MELO3C024892.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C024892.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Description1-aminocyclopropane-1-carboxylate synthase
Locationchr01 : 11726660 .. 11726809 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAAATACAAGGAAACAAAATGAAATTCGACATGAACAAACTGGTGCTCACCGCTGGTGCAACTGCTGCCAATGAAATCATCATATCTTGTCTTGTTGATCCCGCTGAAGCCTTCCTTGTTCCCACTCCTTACTATCCAGGGTAA

mRNA sequence

ATGGAAGAAATACAAGGAAACAAAATGAAATTCGACATGAACAAACTGGTGCTCACCGCTGGTGCAACTGCTGCCAATGAAATCATCATATCTTGTCTTGTTGATCCCGCTGAAGCCTTCCTTGTTCCCACTCCTTACTATCCAGGGTAA

Coding sequence (CDS)

ATGGAAGAAATACAAGGAAACAAAATGAAATTCGACATGAACAAACTGGTGCTCACCGCTGGTGCAACTGCTGCCAATGAAATCATCATATCTTGTCTTGTTGATCCCGCTGAAGCCTTCCTTGTTCCCACTCCTTACTATCCAGGGTAA

Protein sequence

MEEIQGNKMKFDMNKLVLTAGATAANEIIISCLVDPAEAFLVPTPYYPG
BLAST of MELO3C024892.2 vs. NCBI nr
Match: ALN38792.1 (ACS11 [Cucumis melo])

HSP 1 Score: 94.7 bits (234), Expect = 9.0e-17
Identity = 44/49 (89.80%), Postives = 47/49 (95.92%), Query Frame = 0

Query: 1   MEEIQGNKMKFDMNKLVLTAGATAANEIIISCLVDPAEAFLVPTPYYPG 50
           MEEI+GNKMKF+MNKLVLTAGATAANEI+ISCL DP EAFLVPTPYYPG
Sbjct: 99  MEEIRGNKMKFEMNKLVLTAGATAANEILISCLADPGEAFLVPTPYYPG 147

BLAST of MELO3C024892.2 vs. NCBI nr
Match: XP_008445556.2 (PREDICTED: 1-aminocyclopropane-1-carboxylate synthase CMA101-like isoform X1 [Cucumis melo])

HSP 1 Score: 94.7 bits (234), Expect = 9.0e-17
Identity = 44/49 (89.80%), Postives = 47/49 (95.92%), Query Frame = 0

Query: 1   MEEIQGNKMKFDMNKLVLTAGATAANEIIISCLVDPAEAFLVPTPYYPG 50
           MEEI+GNKMKF+MNKLVLTAGATAANEI+ISCL DP EAFLVPTPYYPG
Sbjct: 100 MEEIRGNKMKFEMNKLVLTAGATAANEILISCLADPGEAFLVPTPYYPG 148

BLAST of MELO3C024892.2 vs. NCBI nr
Match: XP_016900038.1 (PREDICTED: 1-aminocyclopropane-1-carboxylate synthase CMA101-like isoform X2 [Cucumis melo])

HSP 1 Score: 94.7 bits (234), Expect = 9.0e-17
Identity = 44/49 (89.80%), Postives = 47/49 (95.92%), Query Frame = 0

Query: 1  MEEIQGNKMKFDMNKLVLTAGATAANEIIISCLVDPAEAFLVPTPYYPG 50
          MEEI+GNKMKF+MNKLVLTAGATAANEI+ISCL DP EAFLVPTPYYPG
Sbjct: 41 MEEIRGNKMKFEMNKLVLTAGATAANEILISCLADPGEAFLVPTPYYPG 89

BLAST of MELO3C024892.2 vs. NCBI nr
Match: KGN62418.1 (hypothetical protein Csa_2G353460 [Cucumis sativus] >ALN38791.1 ACS11 [Cucumis sativus])

HSP 1 Score: 93.2 bits (230), Expect = 2.6e-16
Identity = 44/49 (89.80%), Postives = 46/49 (93.88%), Query Frame = 0

