MELO3C024863 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C024863
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Putative ribosome biogenesis GTPase RsgA
Location	chr7 : 16744660 .. 16746654 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAATATGAACATGGGGTTTTCCTCTGTTGGCAATGGATGATCTTCATCATCTTTTTCCAATCTCTCACATTTGGCGCCGCCTTTCACTCTTGATCGTTCGGTCACTCGACCTTTCTCCAACCCACTTGTAGATATGACCGAACCGAACCTTCATCTGTGGTTCCTTTGAACACTACAACTGCAGCTACAGTACACAATTGGCTCCCTTCCACCTCCAAAACCTCAGGCCTTGACTTCATTTCCAATACCTTTCCTGAATTTGATTGGTTATCCTTCTCTACTGGGTCTAAATACCCTAGGTCGCAGTCTATGATGGAGCCTTCTGATAACCACGGACCTCTTTTGGGCAGTCTTACAATGTCTTCAACCAACCCCTACCTATTCGGGAACGCCTCTAACGGACTAACAACTAGTATTGGCCAAGAGAAACCATACCATCCATCTTATGCATCAACTTCATGTAACAAAGGTGGTCCTATGGTCATTATTGATCAACCAACTTATGATTACCCATCCAACTCTCATGTTGTTGCATTCAATGTGCCCCCCTACGCGGACTTCTCGCATGGATCTTCACCTTCAGGCTTTGAGAGATCAGTTGAGGAGGCTGCACATTCTATTCATATGTTTGATCTGAATAAATGCTACGACTTTGTAAGAGAATGTCCAAGTGAGGAATTGTTATAAGAGCAGAACCTTAACATTGAGCAGCCTAAGAATTTAAGAATGTCTAACATGGATGCTCATTATGCATTTCCAGGATGACACCCTAAGACTGAGACTAGAACACCTTCAAATCCAGCTTCTAGTTTCCAGAACTCTCAATATCTACAAAATGCTCCATATCAGAAAATCTTGAGAGAGCAAGATGCTAGAGAGTGTGCCCTACATCGATTGCCAATTCTCCCAATACTCTTTCCATCCAAACACCTGTTCTTGGTACTGATTCTTTTATCTGGAACATTGGTCCATGCCATATTTCAGGTAATGGCGATCATTTCTTTGAAGGAAAACAAGGTGATGATCACCTTCGAAATCTAAAGAAGTCTTTTCCAGTTAACTCTGATAGCCAGGAATTCTTCGGTACGGAGAACCATGGAACATGTATATATAAGCATGACCCTATCATTCACGTCTTACAAAACAATGTACATTATGCTGAGGATTCACTAGATCATACATTGAAGGTTGAAATGGGAATTTACGTTCCTGATGCTAGTCCCCAATTTTGTCTGGACCTTAAAACAATTGAAACTGCCACAACTACTGAGAGTTCCTCTGAAAGTTTTGATCAGATCAACTTGGCAGCAGTAGACTCACCTTGCTGGAAAGGAGCTCCAATTAGTGGCGTTTCTCCTTTTCAAGCTTTTGAAATTAGTACTCCGAGTGATGTGAAGACGGTGGAAGTCAACAACGATGTGAAACTCTCCTTCTCTCAAGTACCTCCTTCTGCTGGGGATTCTATGGAAATTTCCGTTCATGAACCAAATGAAAGAACCATAGGGAGCATTCTGGAAAAAGGTGCAACATCTTCTGCAAAGATGCCTTCAATTGCTGATTCCTCCTTGCTTGCAACGCAGAAAACTAGAGATTATATGAAAGCAGGAGAATTTTATTCAGAAATGGGATGCTTTCATCCAACTACTGGTTGCATTCATGAACCAGTAGAAGATGGTGGTGACTTCTATTCTTCTTCCACGCCACAAAGTAAATATAAGAATAATCTACTGTCTGGAAAAAACATTACACCTACAAGTTACACGAAAAAGCACGAAGATGCAGGATTAAATAGCGACGACTCCCCTGCAAATGGTTTGAATCATTTGTCGTGTGATGTTGCAAAACACGTCCAGAATTTGCCTTTTAATCTTGTAAAGGTATTTCTTGGAGAATCGAACTCCAAAATTGATATCCGGATTCTGGTTGATACATTGCACAGTCTATCAGAATTGCTTCTTGTATGTCATTCAAATGGTTTGGCTCCATTACACTAA

