MELO3C025171.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C025171.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionT4.5 protein
Locationchr10 : 9596525 .. 9596788 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTAACGCCTCCTCTTCTGGCTTCTCCAATCCACTGTTGAATCAAGTCCTCAACCAACTAACCATGATCAAGTTGGATCAAATCAATTATCTCTTGTGGAAGATTCTTGTTCTTCTAATACTCAAATGCTACAAACTTGAAGGCCATCTTACAGGTGAGAAATTGTGTCCTCCAAAATATGTTCTGACGCCGGGAAGCACAAGTGCGTTAGTGAATGAAGCTAAAGAAATTGAAGGAGCAGTGCAAGCTAGCGACACATAG

mRNA sequence

ATGGTTAACGCCTCCTCTTCTGGCTTCTCCAATCCACTGTTGAATCAAGTCCTCAACCAACTAACCATGATCAAGTTGGATCAAATCAATTATCTCTTGTGGAAGATTCTTGTTCTTCTAATACTCAAATGCTACAAACTTGAAGGCCATCTTACAGGTGAGAAATTGTGTCCTCCAAAATATGTTCTGACGCCGGGAAGCACAAGTGCGTTAGTGAATGAAGCTAAAGAAATTGAAGGAGCAGTGCAAGCTAGCGACACATAG

Coding sequence (CDS)

ATGGTTAACGCCTCCTCTTCTGGCTTCTCCAATCCACTGTTGAATCAAGTCCTCAACCAACTAACCATGATCAAGTTGGATCAAATCAATTATCTCTTGTGGAAGATTCTTGTTCTTCTAATACTCAAATGCTACAAACTTGAAGGCCATCTTACAGGTGAGAAATTGTGTCCTCCAAAATATGTTCTGACGCCGGGAAGCACAAGTGCGTTAGTGAATGAAGCTAAAGAAATTGAAGGAGCAGTGCAAGCTAGCGACACATAG

Protein sequence

MVNASSSGFSNPLLNQVLNQLTMIKLDQINYLLWKILVLLILKCYKLEGHLTGEKLCPPKYVLTPGSTSALVNEAKEIEGAVQASDT
Homology
[Close]
BLAST of MELO3C025171.2 vs. NCBI nr
Match: XP_016902197.1 (PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo])

HSP 1 Score: 87.8 bits (216), Expect = 2.0e-14
Identity = 45/70 (64.29%), Postives = 53/70 (75.71%), Query Frame = 0 

Query: 5  SSSGFSNPLLNQVLNQLTMIKLDQINYLLWKILVLLILKCYKLEGHLTGEKLCPPKYVLT 64
          SS+GFSNP LNQ+LNQLT +KLD+ NYLLWK L L ILK YKLEGHLT E  CP  +VL+
Sbjct: 14 SSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLS 73

Query: 65 PGSTSALVNE 75
            S++  V E
Sbjct: 74 ASSSNTTVTE 83

[Close]
BLAST of MELO3C025171.2 vs. NCBI nr
Match: XP_016902203.1 (PREDICTED: uncharacterized protein LOC107991581 isoform X3 [Cucumis melo])

HSP 1 Score: 87.8 bits (216), Expect = 2.0e-14
Identity = 45/70 (64.29%), Postives = 53/70 (75.71%), Query Frame = 0 

Query: 5  SSSGFSNPLLNQVLNQLTMIKLDQINYLLWKILVLLILKCYKLEGHLTGEKLCPPKYVLT 64
          SS+GFSNP LNQ+LNQLT +KLD+ NYLLWK L L ILK YKLEGHLT E  CP  +VL+
Sbjct: 14 SSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLS 73

Query: 65 PGSTSALVNE 75
            S++  V E
Sbjct: 74 ASSSNTTVTE 83

[Close]
BLAST of MELO3C025171.2 vs. NCBI nr
Match: XP_016902204.1 (PREDICTED: uncharacterized protein LOC107991581 isoform X4 [Cucumis melo])

HSP 1 Score: 87.8 bits (216), Expect = 2.0e-14
Identity = 45/70 (64.29%), Postives = 53/70 (75.71%), Query Frame = 0 

Query: 5  SSSGFSNPLLNQVLNQLTMIKLDQINYLLWKILVLLILKCYKLEGHLTGEKLCPPKYVLT 64
          SS+GFSNP LNQ+LNQLT +KLD+ NYLLWK L L ILK YKLEGHLT E  CP  +VL+
Sbjct: 14 SSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLS 73

Query: 65 PGSTSALVNE 75
            S++  V E
Sbjct: 74 ASSSNTTVTE 83

[Close]
BLAST of MELO3C025171.2 vs. NCBI nr
Match: XP_016902205.1 (PREDICTED: uncharacterized protein LOC107991581 isoform X5 [Cucumis melo])

HSP 1 Score: 87.8 bits (216), Expect = 2.0e-14
Identity = 45/70 (64.29%), Postives = 53/70 (75.71%), Query Frame = 0 

