MELO3C025066 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C025066
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionPhotosystem I P700 chlorophyll a apoprotein A1
Locationchr9 : 14868147 .. 14868964 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTAGGCTCTTTAACCATTATTGTAGCTCACCATATGTATGCAATGCCCCCTTATCCATATCTAGCTACCGACTATGGTACACAACTTTTATTGTTCACACATCACATGTGGATTGGTGGATTTCTCATAGTTGGTGCTGCTGCGCATGCAGCCATTTTTATGGTAAGAGACTATGATCCAACTACTCGCTACAACGATCTATTAGATCGTGTACTTAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTGCTGCGCATGCAGCCATTTTTATGGTAAGAGACTATGATCCAACTACTCGCTACAACGATCTATTAGATCGTGTACTTAGGCATCGTGATGCAATCATATCACATCTGAACTGGGTGTGTATATTTTTAGGCTTTCACAGTTTTGGTTTGTATATTCATAACGATACCATGAGTGCTTTAGGGCATCCCCAAGATATGTTTTCAGATACCGCTATACAATTACAAACCGTCTTTGCTCAATGGATACAAAACACCCATACTTTAGCACCTAGTATAACGGCCCCTGGTGCAACAACAGGCACCAGTTTGACTTGGGGGGGTGGTGATTTAGACCTTGCTGAAAATTTTATCTCAAAAACAGCTAAAGCAACTTTCATTTAA

mRNA sequence

ATGTTAGGCTCTTTAACCATTATTGTAGCTCACCATATGTATGCAATGCCCCCTTATCCATATCTAGCTACCGACTATGGTACACAACTTTTATTGTTCACACATCACATGTGGATTGGTGGATTTCTCATAGTTGGTGCTGCTGCGCATGCAGCCATTTTTATGGTAAGAGACTATGATCCAACTACTCGCTACAACGATCTATTAGATCATCGTGTACTTAGGCATCGTGATGCAATCATATCACATCTGAACTGGGTGTGTATATTTTTAGGCTTTCACAGTTTTGGTTTGTATATTCATAACGATACCATGAGTGCTTTAGGGCATCCCCAAGATATGTTTTCAGATACCGCTATACAATTACAAACCGTCTTTGCTCAATGGATACAAAACACCCATACTTTAGCACCTAGTATAACGGCCCCTGGTGCAACAACAGGCACCAGTTTGACTTGGGGGGGTGGTGATTTAGACCTTGCTGAAAATTTTATCTCAAAAACAGCTAAAGCAACTTTCATTTAA

Coding sequence (CDS)

ATGTTAGGCTCTTTAACCATTATTGTAGCTCACCATATGTATGCAATGCCCCCTTATCCATATCTAGCTACCGACTATGGTACACAACTTTTATTGTTCACACATCACATGTGGATTGGTGGATTTCTCATAGTTGGTGCTGCTGCGCATGCAGCCATTTTTATGGTAAGAGACTATGATCCAACTACTCGCTACAACGATCTATTAGATCATCGTGTACTTAGGCATCGTGATGCAATCATATCACATCTGAACTGGGTGTGTATATTTTTAGGCTTTCACAGTTTTGGTTTGTATATTCATAACGATACCATGAGTGCTTTAGGGCATCCCCAAGATATGTTTTCAGATACCGCTATACAATTACAAACCGTCTTTGCTCAATGGATACAAAACACCCATACTTTAGCACCTAGTATAACGGCCCCTGGTGCAACAACAGGCACCAGTTTGACTTGGGGGGGTGGTGATTTAGACCTTGCTGAAAATTTTATCTCAAAAACAGCTAAAGCAACTTTCATTTAA

Protein sequence

MLGSLTIIVAHHMYAMPPYPYLATDYGTQLLLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDHRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAIQLQTVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDLDLAENFISKTAKATFI*
Homology
[Close]
BLAST of MELO3C025066 vs. Swiss-Prot
Match: PSAA_CUCSA (Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis sativus GN=psaA PE=3 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 2.2e-85
Identity = 152/158 (96.20%), Postives = 150/158 (94.94%), Query Frame = 1 

Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLLLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTIIVAHHMYAMPPYPYLATDYGTQL LFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDHRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAI 120
           PTTRYNDLLD RVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALG PQDMFSDTAI
Sbjct: 416 PTTRYNDLLD-RVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAI 475

Query: 121 QLQTVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 159
           QLQ VFAQWIQNTH LAP ITAPGATTGTSLTWGGGDL
Sbjct: 476 QLQPVFAQWIQNTHALAPRITAPGATTGTSLTWGGGDL 512

[Close]
BLAST of MELO3C025066 vs. Swiss-Prot
Match: PSAA_LOTJA (Photosystem I P700 chlorophyll a apoprotein A1 OS=Lotus japonicus GN=psaA PE=3 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 3.7e-85
Identity = 151/166 (90.96%), Postives = 153/166 (92.17%), Query Frame = 1 

Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLLLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTIIVAHHMY+MPPYPYLATDYGTQL LFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIIVAHHMYSMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDHRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAI 120
           PTTRYNDLLD RVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALG PQDMFSDTAI
Sbjct: 416 PTTRYNDLLD-RVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAI 475

Query: 121 QLQTVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDLDLAENFIS 167
           QLQ +FAQWIQNTH LAP ITAPGATTGTSLTWGGGDL    N ++
Sbjct: 476 QLQPIFAQWIQNTHALAPGITAPGATTGTSLTWGGGDLVAVGNKVA 520

[Close]
BLAST of MELO3C025066 vs. Swiss-Prot
Match: PSAA_NYMAL (Photosystem I P700 chlorophyll a apoprotein A1 OS=Nymphaea alba GN=psaA PE=3 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 3.2e-84
Identity = 148/158 (93.67%), Postives = 149/158 (94.30%), Query Frame = 1 

Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLLLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTI+VAHHMY+MPPYPYLATDYGTQL LFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIVVAHHMYSMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDHRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAI 120
           PTTRYNDLLD RVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALG PQDMFSDTAI
Sbjct: 416 PTTRYNDLLD-RVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAI 475

Query: 121 QLQTVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 159
           QLQ +FAQWIQNTH LAPS TAPGAT GTSLTWGGGDL
Sbjct: 476 QLQPIFAQWIQNTHALAPSATAPGATAGTSLTWGGGDL 512

[Close]
BLAST of MELO3C025066 vs. Swiss-Prot
Match: PSAA_DAUCA (Photosystem I P700 chlorophyll a apoprotein A1 OS=Daucus carota GN=psaA PE=3 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 7.1e-84
Identity = 149/158 (94.30%), Postives = 148/158 (93.67%), Query Frame = 1 

Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLLLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTIIVAHHMY+MPPYPYLATDYGTQL LFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIIVAHHMYSMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDHRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAI 120
           PTTRYNDLLD RVLRHRDAIISHLNW CIFLGFHSFGLYIHNDTMSALG PQDMFSDTAI
Sbjct: 416 PTTRYNDLLD-RVLRHRDAIISHLNWACIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAI 475

Query: 121 QLQTVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 159
           QLQ VFAQWIQNTH LAPS TAPGATT TSLTWGGGDL
Sbjct: 476 QLQPVFAQWIQNTHALAPSATAPGATTSTSLTWGGGDL 512

[Close]
BLAST of MELO3C025066 vs. Swiss-Prot
Match: PSAA_GOSHI (Photosystem I P700 chlorophyll a apoprotein A1 OS=Gossypium hirsutum GN=psaA PE=3 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 9.2e-84
Identity = 148/158 (93.67%), Postives = 148/158 (93.67%), Query Frame = 1 

Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLLLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTI+VAHHMY+MPPYPYLATDYGTQL LFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIVVAHHMYSMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDHRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAI 120
           PTTRYNDLLD RVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALG PQDMFSDTAI
Sbjct: 416 PTTRYNDLLD-RVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAI 475

