MELO3C025362 (gene) Melon (DHL92) v3.5.1

NameMELO3C025362
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionSimilarity to MYB-related transcription factor
Locationchr6 : 29094069 .. 29095877 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAGCACAATCGCAGCCGACGACGCCGACAAGTCCTCTTCCTACGACTATGCCAACGACACCAACATCGACACCAACGACACCGACTGGGGGTGGCGCTTCCTCCATCTTCCAATTCCACAGCCCAACCACAATGCACTCTCACTCTCCTTTATCTTCACCACATCAACATGAACCACACACTTTCACATCTTTCCCTCTCGGTCCTCCAAATTCCTTCACCTTCCATCGCCCACCCCCGATCCTCGCAGCCCCGGTCCGATTCAAGCATTTTCGAACAAACAACAACAACCACCACACTGGGGTTAATTTTTCTCATCATCATCCAACTCTTATGGTCCATTCTCCGCCGCCGCAACAGCTCTCCCGAGTGGATTCCTTCCAATTTCCGGCCATGACTTTGGCAACTACTTCTTCCTCCTCACCCCACATTCTTCATAACGCCCACTCAGGAATGGTTATTAGTAACTGCGTAGGTGGTTTAAAACAGGACCTCCCTTCATCAACCCAGTTTCACCAAATTAATGTTCCCCATACTGGGTTGACCTTTAACGATGAAAAGATCGGCTCCGGTATGAGTTTCTCAAGCGCCGGCCTGCTGGAGGATCTCTTGGATGAAGCTCAGGTATTGGCTTGTGATGCCAATTCCAATAACCCTAAACTAACTTCTCCTTCTTCTTCTTTGGTTTCCCCCGAAGAACAGCGGCTCTTTGATGGCTTCCATAAGTTGGCCCAAGACTCCAACACTTGCTTGTTTTTGAGTAACCTCTCCAACTTTCTAATTTACTTTGTTTTTTCTTTTCTTTACTTTAATGACTATCTTTAATGTTAGAATCCAACTTCTGATCTCATAATCAAGAGTAAGACCTTAATTTCATACTTAAATATTGTCCACATAACATGCATGCAAATTTATTAGATCAATTAACTTGGTATAAAGGAGAAATTTCAACTAGTGTTTCACTGATTATATTATATATTCAATTACAAAGTTGCTCATTCTACTTTCGAAAGTACTTAACAATGTCTTTTAACTTTTAATTTTGCAACTGATAGATCCTATATTGAAAATTTTATAAAACCATCTAATAAAATTCTAAGGTTTCAAAGTTTGTGTCTAGTAGGATGTGTGAAATGAAATCCTAAAGGTGAAAGTTAAAAGAAACCGTATAAACAAAAGCTTGAACTATTGCCATCAATCTAGCTGTATTTATATGTCATTTCACCCTCTAGTGTTTTTCTTTTTTAGTCCTTCTAACTTCTTTCTTTTGGTCTTTTCTTGGCTTACCTCGTACGAGCTTTTCTCCAACTCTCTTATGTACTGTTCTTTTGAAAGTTGTTAAGAATATGTCAATGTAGTTAAATACTTTTGTGCATCTACACATCCATTTAACCATTATCATCTTTCTCTAAAAACCTTTTTTTTTTCTTTTGGTAAATAATTACAGGCACAAAAACAAAGGAAGAAGGAGACGAACATGGGAGTTGTGGAAGTGAAGATTGGTCAAAACTACTAAATGCAGCAATGCCATCAAACATGCAACTTCCACAATGGTACACAAACAATAACAACAAAGAAGAACATCAACAAATTTCATCATATGGATCATCAGGACAAACGAATTCATCATCAATTTTACCAATTGAACATCATCATCATAACGACAACATTGTTGTTGGTGGTCTTGATGTTCAACATATTGCTGCTCTTTTCCCTGTCTCCACTACTGAACCACAAGACCAATCTACAAGAACCAACAACAATAATGCCTCTTGCCCTTGGGACAACTTGCCTGGAATTTGCTAA

