MELO3C025138.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C025138.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Description17.5 kDa class I heat shock protein
Locationchr10 : 9051676 .. 9051861 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCGGCTGGAGGCGGCGGAGGAACGTGTTCTTCGACCCCTTCGCATTGGAGAACTGGGATTCATCTGAAGAAACAGCCTCTGCTTTCATGGACACTCAAATCGACTGGAAAGAGACGCCAAATGCTCACATCTTCAAGGAGAATCTTCCTGGTTTGAAAATAGAAGAAGTGAATGGATGTTAA

mRNA sequence

ATGACCGGCTGGAGGCGGCGGAGGAACGTGTTCTTCGACCCCTTCGCATTGGAGAACTGGGATTCATCTGAAGAAACAGCCTCTGCTTTCATGGACACTCAAATCGACTGGAAAGAGACGCCAAATGCTCACATCTTCAAGGAGAATCTTCCTGGTTTGAAAATAGAAGAAGTGAATGGATGTTAA

Coding sequence (CDS)

ATGACCGGCTGGAGGCGGCGGAGGAACGTGTTCTTCGACCCCTTCGCATTGGAGAACTGGGATTCATCTGAAGAAACAGCCTCTGCTTTCATGGACACTCAAATCGACTGGAAAGAGACGCCAAATGCTCACATCTTCAAGGAGAATCTTCCTGGTTTGAAAATAGAAGAAGTGAATGGATGTTAA

Protein sequence

MTGWRRRRNVFFDPFALENWDSSEETASAFMDTQIDWKETPNAHIFKENLPGLKIEEVNGC
BLAST of MELO3C025138.2 vs. NCBI nr
Match: XP_004150237.2 (PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis sativus] >KGN50619.1 hypothetical protein Csa_5G197110 [Cucumis sativus])

HSP 1 Score: 114.4 bits (285), Expect = 1.4e-22
Identity = 53/59 (89.83%), Postives = 55/59 (93.22%), Query Frame = 0

Query: 1   MTGWRRRRNVFFDPFALENWDSSEETASAFMDTQIDWKETPNAHIFKENLPGLKIEEVN 60
           MTG RRRRN+FFDPF LENWDSSEETASAFM TQIDWKETPNAHIFK +LPGLKIEEVN
Sbjct: 53  MTGGRRRRNMFFDPFVLENWDSSEETASAFMVTQIDWKETPNAHIFKADLPGLKIEEVN 111

BLAST of MELO3C025138.2 vs. NCBI nr
Match: KZM91942.1 (hypothetical protein DCAR_020693 [Daucus carota subsp. sativus])

HSP 1 Score: 70.9 bits (172), Expect = 1.7e-09
Identity = 32/54 (59.26%), Postives = 43/54 (79.63%), Query Frame = 0

Query: 7  RRNVFFDPFALENWDSSE--ETASAFMDTQIDWKETPNAHIFKENLPGLKIEEV 59
          +R+  FDPF+L+ WD S+  +  SAF++T+IDWKETP AH+FK +LPGLK EEV
Sbjct: 11 QRSNIFDPFSLDIWDPSDLGKETSAFVNTRIDWKETPEAHVFKADLPGLKKEEV 64

BLAST of MELO3C025138.2 vs. NCBI nr
Match: XP_006424969.1 (18.1 kDa class I heat shock protein [Citrus clementina] >XP_006488428.1 18.1 kDa class I heat shock protein [Citrus sinensis] >ESR38209.1 hypothetical protein CICLE_v10029495mg [Citrus clementina] >KDO66698.1 hypothetical protein CISIN_1g031937mg [Citrus sinensis] >GAY37959.1 hypothetical protein CUMW_033020 [Citrus unshiu])

HSP 1 Score: 69.7 bits (169), Expect = 3.9e-09
Identity = 31/58 (53.45%), Postives = 43/58 (74.14%), Query Frame = 0

