MELO3C024985 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C024985
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Myosin XI, putative
Location	chr3 : 17488530 .. 17488712 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACCTAGAAGAGGCAAAAGCTCAAGAGATGGAAAAGTTACAAAATTCTTTGCAAGAACTGCAGACTAAAGTTGATGAAACTAACTCATTGCTCATAAAGGAGCGAGAGGCTGCAAAGAAGGCTGTTGAAGAAGCACCTCCTGTTATTCAAGAAACCCAAGTTCTGGTTGAAGATACCTAG

mRNA sequence

ATGAACCTAGAAGAGGCAAAAGCTCAAGAGATGGAAAAGTTACAAAATTCTTTGCAAGAACTGCAGACTAAAGTTGATGAAACTAACTCATTGCTCATAAAGGAGCGAGAGGCTGCAAAGAAGGCTGTTGAAGAAGCACCTCCTGTTATTCAAGAAACCCAAGTTCTGGTTGAAGATACCTAG

Coding sequence (CDS)

ATGAACCTAGAAGAGGCAAAAGCTCAAGAGATGGAAAAGTTACAAAATTCTTTGCAAGAACTGCAGACTAAAGTTGATGAAACTAACTCATTGCTCATAAAGGAGCGAGAGGCTGCAAAGAAGGCTGTTGAAGAAGCACCTCCTGTTATTCAAGAAACCCAAGTTCTGGTTGAAGATACCTAG

Protein sequence

MNLEEAKAQEMEKLQNSLQELQTKVDETNSLLIKEREAAKKAVEEAPPVIQETQVLVEDT*

Homology

[Close]

BLAST of MELO3C024985 vs. Swiss-Prot
Match: MYO11_ARATH (Myosin-11 OS=Arabidopsis thaliana GN=XI-E PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 3.1e-18
Identity = 44/60 (73.33%), Postives = 53/60 (88.33%), Query Frame = 1


Query: 1   MNLEEAKAQEMEKLQNSLQELQTKVDETNSLLIKEREAAKKAVEEAPPVIQETQVLVEDT 60
           ++LEE K QE++KLQ+SL+E++ KVDETN LL+KEREAAKKA+EEAPPV+ ETQVLVEDT
Sbjct: 916 VDLEEEKNQEIKKLQSSLEEMRKKVDETNGLLVKEREAAKKAIEEAPPVVTETQVLVEDT 975

[Close]

BLAST of MELO3C024985 vs. Swiss-Prot
Match: MYO9_ARATH (Myosin-9 OS=Arabidopsis thaliana GN=XI-C PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 2.0e-17
Identity = 43/59 (72.88%), Postives = 52/59 (88.14%), Query Frame = 1


Query: 2   NLEEAKAQEMEKLQNSLQELQTKVDETNSLLIKEREAAKKAVEEAPPVIQETQVLVEDT 61
           +LEEAK QE+ KL++S +E++ KVDETN+LL+KEREAAKKA EEAPPVI+ETQ+LVEDT
Sbjct: 922 DLEEAKTQEILKLKSSFEEMRKKVDETNALLLKEREAAKKAAEEAPPVIKETQILVEDT 980

[Close]

BLAST of MELO3C024985 vs. Swiss-Prot
Match: MYO17_ARATH (Myosin-17 OS=Arabidopsis thaliana GN=XI-K PE=1 SV=2)

HSP 1 Score: 75.1 bits (183), Expect = 3.0e-13
Identity = 36/58 (62.07%), Postives = 46/58 (79.31%), Query Frame = 1


Query: 3   LEEAKAQEMEKLQNSLQELQTKVDETNSLLIKEREAAKKAVEEAPPVIQETQVLVEDT 61
           LEEAK QE  K Q +L+ ++ +V+E N+ +I+EREAA+KA+EEAPPVI+ET VLVEDT
Sbjct: 915 LEEAKTQEYAKQQEALETMRLQVEEANAAVIREREAARKAIEEAPPVIKETPVLVEDT 972

[Close]

BLAST of MELO3C024985 vs. Swiss-Prot
Match: MYO12_ARATH (Myosin-12 OS=Arabidopsis thaliana GN=XI-F PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 4.7e-11
Identity = 31/55 (56.36%), Postives = 44/55 (80.00%), Query Frame = 1