mRNA sequence

ATGTCAGCACAATCGCAGCCGACGACGCCGACAAGTCCTCTTCCTACGACTATGCCAACGACACCAACATCGACACCAACGACACCGACTGGGGGTGGCGCTTCCTCCATCTTCCAATTCCACAGCCCAACCACAATGCACTCTCACTCTCCTTTATCTTCACCACATCAACATGAACCACACACTTTCACATCTTTCCCTCTCGGTCCTCCAAATTCCTTCACCTTCCATCGCCCACCCCCGATCCTCGCAGCCCCGGTCCGATTCAAGCATTTTCGAACAAACAACAACAACCACCACACTGGGGTTAATTTTTCTCATCATCATCCAACTCTTATGGTCCATTCTCCGCCGCCGCAACAGCTCTCCCGAGTGGATTCCTTCCAATTTCCGGCCATGACTTTGGCAACTACTTCTTCCTCCTCACCCCACATTCTTCATAACGCCCACTCAGGAATGGTTATTAGTAACTGCGTAGGTGGTTTAAAACAGGACCTCCCTTCATCAACCCAGTTTCACCAAATTAATGTTCCCCATACTGGGTTGACCTTTAACGATGAAAAGATCGGCTCCGGTATGAGTTTCTCAAGCGCCGGCCTGCTGGAGGATCTCTTGGATGAAGCTCAGGTATTGGCTTGTGATGCCAATTCCAATAACCCTAAACTAACTTCTCCTTCTTCTTCTTTGGTTTCCCCCGAAGAACAGCGGCTCTTTGATGGCTTCCATAAGTTGGCCCAAGACTCCAACACTTGCTTGTTTTTGAGCACAAAAACAAAGGAAGAAGGAGACGAACATGGGAGTTGTGGAAGTGAAGATTGGTCAAAACTACTAAATGCAGCAATGCCATCAAACATGCAACTTCCACAATGGTACACAAACAATAACAACAAAGAAGAACATCAACAAATTTCATCATATGGATCATCAGGACAAACGAATTCATCATCAATTTTACCAATTGAACATCATCATCATAACGACAACATTGTTGTTGGTGGTCTTGATGTTCAACATATTGCTGCTCTTTTCCCTGTCTCCACTACTGAACCACAAGACCAATCTACAAGAACCAACAACAATAATGCCTCTTGCCCTTGGGACAACTTGCCTGGAATTTGCTAA

Coding sequence (CDS)

ATGTCAGCACAATCGCAGCCGACGACGCCGACAAGTCCTCTTCCTACGACTATGCCAACGACACCAACATCGACACCAACGACACCGACTGGGGGTGGCGCTTCCTCCATCTTCCAATTCCACAGCCCAACCACAATGCACTCTCACTCTCCTTTATCTTCACCACATCAACATGAACCACACACTTTCACATCTTTCCCTCTCGGTCCTCCAAATTCCTTCACCTTCCATCGCCCACCCCCGATCCTCGCAGCCCCGGTCCGATTCAAGCATTTTCGAACAAACAACAACAACCACCACACTGGGGTTAATTTTTCTCATCATCATCCAACTCTTATGGTCCATTCTCCGCCGCCGCAACAGCTCTCCCGAGTGGATTCCTTCCAATTTCCGGCCATGACTTTGGCAACTACTTCTTCCTCCTCACCCCACATTCTTCATAACGCCCACTCAGGAATGGTTATTAGTAACTGCGTAGGTGGTTTAAAACAGGACCTCCCTTCATCAACCCAGTTTCACCAAATTAATGTTCCCCATACTGGGTTGACCTTTAACGATGAAAAGATCGGCTCCGGTATGAGTTTCTCAAGCGCCGGCCTGCTGGAGGATCTCTTGGATGAAGCTCAGGTATTGGCTTGTGATGCCAATTCCAATAACCCTAAACTAACTTCTCCTTCTTCTTCTTTGGTTTCCCCCGAAGAACAGCGGCTCTTTGATGGCTTCCATAAGTTGGCCCAAGACTCCAACACTTGCTTGTTTTTGAGCACAAAAACAAAGGAAGAAGGAGACGAACATGGGAGTTGTGGAAGTGAAGATTGGTCAAAACTACTAAATGCAGCAATGCCATCAAACATGCAACTTCCACAATGGTACACAAACAATAACAACAAAGAAGAACATCAACAAATTTCATCATATGGATCATCAGGACAAACGAATTCATCATCAATTTTACCAATTGAACATCATCATCATAACGACAACATTGTTGTTGGTGGTCTTGATGTTCAACATATTGCTGCTCTTTTCCCTGTCTCCACTACTGAACCACAAGACCAATCTACAAGAACCAACAACAATAATGCCTCTTGCCCTTGGGACAACTTGCCTGGAATTTGCTAA