Query: 6  RRRNVFFDPFALENWDSSE-----ETASAFMDTQIDWKETPNAHIFKENLPGLKIEEV 59
          +RR+  FDPF+L+ WD S      +  SAF++T++DWKETP AH+FK +LPG+K EEV
Sbjct: 10 KRRSSVFDPFSLDVWDFSSSSQFPQETSAFVNTRVDWKETPEAHVFKADLPGVKKEEV 67

BLAST of MELO3C025138.2 vs. NCBI nr
Match: XP_019261477.1 (PREDICTED: 17.6 kDa class I heat shock protein-like [Nicotiana attenuata] >OIT38460.1 17.6 kda class i heat shock protein [Nicotiana attenuata])

HSP 1 Score: 69.3 bits (168), Expect = 5.1e-09
Identity = 31/61 (50.82%), Postives = 42/61 (68.85%), Query Frame = 0

Query: 7  RRNVFFDPFALENWD---------SSEETASAFMDTQIDWKETPNAHIFKENLPGLKIEE 59
          RR++ FDPF+++ WD         S+    SAF +T++DWKETP AH+FK +LPGLK EE
Sbjct: 11 RRSIVFDPFSIDVWDPFRELGFPGSNSRETSAFANTRVDWKETPEAHVFKADLPGLKKEE 70

BLAST of MELO3C025138.2 vs. NCBI nr
Match: XP_019158556.1 (PREDICTED: 17.5 kDa class I heat shock protein-like [Ipomoea nil])

HSP 1 Score: 69.3 bits (168), Expect = 5.1e-09
Identity = 33/61 (54.10%), Postives = 43/61 (70.49%), Query Frame = 0

Query: 3  GWRRRRNVFFDPFALENWD-----SSEETASAFMDTQIDWKETPNAHIFKENLPGLKIEE 59
          G RR  NV  DPF+L+ WD     S+    SAF++T++DWKETP AH+FK ++PGLK EE
Sbjct: 9  GGRRNGNVSDDPFSLDVWDLSFPFSASGETSAFVNTRVDWKETPEAHVFKADVPGLKKEE 68

BLAST of MELO3C025138.2 vs. TAIR10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 63.2 bits (152), Expect = 6.6e-11
Identity = 29/60 (48.33%), Postives = 40/60 (66.67%), Query Frame = 0

Query: 7  RRNVFFDPFALENWDSSEETA--------SAFMDTQIDWKETPNAHIFKENLPGLKIEEV 59
          RR+  FDPF+L+ WD  +E          SA ++ ++DW+ETP AH+FK +LPGLK EEV
Sbjct: 12 RRSNIFDPFSLDVWDPFKELTSSSLSRENSAIVNARVDWRETPEAHVFKADLPGLKKEEV 71

BLAST of MELO3C025138.2 vs. TAIR10
Match: AT1G59860.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 62.0 bits (149), Expect = 1.5e-10
Identity = 29/60 (48.33%), Postives = 40/60 (66.67%), Query Frame = 0

Query: 5  RRRRNVFFDPFALENWDSSEE------TASAFMDTQIDWKETPNAHIFKENLPGLKIEEV 59
          RR  N  FDPF+L+ WD  +E      ++SA  + ++DWKET  AH+FK +LPG+K EEV
Sbjct: 12 RRINNNIFDPFSLDVWDPFKELQFPSSSSSAIANARVDWKETAEAHVFKADLPGMKKEEV 71

BLAST of MELO3C025138.2 vs. TAIR10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 61.6 bits (148), Expect = 1.9e-10
Identity = 30/65 (46.15%), Postives = 39/65 (60.00%), Query Frame = 0

Query: 3  GWRRRRNVFFDPFALENWDSSEE---------TASAFMDTQIDWKETPNAHIFKENLPGL 59
          G  RR N  FDPF+L+ WD  +E           SA  + ++DWKET  AH+FK +LPG+
Sbjct: 9  GNNRRSNSIFDPFSLDVWDPFKELQFPSSLSGETSAITNARVDWKETAEAHVFKADLPGM 68