mRNA sequence

ACAATATGAACATGGGGTTTTCCTCTGTTGGCAATGGATGATCTTCATCATCTTTTTCCAATCTCTCACATTTGGCGCCGCCTTTCACTCTTGATCGTTCGGTCACTCGACCTTTCTCCAACCCACTTGTAGATATGACCGAACCGAACCTTCATCTGTGGTTCCTTTGAACACTACAACTGCAGCTACAGTACACAATTGGCTCCCTTCCACCTCCAAAACCTCAGGCCTTGACTTCATTTCCAATACCTTTCCTGAATTTGATTGGTTATCCTTCTCTACTGGGTCTAAATACCCTAGGTCGCAGTCTATGATGGAGCCTTCTGATAACCACGGACCTCTTTTGGGCAGTCTTACAATGTCTTCAACCAACCCCTACCTATTCGGGAACGCCTCTAACGGACTAACAACTAGTATTGGCCAAGAGAAACCATACCATCCATCTTATGCATCAACTTCATGTAACAAAGGTGGTCCTATGGTCATTATTGATCAACCAACTTATGATTACCCATCCAACTCTCATGTTGTTGCATTCAATGTGCCCCCCTACGCGGACTTCTCGCATGGATCTTCACCTTCAGGCTTTGAGAGATCAGTTGAGGAGGCTGCACATTCTATTCATATGTTTGATCTGAATAAATGCTACGACTTTGTAAGAGAATGTCCAAGTAATGGCGATCATTTCTTTGAAGGAAAACAAGGTGATGATCACCTTCGAAATCTAAAGAAGTCTTTTCCAGTTAACTCTGATAGCCAGGAATTCTTCGGTACGGAGAACCATGGAACATGTATATATAAGCATGACCCTATCATTCACGTCTTACAAAACAATGTACATTATGCTGAGGATTCACTAGATCATACATTGAAGGTTGAAATGGGAATTTACGTTCCTGATGCTAGTCCCCAATTTTGTCTGGACCTTAAAACAATTGAAACTGCCACAACTACTGAGAGTTCCTCTGAAAGTTTTGATCAGATCAACTTGGCAGCAGTAGACTCACCTTGCTGGAAAGGAGCTCCAATTAGTGGCGTTTCTCCTTTTCAAGCTTTTGAAATTAGTACTCCGAGTGATGTGAAGACGGTGGAAGTCAACAACGATGTGAAACTCTCCTTCTCTCAAGTACCTCCTTCTGCTGGGGATTCTATGGAAATTTCCGTTCATGAACCAAATGAAAGAACCATAGGGAGCATTCTGGAAAAAGGTGCAACATCTTCTGCAAAGATGCCTTCAATTGCTGATTCCTCCTTGCTTGCAACGCAGAAAACTAGAGATTATATGAAAGCAGGAGAATTTTATTCAGAAATGGGATGCTTTCATCCAACTACTGGTTGCATTCATGAACCAGTAGAAGATGGTGGTGACTTCTATTCTTCTTCCACGCCACAAAGTAAATATAAGAATAATCTACTGTCTGGAAAAAACATTACACCTACAAGTTACACGAAAAAGCACGAAGATGCAGGATTAAATAGCGACGACTCCCCTGCAAATGGTTTGAATCATTTGTCGTGTGATGTTGCAAAACACGTCCAGAATTTGCCTTTTAATCTTGTAAAGGTATTTCTTGGAGAATCGAACTCCAAAATTGATATCCGGATTCTGGTTGATACATTGCACAGTCTATCAGAATTGCTTCTTGTATGTCATTCAAATGGTTTGGCTCCATTACACTAA

Coding sequence (CDS)

ATGATGGAGCCTTCTGATAACCACGGACCTCTTTTGGGCAGTCTTACAATGTCTTCAACCAACCCCTACCTATTCGGGAACGCCTCTAACGGACTAACAACTAGTATTGGCCAAGAGAAACCATACCATCCATCTTATGCATCAACTTCATGTAACAAAGGTGGTCCTATGGTCATTATTGATCAACCAACTTATGATTACCCATCCAACTCTCATGTTGTTGCATTCAATGTGCCCCCCTACGCGGACTTCTCGCATGGATCTTCACCTTCAGGCTTTGAGAGATCAGTTGAGGAGGCTGCACATTCTATTCATATGTTTGATCTGAATAAATGCTACGACTTTGTAAGAGAATGTCCAAGTAATGGCGATCATTTCTTTGAAGGAAAACAAGGTGATGATCACCTTCGAAATCTAAAGAAGTCTTTTCCAGTTAACTCTGATAGCCAGGAATTCTTCGGTACGGAGAACCATGGAACATGTATATATAAGCATGACCCTATCATTCACGTCTTACAAAACAATGTACATTATGCTGAGGATTCACTAGATCATACATTGAAGGTTGAAATGGGAATTTACGTTCCTGATGCTAGTCCCCAATTTTGTCTGGACCTTAAAACAATTGAAACTGCCACAACTACTGAGAGTTCCTCTGAAAGTTTTGATCAGATCAACTTGGCAGCAGTAGACTCACCTTGCTGGAAAGGAGCTCCAATTAGTGGCGTTTCTCCTTTTCAAGCTTTTGAAATTAGTACTCCGAGTGATGTGAAGACGGTGGAAGTCAACAACGATGTGAAACTCTCCTTCTCTCAAGTACCTCCTTCTGCTGGGGATTCTATGGAAATTTCCGTTCATGAACCAAATGAAAGAACCATAGGGAGCATTCTGGAAAAAGGTGCAACATCTTCTGCAAAGATGCCTTCAATTGCTGATTCCTCCTTGCTTGCAACGCAGAAAACTAGAGATTATATGAAAGCAGGAGAATTTTATTCAGAAATGGGATGCTTTCATCCAACTACTGGTTGCATTCATGAACCAGTAGAAGATGGTGGTGACTTCTATTCTTCTTCCACGCCACAAAGTAAATATAAGAATAATCTACTGTCTGGAAAAAACATTACACCTACAAGTTACACGAAAAAGCACGAAGATGCAGGATTAAATAGCGACGACTCCCCTGCAAATGGTTTGAATCATTTGTCGTGTGATGTTGCAAAACACGTCCAGAATTTGCCTTTTAATCTTGTAAAGGTATTTCTTGGAGAATCGAACTCCAAAATTGATATCCGGATTCTGGTTGATACATTGCACAGTCTATCAGAATTGCTTCTTGTATGTCATTCAAATGGTTTGGCTCCATTACACTAA

Protein sequence

MMEPSDNHGPLLGSLTMSSTNPYLFGNASNGLTTSIGQEKPYHPSYASTSCNKGGPMVIIDQPTYDYPSNSHVVAFNVPPYADFSHGSSPSGFERSVEEAAHSIHMFDLNKCYDFVRECPSNGDHFFEGKQGDDHLRNLKKSFPVNSDSQEFFGTENHGTCIYKHDPIIHVLQNNVHYAEDSLDHTLKVEMGIYVPDASPQFCLDLKTIETATTTESSSESFDQINLAAVDSPCWKGAPISGVSPFQAFEISTPSDVKTVEVNNDVKLSFSQVPPSAGDSMEISVHEPNERTIGSILEKGATSSAKMPSIADSSLLATQKTRDYMKAGEFYSEMGCFHPTTGCIHEPVEDGGDFYSSSTPQSKYKNNLLSGKNITPTSYTKKHEDAGLNSDDSPANGLNHLSCDVAKHVQNLPFNLVKVFLGESNSKIDIRILVDTLHSLSELLLVCHSNGLAPLH*

