MELO3C025344 (gene) Melon (DHL92) v3.5.1

NameMELO3C025344
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionCytochrome b-245 heavy chain
Locationchr2 : 19005056 .. 19005220 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGAGGATGATCTTATCGACGATGATCCTATCGACTTCAAATGTGTTAAAGATGAAGATGATTATTCTATCGACTTCAACTGCACTGAGGATGAAGATGATGATCCTATCAACTGCGACTGCATTGAGGATGAAGATGATGATCCTACTGGCTTGCATTGA

mRNA sequence

ATGAAAGAGGATGATCTTATCGACGATGATCCTATCGACTTCAAATGTGTTAAAGATGAAGATGATTATTCTATCGACTTCAACTGCACTGAGGATGAAGATGATGATCCTATCAACTGCGACTGCATTGAGGATGAAGATGATGATCCTACTGGCTTGCATTGA

Coding sequence (CDS)

ATGAAAGAGGATGATCTTATCGACGATGATCCTATCGACTTCAAATGTGTTAAAGATGAAGATGATTATTCTATCGACTTCAACTGCACTGAGGATGAAGATGATGATCCTATCAACTGCGACTGCATTGAGGATGAAGATGATGATCCTACTGGCTTGCATTGA

Protein sequence

MKEDDLIDDDPIDFKCVKDEDDYSIDFNCTEDEDDDPINCDCIEDEDDDPTGLH*
BLAST of MELO3C025344 vs. NCBI nr
Match: gi|659127358|ref|XP_008463661.1| (PREDICTED: prostatic spermine-binding protein-like [Cucumis melo])

HSP 1 Score: 65.9 bits (159), Expect = 2.6e-08
Identity = 29/41 (70.73%), Postives = 34/41 (82.93%), Query Frame = 1

Query: 9  DDPIDFKCVKDEDDYSIDFNCTEDEDDDPINCDCIEDEDDD 50
          DDPI+F  +KDEDD SI+FN  EDEDDDPI CD I+D+DDD
Sbjct: 31 DDPINFNRIKDEDDDSINFNRIEDEDDDPIGCDRIKDKDDD 71

BLAST of MELO3C025344 vs. NCBI nr
Match: gi|659127358|ref|XP_008463661.1| (PREDICTED: prostatic spermine-binding protein-like [Cucumis melo])

HSP 1 Score: 49.7 bits (117), Expect = 1.9e-03
Identity = 26/50 (52.00%), Postives = 33/50 (66.00%), Query Frame = 1

Query: 3   EDDLIDDDPIDFKCVKDED-DYSIDFNCTEDED-DDPINCDCIEDEDDDP 51
           ED+  D DP     ++DED D  +D    EDED DDP++C+ IEDEDDDP
Sbjct: 137 EDENEDHDPFGCGNIEDEDKDDPLDCGYIEDEDEDDPLDCNSIEDEDDDP 186


HSP 2 Score: 44.3 bits (103), Expect = 8.1e-02
Identity = 18/52 (34.62%), Postives = 34/52 (65.38%), Query Frame = 1

Query: 1   MKEDDLIDDDPIDFKCVKDEDDYSIDFNC---TEDEDDDPINCDCIEDEDDD 50
           ++ +D  +DDP+ +  ++DE++    F C    +++ DDP++C  IEDED+D
Sbjct: 120 LRIEDEDEDDPLGYDIIEDENEDHDPFGCGNIEDEDKDDPLDCGYIEDEDED 171


HSP 3 Score: 43.9 bits (102), Expect = 1.1e-01
Identity = 21/36 (58.33%), Postives = 25/36 (69.44%), Query Frame = 1

Query: 17 VKDEDDYSIDFNCTEDEDDDPINCDCIEDEDDDPTG 53
          V  + D  I+FN  +DEDDD IN + IEDEDDDP G
Sbjct: 26 VAHKKDDPINFNRIKDEDDDSINFNRIEDEDDDPIG 61


HSP 4 Score: 43.1 bits (100), Expect = 1.8e-01
Identity = 23/49 (46.94%), Postives = 33/49 (67.35%), Query Frame = 1

Query: 8   DDDPIDFKCVKD-EDDYSIDFNCTED--EDDDPINCDCIEDED-DDPTG 53
           DDDPI    +KD +DD+  D +C ++  ++DDP++C  IE ED DDP G
Sbjct: 56  DDDPIGCDRIKDKDDDHLCDDDCLDEDKDEDDPLSCSDIEYEDEDDPFG 104


HSP 5 Score: 42.7 bits (99), Expect = 2.4e-01
Identity = 19/42 (45.24%), Postives = 29/42 (69.05%), Query Frame = 1

Query: 4   DDLIDDDPIDFKCVKDED-DYSIDFNCTEDEDDDPINCDCIE 45
           +D   DDP+D   ++DED D  +D N  EDEDDDP++C+ ++
Sbjct: 152 EDEDKDDPLDCGYIEDEDEDDPLDCNSIEDEDDDPLSCNTLK 193