Query: 1   MEEIQGNKMKFDMNKLVLTAGATAANEIIISCLVDPAEAFLVPTPYYPG 50
           MEEI+GNKMKF+ NKLVLTAGATAANEIIISCL DP EAFLVPTPYYPG
Sbjct: 99  MEEIRGNKMKFEKNKLVLTAGATAANEIIISCLADPGEAFLVPTPYYPG 147

BLAST of MELO3C024892.2 vs. NCBI nr
Match: XP_004142909.2 (PREDICTED: 1-aminocyclopropane-1-carboxylate synthase 3-like [Cucumis sativus])

HSP 1 Score: 93.2 bits (230), Expect = 2.6e-16
Identity = 44/49 (89.80%), Postives = 46/49 (93.88%), Query Frame = 0

Query: 1   MEEIQGNKMKFDMNKLVLTAGATAANEIIISCLVDPAEAFLVPTPYYPG 50
           MEEI+GNKMKF+ NKLVLTAGATAANEIIISCL DP EAFLVPTPYYPG
Sbjct: 100 MEEIRGNKMKFEKNKLVLTAGATAANEIIISCLADPGEAFLVPTPYYPG 148

BLAST of MELO3C024892.2 vs. TAIR10
Match: AT2G22810.1 (1-aminocyclopropane-1-carboxylate synthase 4)

HSP 1 Score: 73.9 bits (180), Expect = 3.0e-14
Identity = 32/49 (65.31%), Postives = 40/49 (81.63%), Query Frame = 0

Query: 1   MEEIQGNKMKFDMNKLVLTAGATAANEIIISCLVDPAEAFLVPTPYYPG 50
           M E +GN++ FD N LVLTAGAT+ANE ++ CL DP +AFL+PTPYYPG
Sbjct: 99  MSENRGNRVSFDSNNLVLTAGATSANETLMFCLADPGDAFLLPTPYYPG 147

BLAST of MELO3C024892.2 vs. TAIR10
Match: AT4G37770.1 (1-amino-cyclopropane-1-carboxylate synthase 8)

HSP 1 Score: 72.8 bits (177), Expect = 6.7e-14
Identity = 32/49 (65.31%), Postives = 40/49 (81.63%), Query Frame = 0

Query: 1   MEEIQGNKMKFDMNKLVLTAGATAANEIIISCLVDPAEAFLVPTPYYPG 50
           M E +GN++ F+ NKLVLTAGAT ANE ++ CL DP +AFL+PTPYYPG
Sbjct: 99  MSENRGNRVSFNPNKLVLTAGATPANETLMFCLADPGDAFLLPTPYYPG 147

BLAST of MELO3C024892.2 vs. TAIR10
Match: AT3G49700.1 (1-aminocyclopropane-1-carboxylate synthase 9)

HSP 1 Score: 72.4 bits (176), Expect = 8.7e-14
Identity = 30/49 (61.22%), Postives = 42/49 (85.71%), Query Frame = 0

Query: 1   MEEIQGNKMKFDMNKLVLTAGATAANEIIISCLVDPAEAFLVPTPYYPG 50
           MEEI+GN++ FD +K+VL AG+T+ANE ++ CL +P +AFL+PTPYYPG
Sbjct: 99  MEEIRGNRVTFDPSKIVLAAGSTSANETLMFCLAEPGDAFLLPTPYYPG 147

BLAST of MELO3C024892.2 vs. TAIR10
Match: AT5G65800.1 (ACC synthase 5)

HSP 1 Score: 72.0 bits (175), Expect = 1.1e-13
Identity = 30/49 (61.22%), Postives = 41/49 (83.67%), Query Frame = 0

Query: 1   MEEIQGNKMKFDMNKLVLTAGATAANEIIISCLVDPAEAFLVPTPYYPG 50
           MEEI+GN++ FD  K+VL AG+T+ANE ++ CL +P +AFL+PTPYYPG
Sbjct: 99  MEEIRGNRVTFDPKKIVLAAGSTSANETLMFCLAEPGDAFLLPTPYYPG 147

BLAST of MELO3C024892.2 vs. TAIR10
Match: AT4G08040.1 (1-aminocyclopropane-1-carboxylate synthase 11)

HSP 1 Score: 71.2 bits (173), Expect = 1.9e-13
Identity = 30/49 (61.22%), Postives = 41/49 (83.67%), Query Frame = 0