Homology

[Close]

BLAST of MELO3C024863 vs. TrEMBL
Match: A0A0A0KZ16_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G091890 PE=4 SV=1)

HSP 1 Score: 592.0 bits (1525), Expect = 6.0e-166
Identity = 301/337 (89.32%), Postives = 308/337 (91.39%), Query Frame = 1


Query: 122 NGDHFFEGKQGDDHLRNLKKSFPVNSDSQEFFGTENHGTCIYKHDPIIHVLQNNVHYAED 181
           NGDHFFEGKQG DHLRNLKKSFPVNSDSQEFF TENHGTCI KHDPIIHVLQNNVHYAE 
Sbjct: 328 NGDHFFEGKQGGDHLRNLKKSFPVNSDSQEFFSTENHGTCIDKHDPIIHVLQNNVHYAEG 387

Query: 182 SLDHTLKVEMGIYVPDASPQFCLDLKTIETATTTESSSESFDQINLAAVDSPCWKGAPIS 241
           S DHTLKV MG++VPDASPQF LDLKTIETATT ESSSESFDQ NLAAVDSPCWKGAPIS
Sbjct: 388 SPDHTLKVGMGLHVPDASPQFSLDLKTIETATT-ESSSESFDQYNLAAVDSPCWKGAPIS 447

Query: 242 GVSPFQAFEISTPSDVKTVEVNNDVKLSFSQVPPS-AGDSMEISVHEPNERTIGSILEKG 301
           GVSPFQAFEIST S VKTVEVNNDVKLS SQVPPS A DSME+SVHEPNE TIG  +EKG
Sbjct: 448 GVSPFQAFEISTSSHVKTVEVNNDVKLSLSQVPPSSAEDSMEVSVHEPNESTIGRFMEKG 507

Query: 302 ATSSAKMPSIADSSLLATQKTRDYMKAGEFYSEMGCFHPTTGCIHEPVEDGGDFYSS-ST 361
           ATSSAK+PSIADSSLLATQKTRD MKAGEFYSEMG FHPTTGCIHEPVEDGGD YSS S+
Sbjct: 508 ATSSAKLPSIADSSLLATQKTRDSMKAGEFYSEMGWFHPTTGCIHEPVEDGGDLYSSISS 567

Query: 362 PQSKYKNNLLSGKNITPTSYTKKHEDAGLNSDDSPANGLNHLSCDVAKHVQNLPFNLVKV 421
           PQSKYKNNLLSGK I PTSYTKKH DA LNSD+S  NGLNHLSCDVAKHVQNLPF LVKV
Sbjct: 568 PQSKYKNNLLSGKKIAPTSYTKKHADARLNSDNSSENGLNHLSCDVAKHVQNLPFELVKV 627

Query: 422 FLGESNSKIDIRILVDTLHSLSELLLVCHSNGLAPLH 457
           FLGESNSKIDIRILVDTLHSLSELLLVCHSNGLA LH
Sbjct: 628 FLGESNSKIDIRILVDTLHSLSELLLVCHSNGLAALH 663

[Close]

BLAST of MELO3C024863 vs. TrEMBL
Match: A0A0A0KZ16_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G091890 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.1e-58
Identity = 108/121 (89.26%), Postives = 114/121 (94.21%), Query Frame = 1


Query: 1   MMEPSDNHGPLLGSLTMSSTNPYLFGNASNGLTTSIGQEKPYHPSYASTSCNKGGPMVII 60
           MMEP DNHGPLLGS++MSST+P LFGN S+GLTT IGQEKPY+PSYASTSCNKGGPMVI+
Sbjct: 101 MMEPPDNHGPLLGSISMSSTDPSLFGNTSDGLTTGIGQEKPYYPSYASTSCNKGGPMVIV 160

Query: 61  DQPTYDYPSNSHVVAFNVPPYADFSHGSSPSGFERSVEEAAHSIHMFDLNKCYDFVRECP 120
           DQPTYDYPSNSHVVAFN PPY DFSHGSSPSGFERSVEEAAHSIHMFDLNKC DFVRECP
Sbjct: 161 DQPTYDYPSNSHVVAFNAPPYTDFSHGSSPSGFERSVEEAAHSIHMFDLNKCNDFVRECP 220

Query: 121 S 122
           S
Sbjct: 221 S 221

HSP 2 Score: 90.5 bits (223), Expect = 5.7e-15
Identity = 84/297 (28.28%), Postives = 134/297 (45.12%), Query Frame = 1


Query: 172 LQNNVHYAEDSLDHTLKVEMGIYVPDASPQFCLDLKTIETATTTESSSESFDQINLAAVD 231
           L +N + + D   H    +  I VP  S      +   E     ++ +ES D  N  AVD
Sbjct: 406 LSSNQNASMDVSGHFAGEKPVIQVPCTSLGGISLVDKNEAIDPAKNHTESLDHYN-PAVD 465

Query: 232 SPCWKGAPISGVSPFQAFEISTPSDVKTVEV-NNDVKLSFSQVPPSAGDSMEISVHEPNE 291
           SPCWKGAP+S  S  +  E  TP ++K +E  +      +     S+ D++++S  + +E
Sbjct: 466 SPCWKGAPVSNFSQLEVSEAVTPQNMKNLEACSGSNHQGYQTFSVSSDDAVKVSPEKTSE 525

