MELO3C025301 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C025301
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionAuxin response factor
Locationchr2 : 18172168 .. 18172605 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAATGTTTATGAAAATGTTGGAAAGCTTCAAATCCAAGTATGGTTTTCAGCACAGATCAAGCTGAAAAGCAGTCACTCTGAAGTCTTTGGCCGTCCACAAGATGAGAAGAAGGTTAGTTATGCAGACAAATTTAAGCAGAATAAGATCTCACCTGTTTTGGACATGGAAAAACAGAGCAATCACCAACCATGGGTTATCAAGAATCCAAAGGTCTTCCAAACAGATTTCAACAATCATTGGGTTGTCACACATCTTTTTGAGTTCAATAGCTGGGTCGAGATTAAAGAAAGTCCACAAACTGCATTCCACATGGAGGTCACCATCAATCTGTTGTTTGCAAATAATGCTCTAATTGATATGGATCAACGATCTTTGGATGAAGTGGTAGAGCAACCTGGGAAATGGCAGAATATTGGTGCCTTCCACTTTTAA

mRNA sequence

ATGGCGAATGTTTATGAAAATGTTGGAAAGCTTCAAATCCAAGTATGGTTTTCAGCACAGATCAAGCTGAAAAGCAGTCACTCTGAAGTCTTTGGCCGTCCACAAGATGAGAAGAAGGTTAGTTATGCAGACAAATTTAAGCAGAATAAGATCTCACCTGTTTTGGACATGGAAAAACAGAGCAATCACCAACCATGGGTTATCAAGAATCCAAAGGTCTTCCAAACAGATTTCAACAATCATTGGGTTGTCACACATCTTTTTGAGTTCAATAGCTGGGTCGAGATTAAAGAAAGTCCACAAACTGCATTCCACATGGAGGTCACCATCAATCTGTTGTTTGCAAATAATGCTCTAATTGATATGGATCAACGATCTTTGGATGAAGTGGTAGAGCAACCTGGGAAATGGCAGAATATTGGTGCCTTCCACTTTTAA

Coding sequence (CDS)

ATGGCGAATGTTTATGAAAATGTTGGAAAGCTTCAAATCCAAGTATGGTTTTCAGCACAGATCAAGCTGAAAAGCAGTCACTCTGAAGTCTTTGGCCGTCCACAAGATGAGAAGAAGGTTAGTTATGCAGACAAATTTAAGCAGAATAAGATCTCACCTGTTTTGGACATGGAAAAACAGAGCAATCACCAACCATGGGTTATCAAGAATCCAAAGGTCTTCCAAACAGATTTCAACAATCATTGGGTTGTCACACATCTTTTTGAGTTCAATAGCTGGGTCGAGATTAAAGAAAGTCCACAAACTGCATTCCACATGGAGGTCACCATCAATCTGTTGTTTGCAAATAATGCTCTAATTGATATGGATCAACGATCTTTGGATGAAGTGGTAGAGCAACCTGGGAAATGGCAGAATATTGGTGCCTTCCACTTTTAA

Protein sequence

MANVYENVGKLQIQVWFSAQIKLKSSHSEVFGRPQDEKKVSYADKFKQNKISPVLDMEKQSNHQPWVIKNPKVFQTDFNNHWVVTHLFEFNSWVEIKESPQTAFHMEVTINLLFANNALIDMDQRSLDEVVEQPGKWQNIGAFHF*
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0016787 hydrolase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU51035melon EST collection version 4.0transcribed_cluster
MU56152melon EST collection version 4.0transcribed_cluster
MU57069melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C025301T1MELO3C025301T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU51035MU51035transcribed_cluster
MU56152MU56152transcribed_cluster
MU57069MU57069transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C025301Cucurbita pepo (Zucchini)cpemeB621
MELO3C025301Cucurbita pepo (Zucchini)cpemeB751
MELO3C025301Bottle gourd (USVL1VR-Ls)lsimeB102
MELO3C025301Bottle gourd (USVL1VR-Ls)lsimeB403
MELO3C025301Cucumber (Gy14) v2cgybmeB053
MELO3C025301Cucumber (Gy14) v2cgybmeB095
MELO3C025301Silver-seed gourdcarmeB0035
MELO3C025301Silver-seed gourdcarmeB0131
MELO3C025301Silver-seed gourdcarmeB0572
MELO3C025301Cucumber (Chinese Long) v3cucmeB058
MELO3C025301Cucumber (Chinese Long) v3cucmeB116
MELO3C025301Watermelon (97103) v2mewmbB239
MELO3C025301Watermelon (97103) v2mewmbB265
MELO3C025301Watermelon (97103) v2mewmbB273
MELO3C025301Wax gourdmewgoB270
MELO3C025301Wax gourdmewgoB290
MELO3C025301Melon (DHL92) v3.5.1memeB104
MELO3C025301Cucurbita moschata (Rifu)cmomeB098
MELO3C025301Cucumber (Gy14) v1cgymeB089
MELO3C025301Cucumber (Gy14) v1cgymeB169
MELO3C025301Cucurbita maxima (Rimu)cmameB058
MELO3C025301Cucurbita maxima (Rimu)cmameB105
MELO3C025301Cucurbita maxima (Rimu)cmameB150
MELO3C025301Cucurbita maxima (Rimu)cmameB719
MELO3C025301Cucurbita moschata (Rifu)cmomeB049
MELO3C025301Cucurbita moschata (Rifu)cmomeB140
MELO3C025301Cucurbita moschata (Rifu)cmomeB710
MELO3C025301Wild cucumber (PI 183967)cpimeB059
MELO3C025301Wild cucumber (PI 183967)cpimeB110
MELO3C025301Cucumber (Chinese Long) v2cumeB003
MELO3C025301Cucumber (Chinese Long) v2cumeB090
MELO3C025301Watermelon (Charleston Gray)mewcgB232
MELO3C025301Watermelon (Charleston Gray)mewcgB258
MELO3C025301Watermelon (97103) v1mewmB284
MELO3C025301Watermelon (97103) v1mewmB293
MELO3C025301Cucurbita pepo (Zucchini)cpemeB082
MELO3C025301Cucurbita pepo (Zucchini)cpemeB334