Query: 2   NLEEAKAQEMEKLQNSLQELQTKVDETNSLLIKEREAAKKAVEEAPPVIQETQVL 57
           +LE+AKAQE+ KLQN+L ELQ K+DE  + +I+++EAAK A+E+APP+I+E  V+
Sbjct: 913 DLEDAKAQEIAKLQNNLTELQEKLDEAYAAIIRDKEAAKLAIEQAPPIIKEVPVV 967

[Close]

BLAST of MELO3C024985 vs. Swiss-Prot
Match: MYO6_ARATH (Myosin-6 OS=Arabidopsis thaliana GN=XI-2 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 4.4e-09
Identity = 34/58 (58.62%), Postives = 41/58 (70.69%), Query Frame = 1


Query: 2   NLEEAKAQEMEKLQNSLQELQTKVDETNSLLIKEREAAKKAVEEAPPVIQETQVLVED 60
           +LEEAK QE  K Q+SL+ELQ K  ET +LLIKEREAAKK  E A P+I+E  V+ ++
Sbjct: 913 DLEEAKKQESAKAQSSLEELQLKCKETEALLIKEREAAKKIAETA-PIIKEIPVVDQE 969

[Close]

BLAST of MELO3C024985 vs. TrEMBL
Match: A0A0A0LG65_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G010140 PE=3 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 3.0e-20
Identity = 54/59 (91.53%), Postives = 57/59 (96.61%), Query Frame = 1


Query: 2   NLEEAKAQEMEKLQNSLQELQTKVDETNSLLIKEREAAKKAVEEAPPVIQETQVLVEDT 61
           +LEEAKAQE+ KLQNSLQELQTKVDETNSLL+KEREA KKAVEEAPPVIQETQVLVEDT
Sbjct: 915 DLEEAKAQEIGKLQNSLQELQTKVDETNSLLVKEREAVKKAVEEAPPVIQETQVLVEDT 973

[Close]

BLAST of MELO3C024985 vs. TrEMBL
Match: W9RCE5_9ROSA (Myosin-J heavy chain OS=Morus notabilis GN=L484_013118 PE=3 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 4.3e-19
Identity = 50/59 (84.75%), Postives = 57/59 (96.61%), Query Frame = 1


Query: 2   NLEEAKAQEMEKLQNSLQELQTKVDETNSLLIKEREAAKKAVEEAPPVIQETQVLVEDT 61
           +LEEAKAQE+ KLQNSLQE+Q KVDETN+LL+KEREAAKKA+EEAPPVI+ETQVLVEDT
Sbjct: 915 DLEEAKAQEVTKLQNSLQEMQNKVDETNALLVKEREAAKKAIEEAPPVIKETQVLVEDT 973

[Close]

BLAST of MELO3C024985 vs. TrEMBL
Match: V7BMM4_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G103900g PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 3.6e-18
Identity = 48/59 (81.36%), Postives = 55/59 (93.22%), Query Frame = 1


Query: 2   NLEEAKAQEMEKLQNSLQELQTKVDETNSLLIKEREAAKKAVEEAPPVIQETQVLVEDT 61
           NLEE+KAQE+ KLQN LQE Q KVDETN+LLIKEREAA+KA+EEAPPV+QETQV+VEDT
Sbjct: 914 NLEESKAQEIAKLQNLLQETQNKVDETNALLIKEREAARKAIEEAPPVVQETQVIVEDT 972

[Close]

BLAST of MELO3C024985 vs. TrEMBL
Match: M4DQ14_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=3 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 8.1e-18
Identity = 48/59 (81.36%), Postives = 55/59 (93.22%), Query Frame = 1


Query: 2    NLEEAKAQEMEKLQNSLQELQTKVDETNSLLIKEREAAKKAVEEAPPVIQETQVLVEDT 61
            +LEEAK QE+ KLQNSL+E++ KVDETN+LL+KEREAAKKA EEAPPVIQETQVLVEDT
Sbjct: 1149 DLEEAKTQEITKLQNSLEEMRKKVDETNALLVKEREAAKKAAEEAPPVIQETQVLVEDT 1207

[Close]

BLAST of MELO3C024985 vs. TrEMBL
Match: F6HVL1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0081g00160 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.1e-17
Identity = 47/59 (79.66%), Postives = 56/59 (94.92%), Query Frame = 1