Query: 292 RTI---GSILEKGATSSAKMPSIADSSLLATQKTRDYMKAGEFYSEMGCFHPTTGCIHEP 351
           ++I   G  LE  + SS K P +AD ++L  +    ++  G   ++   FH         
Sbjct: 526 KSIQQKGWSLENYSASSMKRP-LAD-NMLHREGIDHFVNFGANCTKPSLFHQVQISDDAL 585

Query: 352 VEDGGDFYSSSTPQSKYKNNLLSGKNITPTSYTK--KHEDAGLNSDDSPANGLNHLSCDV 411
                D  +   PQ++ K +  SGK  T ++        D G+N +D P    +H+    
Sbjct: 586 PNKSFDDSNGKLPQNE-KQSCESGKWTTESNSAPVISVADVGMNMNDDPDECSSHVPFHA 645

Query: 412 AKHVQNLP-------FNLVKVFLGESNSKIDIRILVDTLHSLSELLLVCHSNGLAPL 456
            +HV + P         L K   G S  K  IR ++DT+ +LSELL+   SN L  L
Sbjct: 646 VEHVLSSPPSADSASIKLTKACGGVSTQKTYIRTVIDTMQNLSELLIFHLSNDLCDL 698

[Close]

BLAST of MELO3C024863 vs. TrEMBL
Match: B9I286_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s00720g PE=4 SV=2)

HSP 1 Score: 89.4 bits (220), Expect = 1.3e-14
Identity = 99/351 (28.21%), Postives = 157/351 (44.73%), Query Frame = 1


Query: 121 SNGDHFFEGKQGDDHLRNLKKSFPVNSDSQEFFGTENHGTCIYKHDPIIHVLQNNVHYAE 180
           S G   ++  Q + HL+        N DS     ++NH             L +N + + 
Sbjct: 370 SKGKVCYDSSQVNFHLKQ-------NDDSFAEVPSKNH-----------EELLSNKNISI 429

Query: 181 DSLDHTLKVEMGIYVPDASPQFC-LDLKTIETATTTESSSESFDQINLAAVDSPCWKGAP 240
           D LD   + +M   VP  +  F  L +   E A + E +SES D     AVDSPCWKGAP
Sbjct: 430 DFLDKLFREKMENRVPCKNLDFFNLAMDGHEAAGSVEITSESLDHY-FPAVDSPCWKGAP 489

Query: 241 ISGVSPFQAFEISTPSDVKTVEVNNDVKLSFSQVPPS-AGDSMEISVHEPNERTI---GS 300
           +S  S F+  E+  P +   VE  N + L   Q+ PS   D+++    + +  ++     
Sbjct: 490 VSLPSAFEGSEVVNPQN--KVEACNGLNLQGPQISPSTTNDAVKDCPEKQSNISMTFNNE 549

Query: 301 ILEKGATSSAKMPSIADSSLLATQKTRDYMKAGEFYSEMGCFHPTTGCIHEPVEDGGDFY 360
            LE    SS K P +A  ++L  +   D +K G       C   ++ C    + D  D  
Sbjct: 550 SLEHRPASSFKRPLVA--NVLFREGIDDAVKYGP------CQRKSSYCNEAQISDVIDEP 609

Query: 361 SSSTPQSKYKNNLLSGKNITPTSY-TKKHED-AGLNS--DDSPANGLNHLSCDVAKHV-- 420
              +    +K      K++    + +KK+ D AG+    +D+P +  +H+     +HV  
Sbjct: 610 RKESILPDFKPVHTKQKSLEEGEWPSKKNSDVAGVRRKINDNPDDCSSHVPYHAIEHVLC 669

Query: 421 -----QNLPFNLVKVFLGESNSKIDIRILVDTLHSLSELLLVCHSNGLAPL 456
                ++ P    +  +GES+SK+  R LVDT+H+LSELLL   SN    L
Sbjct: 670 SPPSSEHAPAQHTQSQVGESSSKMHARTLVDTMHNLSELLLFYSSNDTCEL 691

[Close]

BLAST of MELO3C024863 vs. TrEMBL
Match: E0CVD9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0098g00810 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 1.2e-12
Identity = 87/352 (24.72%), Postives = 161/352 (45.74%), Query Frame = 1


Query: 135 HLRNLKKS-FPVNSDSQEFFGTENHGTCIYKHDPII---------HVLQNNVHYAEDSLD 194
           HL N+++   PV S+ +E +   +     ++ +  +         H L NN    +++ D
Sbjct: 408 HLSNMEEPHIPVISEGRELYSDTSQLNGHWQRNDHLSMESSSTKKHELLNNEMGVKET-D 467

Query: 195 HTLKVEMGIYVPDASPQ--FCLDLKTIETATTTESSSESFDQINLAAVDSPCWKGAPISG 254
           + L+    + +P  + +  F     +IE   + +++SE+ D  N  AVDSPCWKG+  S 
Sbjct: 468 NLLRARSELQIPHLNVEDGFSFSPNSIEAVNSIDNTSETLDHYN-PAVDSPCWKGSITSH 527

Query: 255 VSPFQAFEISTPSD-VKTVEVNNDVKLSFSQV-PPSAGDSMEISVHEPNERT---IGSIL 314
            SPF+  E  +P + ++ +E  +   L    + P ++ D++ +S  +PNE T        
Sbjct: 528 FSPFEVSEALSPHNLMEQLEALDGFNLQGHHIFPLNSDDAVNVSSLKPNENTEYHKNVCG 587