Protein sequence

MSAQSQPTTPTSPLPTTMPTTPTSTPTTPTGGGASSIFQFHSPTTMHSHSPLSSPHQHEPHTFTSFPLGPPNSFTFHRPPPILAAPVRFKHFRTNNNNHHTGVNFSHHHPTLMVHSPPPQQLSRVDSFQFPAMTLATTSSSSPHILHNAHSGMVISNCVGGLKQDLPSSTQFHQINVPHTGLTFNDEKIGSGMSFSSAGLLEDLLDEAQVLACDANSNNPKLTSPSSSLVSPEEQRLFDGFHKLAQDSNTCLFLSTKTKEEGDEHGSCGSEDWSKLLNAAMPSNMQLPQWYTNNNNKEEHQQISSYGSSGQTNSSSILPIEHHHHNDNIVVGGLDVQHIAALFPVSTTEPQDQSTRTNNNNASCPWDNLPGIC*
BLAST of MELO3C025362 vs. TrEMBL
Match: A0A0A0L7M0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G076520 PE=4 SV=1)

HSP 1 Score: 733.4 bits (1892), Expect = 1.4e-208
Identity = 356/377 (94.43%), Postives = 361/377 (95.76%), Query Frame = 1

Query: 1   MSAQSQPTTPTSPLPTTMPTTPTSTPTTPTGGGASSIFQFHSPTTMHSHSPLSSPHQHEP 60
           MSAQSQPTTPTSPLPTTMP TPTSTPTTPTGG ASSIFQFHSPTTMHSHSPLSSPHQHEP
Sbjct: 145 MSAQSQPTTPTSPLPTTMPMTPTSTPTTPTGGAASSIFQFHSPTTMHSHSPLSSPHQHEP 204

Query: 61  HTFTSFPLGPPNSFTFHRPPPILAAPVRFKHFRTNNNNHHTGVNFSHHHPTLMVHSPPPQ 120
           HTFTSFPL PPNSFTFHRPPPILAAPVRFKHFRTNNN HH+ VNFSHHHPTLMVHSPPPQ
Sbjct: 205 HTFTSFPLNPPNSFTFHRPPPILAAPVRFKHFRTNNN-HHSAVNFSHHHPTLMVHSPPPQ 264

Query: 121 QLSRVDSFQFPAMTLATTSSSSPHILHNAHSGMVISNCVGGLKQDLPSSTQFHQINVPHT 180
           QLSRVDSFQFPAMTLATTSSSSPHILHNAHSGMVISNCVGGLKQDLPSSTQFHQ+NVPHT
Sbjct: 265 QLSRVDSFQFPAMTLATTSSSSPHILHNAHSGMVISNCVGGLKQDLPSSTQFHQMNVPHT 324

Query: 181 GLTFNDEKIGSGMSFSSAGLLEDLLDEAQVLACDANSNNPKLTSPSSSLVSPEEQRLFDG 240
           GLTFNDEKIG+GMSFSSAGLLEDLLDEAQVLACDANSNNPKL SPSSSLVSPEEQRLFDG
Sbjct: 325 GLTFNDEKIGNGMSFSSAGLLEDLLDEAQVLACDANSNNPKL-SPSSSLVSPEEQRLFDG 384

Query: 241 FHKLAQDSNTCLFLSTKTKEEGDEHGSCGSEDWSKLLNAAMPSNMQLPQWYTNNN-NKEE 300
           F K AQDSNTCLFL+TK KEEG+EHGSCGSEDWSKLLNAAMPSNM LPQWYTNNN NKEE
Sbjct: 385 FQKFAQDSNTCLFLNTKAKEEGEEHGSCGSEDWSKLLNAAMPSNMHLPQWYTNNNVNKEE 444

Query: 301 HQQISSYGSSGQTNSSSILPIE---HHHHNDNIVVGGLDVQHIAALFPVSTTEPQDQSTR 360
           HQQISSYGSSGQTNS SILPIE   HHHHNDNIVVGGLDVQHIAALFPVSTTEPQDQSTR
Sbjct: 445 HQQISSYGSSGQTNSPSILPIEHHHHHHHNDNIVVGGLDVQHIAALFPVSTTEPQDQSTR 504

Query: 361 TNNNNASCPWDNLPGIC 374
           TNNNN SCPWDNLPGIC
Sbjct: 505 TNNNNTSCPWDNLPGIC 519

BLAST of MELO3C025362 vs. NCBI nr
Match: gi|700200983|gb|KGN56116.1| (hypothetical protein Csa_3G076520 [Cucumis sativus])

HSP 1 Score: 733.4 bits (1892), Expect = 2.0e-208
Identity = 356/377 (94.43%), Postives = 361/377 (95.76%), Query Frame = 1