Query: 2   NLEEAKAQEMEKLQNSLQELQTKVDETNSLLIKEREAAKKAVEEAPPVIQETQVLVEDT 61
           +LEEAKAQE+ KLQNSLQ +QTKVDETN+LL+KEREAA+KA+EEAPPVI+ET V+VEDT
Sbjct: 907 DLEEAKAQEIAKLQNSLQAMQTKVDETNALLVKEREAARKAIEEAPPVIKETPVIVEDT 965

[Close]

BLAST of MELO3C024985 vs. TAIR10
Match: AT1G54560.1 (AT1G54560.1 Myosin family protein with Dil domain)

HSP 1 Score: 91.7 bits (226), Expect = 1.7e-19
Identity = 44/60 (73.33%), Postives = 53/60 (88.33%), Query Frame = 1


Query: 1   MNLEEAKAQEMEKLQNSLQELQTKVDETNSLLIKEREAAKKAVEEAPPVIQETQVLVEDT 60
           ++LEE K QE++KLQ+SL+E++ KVDETN LL+KEREAAKKA+EEAPPV+ ETQVLVEDT
Sbjct: 916 VDLEEEKNQEIKKLQSSLEEMRKKVDETNGLLVKEREAAKKAIEEAPPVVTETQVLVEDT 975

[Close]

BLAST of MELO3C024985 vs. TAIR10
Match: AT1G08730.1 (AT1G08730.1 Myosin family protein with Dil domain)

HSP 1 Score: 89.0 bits (219), Expect = 1.1e-18
Identity = 43/59 (72.88%), Postives = 52/59 (88.14%), Query Frame = 1


Query: 2   NLEEAKAQEMEKLQNSLQELQTKVDETNSLLIKEREAAKKAVEEAPPVIQETQVLVEDT 61
           +LEEAK QE+ KL++S +E++ KVDETN+LL+KEREAAKKA EEAPPVI+ETQ+LVEDT
Sbjct: 922 DLEEAKTQEILKLKSSFEEMRKKVDETNALLLKEREAAKKAAEEAPPVIKETQILVEDT 980

[Close]

BLAST of MELO3C024985 vs. TAIR10
Match: AT5G20490.1 (AT5G20490.1 Myosin family protein with Dil domain)

HSP 1 Score: 75.1 bits (183), Expect = 1.7e-14
Identity = 36/58 (62.07%), Postives = 46/58 (79.31%), Query Frame = 1


Query: 3   LEEAKAQEMEKLQNSLQELQTKVDETNSLLIKEREAAKKAVEEAPPVIQETQVLVEDT 61
           LEEAK QE  K Q +L+ ++ +V+E N+ +I+EREAA+KA+EEAPPVI+ET VLVEDT
Sbjct: 929 LEEAKTQEYAKQQEALETMRLQVEEANAAVIREREAARKAIEEAPPVIKETPVLVEDT 986

[Close]

BLAST of MELO3C024985 vs. TAIR10
Match: AT5G20470.1 (AT5G20470.1 myosin, putative)

HSP 1 Score: 73.6 bits (179), Expect = 4.9e-14
Identity = 35/59 (59.32%), Postives = 46/59 (77.97%), Query Frame = 1


Query: 2   NLEEAKAQEMEKLQNSLQELQTKVDETNSLLIKEREAAKKAVEEAPPVIQETQVLVEDT 61
           +LEEAK QE  K Q +LQ +  +V+E N+++++EREAA+KA+EEAPPVI+E  VLVEDT
Sbjct: 133 DLEEAKTQEYAKQQEALQAMWLQVEEANAVVVREREAARKAIEEAPPVIKEIPVLVEDT 191

[Close]

BLAST of MELO3C024985 vs. TAIR10
Match: AT2G31900.1 (AT2G31900.1 myosin-like protein XIF)

HSP 1 Score: 67.8 bits (164), Expect = 2.7e-12
Identity = 31/55 (56.36%), Postives = 44/55 (80.00%), Query Frame = 1


Query: 2   NLEEAKAQEMEKLQNSLQELQTKVDETNSLLIKEREAAKKAVEEAPPVIQETQVL 57
           +LE+AKAQE+ KLQN+L ELQ K+DE  + +I+++EAAK A+E+APP+I+E  V+
Sbjct: 913 DLEDAKAQEIAKLQNNLTELQEKLDEAYAAIIRDKEAAKLAIEQAPPIIKEVPVV 967