Query: 121 QLQTVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 159
           QLQ VFAQWIQNTHTLAP  TAPGAT  TSLTWGGGDL
Sbjct: 476 QLQPVFAQWIQNTHTLAPGATAPGATASTSLTWGGGDL 512

[Close]
BLAST of MELO3C025066 vs. TrEMBL
Match: G3ETY5_CUCME (Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis melo subsp. melo GN=psaA PE=3 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 1.7e-84
Identity = 154/158 (97.47%), Postives = 154/158 (97.47%), Query Frame = 1 

Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLLLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTIIVAHHMYAMPPYPYLATDYGTQL LFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDHRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAI 120
           PTTRYNDLLD RVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALG PQDMFSDTAI
Sbjct: 416 PTTRYNDLLD-RVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAI 475

Query: 121 QLQTVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 159
           QLQ VFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL
Sbjct: 476 QLQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 512

[Close]
BLAST of MELO3C025066 vs. TrEMBL
Match: A0A0S2IE18_9ROSI (Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucurbita argyrosperma subsp. sororia GN=psaA PE=3 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 6.4e-84
Identity = 153/158 (96.84%), Postives = 153/158 (96.84%), Query Frame = 1 

Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLLLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTIIVAHHMYAMPPYPYLATDYGTQL LFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDHRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAI 120
           PTTRYNDLLD RVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALG PQDMFSDTAI
Sbjct: 416 PTTRYNDLLD-RVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAI 475

Query: 121 QLQTVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 159
           QLQ VFAQWIQNTH LAPSITAPGATTGTSLTWGGGDL
Sbjct: 476 QLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGGDL 512

[Close]
BLAST of MELO3C025066 vs. TrEMBL
Match: A0A0S2IEW9_9ROSI (Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucurbita ficifolia GN=psaA PE=3 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 6.4e-84
Identity = 153/158 (96.84%), Postives = 153/158 (96.84%), Query Frame = 1 

Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLLLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTIIVAHHMYAMPPYPYLATDYGTQL LFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDHRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAI 120
           PTTRYNDLLD RVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALG PQDMFSDTAI
Sbjct: 416 PTTRYNDLLD-RVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAI 475

Query: 121 QLQTVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 159
           QLQ VFAQWIQNTH LAPSITAPGATTGTSLTWGGGDL
Sbjct: 476 QLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGGDL 512

[Close]
BLAST of MELO3C025066 vs. TrEMBL
Match: A0A0S2IGD5_CUCPE (Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucurbita pepo var. ozarkana GN=psaA PE=3 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 6.4e-84
Identity = 153/158 (96.84%), Postives = 153/158 (96.84%), Query Frame = 1 

Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLLLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTIIVAHHMYAMPPYPYLATDYGTQL LFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDHRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAI 120
           PTTRYNDLLD RVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALG PQDMFSDTAI
Sbjct: 416 PTTRYNDLLD-RVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAI 475

Query: 121 QLQTVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 159
           QLQ VFAQWIQNTH LAPSITAPGATTGTSLTWGGGDL
Sbjct: 476 QLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGGDL 512

[Close]
BLAST of MELO3C025066 vs. TrEMBL
Match: X2F275_LAGSI (Photosystem I P700 apoprotein A1 (Fragment) OS=Lagenaria siceraria GN=psaA PE=3 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 6.4e-84
Identity = 153/158 (96.84%), Postives = 153/158 (96.84%), Query Frame = 1 

Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLLLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTIIVAHHMYAMPPYPYLATDYGTQL LFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDHRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAI 120
           PTTRYNDLLD RVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALG PQDMFSDTAI
Sbjct: 416 PTTRYNDLLD-RVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAI 475

Query: 121 QLQTVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 159
           QLQ VFAQWIQNTH LAPSITAPGATTGTSLTWGGGDL
Sbjct: 476 QLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGGDL 512