Query: 5  SSSGFSNPLLNQVLNQLTMIKLDQINYLLWKILVLLILKCYKLEGHLTGEKLCPPKYVLT 64
          SS+GFSNP LNQ+LNQLT +KLD+ NYLLWK L L ILK YKLEGHLT E  CP  +VL+
Sbjct: 14 SSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLS 73

Query: 65 PGSTSALVNE 75
            S++  V E
Sbjct: 74 ASSSNTTVTE 83

[Close]
BLAST of MELO3C025171.2 vs. NCBI nr
Match: XP_016901223.1 (PREDICTED: uncharacterized protein LOC107991202 [Cucumis melo])

HSP 1 Score: 87.4 bits (215), Expect = 2.6e-14
Identity = 44/86 (51.16%), Postives = 60/86 (69.77%), Query Frame = 0 

Query: 1  MVNASSSGFSNPLLNQVLNQLTMIKLDQINYLLWKILVLLILKCYKLEGHLTGEKLCPPK 60
          +V +S++ FSNP LNQ+LNQL+ +KLD+ NYLLWK L L I+K YK EG+LTGE  CPPK
Sbjct: 7  LVESSTTNFSNPPLNQLLNQLSSVKLDRENYLLWKTLALPIMKSYKFEGYLTGENPCPPK 66

Query: 61 YVLTPGSTSALVNEAKEIEGAVQASD 87
          ++     T+       EI+G  +A+D
Sbjct: 67 FI-----TNQTAESQSEIDGTAEATD 87

[Close]
BLAST of MELO3C025171.2 vs. TrEMBL
Match: tr|A0A1S4E1U9|A0A1S4E1U9_CUCME (uncharacterized protein LOC107991581 isoform X4 OS=Cucumis melo OX=3656 GN=LOC107991581 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.3e-14
Identity = 45/70 (64.29%), Postives = 53/70 (75.71%), Query Frame = 0 

Query: 5  SSSGFSNPLLNQVLNQLTMIKLDQINYLLWKILVLLILKCYKLEGHLTGEKLCPPKYVLT 64
          SS+GFSNP LNQ+LNQLT +KLD+ NYLLWK L L ILK YKLEGHLT E  CP  +VL+
Sbjct: 14 SSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLS 73

Query: 65 PGSTSALVNE 75
            S++  V E
Sbjct: 74 ASSSNTTVTE 83

[Close]
BLAST of MELO3C025171.2 vs. TrEMBL
Match: tr|A0A1S4E1V2|A0A1S4E1V2_CUCME (uncharacterized protein LOC107991581 isoform X3 OS=Cucumis melo OX=3656 GN=LOC107991581 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.3e-14
Identity = 45/70 (64.29%), Postives = 53/70 (75.71%), Query Frame = 0 

Query: 5  SSSGFSNPLLNQVLNQLTMIKLDQINYLLWKILVLLILKCYKLEGHLTGEKLCPPKYVLT 64
          SS+GFSNP LNQ+LNQLT +KLD+ NYLLWK L L ILK YKLEGHLT E  CP  +VL+
Sbjct: 14 SSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLS 73

Query: 65 PGSTSALVNE 75
            S++  V E
Sbjct: 74 ASSSNTTVTE 83

[Close]
BLAST of MELO3C025171.2 vs. TrEMBL
Match: tr|A0A1S4E1U6|A0A1S4E1U6_CUCME (uncharacterized protein LOC107991581 isoform X1 OS=Cucumis melo OX=3656 GN=LOC107991581 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.3e-14
Identity = 45/70 (64.29%), Postives = 53/70 (75.71%), Query Frame = 0 

Query: 5  SSSGFSNPLLNQVLNQLTMIKLDQINYLLWKILVLLILKCYKLEGHLTGEKLCPPKYVLT 64
          SS+GFSNP LNQ+LNQLT +KLD+ NYLLWK L L ILK YKLEGHLT E  CP  +VL+
Sbjct: 14 SSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLS 73

Query: 65 PGSTSALVNE 75
            S++  V E
Sbjct: 74 ASSSNTTVTE 83

[Close]
BLAST of MELO3C025171.2 vs. TrEMBL
Match: tr|A0A1S4E2K3|A0A1S4E2K3_CUCME (uncharacterized protein LOC107991581 isoform X5 OS=Cucumis melo OX=3656 GN=LOC107991581 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.3e-14
Identity = 45/70 (64.29%), Postives = 53/70 (75.71%), Query Frame = 0 

Query: 5  SSSGFSNPLLNQVLNQLTMIKLDQINYLLWKILVLLILKCYKLEGHLTGEKLCPPKYVLT 64
          SS+GFSNP LNQ+LNQLT +KLD+ NYLLWK L L ILK YKLEGHLT E  CP  +VL+
Sbjct: 14 SSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLS 73