[Close]

BLAST of MELO3C024985 vs. NCBI nr
Match: gi|659070717|ref|XP_008456315.1| (PREDICTED: myosin-11 isoform X2 [Cucumis melo])

HSP 1 Score: 106.7 bits (265), Expect = 1.5e-20
Identity = 55/59 (93.22%), Postives = 58/59 (98.31%), Query Frame = 1


Query: 2   NLEEAKAQEMEKLQNSLQELQTKVDETNSLLIKEREAAKKAVEEAPPVIQETQVLVEDT 61
           +LEEAKAQE+ KLQNSLQELQTKVDETNSLL+KEREAAKKAVEEAPPVIQETQVLVEDT
Sbjct: 914 DLEEAKAQEIGKLQNSLQELQTKVDETNSLLVKEREAAKKAVEEAPPVIQETQVLVEDT 972

[Close]

BLAST of MELO3C024985 vs. NCBI nr
Match: gi|659070715|ref|XP_008456307.1| (PREDICTED: myosin-11 isoform X1 [Cucumis melo])

HSP 1 Score: 106.7 bits (265), Expect = 1.5e-20
Identity = 55/59 (93.22%), Postives = 58/59 (98.31%), Query Frame = 1


Query: 2   NLEEAKAQEMEKLQNSLQELQTKVDETNSLLIKEREAAKKAVEEAPPVIQETQVLVEDT 61
           +LEEAKAQE+ KLQNSLQELQTKVDETNSLL+KEREAAKKAVEEAPPVIQETQVLVEDT
Sbjct: 915 DLEEAKAQEIGKLQNSLQELQTKVDETNSLLVKEREAAKKAVEEAPPVIQETQVLVEDT 973

[Close]

BLAST of MELO3C024985 vs. NCBI nr
Match: gi|449442963|ref|XP_004139250.1| (PREDICTED: myosin-11 isoform X1 [Cucumis sativus])

HSP 1 Score: 105.1 bits (261), Expect = 4.3e-20
Identity = 54/59 (91.53%), Postives = 57/59 (96.61%), Query Frame = 1


Query: 2   NLEEAKAQEMEKLQNSLQELQTKVDETNSLLIKEREAAKKAVEEAPPVIQETQVLVEDT 61
           +LEEAKAQE+ KLQNSLQELQTKVDETNSLL+KEREA KKAVEEAPPVIQETQVLVEDT
Sbjct: 915 DLEEAKAQEIGKLQNSLQELQTKVDETNSLLVKEREAVKKAVEEAPPVIQETQVLVEDT 973

[Close]

BLAST of MELO3C024985 vs. NCBI nr
Match: gi|778666424|ref|XP_011648738.1| (PREDICTED: myosin-11 isoform X2 [Cucumis sativus])

HSP 1 Score: 105.1 bits (261), Expect = 4.3e-20
Identity = 54/59 (91.53%), Postives = 57/59 (96.61%), Query Frame = 1


Query: 2   NLEEAKAQEMEKLQNSLQELQTKVDETNSLLIKEREAAKKAVEEAPPVIQETQVLVEDT 61
           +LEEAKAQE+ KLQNSLQELQTKVDETNSLL+KEREA KKAVEEAPPVIQETQVLVEDT
Sbjct: 914 DLEEAKAQEIGKLQNSLQELQTKVDETNSLLVKEREAVKKAVEEAPPVIQETQVLVEDT 972

[Close]

BLAST of MELO3C024985 vs. NCBI nr
Match: gi|703098643|ref|XP_010096435.1| (Myosin-J heavy chain [Morus notabilis])

HSP 1 Score: 101.3 bits (251), Expect = 6.2e-19
Identity = 50/59 (84.75%), Postives = 57/59 (96.61%), Query Frame = 1


Query: 2   NLEEAKAQEMEKLQNSLQELQTKVDETNSLLIKEREAAKKAVEEAPPVIQETQVLVEDT 61
           +LEEAKAQE+ KLQNSLQE+Q KVDETN+LL+KEREAAKKA+EEAPPVI+ETQVLVEDT
Sbjct: 915 DLEEAKAQEVTKLQNSLQEMQNKVDETNALLVKEREAAKKAIEEAPPVIKETQVLVEDT 973