Query: 315 EKGATSSAKMPSIADSSLLATQKTRDYMKAGEFYSEM--GCFHPTTGCIHEPVEDGGDFY 374
           E G   S K PS+ +      Q++ D  K G +  ++  G  + ++  I +P  D     
Sbjct: 588 ENGLLPSWKRPSVVNHP-SREQRSLDAFKTGPYCQKLSSGDGNQSSNDIIQPKRDHSLLN 647

Query: 375 SSSTPQSKYKNNL-LSGKNITPTSYTKKHEDAGL-----NSDDSPANGLNHLSCDVAKHV 434
           SS +   +  + +  S + +  TS  K     G+     N +D   +G +H +  + +++
Sbjct: 648 SSKSDNLELSHTMRQSFEEVKFTSERKLSSGVGVEVTGNNINDVSRDGSSHETYHLTENI 707

Query: 435 QNLPFN-------LVKVFLGESNSKIDIRILVDTLHSLSELLLV-CHSNGLA 454
              P +       L K    ES  KID+ +L++T+  LS LLL  C  N  +
Sbjct: 708 SCSPLSGDDASTKLTKQPASESTPKIDVHMLINTVQDLSVLLLSHCSDNAFS 756

[Close]

BLAST of MELO3C024863 vs. TrEMBL
Match: E0CVD9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0098g00810 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 7.0e-05
Identity = 28/87 (32.18%), Postives = 45/87 (51.72%), Query Frame = 1


Query: 8   HGPLLGSLTMSSTNPYLFGNASNGLTTSIGQEKPYHPSYASTSCNKGGPMVIIDQPTYDY 67
           H P L  +  + T+ + FG  S+ + TS+ + KPY+P Y + +     P+V++++P YD 
Sbjct: 119 HLPPLSPIVSAGTDVFSFGQCSDRMKTSLVEAKPYYPPYVAPAIEDNSPLVVLNEPNYDL 178

Query: 68  PSNSHVVAFNVPPYADFSHGSSPSGFE 95
            S SH    N     D  +  S SG E
Sbjct: 179 LSTSHAAHLNGSSSLD-DYTQSMSGLE 204

HSP 2 Score: 80.1 bits (196), Expect = 7.7e-12
Identity = 85/292 (29.11%), Postives = 130/292 (44.52%), Query Frame = 1


Query: 180 EDSLDHTLKVEMGIYVPDASPQ-FCLDLKTIETATTTESSSESFDQINLAAVDSPCWKGA 239
           +D+ D   K + G+         F +  KT ET  +  SSS++ D  N   VDSPCWKG 
Sbjct: 438 KDAWDKVFKAKPGLQNSHVGLDGFKMAFKTNETINSFLSSSDNVDPNN-PGVDSPCWKGV 497

Query: 240 PISGVSPFQAFEISTPSDVKTVEVNNDVKLSFSQVPPSAGDSMEISVHEPNERTIG---- 299
           P S  SPF A E   P  +K +E  + + +     P SAG++  +S  +P +  +     
Sbjct: 498 PGSCFSPFGASEDGVPEQIKKLEDCSGLNIHMPMFPLSAGEN--VSSQKPIKNAVEYNEF 557

Query: 300 SILEKGATSSAKMPSIADSSLLATQKTRDYMKA---GEFYSEMGCFHPTTGCIHEPVEDG 359
             LE G     K  S+A+S+     K  + +K     E   + G      G +H+    G
Sbjct: 558 GWLENGLRPPLKRYSVANSAF-GEHKWDNSVKTTYDAETSHDRGPQSYRDG-LHQ---SG 617

Query: 360 GDFYSSSTPQSKYKNNLLSGKNITPTSYTKKHE---DAGLNSDDSPANGLNHLSCDVAKH 419
               S       +      G++   T   +      D  LN++D+   G +H+   V ++
Sbjct: 618 NGDKSLGLLDDSHAMQQGHGEDGLATEVKQTWSCVADVKLNANDTMEYGSSHVPSHVVEN 677

Query: 420 V-----QNLPFNLVKVFLGESNSKIDIRILVDTLHSLSELLLVCHSNGLAPL 456
           V     ++    L K    ES  K+D+++LVDTL +LSELLL   SNGL  L
Sbjct: 678 VLCSSAEDAATKLSKSNGEESMLKVDVQMLVDTLKNLSELLLTNCSNGLCQL 721

[Close]

BLAST of MELO3C024863 vs. NCBI nr
Match: gi|778691700|ref|XP_011653329.1| (PREDICTED: uncharacterized protein LOC101203864 isoform X1 [Cucumis sativus])

HSP 1 Score: 592.0 bits (1525), Expect = 8.6e-166
Identity = 301/337 (89.32%), Postives = 308/337 (91.39%), Query Frame = 1


Query: 122 NGDHFFEGKQGDDHLRNLKKSFPVNSDSQEFFGTENHGTCIYKHDPIIHVLQNNVHYAED 181
           NGDHFFEGKQG DHLRNLKKSFPVNSDSQEFF TENHGTCI KHDPIIHVLQNNVHYAE 
Sbjct: 328 NGDHFFEGKQGGDHLRNLKKSFPVNSDSQEFFSTENHGTCIDKHDPIIHVLQNNVHYAEG 387

Query: 182 SLDHTLKVEMGIYVPDASPQFCLDLKTIETATTTESSSESFDQINLAAVDSPCWKGAPIS 241
           S DHTLKV MG++VPDASPQF LDLKTIETATT ESSSESFDQ NLAAVDSPCWKGAPIS
Sbjct: 388 SPDHTLKVGMGLHVPDASPQFSLDLKTIETATT-ESSSESFDQYNLAAVDSPCWKGAPIS 447

Query: 242 GVSPFQAFEISTPSDVKTVEVNNDVKLSFSQVPPS-AGDSMEISVHEPNERTIGSILEKG 301
           GVSPFQAFEIST S VKTVEVNNDVKLS SQVPPS A DSME+SVHEPNE TIG  +EKG
Sbjct: 448 GVSPFQAFEISTSSHVKTVEVNNDVKLSLSQVPPSSAEDSMEVSVHEPNESTIGRFMEKG 507