[Close]
BLAST of MELO3C025066 vs. TAIR10
Match: ATCG00350.1 (ATCG00350.1 Photosystem I, PsaA/PsaB protein)

HSP 1 Score: 303.1 bits (775), Expect = 1.1e-82
Identity = 144/158 (91.14%), Postives = 145/158 (91.77%), Query Frame = 1 

Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLLLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTIIVAHHMY+MPPYPYLATDY TQL LFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIIVAHHMYSMPPYPYLATDYATQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDHRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAI 120
           PT RYNDLLD RVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALG PQDMFSDTAI
Sbjct: 416 PTNRYNDLLD-RVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAI 475

Query: 121 QLQTVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 159
           QLQ VFAQWIQNTH LAP +TAPG T  TSLTWGGG+L
Sbjct: 476 QLQPVFAQWIQNTHALAPGVTAPGETASTSLTWGGGEL 512

[Close]
BLAST of MELO3C025066 vs. TAIR10
Match: ATCG00340.1 (ATCG00340.1 Photosystem I, PsaA/PsaB protein)

HSP 1 Score: 149.1 bits (375), Expect = 2.6e-36
Identity = 77/181 (42.54%), Postives = 110/181 (60.77%), Query Frame = 1 

Query: 2   LGSLTIIVAHHMYAMPPYPYLATDYGTQLLLFTHHMWIGGFLIVGAAAHAAIFMVRDYDP 61
           LG +T +VA HMY++P Y ++A D+ TQ  L+THH +I GF++ GA AH AIF +RDY+P
Sbjct: 341 LGVITSLVAQHMYSLPAYAFIAQDFTTQAALYTHHQYIAGFIMTGAFAHGAIFFIRDYNP 400

Query: 62  TTRYNDLLDHRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAIQ 121
               +++L  R+L H++AIISHL+W  +FLGFH+ GLY+HND M A G P+       I 
Sbjct: 401 EQNEDNVL-ARMLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQ-----IL 460

Query: 122 LQTVFAQWIQNTH--------TLAPSITAPGATTGTSLTWGGGDLDLAENFISKTAKATF 175
           ++ +FAQWIQ+ H         L  S + P    G S+ W  G L    N I++ + + F
Sbjct: 461 IEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSI-WLPGWL----NAINENSNSLF 510

[Close]
BLAST of MELO3C025066 vs. NCBI nr
Match: gi|346578191|ref|YP_004841783.1| (photosystem I P700 apoprotein A1 [Cucumis melo subsp. melo])

HSP 1 Score: 320.1 bits (819), Expect = 2.4e-84
Identity = 154/158 (97.47%), Postives = 154/158 (97.47%), Query Frame = 1 

Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLLLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTIIVAHHMYAMPPYPYLATDYGTQL LFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDHRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAI 120
           PTTRYNDLLD RVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALG PQDMFSDTAI
Sbjct: 416 PTTRYNDLLD-RVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAI 475

Query: 121 QLQTVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 159
           QLQ VFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL
Sbjct: 476 QLQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 512

[Close]
BLAST of MELO3C025066 vs. NCBI nr
Match: gi|952954702|gb|ALO22061.1| (PsaA (plastid) [Cucurbita ecuadorensis])

HSP 1 Score: 318.2 bits (814), Expect = 9.2e-84
Identity = 153/158 (96.84%), Postives = 153/158 (96.84%), Query Frame = 1 

Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLLLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTIIVAHHMYAMPPYPYLATDYGTQL LFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDHRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAI 120
           PTTRYNDLLD RVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALG PQDMFSDTAI
Sbjct: 416 PTTRYNDLLD-RVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAI 475

Query: 121 QLQTVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 159
           QLQ VFAQWIQNTH LAPSITAPGATTGTSLTWGGGDL
Sbjct: 476 QLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGGDL 512