The following BLAST results are available for this feature:

BLAST of MELO3C024985 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MYO11_ARATH	3.1e-18	73.33	Myosin-11 OS=Arabidopsis thaliana GN=XI-E PE=3 SV=1	[more]
MYO9_ARATH	2.0e-17	72.88	Myosin-9 OS=Arabidopsis thaliana GN=XI-C PE=2 SV=1	[more]
MYO17_ARATH	3.0e-13	62.07	Myosin-17 OS=Arabidopsis thaliana GN=XI-K PE=1 SV=2	[more]
MYO12_ARATH	4.7e-11	56.36	Myosin-12 OS=Arabidopsis thaliana GN=XI-F PE=2 SV=1	[more]
MYO6_ARATH	4.4e-09	58.62	Myosin-6 OS=Arabidopsis thaliana GN=XI-2 PE=1 SV=1	[more]

BLAST of MELO3C024985 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LG65_CUCSA	3.0e-20	91.53	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G010140 PE=3 SV=1	[more]
W9RCE5_9ROSA	4.3e-19	84.75	Myosin-J heavy chain OS=Morus notabilis GN=L484_013118 PE=3 SV=1	[more]
V7BMM4_PHAVU	3.6e-18	81.36	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G103900g PE=3 SV=1	[more]
M4DQ14_BRARP	8.1e-18	81.36	Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=3 SV=1	[more]
F6HVL1_VITVI	1.1e-17	79.66	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0081g00160 PE=4 SV=...	[more]

BLAST of MELO3C024985 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G54560.1	1.7e-19	73.33	Myosin family protein with Dil domain	[more]
AT1G08730.1	1.1e-18	72.88	Myosin family protein with Dil domain	[more]
AT5G20490.1	1.7e-14	62.07	Myosin family protein with Dil domain	[more]
AT5G20470.1	4.9e-14	59.32	myosin, putative	[more]
AT2G31900.1	2.7e-12	56.36	myosin-like protein XIF	[more]

BLAST of MELO3C024985 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659070717\|ref\|XP_008456315.1\|	1.5e-20	93.22	PREDICTED: myosin-11 isoform X2 [Cucumis melo]	[more]
gi\|659070715\|ref\|XP_008456307.1\|	1.5e-20	93.22	PREDICTED: myosin-11 isoform X1 [Cucumis melo]	[more]
gi\|449442963\|ref\|XP_004139250.1\|	4.3e-20	91.53	PREDICTED: myosin-11 isoform X1 [Cucumis sativus]	[more]
gi\|778666424\|ref\|XP_011648738.1\|	4.3e-20	91.53	PREDICTED: myosin-11 isoform X2 [Cucumis sativus]	[more]
gi\|703098643\|ref\|XP_010096435.1\|	6.2e-19	84.75	Myosin-J heavy chain [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0007165	signal transduction
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016459	myosin complex
molecular_function	GO:0003779	actin binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003774	motor activity
molecular_function	GO:0004871	signal transducer activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU62889	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C024985T1	MELO3C024985T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU62889	MU62889	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 1..38 scor
None	No IPR available	PANTHER	PTHR13140	MYOSIN	coord: 1..59 score: 3.8
None	No IPR available	PANTHER	PTHR13140:SF390	MYOSIN-11-RELATED	coord: 1..59 score: 3.8

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C024985	Cucumber (Chinese Long) v3	cucmeB478
MELO3C024985	Watermelon (97103) v2	mewmbB304
MELO3C024985	Wax gourd	mewgoB347
MELO3C024985	Cucumber (Gy14) v1	cgymeB592
MELO3C024985	Cucurbita maxima (Rimu)	cmameB414
MELO3C024985	Cucurbita moschata (Rifu)	cmomeB401
MELO3C024985	Wild cucumber (PI 183967)	cpimeB468
MELO3C024985	Cucumber (Chinese Long) v2	cumeB415
MELO3C024985	Cucurbita pepo (Zucchini)	cpemeB512
MELO3C024985	Bottle gourd (USVL1VR-Ls)	lsimeB471
MELO3C024985	Cucumber (Gy14) v2	cgybmeB409