Query: 302 ATSSAKMPSIADSSLLATQKTRDYMKAGEFYSEMGCFHPTTGCIHEPVEDGGDFYSS-ST 361
           ATSSAK+PSIADSSLLATQKTRD MKAGEFYSEMG FHPTTGCIHEPVEDGGD YSS S+
Sbjct: 508 ATSSAKLPSIADSSLLATQKTRDSMKAGEFYSEMGWFHPTTGCIHEPVEDGGDLYSSISS 567

Query: 362 PQSKYKNNLLSGKNITPTSYTKKHEDAGLNSDDSPANGLNHLSCDVAKHVQNLPFNLVKV 421
           PQSKYKNNLLSGK I PTSYTKKH DA LNSD+S  NGLNHLSCDVAKHVQNLPF LVKV
Sbjct: 568 PQSKYKNNLLSGKKIAPTSYTKKHADARLNSDNSSENGLNHLSCDVAKHVQNLPFELVKV 627

Query: 422 FLGESNSKIDIRILVDTLHSLSELLLVCHSNGLAPLH 457
           FLGESNSKIDIRILVDTLHSLSELLLVCHSNGLA LH
Sbjct: 628 FLGESNSKIDIRILVDTLHSLSELLLVCHSNGLAALH 663

[Close]

BLAST of MELO3C024863 vs. NCBI nr
Match: gi|778691700|ref|XP_011653329.1| (PREDICTED: uncharacterized protein LOC101203864 isoform X1 [Cucumis sativus])

HSP 1 Score: 235.7 bits (600), Expect = 1.6e-58
Identity = 108/121 (89.26%), Postives = 114/121 (94.21%), Query Frame = 1


Query: 1   MMEPSDNHGPLLGSLTMSSTNPYLFGNASNGLTTSIGQEKPYHPSYASTSCNKGGPMVII 60
           MMEP DNHGPLLGS++MSST+P LFGN S+GLTT IGQEKPY+PSYASTSCNKGGPMVI+
Sbjct: 101 MMEPPDNHGPLLGSISMSSTDPSLFGNTSDGLTTGIGQEKPYYPSYASTSCNKGGPMVIV 160

Query: 61  DQPTYDYPSNSHVVAFNVPPYADFSHGSSPSGFERSVEEAAHSIHMFDLNKCYDFVRECP 120
           DQPTYDYPSNSHVVAFN PPY DFSHGSSPSGFERSVEEAAHSIHMFDLNKC DFVRECP
Sbjct: 161 DQPTYDYPSNSHVVAFNAPPYTDFSHGSSPSGFERSVEEAAHSIHMFDLNKCNDFVRECP 220

Query: 121 S 122
           S
Sbjct: 221 S 221

HSP 2 Score: 592.0 bits (1525), Expect = 8.6e-166
Identity = 301/337 (89.32%), Postives = 308/337 (91.39%), Query Frame = 1


Query: 122 NGDHFFEGKQGDDHLRNLKKSFPVNSDSQEFFGTENHGTCIYKHDPIIHVLQNNVHYAED 181
           NGDHFFEGKQG DHLRNLKKSFPVNSDSQEFF TENHGTCI KHDPIIHVLQNNVHYAE 
Sbjct: 328 NGDHFFEGKQGGDHLRNLKKSFPVNSDSQEFFSTENHGTCIDKHDPIIHVLQNNVHYAEG 387

Query: 182 SLDHTLKVEMGIYVPDASPQFCLDLKTIETATTTESSSESFDQINLAAVDSPCWKGAPIS 241
           S DHTLKV MG++VPDASPQF LDLKTIETATT ESSSESFDQ NLAAVDSPCWKGAPIS
Sbjct: 388 SPDHTLKVGMGLHVPDASPQFSLDLKTIETATT-ESSSESFDQYNLAAVDSPCWKGAPIS 447

Query: 242 GVSPFQAFEISTPSDVKTVEVNNDVKLSFSQVPPS-AGDSMEISVHEPNERTIGSILEKG 301
           GVSPFQAFEIST S VKTVEVNNDVKLS SQVPPS A DSME+SVHEPNE TIG  +EKG
Sbjct: 448 GVSPFQAFEISTSSHVKTVEVNNDVKLSLSQVPPSSAEDSMEVSVHEPNESTIGRFMEKG 507

Query: 302 ATSSAKMPSIADSSLLATQKTRDYMKAGEFYSEMGCFHPTTGCIHEPVEDGGDFYSS-ST 361
           ATSSAK+PSIADSSLLATQKTRD MKAGEFYSEMG FHPTTGCIHEPVEDGGD YSS S+
Sbjct: 508 ATSSAKLPSIADSSLLATQKTRDSMKAGEFYSEMGWFHPTTGCIHEPVEDGGDLYSSISS 567

Query: 362 PQSKYKNNLLSGKNITPTSYTKKHEDAGLNSDDSPANGLNHLSCDVAKHVQNLPFNLVKV 421
           PQSKYKNNLLSGK I PTSYTKKH DA LNSD+S  NGLNHLSCDVAKHVQNLPF LVKV
Sbjct: 568 PQSKYKNNLLSGKKIAPTSYTKKHADARLNSDNSSENGLNHLSCDVAKHVQNLPFELVKV 627

Query: 422 FLGESNSKIDIRILVDTLHSLSELLLVCHSNGLAPLH 457
           FLGESNSKIDIRILVDTLHSLSELLLVCHSNGLA LH
Sbjct: 628 FLGESNSKIDIRILVDTLHSLSELLLVCHSNGLAALH 663

[Close]