BLAST of MELO3C025138.2 vs. TAIR10
Match: AT3G46230.1 (heat shock protein 17.4)

HSP 1 Score: 60.5 bits (145), Expect = 4.3e-10
Identity = 30/65 (46.15%), Postives = 41/65 (63.08%), Query Frame = 0

Query: 6  RRRNVFFDPFALENWDSSE------------ETASAFMDTQIDWKETPNAHIFKENLPGL 59
          RR NV FDPF+L+ WD  E            +  +AF + ++DW+ETP AH+FK ++PGL
Sbjct: 11 RRTNV-FDPFSLDVWDPFEGFLTPGLTNAPAKDVAAFTNAKVDWRETPEAHVFKADVPGL 70

BLAST of MELO3C025138.2 vs. TAIR10
Match: AT5G59720.1 (heat shock protein 18.2)

HSP 1 Score: 59.7 bits (143), Expect = 7.3e-10
Identity = 29/67 (43.28%), Postives = 39/67 (58.21%), Query Frame = 0

Query: 7  RRNVFFDPFALENWD---------------SSEETASAFMDTQIDWKETPNAHIFKENLP 59
          RR+  FDPF+ + WD               S+    +AF + ++DWKETP AH+FK +LP
Sbjct: 11 RRSNVFDPFSQDLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKETPEAHVFKADLP 70

BLAST of MELO3C025138.2 vs. Swiss-Prot
Match: sp|P02519|HSP11_SOYBN (17.3 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.3-B PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 2.4e-10
Identity = 31/61 (50.82%), Postives = 40/61 (65.57%), Query Frame = 0

Query: 7  RRNVFFDPFALENWD---------SSEETASAFMDTQIDWKETPNAHIFKENLPGLKIEE 59
          RR+  FDPF+L+ WD         S     SAF+ T++DWKETP AH+FK ++PGLK EE
Sbjct: 11 RRSSVFDPFSLDVWDPFKDFPFPSSLSAENSAFVSTRVDWKETPEAHVFKADIPGLKKEE 70

BLAST of MELO3C025138.2 vs. Swiss-Prot
Match: sp|P04794|HSP14_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.5-E PE=3 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 3.1e-10
Identity = 31/62 (50.00%), Postives = 40/62 (64.52%), Query Frame = 0

Query: 7  RRNVFFDPFALENWD----------SSEETASAFMDTQIDWKETPNAHIFKENLPGLKIE 59
          RR+  FDPF+L+ WD          S     SAF+ T++DWKETP AH+FK ++PGLK E
Sbjct: 11 RRSNVFDPFSLDMWDPFKDFHVPTSSVSAENSAFVSTRVDWKETPEAHVFKADIPGLKKE 70

BLAST of MELO3C025138.2 vs. Swiss-Prot
Match: sp|O82011|HSP11_SOLPE (17.7 kDa class I heat shock protein OS=Solanum peruvianum OX=4082 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 4.1e-10
Identity = 31/62 (50.00%), Postives = 41/62 (66.13%), Query Frame = 0

Query: 6  RRRNVFFDPFALENWDSSEE---------TASAFMDTQIDWKETPNAHIFKENLPGLKIE 59
          RR +  FDPF+++ +D   E           SAF +T+IDWKETP AH+FK +LPGLK+E
Sbjct: 11 RRSSSMFDPFSIDVFDPFRELGFPGTNSGETSAFANTRIDWKETPEAHVFKADLPGLKLE 70

BLAST of MELO3C025138.2 vs. Swiss-Prot
Match: sp|P27396|HSP11_DAUCA (17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 5.3e-10
Identity = 34/66 (51.52%), Postives = 42/66 (63.64%), Query Frame = 0