HSP 6 Score: 40.4 bits (93), Expect = 1.2e+00
Identity = 23/46 (50.00%), Postives = 29/46 (63.04%), Query Frame = 1

Query: 9   DDPIDFKCVKDED-DYSIDFNCTED--EDDDPINCDCIEDED-DDP 51
           DD +DF  ++DED D  + ++  ED  ED DP  C  IEDED DDP
Sbjct: 114 DDTLDFLRIEDEDEDDPLGYDIIEDENEDHDPFGCGNIEDEDKDDP 159


HSP 7 Score: 36.2 bits (82), Expect = 2.2e+01
Identity = 19/44 (43.18%), Postives = 29/44 (65.91%), Query Frame = 1

Query: 8   DDDPIDFKCVKDED-DYSIDFNCTED-EDDDPINCDCIEDEDDD 50
           +DDP     ++DE  D ++DF   ED ++DDP+  D IEDE++D
Sbjct: 99  EDDPFGCGNIEDEGKDDTLDFLRIEDEDEDDPLGYDIIEDENED 142


HSP 8 Score: 63.5 bits (153), Expect = 1.3e-07
Identity = 34/49 (69.39%), Postives = 39/49 (79.59%), Query Frame = 1

Query: 1  MKEDDLIDDDPIDFKCVKDEDDYSIDFNCTEDEDDDPINCDCIEDEDDD 50
          M++DDLIDDDPIDF  +KDEDD SIDF   EDEDDD I+   IE+EDDD
Sbjct: 1  MEKDDLIDDDPIDFNRIKDEDDDSIDF-YIEDEDDDSIDF-YIENEDDD 47

BLAST of MELO3C025344 vs. NCBI nr
Match: gi|659114284|ref|XP_008456992.1| (PREDICTED: prostatic spermine-binding protein-like [Cucumis melo])

HSP 1 Score: 57.0 bits (136), Expect = 1.2e-05
Identity = 36/76 (47.37%), Postives = 42/76 (55.26%), Query Frame = 1

Query: 1  MKEDDLI-------------DDDPIDFKCVKDEDDYSIDFNC-----------TEDEDDD 53
          M++DDLI             DDD IDF  ++DEDD SIDF              EDEDDD
Sbjct: 1  MEKDDLIDDDPIDFNRIKDEDDDSIDF-YIEDEDDDSIDFYIENEDDDFIDFYIEDEDDD 60


HSP 2 Score: 55.1 bits (131), Expect = 4.6e-05
Identity = 34/88 (38.64%), Postives = 40/88 (45.45%), Query Frame = 1

Query: 1  MKEDDLIDDDPIDFK------------------------------------CVKDEDDYS 53
          M++DDLIDDDPIDF                                      ++DEDD S
Sbjct: 1  MEKDDLIDDDPIDFNRIKDEDDDSIDFYIEDEDDDSIDFYIENEDDDFIDFYIEDEDDDS 60


HSP 3 Score: 45.8 bits (107), Expect = 2.8e-02
Identity = 18/32 (56.25%), Postives = 24/32 (75.00%), Query Frame = 1

Query: 18  KDEDDYSIDFNCTEDEDDDPINCDCIEDEDDD 50
           +D DD  + ++  EDED+DP +C CIEDEDDD
Sbjct: 104 EDGDDDPLGYDNIEDEDEDPFSCGCIEDEDDD 135


HSP 4 Score: 43.1 bits (100), Expect = 1.8e-01
Identity = 16/32 (50.00%), Postives = 24/32 (75.00%), Query Frame = 1

Query: 8   DDDPIDFKCVKDEDDYSIDFNCTEDEDDDPIN 40
           D+DP    C++DEDD S+ ++  EDEDDDP++
Sbjct: 120 DEDPFSCGCIEDEDDDSLSYSHIEDEDDDPLD 151


HSP 5 Score: 41.6 bits (96), Expect = 5.2e-01
Identity = 24/56 (42.86%), Postives = 29/56 (51.79%), Query Frame = 1

Query: 8   DDDPIDFKCVKDEDDYSIDFNCT-------------EDEDDDPINCDCIEDEDDDP 51
           DDDPI +   +DEDD  +   C              ED DDDP+  D IEDED+DP
Sbjct: 70  DDDPIGWDRFEDEDDDRL--GCVALKMKMMIVSVIFEDGDDDPLGYDNIEDEDEDP 123


HSP 6 Score: 62.4 bits (150), Expect = 2.9e-07
Identity = 30/56 (53.57%), Postives = 37/56 (66.07%), Query Frame = 1

Query: 1  MKEDDLIDDDPIDFKCVKDEDDYSIDFNCTED-------EDDDPINCDCIEDEDDD 50
          M+ D LI+DDPID  C+KDEDD SID+N  ED       ED+DP     I+DED+D
Sbjct: 7  MENDTLINDDPIDLNCIKDEDDDSIDYNYIEDGDDHLDYEDEDPFGWGQIQDEDED 62