Query: 1   MSAQSQPTTPTSPLPTTMPTTPTSTPTTPTGGGASSIFQFHSPTTMHSHSPLSSPHQHEP 60
           MSAQSQPTTPTSPLPTTMP TPTSTPTTPTGG ASSIFQFHSPTTMHSHSPLSSPHQHEP
Sbjct: 145 MSAQSQPTTPTSPLPTTMPMTPTSTPTTPTGGAASSIFQFHSPTTMHSHSPLSSPHQHEP 204

Query: 61  HTFTSFPLGPPNSFTFHRPPPILAAPVRFKHFRTNNNNHHTGVNFSHHHPTLMVHSPPPQ 120
           HTFTSFPL PPNSFTFHRPPPILAAPVRFKHFRTNNN HH+ VNFSHHHPTLMVHSPPPQ
Sbjct: 205 HTFTSFPLNPPNSFTFHRPPPILAAPVRFKHFRTNNN-HHSAVNFSHHHPTLMVHSPPPQ 264

Query: 121 QLSRVDSFQFPAMTLATTSSSSPHILHNAHSGMVISNCVGGLKQDLPSSTQFHQINVPHT 180
           QLSRVDSFQFPAMTLATTSSSSPHILHNAHSGMVISNCVGGLKQDLPSSTQFHQ+NVPHT
Sbjct: 265 QLSRVDSFQFPAMTLATTSSSSPHILHNAHSGMVISNCVGGLKQDLPSSTQFHQMNVPHT 324

Query: 181 GLTFNDEKIGSGMSFSSAGLLEDLLDEAQVLACDANSNNPKLTSPSSSLVSPEEQRLFDG 240
           GLTFNDEKIG+GMSFSSAGLLEDLLDEAQVLACDANSNNPKL SPSSSLVSPEEQRLFDG
Sbjct: 325 GLTFNDEKIGNGMSFSSAGLLEDLLDEAQVLACDANSNNPKL-SPSSSLVSPEEQRLFDG 384

Query: 241 FHKLAQDSNTCLFLSTKTKEEGDEHGSCGSEDWSKLLNAAMPSNMQLPQWYTNNN-NKEE 300
           F K AQDSNTCLFL+TK KEEG+EHGSCGSEDWSKLLNAAMPSNM LPQWYTNNN NKEE
Sbjct: 385 FQKFAQDSNTCLFLNTKAKEEGEEHGSCGSEDWSKLLNAAMPSNMHLPQWYTNNNVNKEE 444

Query: 301 HQQISSYGSSGQTNSSSILPIE---HHHHNDNIVVGGLDVQHIAALFPVSTTEPQDQSTR 360
           HQQISSYGSSGQTNS SILPIE   HHHHNDNIVVGGLDVQHIAALFPVSTTEPQDQSTR
Sbjct: 445 HQQISSYGSSGQTNSPSILPIEHHHHHHHNDNIVVGGLDVQHIAALFPVSTTEPQDQSTR 504

Query: 361 TNNNNASCPWDNLPGIC 374
           TNNNN SCPWDNLPGIC
Sbjct: 505 TNNNNTSCPWDNLPGIC 519

BLAST of MELO3C025362 vs. NCBI nr
Match: gi|449463282|ref|XP_004149363.1| (PREDICTED: transcription factor MYB104 [Cucumis sativus])

HSP 1 Score: 733.4 bits (1892), Expect = 2.0e-208
Identity = 356/377 (94.43%), Postives = 361/377 (95.76%), Query Frame = 1

Query: 1   MSAQSQPTTPTSPLPTTMPTTPTSTPTTPTGGGASSIFQFHSPTTMHSHSPLSSPHQHEP 60
           MSAQSQPTTPTSPLPTTMP TPTSTPTTPTGG ASSIFQFHSPTTMHSHSPLSSPHQHEP
Sbjct: 136 MSAQSQPTTPTSPLPTTMPMTPTSTPTTPTGGAASSIFQFHSPTTMHSHSPLSSPHQHEP 195

Query: 61  HTFTSFPLGPPNSFTFHRPPPILAAPVRFKHFRTNNNNHHTGVNFSHHHPTLMVHSPPPQ 120
           HTFTSFPL PPNSFTFHRPPPILAAPVRFKHFRTNNN HH+ VNFSHHHPTLMVHSPPPQ
Sbjct: 196 HTFTSFPLNPPNSFTFHRPPPILAAPVRFKHFRTNNN-HHSAVNFSHHHPTLMVHSPPPQ 255

