6GU98_VITVI7.2e-4776.67Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g01630 PE=4 SV=... [more]
BLAST of MELO3C025411 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G20810.23.1e-4974.17 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily prot... [more]
BLAST of MELO3C025411 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778663602|ref|XP_011660119.1|1.3e-6094.12PREDICTED: putative lysine-specific demethylase JMJD5 isoform X2 [Cucumis sativu... [more]
gi|700211372|gb|KGN66468.1|1.3e-6094.12hypothetical protein Csa_1G612920 [Cucumis sativus][more]
gi|778663605|ref|XP_011660120.1|1.3e-6094.12PREDICTED: putative lysine-specific demethylase JMJD5 isoform X3 [Cucumis sativu... [more]
gi|778663599|ref|XP_011660118.1|1.3e-6094.12PREDICTED: putative lysine-specific demethylase JMJD5 isoform X1 [Cucumis sativu... [more]
gi|224057513|ref|XP_002299244.1|2.9e-4980.83hypothetical protein POPTR_0001s05390g [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003347JmjC_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032259 methylation
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0042752 regulation of circadian rhythm
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0004597 peptide-aspartate beta-dioxygenase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C025411T1MELO3C025411T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003347JmjC domainPROFILEPS51184JMJCcoord: 56..116
score: 12
NoneNo IPR availableGENE3DG3DSA:2.60.120.650coord: 1..115
score: 3.5
NoneNo IPR availablePANTHERPTHR12461HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATEDcoord: 1..116
score: 5.2
NoneNo IPR availablePANTHERPTHR12461:SF38LYSINE-SPECIFIC DEMETHYLASE 8coord: 1..116
score: 5.2
NoneNo IPR availablePFAMPF13621Cupin_8coord: 2..115
score: 2.3
NoneNo IPR availableunknownSSF51197Clavaminate synthase-likecoord: 2..115
score: 1.79

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C025411Cucumber (Chinese Long) v2cumeB247
MELO3C025411Watermelon (Charleston Gray)mewcgB412
MELO3C025411Watermelon (97103) v1mewmB448
MELO3C025411Cucurbita pepo (Zucchini)cpemeB011
MELO3C025411Cucurbita pepo (Zucchini)cpemeB413
MELO3C025411Bottle gourd (USVL1VR-Ls)lsimeB370
MELO3C025411Cucumber (Gy14) v2cgybmeB201
MELO3C025411Silver-seed gourdcarmeB0672
MELO3C025411Silver-seed gourdcarmeB0789
MELO3C025411Cucumber (Chinese Long) v3cucmeB237
MELO3C025411Watermelon (97103) v2mewmbB426
MELO3C025411Wax gourdmewgoB499
MELO3C025411Cucumber (Gy14) v1cgymeB048
MELO3C025411Cucurbita maxima (Rimu)cmameB299
MELO3C025411Cucurbita maxima (Rimu)cmameB693
MELO3C025411Cucurbita moschata (Rifu)cmomeB283
MELO3C025411Cucurbita moschata (Rifu)cmomeB684
MELO3C025411Wild cucumber (PI 183967)cpimeB231