BLAST of MELO3C024863 vs. NCBI nr
Match: gi|778691706|ref|XP_011653332.1| (PREDICTED: uncharacterized protein LOC101203864 isoform X2 [Cucumis sativus])

HSP 1 Score: 235.7 bits (600), Expect = 1.6e-58
Identity = 108/121 (89.26%), Postives = 114/121 (94.21%), Query Frame = 1


Query: 1   MMEPSDNHGPLLGSLTMSSTNPYLFGNASNGLTTSIGQEKPYHPSYASTSCNKGGPMVII 60
           MMEP DNHGPLLGS++MSST+P LFGN S+GLTT IGQEKPY+PSYASTSCNKGGPMVI+
Sbjct: 101 MMEPPDNHGPLLGSISMSSTDPSLFGNTSDGLTTGIGQEKPYYPSYASTSCNKGGPMVIV 160

Query: 61  DQPTYDYPSNSHVVAFNVPPYADFSHGSSPSGFERSVEEAAHSIHMFDLNKCYDFVRECP 120
           DQPTYDYPSNSHVVAFN PPY DFSHGSSPSGFERSVEEAAHSIHMFDLNKC DFVRECP
Sbjct: 161 DQPTYDYPSNSHVVAFNAPPYTDFSHGSSPSGFERSVEEAAHSIHMFDLNKCNDFVRECP 220

Query: 121 S 122
           S
Sbjct: 221 S 221

HSP 2 Score: 90.5 bits (223), Expect = 8.2e-15
Identity = 84/297 (28.28%), Postives = 134/297 (45.12%), Query Frame = 1


Query: 172 LQNNVHYAEDSLDHTLKVEMGIYVPDASPQFCLDLKTIETATTTESSSESFDQINLAAVD 231
           L +N + + D   H    +  I VP  S      +   E     ++ +ES D  N  AVD
Sbjct: 377 LSSNQNASMDVSGHFAGEKPVIQVPCTSLGGISLVDKNEAIDPAKNHTESLDHYN-PAVD 436

Query: 232 SPCWKGAPISGVSPFQAFEISTPSDVKTVEV-NNDVKLSFSQVPPSAGDSMEISVHEPNE 291
           SPCWKGAP+S  S  +  E  TP ++K +E  +      +     S+ D++++S  + +E
Sbjct: 437 SPCWKGAPVSNFSQLEVSEAVTPQNMKNLEACSGSNHQGYQTFSVSSDDAVKVSPEKTSE 496

Query: 292 RTI---GSILEKGATSSAKMPSIADSSLLATQKTRDYMKAGEFYSEMGCFHPTTGCIHEP 351
           ++I   G  LE  + SS K P +AD ++L  +    ++  G   ++   FH         
Sbjct: 497 KSIQQKGWSLENYSASSMKRP-LAD-NMLHREGIDHFVNFGANCTKPSLFHQVQISDDAL 556

Query: 352 VEDGGDFYSSSTPQSKYKNNLLSGKNITPTSYTK--KHEDAGLNSDDSPANGLNHLSCDV 411
                D  +   PQ++ K +  SGK  T ++        D G+N +D P    +H+    
Sbjct: 557 PNKSFDDSNGKLPQNE-KQSCESGKWTTESNSAPVISVADVGMNMNDDPDECSSHVPFHA 616

Query: 412 AKHVQNLP-------FNLVKVFLGESNSKIDIRILVDTLHSLSELLLVCHSNGLAPL 456
            +HV + P         L K   G S  K  IR ++DT+ +LSELL+   SN L  L
Sbjct: 617 VEHVLSSPPSADSASIKLTKACGGVSTQKTYIRTVIDTMQNLSELLIFHLSNDLCDL 669

[Close]

BLAST of MELO3C024863 vs. NCBI nr
Match: gi|223539484|gb|EEF41073.1| (hypothetical protein RCOM_0756330 [Ricinus communis])

HSP 1 Score: 90.5 bits (223), Expect = 8.2e-15
Identity = 84/297 (28.28%), Postives = 134/297 (45.12%), Query Frame = 1


Query: 172 LQNNVHYAEDSLDHTLKVEMGIYVPDASPQFCLDLKTIETATTTESSSESFDQINLAAVD 231
           L +N + + D   H    +  I VP  S      +   E     ++ +ES D  N  AVD
Sbjct: 406 LSSNQNASMDVSGHFAGEKPVIQVPCTSLGGISLVDKNEAIDPAKNHTESLDHYN-PAVD 465

Query: 232 SPCWKGAPISGVSPFQAFEISTPSDVKTVEV-NNDVKLSFSQVPPSAGDSMEISVHEPNE 291
           SPCWKGAP+S  S  +  E  TP ++K +E  +      +     S+ D++++S  + +E
Sbjct: 466 SPCWKGAPVSNFSQLEVSEAVTPQNMKNLEACSGSNHQGYQTFSVSSDDAVKVSPEKTSE 525

Query: 292 RTI---GSILEKGATSSAKMPSIADSSLLATQKTRDYMKAGEFYSEMGCFHPTTGCIHEP 351
           ++I   G  LE  + SS K P +AD ++L  +    ++  G   ++   FH         
Sbjct: 526 KSIQQKGWSLENYSASSMKRP-LAD-NMLHREGIDHFVNFGANCTKPSLFHQVQISDDAL 585

Query: 352 VEDGGDFYSSSTPQSKYKNNLLSGKNITPTSYTK--KHEDAGLNSDDSPANGLNHLSCDV 411
                D  +   PQ++ K +  SGK  T ++        D G+N +D P    +H+    
Sbjct: 586 PNKSFDDSNGKLPQNE-KQSCESGKWTTESNSAPVISVADVGMNMNDDPDECSSHVPFHA 645

