MELO3C025339 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C025339
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionGlutamate-ammonia-ligase adenylyltransferase
Locationchr2 : 18814904 .. 18815117 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCGGCTTGTGGCTCGGCTCAACTCGGCTCGCGGCTCGGCTTAGTTCGGCTCGCGGCTCGGCTCACTCGGCTCGCGGCTCGGCTCACTCGGCTCGCGGCTCAGCTCACTCGGCTCGGCTCACGCGGCTCACTCGGCTCGGCTCACTCGGCTCACTCGGATTCGTTTGTGGCTCACGGCTCGGACTGGAAGCGGGTCTCGGGTCGGATTGGATGA

mRNA sequence

CTCGGCTTGTGGCTCGGCTCAACTCGGCTCGCGGCTCGGCTTAGTTCGGCTCGCGGCTCGGCTCACTCGGCTCGCGGCTCGGCTCACTCGGCTCGCGGCTCAGCTCACTCGGCTCGGCTCACGCGGCTCACTCGGCTCGGCTCACTCGGCTCACTCGGATTCGTTTGTGGCTCACGGCTCGGACTGGAAGCGGGTCTCGGGTCGGATTGGATGA

Coding sequence (CDS)

CTCGGCTTGTGGCTCGGCTCAACTCGGCTCGCGGCTCGGCTTAGTTCGGCTCGCGGCTCGGCTCACTCGGCTCGCGGCTCGGCTCACTCGGCTCGCGGCTCAGCTCACTCGGCTCGGCTCACGCGGCTCACTCGGCTCGGCTCACTCGGCTCACTCGGATTCGTTTGTGGCTCACGGCTCGGACTGGAAGCGGGTCTCGGGTCGGATTGGATGA

Protein sequence

LGLWLGSTRLAARLSSARGSAHSARGSAHSARGSAHSARLTRLTRLGSLGSLGFVCGSRLGLEAGLGSDWM
Homology
[Close]
BLAST of MELO3C025339 vs. TrEMBL
Match: E5GBK6_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 4.9e-06
Identity = 35/50 (70.00%), Postives = 37/50 (74.00%), Query Frame = 1 

Query: 8   TRLAARLS------SARGSAHSARGSAHSARGSAHSARLTRLTRLGSLGS 52
           T +AAR S      SARGSAHSARGSA  +  SAHSARLTRLTRLGS GS
Sbjct: 54  TDIAARGSAHSARGSARGSAHSARGSARGSAHSAHSARLTRLTRLGSPGS 103

[Close]
BLAST of MELO3C025339 vs. TrEMBL
Match: E5GBK6_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 29.6 bits (65), Expect = 1.9e+03
Identity = 23/43 (53.49%), Postives = 27/43 (62.79%), Query Frame = 1 

Query: 6   GSTRLAARLS--SARGSAH---SARGSAHSARGSAHSARLTRL 44
           GS R +A  +  SARGSAH   SAR +  +  GS  SARLTRL
Sbjct: 67  GSARGSAHSARGSARGSAHSAHSARLTRLTRLGSPGSARLTRL 109

[Close]
BLAST of MELO3C025339 vs. NCBI nr
Match: gi|307135990|gb|ADN33848.1| (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 58.2 bits (139), Expect = 7.0e-06
Identity = 35/50 (70.00%), Postives = 37/50 (74.00%), Query Frame = 1 

Query: 8   TRLAARLS------SARGSAHSARGSAHSARGSAHSARLTRLTRLGSLGS 52
           T +AAR S      SARGSAHSARGSA  +  SAHSARLTRLTRLGS GS
Sbjct: 54  TDIAARGSAHSARGSARGSAHSARGSARGSAHSAHSARLTRLTRLGSPGS 103

[Close]
BLAST of MELO3C025339 vs. NCBI nr
Match: gi|307135990|gb|ADN33848.1| (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 29.6 bits (65), Expect = 2.7e+03
Identity = 23/43 (53.49%), Postives = 27/43 (62.79%), Query Frame = 1 

Query: 6   GSTRLAARLS--SARGSAH---SARGSAHSARGSAHSARLTRL 44
           GS R +A  +  SARGSAH   SAR +  +  GS  SARLTRL
Sbjct: 67  GSARGSAHSARGSARGSAHSAHSARLTRLTRLGSPGSARLTRL 109

The following BLAST results are available for this feature:
BLAST of MELO3C025339 vs. TrEMBL
Match NameE-valueIdentityDescription
E5GBK6_CUCME4.9e-0670.00Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
E5GBK6_CUCME1.9e+0353.49Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
BLAST of MELO3C025339 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|307135990|gb|ADN33848.1|7.0e-0670.00hypothetical protein [Cucumis melo subsp. melo][more]
gi|307135990|gb|ADN33848.1|2.7e+0353.49hypothetical protein [Cucumis melo subsp. melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C025339T1MELO3C025339T1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C025339Cucurbita moschata (Rifu)cmomeB049
MELO3C025339Cucurbita moschata (Rifu)cmomeB140
MELO3C025339Cucurbita moschata (Rifu)cmomeB710
MELO3C025339Wild cucumber (PI 183967)cpimeB050
MELO3C025339Wild cucumber (PI 183967)cpimeB110
MELO3C025339Cucumber (Chinese Long) v2cumeB002
MELO3C025339Cucumber (Chinese Long) v2cumeB003
MELO3C025339Cucumber (Chinese Long) v2cumeB090
MELO3C025339Watermelon (Charleston Gray)mewcgB232
MELO3C025339Watermelon (Charleston Gray)mewcgB255
MELO3C025339Watermelon (97103) v1mewmB284
MELO3C025339Watermelon (97103) v1mewmB290
MELO3C025339Cucurbita pepo (Zucchini)cpemeB082
MELO3C025339Cucurbita pepo (Zucchini)cpemeB334
MELO3C025339Cucurbita pepo (Zucchini)cpemeB621
MELO3C025339Cucurbita pepo (Zucchini)cpemeB751
MELO3C025339Bottle gourd (USVL1VR-Ls)lsimeB102
MELO3C025339Bottle gourd (USVL1VR-Ls)lsimeB403
MELO3C025339Cucumber (Gy14) v2cgybmeB045
MELO3C025339Cucumber (Gy14) v2cgybmeB095
MELO3C025339Silver-seed gourdcarmeB0035
MELO3C025339Silver-seed gourdcarmeB0131
MELO3C025339Silver-seed gourdcarmeB0572
MELO3C025339Cucumber (Chinese Long) v3cucmeB049
MELO3C025339Cucumber (Chinese Long) v3cucmeB116
MELO3C025339Watermelon (97103) v2mewmbB239
MELO3C025339Watermelon (97103) v2mewmbB262
MELO3C025339Watermelon (97103) v2mewmbB273
MELO3C025339Wax gourdmewgoB273
MELO3C025339Wax gourdmewgoB290
MELO3C025339Melon (DHL92) v3.5.1memeB104
MELO3C025339Cucurbita moschata (Rifu)cmomeB098
MELO3C025339Cucumber (Gy14) v1cgymeB169
MELO3C025339Cucurbita maxima (Rimu)cmameB058
MELO3C025339Cucurbita maxima (Rimu)cmameB105
MELO3C025339Cucurbita maxima (Rimu)cmameB719