[Close]
BLAST of MELO3C025066 vs. NCBI nr
Match: gi|595645454|gb|AHM88913.1| (photosystem I P700 apoprotein A1 (chloroplast) [Lagenaria siceraria])

HSP 1 Score: 318.2 bits (814), Expect = 9.2e-84
Identity = 153/158 (96.84%), Postives = 153/158 (96.84%), Query Frame = 1 

Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLLLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTIIVAHHMYAMPPYPYLATDYGTQL LFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDHRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAI 120
           PTTRYNDLLD RVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALG PQDMFSDTAI
Sbjct: 416 PTTRYNDLLD-RVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAI 475

Query: 121 QLQTVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 159
           QLQ VFAQWIQNTH LAPSITAPGATTGTSLTWGGGDL
Sbjct: 476 QLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGGDL 512

[Close]
BLAST of MELO3C025066 vs. NCBI nr
Match: gi|952954403|gb|ALO21767.1| (PsaA (plastid) [Cucurbita argyrosperma])

HSP 1 Score: 318.2 bits (814), Expect = 9.2e-84
Identity = 153/158 (96.84%), Postives = 153/158 (96.84%), Query Frame = 1 

Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLLLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTIIVAHHMYAMPPYPYLATDYGTQL LFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDHRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAI 120
           PTTRYNDLLD RVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALG PQDMFSDTAI
Sbjct: 416 PTTRYNDLLD-RVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAI 475

Query: 121 QLQTVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 159
           QLQ VFAQWIQNTH LAPSITAPGATTGTSLTWGGGDL
Sbjct: 476 QLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGGDL 512

[Close]
BLAST of MELO3C025066 vs. NCBI nr
Match: gi|595647674|gb|AHM91096.1| (photosystem I P700 apoprotein A1 (chloroplast) [Lagenaria siceraria])

HSP 1 Score: 318.2 bits (814), Expect = 9.2e-84
Identity = 153/158 (96.84%), Postives = 153/158 (96.84%), Query Frame = 1 

Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLLLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTIIVAHHMYAMPPYPYLATDYGTQL LFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDHRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAI 120
           PTTRYNDLLD RVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALG PQDMFSDTAI
Sbjct: 416 PTTRYNDLLD-RVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAI 475

Query: 121 QLQTVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 159
           QLQ VFAQWIQNTH LAPSITAPGATTGTSLTWGGGDL
Sbjct: 476 QLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGGDL 512