Query: 7  RRNVFFDPFALENWDS--------------SEETASAFMDTQIDWKETPNAHIFKENLPG 59
          RR+  FDPF+L+ WD                +ETA AF++T IDWKETP AH+FK +LPG
Sbjct: 11 RRSNVFDPFSLDVWDPFKDFPLVTSSASEFGKETA-AFVNTHIDWKETPQAHVFKADLPG 70

BLAST of MELO3C025138.2 vs. Swiss-Prot
Match: sp|P19243|HSP11_PEA (18.1 kDa class I heat shock protein OS=Pisum sativum OX=3888 GN=HSP18.1 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 7.0e-10
Identity = 33/66 (50.00%), Postives = 43/66 (65.15%), Query Frame = 0

Query: 7  RRNVFFDPFALENWD--------SSEETAS------AFMDTQIDWKETPNAHIFKENLPG 59
          RR+  FDPF+L+ WD        +S  +AS      AF+ T++DWKETP AH+FK +LPG
Sbjct: 11 RRSNVFDPFSLDVWDPLKDFPFSNSSPSASFPRENPAFVSTRVDWKETPEAHVFKADLPG 70

BLAST of MELO3C025138.2 vs. TrEMBL
Match: tr|A0A0A0KP16|A0A0A0KP16_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G197110 PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 9.1e-23
Identity = 53/59 (89.83%), Postives = 55/59 (93.22%), Query Frame = 0

Query: 1   MTGWRRRRNVFFDPFALENWDSSEETASAFMDTQIDWKETPNAHIFKENLPGLKIEEVN 60
           MTG RRRRN+FFDPF LENWDSSEETASAFM TQIDWKETPNAHIFK +LPGLKIEEVN
Sbjct: 53  MTGGRRRRNMFFDPFVLENWDSSEETASAFMVTQIDWKETPNAHIFKADLPGLKIEEVN 111

BLAST of MELO3C025138.2 vs. TrEMBL
Match: tr|A0A161ZVA1|A0A161ZVA1_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_020693 PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.2e-09
Identity = 32/54 (59.26%), Postives = 43/54 (79.63%), Query Frame = 0

Query: 7  RRNVFFDPFALENWDSSE--ETASAFMDTQIDWKETPNAHIFKENLPGLKIEEV 59
          +R+  FDPF+L+ WD S+  +  SAF++T+IDWKETP AH+FK +LPGLK EEV
Sbjct: 11 QRSNIFDPFSLDIWDPSDLGKETSAFVNTRIDWKETPEAHVFKADLPGLKKEEV 64

BLAST of MELO3C025138.2 vs. TrEMBL
Match: tr|V4UFW5|V4UFW5_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10029495mg PE=3 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.6e-09
Identity = 31/58 (53.45%), Postives = 43/58 (74.14%), Query Frame = 0

Query: 6  RRRNVFFDPFALENWDSSE-----ETASAFMDTQIDWKETPNAHIFKENLPGLKIEEV 59
          +RR+  FDPF+L+ WD S      +  SAF++T++DWKETP AH+FK +LPG+K EEV
Sbjct: 10 KRRSSVFDPFSLDVWDFSSSSQFPQETSAFVNTRVDWKETPEAHVFKADLPGVKKEEV 67

BLAST of MELO3C025138.2 vs. TrEMBL
Match: tr|A0A2H5NCP3|A0A2H5NCP3_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_033020 PE=3 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.6e-09
Identity = 31/58 (53.45%), Postives = 43/58 (74.14%), Query Frame = 0

Query: 6  RRRNVFFDPFALENWDSSE-----ETASAFMDTQIDWKETPNAHIFKENLPGLKIEEV 59
          +RR+  FDPF+L+ WD S      +  SAF++T++DWKETP AH+FK +LPG+K EEV
Sbjct: 10 KRRSSVFDPFSLDVWDFSSSSQFPQETSAFVNTRVDWKETPEAHVFKADLPGVKKEEV 67