Query: 1   MEEIQGNKMKFDMNKLVLTAGATAANEIIISCLVDPAEAFLVPTPYYPG 50
           M +I+ NK+KFD NK+VLTAG+T+ANE ++ CL +P +AFL+P PYYPG
Sbjct: 97  MGKIRENKVKFDTNKMVLTAGSTSANETLMFCLANPGDAFLIPAPYYPG 145

BLAST of MELO3C024892.2 vs. Swiss-Prot
Match: sp|P37821|1A1C_MALDO (1-aminocyclopropane-1-carboxylate synthase OS=Malus domestica OX=3750 GN=ACS-1 PE=1 SV=2)

HSP 1 Score: 75.9 bits (185), Expect = 1.4e-13
Identity = 35/49 (71.43%), Postives = 39/49 (79.59%), Query Frame = 0

Query: 1   MEEIQGNKMKFDMNKLVLTAGATAANEIIISCLVDPAEAFLVPTPYYPG 50
           M EI+GNK+ FD N LVLTAGAT+ANE  I CL DP EA L+PTPYYPG
Sbjct: 99  MAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPG 147

BLAST of MELO3C024892.2 vs. Swiss-Prot
Match: sp|Q43309|1A14_ARATH (1-aminocyclopropane-1-carboxylate synthase 4 OS=Arabidopsis thaliana OX=3702 GN=ACS4 PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 5.4e-13
Identity = 32/49 (65.31%), Postives = 40/49 (81.63%), Query Frame = 0

Query: 1   MEEIQGNKMKFDMNKLVLTAGATAANEIIISCLVDPAEAFLVPTPYYPG 50
           M E +GN++ FD N LVLTAGAT+ANE ++ CL DP +AFL+PTPYYPG
Sbjct: 99  MSENRGNRVSFDSNNLVLTAGATSANETLMFCLADPGDAFLLPTPYYPG 147

BLAST of MELO3C024892.2 vs. Swiss-Prot
Match: sp|Q9T065|1A18_ARATH (1-aminocyclopropane-1-carboxylate synthase 8 OS=Arabidopsis thaliana OX=3702 GN=ACS8 PE=1 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 1.2e-12
Identity = 32/49 (65.31%), Postives = 40/49 (81.63%), Query Frame = 0

Query: 1   MEEIQGNKMKFDMNKLVLTAGATAANEIIISCLVDPAEAFLVPTPYYPG 50
           M E +GN++ F+ NKLVLTAGAT ANE ++ CL DP +AFL+PTPYYPG
Sbjct: 99  MSENRGNRVSFNPNKLVLTAGATPANETLMFCLADPGDAFLLPTPYYPG 147

BLAST of MELO3C024892.2 vs. Swiss-Prot
Match: sp|Q9M2Y8|1A19_ARATH (1-aminocyclopropane-1-carboxylate synthase 9 OS=Arabidopsis thaliana OX=3702 GN=ACS9 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.6e-12
Identity = 30/49 (61.22%), Postives = 42/49 (85.71%), Query Frame = 0

Query: 1   MEEIQGNKMKFDMNKLVLTAGATAANEIIISCLVDPAEAFLVPTPYYPG 50
           MEEI+GN++ FD +K+VL AG+T+ANE ++ CL +P +AFL+PTPYYPG
Sbjct: 99  MEEIRGNRVTFDPSKIVLAAGSTSANETLMFCLAEPGDAFLLPTPYYPG 147

BLAST of MELO3C024892.2 vs. Swiss-Prot
Match: sp|Q37001|1A15_ARATH (1-aminocyclopropane-1-carboxylate synthase 5 OS=Arabidopsis thaliana OX=3702 GN=ACS5 PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 2.1e-12
Identity = 30/49 (61.22%), Postives = 41/49 (83.67%), Query Frame = 0

Query: 1   MEEIQGNKMKFDMNKLVLTAGATAANEIIISCLVDPAEAFLVPTPYYPG 50
           MEEI+GN++ FD  K+VL AG+T+ANE ++ CL +P +AFL+PTPYYPG
Sbjct: 99  MEEIRGNRVTFDPKKIVLAAGSTSANETLMFCLAEPGDAFLLPTPYYPG 147