The following BLAST results are available for this feature:
BLAST of MELO3C025066 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PSAA_CUCSA2.2e-8596.20Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis sativus GN=psaA PE=3 S... [more]
PSAA_LOTJA3.7e-8590.96Photosystem I P700 chlorophyll a apoprotein A1 OS=Lotus japonicus GN=psaA PE=3 S... [more]
PSAA_NYMAL3.2e-8493.67Photosystem I P700 chlorophyll a apoprotein A1 OS=Nymphaea alba GN=psaA PE=3 SV=... [more]
PSAA_DAUCA7.1e-8494.30Photosystem I P700 chlorophyll a apoprotein A1 OS=Daucus carota GN=psaA PE=3 SV=... [more]
PSAA_GOSHI9.2e-8493.67Photosystem I P700 chlorophyll a apoprotein A1 OS=Gossypium hirsutum GN=psaA PE=... [more]
BLAST of MELO3C025066 vs. TrEMBL
Match NameE-valueIdentityDescription
G3ETY5_CUCME1.7e-8497.47Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis melo subsp. melo GN=ps... [more]
A0A0S2IE18_9ROSI6.4e-8496.84Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucurbita argyrosperma subsp. ... [more]
A0A0S2IEW9_9ROSI6.4e-8496.84Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucurbita ficifolia GN=psaA PE... [more]
A0A0S2IGD5_CUCPE6.4e-8496.84Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucurbita pepo var. ozarkana G... [more]
X2F275_LAGSI6.4e-8496.84Photosystem I P700 apoprotein A1 (Fragment) OS=Lagenaria siceraria GN=psaA PE=3 ... [more]
BLAST of MELO3C025066 vs. TAIR10
Match NameE-valueIdentityDescription
ATCG00350.11.1e-8291.14ATCG00350.1 Photosystem I, PsaA/PsaB protein[more]
ATCG00340.12.6e-3642.54ATCG00340.1 Photosystem I, PsaA/PsaB protein[more]
BLAST of MELO3C025066 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|346578191|ref|YP_004841783.1|2.4e-8497.47photosystem I P700 apoprotein A1 [Cucumis melo subsp. melo][more]
gi|952954702|gb|ALO22061.1|9.2e-8496.84PsaA (plastid) [Cucurbita ecuadorensis][more]
gi|595645454|gb|AHM88913.1|9.2e-8496.84photosystem I P700 apoprotein A1 (chloroplast) [Lagenaria siceraria][more]
gi|952954403|gb|ALO21767.1|9.2e-8496.84PsaA (plastid) [Cucurbita argyrosperma][more]
gi|595647674|gb|AHM91096.1|9.2e-8496.84photosystem I P700 apoprotein A1 (chloroplast) [Lagenaria siceraria][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001280PSI_PsaA/B
Vocabulary: Cellular Component
TermDefinition
GO:0009522photosystem I
GO:0009579thylakoid
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0015979photosynthesis
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0015979 photosynthesis
biological_process GO:0018298 protein-chromophore linkage
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009522 photosystem I
cellular_component GO:0009579 thylakoid
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding
molecular_function GO:0016168 chlorophyll binding
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0016491 oxidoreductase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU44440melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C025066T1MELO3C025066T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU44440MU44440transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001280Photosystem I PsaA/PsaBPRINTSPR00257PHOTSYSPSAABcoord: 30..56
score: 9.4E-26coord: 79..101
score: 9.4
IPR001280Photosystem I PsaA/PsaBGENE3DG3DSA:1.20.1130.10coord: 1..164
score: 1.0
IPR001280Photosystem I PsaA/PsaBPFAMPF00223PsaA_PsaBcoord: 1..158
score: 7.2
IPR001280Photosystem I PsaA/PsaBunknownSSF81558Photosystem I subunits PsaA/PsaBcoord: 1..166
score: 8.24
NoneNo IPR availablePANTHERPTHR30128OUTER MEMBRANE PROTEIN, OMPA-RELATEDcoord: 1..158
score: 2.4
NoneNo IPR availablePANTHERPTHR30128:SF8PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A1coord: 1..158
score: 2.4

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C025066Cucumber (Chinese Long) v3cucmeB352
MELO3C025066Cucumber (Chinese Long) v3cucmeB364
MELO3C025066Watermelon (97103) v2mewmbB009
MELO3C025066Wax gourdmewgoB017
MELO3C025066Cucurbita maxima (Rimu)cmameB252
MELO3C025066Cucurbita maxima (Rimu)cmameB635
MELO3C025066Cucurbita moschata (Rifu)cmomeB240
MELO3C025066Cucurbita moschata (Rifu)cmomeB625
MELO3C025066Wild cucumber (PI 183967)cpimeB345
MELO3C025066Wild cucumber (PI 183967)cpimeB356
MELO3C025066Cucumber (Chinese Long) v2cumeB352
MELO3C025066Cucumber (Chinese Long) v2cumeB365
MELO3C025066Watermelon (Charleston Gray)mewcgB019
MELO3C025066Watermelon (97103) v1mewmB032
MELO3C025066Cucurbita pepo (Zucchini)cpemeB157
MELO3C025066Cucurbita pepo (Zucchini)cpemeB359
MELO3C025066Bottle gourd (USVL1VR-Ls)lsimeB013
MELO3C025066Cucumber (Gy14) v2cgybmeB295
MELO3C025066Cucumber (Gy14) v2cgybmeB304
MELO3C025066Silver-seed gourdcarmeB0531
MELO3C025066Silver-seed gourdcarmeB0821