Query: 121 QLSRVDSFQFPAMTLATTSSSSPHILHNAHSGMVISNCVGGLKQDLPSSTQFHQINVPHT 180
           QLSRVDSFQFPAMTLATTSSSSPHILHNAHSGMVISNCVGGLKQDLPSSTQFHQ+NVPHT
Sbjct: 256 QLSRVDSFQFPAMTLATTSSSSPHILHNAHSGMVISNCVGGLKQDLPSSTQFHQMNVPHT 315

Query: 181 GLTFNDEKIGSGMSFSSAGLLEDLLDEAQVLACDANSNNPKLTSPSSSLVSPEEQRLFDG 240
           GLTFNDEKIG+GMSFSSAGLLEDLLDEAQVLACDANSNNPKL SPSSSLVSPEEQRLFDG
Sbjct: 316 GLTFNDEKIGNGMSFSSAGLLEDLLDEAQVLACDANSNNPKL-SPSSSLVSPEEQRLFDG 375

Query: 241 FHKLAQDSNTCLFLSTKTKEEGDEHGSCGSEDWSKLLNAAMPSNMQLPQWYTNNN-NKEE 300
           F K AQDSNTCLFL+TK KEEG+EHGSCGSEDWSKLLNAAMPSNM LPQWYTNNN NKEE
Sbjct: 376 FQKFAQDSNTCLFLNTKAKEEGEEHGSCGSEDWSKLLNAAMPSNMHLPQWYTNNNVNKEE 435

Query: 301 HQQISSYGSSGQTNSSSILPIE---HHHHNDNIVVGGLDVQHIAALFPVSTTEPQDQSTR 360
           HQQISSYGSSGQTNS SILPIE   HHHHNDNIVVGGLDVQHIAALFPVSTTEPQDQSTR
Sbjct: 436 HQQISSYGSSGQTNSPSILPIEHHHHHHHNDNIVVGGLDVQHIAALFPVSTTEPQDQSTR 495

Query: 361 TNNNNASCPWDNLPGIC 374
           TNNNN SCPWDNLPGIC
Sbjct: 496 TNNNNTSCPWDNLPGIC 510

BLAST of MELO3C025362 vs. NCBI nr
Match: gi|659126972|ref|XP_008463454.1| (PREDICTED: myb-related protein 330 [Cucumis melo])

HSP 1 Score: 334.3 bits (856), Expect = 2.7e-88
Identity = 155/156 (99.36%), Postives = 156/156 (100.00%), Query Frame = 1

Query: 1   MSAQSQPTTPTSPLPTTMPTTPTSTPTTPTGGGASSIFQFHSPTTMHSHSPLSSPHQHEP 60
           MSAQSQPTTPTSPLPTTMPTTPTSTPTTPTGGGASSIFQFHSPTTMHSHSPLSSPHQHEP
Sbjct: 147 MSAQSQPTTPTSPLPTTMPTTPTSTPTTPTGGGASSIFQFHSPTTMHSHSPLSSPHQHEP 206

Query: 61  HTFTSFPLGPPNSFTFHRPPPILAAPVRFKHFRTNNNNHHTGVNFSHHHPTLMVHSPPPQ 120
           HTFTSFPLGPPNSFTFHRPPPILAAPVRFKHFRTNNNNHHTGVNFSHHHPTLMVHSPPPQ
Sbjct: 207 HTFTSFPLGPPNSFTFHRPPPILAAPVRFKHFRTNNNNHHTGVNFSHHHPTLMVHSPPPQ 266

Query: 121 QLSRVDSFQFPAMTLATTSSSSPHILHNAHSGMVIS 157
           QLSRVDSFQFPAMTLATTSSSSPHILHNAHSGMVI+
Sbjct: 267 QLSRVDSFQFPAMTLATTSSSSPHILHNAHSGMVIN 302

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L7M0_CUCSA1.4e-20894.43Uncharacterized protein OS=Cucumis sativus GN=Csa_3G076520 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700200983|gb|KGN56116.1|2.0e-20894.43hypothetical protein Csa_3G076520 [Cucumis sativus][more]
gi|449463282|ref|XP_004149363.1|2.0e-20894.43PREDICTED: transcription factor MYB104 [Cucumis sativus][more]
gi|659126972|ref|XP_008463454.1|2.7e-8899.36PREDICTED: myb-related protein 330 [Cucumis melo][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009555 pollen development
biological_process GO:0009789 positive regulation of abscisic acid-activated signaling pathway
biological_process GO:0043068 positive regulation of programmed cell death
biological_process GO:0045893 positive regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
cellular_component GO:0090406 pollen tube
cellular_component GO:0000785 chromatin
molecular_function GO:0003677 DNA binding
molecular_function GO:0003682 chromatin binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C025362T1MELO3C025362T1mRNA