BLAST of MELO3C025344 vs. NCBI nr
Match: gi|659127362|ref|XP_008463663.1| (PREDICTED: acidic leucine-rich nuclear phosphoprotein 32 family member B-like [Cucumis melo])

HSP 1 Score: 53.1 bits (126), Expect = 1.7e-04
Identity = 24/48 (50.00%), Postives = 33/48 (68.75%), Query Frame = 1

Query: 4   DDLIDDDPIDFKCVKDEDDYS-IDFNCTEDEDDDPINCDCIEDEDDDP 51
           +D  +D P+D  C++DED+Y  + + C EDED+ P  C  IEDEDDDP
Sbjct: 85  EDKDEDYPLDCGCIEDEDEYDPLSYGCIEDEDEPPC-CGRIEDEDDDP 131


HSP 2 Score: 42.7 bits (99), Expect = 2.4e-01
Identity = 21/46 (45.65%), Postives = 32/46 (69.57%), Query Frame = 1

Query: 8   DDDPIDFKCVKDED-DYSIDFNCTEDEDDD-PINCDCIEDEDD-DP 51
           +DDP  +  ++DED D   + +  ED+D+D P++C CIEDED+ DP
Sbjct: 61  EDDPFSYDHIEDEDEDNPFENDFIEDKDEDYPLDCGCIEDEDEYDP 106


HSP 3 Score: 34.3 bits (77), Expect = 8.4e+01
Identity = 20/55 (36.36%), Postives = 32/55 (58.18%), Query Frame = 1

Query: 2  KEDDLID-------DDPIDFKCVKDEDDYSIDFNCTEDEDDDPINCDCIEDEDDD 50
          ++DD ID       DD +D++   DED +       ++++DDP + D IEDED+D
Sbjct: 26 EDDDSIDYNYIEDGDDHLDYE---DEDPFGWG-QIQDEDEDDPFSYDHIEDEDED 76

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
gi|659127358|ref|XP_008463661.1|2.6e-0870.73PREDICTED: prostatic spermine-binding protein-like [Cucumis melo][more]
gi|659127358|ref|XP_008463661.1|1.9e-0352.00PREDICTED: prostatic spermine-binding protein-like [Cucumis melo][more]
gi|659114284|ref|XP_008456992.1|1.2e-0547.37PREDICTED: prostatic spermine-binding protein-like [Cucumis melo][more]
gi|659127362|ref|XP_008463663.1|1.7e-0450.00PREDICTED: acidic leucine-rich nuclear phosphoprotein 32 family member B-like [C... [more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C025344T1MELO3C025344T1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C025344Wax gourdmewgoB273
MELO3C025344Wax gourdmewgoB290
MELO3C025344Melon (DHL92) v3.5.1memeB104
MELO3C025344Cucurbita moschata (Rifu)cmomeB098
MELO3C025344Cucumber (Gy14) v1cgymeB169
MELO3C025344Cucurbita maxima (Rimu)cmameB058
MELO3C025344Cucurbita maxima (Rimu)cmameB105
MELO3C025344Cucurbita maxima (Rimu)cmameB719
MELO3C025344Cucurbita moschata (Rifu)cmomeB049
MELO3C025344Cucurbita moschata (Rifu)cmomeB140
MELO3C025344Cucurbita moschata (Rifu)cmomeB710
MELO3C025344Wild cucumber (PI 183967)cpimeB050
MELO3C025344Wild cucumber (PI 183967)cpimeB110
MELO3C025344Cucumber (Chinese Long) v2cumeB002
MELO3C025344Cucumber (Chinese Long) v2cumeB003
MELO3C025344Cucumber (Chinese Long) v2cumeB090
MELO3C025344Watermelon (Charleston Gray)mewcgB232
MELO3C025344Watermelon (Charleston Gray)mewcgB255
MELO3C025344Watermelon (97103) v1mewmB284
MELO3C025344Watermelon (97103) v1mewmB290
MELO3C025344Cucurbita pepo (Zucchini)cpemeB082
MELO3C025344Cucurbita pepo (Zucchini)cpemeB334
MELO3C025344Cucurbita pepo (Zucchini)cpemeB621
MELO3C025344Cucurbita pepo (Zucchini)cpemeB751
MELO3C025344Bottle gourd (USVL1VR-Ls)lsimeB102
MELO3C025344Bottle gourd (USVL1VR-Ls)lsimeB403
MELO3C025344Cucumber (Gy14) v2cgybmeB045
MELO3C025344Cucumber (Gy14) v2cgybmeB095
MELO3C025344Silver-seed gourdcarmeB0035
MELO3C025344Silver-seed gourdcarmeB0131
MELO3C025344Silver-seed gourdcarmeB0572
MELO3C025344Cucumber (Chinese Long) v3cucmeB049
MELO3C025344Cucumber (Chinese Long) v3cucmeB116
MELO3C025344Watermelon (97103) v2mewmbB239
MELO3C025344Watermelon (97103) v2mewmbB262
MELO3C025344Watermelon (97103) v2mewmbB273