MELO3C025084 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C025084
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionHistone-lysine N-methyltransferase, H3 lysine-9 specific SUVH7
Locationchr9 : 14552350 .. 14552757 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAACATCCACTATATGTACGATGTCCCTATTGTACCTGCTCCAGTTCAGAGGAGACGTCCTTTAGTGCAAGAGCCCGATCAATTGGAAGAAGTTGACCAACACGGGAAAGAAGTGCCTCCCATGACACAGACACAGACACAAAGCGAGCATAGTTATGTTAGTCCAGTAATGATGATGGCAACATTTGGAACGACATATTATGATTCAGGAGTCGGTCAATCGTCAGACTTTGGAATAGAATATTACAATTCAGAGGCAGGTCAATCATCAACGGACTTTGGGCAACAATATTATGATTTAGGAAGTTATCCATCGTCTTCATACATGCATGGTCACGGGCGTGGTCGTGGAGAACATAATGAATATTTGTACTCCGAAGTGCCTGCAGCGATACCCGAGTAA

mRNA sequence

ATGGAGAACATCCACTATATGTACGATGTCCCTATTGTACCTGCTCCAGTTCAGAGGAGACGTCCTTTAGTGCAAGAGCCCGATCAATTGGAAGAAGTTGACCAACACGGGAAAGAAGTGCCTCCCATGACACAGACACAGACACAAAGCGAGCATAGTTATGTTAGTCCAGTAATGATGATGGCAACATTTGGAACGACATATTATGATTCAGGAGTCGGTCAATCGTCAGACTTTGGAATAGAATATTACAATTCAGAGGCAGGTCAATCATCAACGGACTTTGGGCAACAATATTATGATTTAGGAAGTTATCCATCGTCTTCATACATGCATGGTCACGGGCGTGGTCGTGGAGAACATAATGAATATTTGTACTCCGAAGTGCCTGCAGCGATACCCGAGTAA

Coding sequence (CDS)

ATGGAGAACATCCACTATATGTACGATGTCCCTATTGTACCTGCTCCAGTTCAGAGGAGACGTCCTTTAGTGCAAGAGCCCGATCAATTGGAAGAAGTTGACCAACACGGGAAAGAAGTGCCTCCCATGACACAGACACAGACACAAAGCGAGCATAGTTATGTTAGTCCAGTAATGATGATGGCAACATTTGGAACGACATATTATGATTCAGGAGTCGGTCAATCGTCAGACTTTGGAATAGAATATTACAATTCAGAGGCAGGTCAATCATCAACGGACTTTGGGCAACAATATTATGATTTAGGAAGTTATCCATCGTCTTCATACATGCATGGTCACGGGCGTGGTCGTGGAGAACATAATGAATATTTGTACTCCGAAGTGCCTGCAGCGATACCCGAGTAA

Protein sequence

MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMTQTQTQSEHSYVSPVMMMATFGTTYYDSGVGQSSDFGIEYYNSEAGQSSTDFGQQYYDLGSYPSSSYMHGHGRGRGEHNEYLYSEVPAAIPE*
Homology
[Close]
BLAST of MELO3C025084 vs. NCBI nr
Match: gi|659069376|ref|XP_008449513.1| (PREDICTED: GATA zinc finger domain-containing protein 10-like [Cucumis melo])

HSP 1 Score: 261.9 bits (668), Expect = 6.1e-67
Identity = 124/135 (91.85%), Postives = 128/135 (94.81%), Query Frame = 1 

Query: 1   MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMTQTQTQSEHSYVSPVMM 60
           MENIHYMYDVPIVPAPVQRRRPLVQE DQLEEVDQHG+EVPPMTQTQTQSEH+YVSPVMM
Sbjct: 77  MENIHYMYDVPIVPAPVQRRRPLVQESDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMM 136

Query: 61  MATFGTTYYDSGVGQSSDFGIEYYNSEAGQSSTDFGQQYYDLGSYPSSSYMHGHGRGRGE 120
           M TFG TYYDSGVGQSSDFG  YYNSEAGQSSTDFGQQYYDLGS PSSSYMHGHGRGRGE
Sbjct: 137 MPTFGMTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSSSYMHGHGRGRGE 196

Query: 121 HNEYLYSEVPAAIPE 136
           HNEYLY +VPAA+PE
Sbjct: 197 HNEYLYYKVPAAVPE 211

[Close]
BLAST of MELO3C025084 vs. NCBI nr
Match: gi|778688386|ref|XP_011652738.1| (PREDICTED: uncharacterized protein LOC105435074 [Cucumis sativus])

HSP 1 Score: 104.8 bits (260), Expect = 1.2e-19
Identity = 54/71 (76.06%), Postives = 59/71 (83.10%), Query Frame = 1 

Query: 28  DQLEEVDQHGKEVPPMTQTQTQSEHSYVSPVMMMATFGTTYYDSGVGQSSDFGIEYYNSE 87
           DQLEEVDQ+ +EV P+TQTQ  SEH YVS VMMM TFGTTYYD GVGQSSDF   YYNSE
Sbjct: 169 DQLEEVDQNVEEVAPVTQTQ--SEHGYVSLVMMMPTFGTTYYDYGVGQSSDFRTWYYNSE 228

Query: 88  AGQSSTDFGQQ 99
           AG SS++FGQQ
Sbjct: 229 AGSSSSNFGQQ 237

[Close]
BLAST of MELO3C025084 vs. NCBI nr
Match: gi|659123450|ref|XP_008461670.1| (PREDICTED: CASP-like protein RCOM_0464280 isoform X1 [Cucumis melo])

HSP 1 Score: 66.6 bits (161), Expect = 3.8e-08
Identity = 33/41 (80.49%), Postives = 36/41 (87.80%), Query Frame = 1 

Query: 1   MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVP 42
           MENIHYMY+V IVPA VQRRRPLVQE +QLEEV QH +EVP
Sbjct: 189 MENIHYMYNVLIVPALVQRRRPLVQESNQLEEVVQHVEEVP 229

[Close]
BLAST of MELO3C025084 vs. NCBI nr
Match: gi|659123452|ref|XP_008461671.1| (PREDICTED: CASP-like protein RCOM_0464280 isoform X2 [Cucumis melo])

HSP 1 Score: 66.6 bits (161), Expect = 3.8e-08
Identity = 33/41 (80.49%), Postives = 36/41 (87.80%), Query Frame = 1 

Query: 1   MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVP 42
           MENIHYMY+V IVPA VQRRRPLVQE +QLEEV QH +EVP
Sbjct: 182 MENIHYMYNVLIVPALVQRRRPLVQESNQLEEVVQHVEEVP 222

The following BLAST results are available for this feature:
BLAST of MELO3C025084 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659069376|ref|XP_008449513.1|6.1e-6791.85PREDICTED: GATA zinc finger domain-containing protein 10-like [Cucumis melo][more]
gi|778688386|ref|XP_011652738.1|1.2e-1976.06PREDICTED: uncharacterized protein LOC105435074 [Cucumis sativus][more]
gi|659123450|ref|XP_008461670.1|3.8e-0880.49PREDICTED: CASP-like protein RCOM_0464280 isoform X1 [Cucumis melo][more]
gi|659123452|ref|XP_008461671.1|3.8e-0880.49PREDICTED: CASP-like protein RCOM_0464280 isoform X2 [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C025084T1MELO3C025084T1mRNA