BLAST of MELO3C024892.2 vs. TrEMBL
Match: tr|A0A1S4DVP5|A0A1S4DVP5_CUCME (1-aminocyclopropane-1-carboxylate synthase CMA101-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488536 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 6.0e-17
Identity = 44/49 (89.80%), Postives = 47/49 (95.92%), Query Frame = 0

Query: 1  MEEIQGNKMKFDMNKLVLTAGATAANEIIISCLVDPAEAFLVPTPYYPG 50
          MEEI+GNKMKF+MNKLVLTAGATAANEI+ISCL DP EAFLVPTPYYPG
Sbjct: 41 MEEIRGNKMKFEMNKLVLTAGATAANEILISCLADPGEAFLVPTPYYPG 89

BLAST of MELO3C024892.2 vs. TrEMBL
Match: tr|A0A1S3BD08|A0A1S3BD08_CUCME (1-aminocyclopropane-1-carboxylate synthase CMA101-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488536 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 6.0e-17
Identity = 44/49 (89.80%), Postives = 47/49 (95.92%), Query Frame = 0

Query: 1   MEEIQGNKMKFDMNKLVLTAGATAANEIIISCLVDPAEAFLVPTPYYPG 50
           MEEI+GNKMKF+MNKLVLTAGATAANEI+ISCL DP EAFLVPTPYYPG
Sbjct: 100 MEEIRGNKMKFEMNKLVLTAGATAANEILISCLADPGEAFLVPTPYYPG 148

BLAST of MELO3C024892.2 vs. TrEMBL
Match: tr|A0A0S2C3P7|A0A0S2C3P7_CUCME (ACS11 OS=Cucumis melo OX=3656 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 6.0e-17
Identity = 44/49 (89.80%), Postives = 47/49 (95.92%), Query Frame = 0

Query: 1   MEEIQGNKMKFDMNKLVLTAGATAANEIIISCLVDPAEAFLVPTPYYPG 50
           MEEI+GNKMKF+MNKLVLTAGATAANEI+ISCL DP EAFLVPTPYYPG
Sbjct: 99  MEEIRGNKMKFEMNKLVLTAGATAANEILISCLADPGEAFLVPTPYYPG 147

BLAST of MELO3C024892.2 vs. TrEMBL
Match: tr|A0A0A0LKW1|A0A0A0LKW1_CUCSA (ACS11 OS=Cucumis sativus OX=3659 GN=Csa_2G353460 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.7e-16
Identity = 44/49 (89.80%), Postives = 46/49 (93.88%), Query Frame = 0

Query: 1   MEEIQGNKMKFDMNKLVLTAGATAANEIIISCLVDPAEAFLVPTPYYPG 50
           MEEI+GNKMKF+ NKLVLTAGATAANEIIISCL DP EAFLVPTPYYPG
Sbjct: 99  MEEIRGNKMKFEKNKLVLTAGATAANEIIISCLADPGEAFLVPTPYYPG 147

BLAST of MELO3C024892.2 vs. TrEMBL
Match: tr|A0A1Q3AQI6|A0A1Q3AQI6_CEPFO (Aminotran_1_2 domain-containing protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_01537 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 3.1e-13
Identity = 38/47 (80.85%), Postives = 42/47 (89.36%), Query Frame = 0

Query: 3   EIQGNKMKFDMNKLVLTAGATAANEIIISCLVDPAEAFLVPTPYYPG 50
           +I+GNK+KFD NKLVLTAGATAANE +I CL DP EAFLVPTPYYPG
Sbjct: 101 KIRGNKVKFDPNKLVLTAGATAANETLIFCLADPGEAFLVPTPYYPG 147