Query: 412 AKHVQNLP-------FNLVKVFLGESNSKIDIRILVDTLHSLSELLLVCHSNGLAPL 456
            +HV + P         L K   G S  K  IR ++DT+ +LSELL+   SN L  L
Sbjct: 646 VEHVLSSPPSADSASIKLTKACGGVSTQKTYIRTVIDTMQNLSELLIFHLSNDLCDL 698

[Close]

BLAST of MELO3C024863 vs. NCBI nr
Match: gi|1000960986|ref|XP_015576084.1| (PREDICTED: uncharacterized protein LOC8283697 isoform X1 [Ricinus communis])

HSP 1 Score: 90.5 bits (223), Expect = 8.2e-15
Identity = 84/297 (28.28%), Postives = 134/297 (45.12%), Query Frame = 1


Query: 172 LQNNVHYAEDSLDHTLKVEMGIYVPDASPQFCLDLKTIETATTTESSSESFDQINLAAVD 231
           L +N + + D   H    +  I VP  S      +   E     ++ +ES D  N  AVD
Sbjct: 379 LSSNQNASMDVSGHFAGEKPVIQVPCTSLGGISLVDKNEAIDPAKNHTESLDHYN-PAVD 438

Query: 232 SPCWKGAPISGVSPFQAFEISTPSDVKTVEV-NNDVKLSFSQVPPSAGDSMEISVHEPNE 291
           SPCWKGAP+S  S  +  E  TP ++K +E  +      +     S+ D++++S  + +E
Sbjct: 439 SPCWKGAPVSNFSQLEVSEAVTPQNMKNLEACSGSNHQGYQTFSVSSDDAVKVSPEKTSE 498

Query: 292 RTI---GSILEKGATSSAKMPSIADSSLLATQKTRDYMKAGEFYSEMGCFHPTTGCIHEP 351
           ++I   G  LE  + SS K P +AD ++L  +    ++  G   ++   FH         
Sbjct: 499 KSIQQKGWSLENYSASSMKRP-LAD-NMLHREGIDHFVNFGANCTKPSLFHQVQISDDAL 558

Query: 352 VEDGGDFYSSSTPQSKYKNNLLSGKNITPTSYTK--KHEDAGLNSDDSPANGLNHLSCDV 411
                D  +   PQ++ K +  SGK  T ++        D G+N +D P    +H+    
Sbjct: 559 PNKSFDDSNGKLPQNE-KQSCESGKWTTESNSAPVISVADVGMNMNDDPDECSSHVPFHA 618

Query: 412 AKHVQNLP-------FNLVKVFLGESNSKIDIRILVDTLHSLSELLLVCHSNGLAPL 456
            +HV + P         L K   G S  K  IR ++DT+ +LSELL+   SN L  L
Sbjct: 619 VEHVLSSPPSADSASIKLTKACGGVSTQKTYIRTVIDTMQNLSELLIFHLSNDLCDL 671

The following BLAST results are available for this feature:

BLAST of MELO3C024863 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZ16_CUCSA	6.0e-166	89.32	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G091890 PE=4 SV=1	[more]
A0A0A0KZ16_CUCSA	1.1e-58	89.26	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G091890 PE=4 SV=1	[more]
B9I286_POPTR	1.3e-14	28.21	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s00720g PE=4 SV=2	[more]
E0CVD9_VITVI	1.2e-12	24.72	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0098g00810 PE=4 SV=...	[more]
E0CVD9_VITVI	7.0e-05	32.18	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0098g00810 PE=4 SV=...	[more]

BLAST of MELO3C024863 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778691700\|ref\|XP_011653329.1\|	8.6e-166	89.32	PREDICTED: uncharacterized protein LOC101203864 isoform X1 [Cucumis sativus]	[more]
gi\|778691700\|ref\|XP_011653329.1\|	1.6e-58	89.26	PREDICTED: uncharacterized protein LOC101203864 isoform X1 [Cucumis sativus]	[more]
gi\|778691706\|ref\|XP_011653332.1\|	1.6e-58	89.26	PREDICTED: uncharacterized protein LOC101203864 isoform X2 [Cucumis sativus]	[more]
gi\|223539484\|gb\|EEF41073.1\|	8.2e-15	28.28	hypothetical protein RCOM_0756330 [Ricinus communis]	[more]
gi\|1000960986\|ref\|XP_015576084.1\|	8.2e-15	28.28	PREDICTED: uncharacterized protein LOC8283697 isoform X1 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU49211	melon EST collection version 4.0	transcribed_cluster
MU59464	melon EST collection version 4.0	transcribed_cluster
MU62746	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C024863T1	MELO3C024863T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU62746	MU62746	transcribed_cluster
MU49211	MU49211	transcribed_cluster
MU59464	MU59464	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34361	FAMILY NOT NAMED	coord: 181..445 score: 3.8
None	No IPR available	PANTHER	PTHR34361:SF2	SUBFAMILY NOT NAMED	coord: 181..445 score: 3.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C024863	Csa4G091890	Cucumber (Chinese Long) v2	cumeB318
MELO3C024863	CSPI04G08360	Wild cucumber (PI 183967)	cpimeB318
MELO3C024863	Cucsa.273290	Cucumber (Gy14) v1	cgymeB456
MELO3C024863	Lsi07G003230	Bottle gourd (USVL1VR-Ls)	lsimeB458
MELO3C024863	CsGy4G008250	Cucumber (Gy14) v2	cgybmeB276
MELO3C024863	CsaV3_4G008600	Cucumber (Chinese Long) v3	cucmeB323

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C024863	Watermelon (Charleston Gray)	mewcgB492
MELO3C024863	Watermelon (97103) v1	mewmB513
MELO3C024863	Watermelon (97103) v2	mewmbB497
MELO3C024863	Wax gourd	mewgoB576