Query: 65 PGSTSALVNE 75
            S++  V E
Sbjct: 74 ASSSNTTVTE 83

[Close]
BLAST of MELO3C025171.2 vs. TrEMBL
Match: tr|A0A1S4DZ26|A0A1S4DZ26_CUCME (uncharacterized protein LOC107991202 OS=Cucumis melo OX=3656 GN=LOC107991202 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.7e-14
Identity = 44/86 (51.16%), Postives = 60/86 (69.77%), Query Frame = 0 

Query: 1  MVNASSSGFSNPLLNQVLNQLTMIKLDQINYLLWKILVLLILKCYKLEGHLTGEKLCPPK 60
          +V +S++ FSNP LNQ+LNQL+ +KLD+ NYLLWK L L I+K YK EG+LTGE  CPPK
Sbjct: 7  LVESSTTNFSNPPLNQLLNQLSSVKLDRENYLLWKTLALPIMKSYKFEGYLTGENPCPPK 66

Query: 61 YVLTPGSTSALVNEAKEIEGAVQASD 87
          ++     T+       EI+G  +A+D
Sbjct: 67 FI-----TNQTAESQSEIDGTAEATD 87

The following BLAST results are available for this feature:
BLAST of MELO3C025171.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016902197.12.0e-1464.29PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo][more]
XP_016902203.12.0e-1464.29PREDICTED: uncharacterized protein LOC107991581 isoform X3 [Cucumis melo][more]
XP_016902204.12.0e-1464.29PREDICTED: uncharacterized protein LOC107991581 isoform X4 [Cucumis melo][more]
XP_016902205.12.0e-1464.29PREDICTED: uncharacterized protein LOC107991581 isoform X5 [Cucumis melo][more]
XP_016901223.12.6e-1451.16PREDICTED: uncharacterized protein LOC107991202 [Cucumis melo][more]
BLAST of MELO3C025171.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C025171.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C025171.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4E1U9|A0A1S4E1U9_CUCME1.3e-1464.29uncharacterized protein LOC107991581 isoform X4 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1S4E1V2|A0A1S4E1V2_CUCME1.3e-1464.29uncharacterized protein LOC107991581 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1S4E1U6|A0A1S4E1U6_CUCME1.3e-1464.29uncharacterized protein LOC107991581 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1S4E2K3|A0A1S4E2K3_CUCME1.3e-1464.29uncharacterized protein LOC107991581 isoform X5 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1S4DZ26|A0A1S4DZ26_CUCME1.7e-1451.16uncharacterized protein LOC107991202 OS=Cucumis melo OX=3656 GN=LOC107991202 PE=... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C025171.2.1MELO3C025171.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C025171.2Cucumber (Chinese Long) v2cumedB350
MELO3C025171.2Melon (DHL92) v3.6.1medmedB030
MELO3C025171.2Bottle gourd (USVL1VR-Ls)lsimedB246
MELO3C025171.2Bottle gourd (USVL1VR-Ls)lsimedB297
MELO3C025171.2Watermelon (Charleston Gray)medwcgB040
MELO3C025171.2Watermelon (Charleston Gray)medwcgB064
MELO3C025171.2Watermelon (97103) v1medwmB045
MELO3C025171.2Watermelon (97103) v1medwmB054
MELO3C025171.2Silver-seed gourdcarmedB0091
MELO3C025171.2Silver-seed gourdcarmedB0672
MELO3C025171.2Cucumber (Chinese Long) v3cucmedB165
MELO3C025171.2Cucumber (Chinese Long) v3cucmedB362
MELO3C025171.2Watermelon (97103) v2medwmbB040
MELO3C025171.2Watermelon (97103) v2medwmbB061
MELO3C025171.2Wax gourdmedwgoB051
MELO3C025171.2Wax gourdmedwgoB083
MELO3C025171.2Cucumber (Gy14) v2cgybmedB146
MELO3C025171.2Cucumber (Gy14) v2cgybmedB312
MELO3C025171.2Cucumber (Gy14) v1cgymedB304
MELO3C025171.2Cucumber (Gy14) v1cgymedB597
MELO3C025171.2Cucurbita maxima (Rimu)cmamedB238
MELO3C025171.2Cucurbita maxima (Rimu)cmamedB738
MELO3C025171.2Cucurbita maxima (Rimu)cmamedB741
MELO3C025171.2Cucurbita maxima (Rimu)cmamedB845
MELO3C025171.2Cucurbita moschata (Rifu)cmomedB733
MELO3C025171.2Cucurbita moschata (Rifu)cmomedB736
MELO3C025171.2Cucurbita moschata (Rifu)cmomedB839
MELO3C025171.2Cucurbita pepo (Zucchini)cpemedB436
MELO3C025171.2Cucurbita pepo (Zucchini)cpemedB440
MELO3C025171.2Cucurbita pepo (Zucchini)cpemedB931
MELO3C025171.2Wild cucumber (PI 183967)cpimedB163
MELO3C025171.2Wild cucumber (PI 183967)cpimedB352
MELO3C025171.2Cucumber (Chinese Long) v2cumedB163