MELO3C025169.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C025169.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionKNR4/SMI1 homolog 2-like
Locationchr10 : 9548015 .. 9548540 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGAGAGATCGGTGACCAAGCGAGAGAGTCTAGAAACTTCAAAAGAGAGGGGGAGGACTGAACCCCCAAAAGAAAACGTCAATGTACAGAAGAAACAAAGGATAAAAAGCTTGGTAAAGTGCATATTTATTTTCCAATGACTTGTGGTCTGTTAGGTTTCAACAATGCTTATTTATGTTATTGTCTGTTTAAGTTTCAAGAAAGCGAGTTTACAGAGGAAAAGTTGAAGGAAAGAAACAAAAAAGAGATTGAAGGAAACCCTTTGTTGTACTTAAATTATGTATTATATAAATTGATTATAACTTTGACAAACAGAAAGAAACTGAAAGCGAAAGCGAAAGCGAAAAGGAGGAACAAGTAGAAGAAGATAAACAAGTAGAAGAAGAAAATGATGAAGAAGGGGAAGCTGAGACAGCAGTAGATGAAGATTCGAGTTCATCGACGAGTCAACGAGATGAAAGACCAATGGATACTAAGAAGAGAAAAAAGGTTGGGGAAAAGGGAACGAAAGTAAGCACATAA

mRNA sequence

ATGGGAGAGAGATCGGTGACCAAGCGAGAGAGTCTAGAAACTTCAAAAGAGAGGGGGAGGACTGAACCCCCAAAAGAAAACGTCAATGTACAGAAGAAACAAAGGATAAAAAGCTTGAAAGAAACTGAAAGCGAAAGCGAAAGCGAAAAGGAGGAACAAGTAGAAGAAGATAAACAAGTAGAAGAAGAAAATGATGAAGAAGGGGAAGCTGAGACAGCAGTAGATGAAGATTCGAGTTCATCGACGAGTCAACGAGATGAAAGACCAATGGATACTAAGAAGAGAAAAAAGGTTGGGGAAAAGGGAACGAAAGTAAGCACATAA

Coding sequence (CDS)

ATGGGAGAGAGATCGGTGACCAAGCGAGAGAGTCTAGAAACTTCAAAAGAGAGGGGGAGGACTGAACCCCCAAAAGAAAACGTCAATGTACAGAAGAAACAAAGGATAAAAAGCTTGAAAGAAACTGAAAGCGAAAGCGAAAGCGAAAAGGAGGAACAAGTAGAAGAAGATAAACAAGTAGAAGAAGAAAATGATGAAGAAGGGGAAGCTGAGACAGCAGTAGATGAAGATTCGAGTTCATCGACGAGTCAACGAGATGAAAGACCAATGGATACTAAGAAGAGAAAAAAGGTTGGGGAAAAGGGAACGAAAGTAAGCACATAA

Protein sequence

MGERSVTKRESLETSKERGRTEPPKENVNVQKKQRIKSLKETESESESEKEEQVEEDKQVEEENDEEGEAETAVDEDSSSSTSQRDERPMDTKKRKKVGEKGTKVST
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C025169.2.1MELO3C025169.2.1mRNA


Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 36..59
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..47
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..107
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..107

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C025169.2Cucumber (Gy14) v2cgybmedB146
MELO3C025169.2Cucumber (Gy14) v2cgybmedB312
MELO3C025169.2Cucumber (Gy14) v1cgymedB304
MELO3C025169.2Cucumber (Gy14) v1cgymedB597
MELO3C025169.2Cucurbita maxima (Rimu)cmamedB238
MELO3C025169.2Cucurbita maxima (Rimu)cmamedB738
MELO3C025169.2Cucurbita maxima (Rimu)cmamedB741
MELO3C025169.2Cucurbita maxima (Rimu)cmamedB845
MELO3C025169.2Cucurbita moschata (Rifu)cmomedB733
MELO3C025169.2Cucurbita moschata (Rifu)cmomedB736
MELO3C025169.2Cucurbita moschata (Rifu)cmomedB839
MELO3C025169.2Cucurbita pepo (Zucchini)cpemedB436
MELO3C025169.2Cucurbita pepo (Zucchini)cpemedB440
MELO3C025169.2Cucurbita pepo (Zucchini)cpemedB931
MELO3C025169.2Wild cucumber (PI 183967)cpimedB163
MELO3C025169.2Wild cucumber (PI 183967)cpimedB352
MELO3C025169.2Cucumber (Chinese Long) v2cumedB163
MELO3C025169.2Cucumber (Chinese Long) v2cumedB350
MELO3C025169.2Melon (DHL92) v3.6.1medmedB030
MELO3C025169.2Bottle gourd (USVL1VR-Ls)lsimedB246
MELO3C025169.2Bottle gourd (USVL1VR-Ls)lsimedB297
MELO3C025169.2Watermelon (Charleston Gray)medwcgB040
MELO3C025169.2Watermelon (Charleston Gray)medwcgB064
MELO3C025169.2Watermelon (97103) v1medwmB045
MELO3C025169.2Watermelon (97103) v1medwmB054
MELO3C025169.2Silver-seed gourdcarmedB0091
MELO3C025169.2Silver-seed gourdcarmedB0672
MELO3C025169.2Cucumber (Chinese Long) v3cucmedB165
MELO3C025169.2Cucumber (Chinese Long) v3cucmedB362
MELO3C025169.2Watermelon (97103) v2medwmbB040
MELO3C025169.2Watermelon (97103) v2medwmbB061
MELO3C025169.2Wax gourdmedwgoB051
MELO3C025169.2Wax gourdmedwgoB083