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
ALN38792.19.0e-1789.80ACS11 [Cucumis melo][more]
XP_008445556.29.0e-1789.80PREDICTED: 1-aminocyclopropane-1-carboxylate synthase CMA101-like isoform X1 [Cu... [more]
XP_016900038.19.0e-1789.80PREDICTED: 1-aminocyclopropane-1-carboxylate synthase CMA101-like isoform X2 [Cu... [more]
KGN62418.12.6e-1689.80hypothetical protein Csa_2G353460 [Cucumis sativus] >ALN38791.1 ACS11 [Cucumis s... [more]
XP_004142909.22.6e-1689.80PREDICTED: 1-aminocyclopropane-1-carboxylate synthase 3-like [Cucumis sativus][more]
Match NameE-valueIdentityDescription
AT2G22810.13.0e-1465.311-aminocyclopropane-1-carboxylate synthase 4[more]
AT4G37770.16.7e-1465.311-amino-cyclopropane-1-carboxylate synthase 8[more]
AT3G49700.18.7e-1461.221-aminocyclopropane-1-carboxylate synthase 9[more]
AT5G65800.11.1e-1361.22ACC synthase 5[more]
AT4G08040.11.9e-1361.221-aminocyclopropane-1-carboxylate synthase 11[more]
Match NameE-valueIdentityDescription
sp|P37821|1A1C_MALDO1.4e-1371.431-aminocyclopropane-1-carboxylate synthase OS=Malus domestica OX=3750 GN=ACS-1 P... [more]
sp|Q43309|1A14_ARATH5.4e-1365.311-aminocyclopropane-1-carboxylate synthase 4 OS=Arabidopsis thaliana OX=3702 GN=... [more]
sp|Q9T065|1A18_ARATH1.2e-1265.311-aminocyclopropane-1-carboxylate synthase 8 OS=Arabidopsis thaliana OX=3702 GN=... [more]
sp|Q9M2Y8|1A19_ARATH1.6e-1261.221-aminocyclopropane-1-carboxylate synthase 9 OS=Arabidopsis thaliana OX=3702 GN=... [more]
sp|Q37001|1A15_ARATH2.1e-1261.221-aminocyclopropane-1-carboxylate synthase 5 OS=Arabidopsis thaliana OX=3702 GN=... [more]
Match NameE-valueIdentityDescription
tr|A0A1S4DVP5|A0A1S4DVP5_CUCME6.0e-1789.801-aminocyclopropane-1-carboxylate synthase CMA101-like isoform X2 OS=Cucumis mel... [more]
tr|A0A1S3BD08|A0A1S3BD08_CUCME6.0e-1789.801-aminocyclopropane-1-carboxylate synthase CMA101-like isoform X1 OS=Cucumis mel... [more]
tr|A0A0S2C3P7|A0A0S2C3P7_CUCME6.0e-1789.80ACS11 OS=Cucumis melo OX=3656 PE=4 SV=1[more]
tr|A0A0A0LKW1|A0A0A0LKW1_CUCSA1.7e-1689.80ACS11 OS=Cucumis sativus OX=3659 GN=Csa_2G353460 PE=4 SV=1[more]
tr|A0A1Q3AQI6|A0A1Q3AQI6_CEPFO3.1e-1380.85Aminotran_1_2 domain-containing protein (Fragment) OS=Cephalotus follicularis OX... [more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0030170pyridoxal phosphate binding
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
Vocabulary: INTERPRO
TermDefinition
IPR015424PyrdxlP-dep_Trfase
IPR015421PyrdxlP-dep_Trfase_major
IPR004839Aminotransferase_I/II
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process
biological_process GO:0009058 biosynthetic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity
molecular_function GO:0003824 catalytic activity
molecular_function GO:0016829 lyase activity
molecular_function GO:0030170 pyridoxal phosphate binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C024892.2.1MELO3C024892.2.1mRNA


Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00753ACCSYNTHASEcoord: 15..35
score: 52.15
coord: 37..49
score: 44.49
NoneNo IPR availablePANTHERPTHR43795:SF101-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 4-RELATEDcoord: 1..49
NoneNo IPR availablePANTHERPTHR43795FAMILY NOT NAMEDcoord: 1..49
IPR004839Aminotransferase, class I/classIIPFAMPF00155Aminotran_1_2coord: 6..48
e-value: 1.3E-5
score: 24.5
IPR015421Pyridoxal phosphate-dependent transferase, major domainGENE3DG3DSA:3.40.640.10coord: 2..49
e-value: 1.0E-9
score: 39.6
IPR015424Pyridoxal phosphate-dependent transferaseSUPERFAMILYSSF53383PLP-dependent transferasescoord: 5..49

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None