BLAST of MELO3C025138.2 vs. TrEMBL
Match: tr|A0A067FH96|A0A067FH96_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g031937mg PE=3 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.6e-09
Identity = 31/58 (53.45%), Postives = 43/58 (74.14%), Query Frame = 0

Query: 6  RRRNVFFDPFALENWDSSE-----ETASAFMDTQIDWKETPNAHIFKENLPGLKIEEV 59
          +RR+  FDPF+L+ WD S      +  SAF++T++DWKETP AH+FK +LPG+K EEV
Sbjct: 10 KRRSSVFDPFSLDVWDFSSSSQFPQETSAFVNTRVDWKETPEAHVFKADLPGVKKEEV 67

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004150237.21.4e-2289.83PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis sativus] >KGN50619.... [more]
KZM91942.11.7e-0959.26hypothetical protein DCAR_020693 [Daucus carota subsp. sativus][more]
XP_006424969.13.9e-0953.4518.1 kDa class I heat shock protein [Citrus clementina] >XP_006488428.1 18.1 kDa... [more]
XP_019261477.15.1e-0950.82PREDICTED: 17.6 kDa class I heat shock protein-like [Nicotiana attenuata] >OIT38... [more]
XP_019158556.15.1e-0954.10PREDICTED: 17.5 kDa class I heat shock protein-like [Ipomoea nil][more]
Match NameE-valueIdentityDescription
AT2G29500.16.6e-1148.33HSP20-like chaperones superfamily protein[more]
AT1G59860.11.5e-1048.33HSP20-like chaperones superfamily protein[more]
AT1G07400.11.9e-1046.15HSP20-like chaperones superfamily protein[more]
AT3G46230.14.3e-1046.15heat shock protein 17.4[more]
AT5G59720.17.3e-1043.28heat shock protein 18.2[more]
Match NameE-valueIdentityDescription
sp|P02519|HSP11_SOYBN2.4e-1050.8217.3 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.3-B PE=3 SV=... [more]
sp|P04794|HSP14_SOYBN3.1e-1050.0017.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.5-E PE=3 SV=... [more]
sp|O82011|HSP11_SOLPE4.1e-1050.0017.7 kDa class I heat shock protein OS=Solanum peruvianum OX=4082 PE=2 SV=1[more]
sp|P27396|HSP11_DAUCA5.3e-1051.5217.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1[more]
sp|P19243|HSP11_PEA7.0e-1050.0018.1 kDa class I heat shock protein OS=Pisum sativum OX=3888 GN=HSP18.1 PE=1 SV=... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0KP16|A0A0A0KP16_CUCSA9.1e-2389.83Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G197110 PE=3 SV=1[more]
tr|A0A161ZVA1|A0A161ZVA1_DAUCA1.2e-0959.26Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_020693 ... [more]
tr|V4UFW5|V4UFW5_9ROSI2.6e-0953.45Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10029495mg PE=3 ... [more]
tr|A0A2H5NCP3|A0A2H5NCP3_CITUN2.6e-0953.45Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_033020 PE=3 SV=1[more]
tr|A0A067FH96|A0A067FH96_CITSI2.6e-0953.45Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g031937mg PE=3 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008978HSP20-like_chaperone
IPR031107HSP20
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C025138.2.1MELO3C025138.2.1mRNA


Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031107Small heat shock protein HSP20PANTHERPTHR11527SMALL HEAT-SHOCK PROTEIN HSP20 FAMILYcoord: 19..58
NoneNo IPR availablePANTHERPTHR11527:SF24117.4 KDA CLASS I HEAT SHOCK PROTEIN-RELATEDcoord: 19..58
IPR008978HSP20-like chaperoneSUPERFAMILYSSF49764HSP20-like chaperonescoord: 9..59

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C025138.2Bhi07G000564Wax gourdmedwgoB080
MELO3C025138.2Bhi07G000553Wax gourdmedwgoB083
MELO3C025138.2CsaV3_5G008760Cucumber (Chinese Long) v3cucmedB370
The following gene(s) are paralogous to this gene:

None