MELO3C024801.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C024801.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionACT11D09.5
Locationchr11 : 8819883 .. 8820089 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCAGATAGCTGTGAGCTGGAGGACGCGATGGCGGCGCAGGTGATTGAGCTTATGGAGGCCATCTCGAACCTTACTATGGCGGAGAAGAGTAAGGGCATCATGATAGTGAATCAGAAGGTGTCACTCATGAGAAGCTTCATCAAGATGTTCGATTTGATGAAGGTCGCTTACTATAGGGTCATCCTTGGCAGTGACTGGTGA

mRNA sequence

ATGGCTGCAGATAGCTGTGAGCTGGAGGACGCGATGGCGGCGCAGGTGATTGAGCTTATGGAGGCCATCTCGAACCTTACTATGGCGGAGAAGAGTAAGGGCATCATGATAGTGAATCAGAAGGTGTCACTCATGAGAAGCTTCATCAAGATGTTCGATTTGATGAAGGTCGCTTACTATAGGGTCATCCTTGGCAGTGACTGGTGA

Coding sequence (CDS)

ATGGCTGCAGATAGCTGTGAGCTGGAGGACGCGATGGCGGCGCAGGTGATTGAGCTTATGGAGGCCATCTCGAACCTTACTATGGCGGAGAAGAGTAAGGGCATCATGATAGTGAATCAGAAGGTGTCACTCATGAGAAGCTTCATCAAGATGTTCGATTTGATGAAGGTCGCTTACTATAGGGTCATCCTTGGCAGTGACTGGTGA

Protein sequence

MAADSCELEDAMAAQVIELMEAISNLTMAEKSKGIMIVNQKVSLMRSFIKMFDLMKVAYYRVILGSDW
Homology
[Close]
BLAST of MELO3C024801.2 vs. NCBI nr
Match: AAS80151.1 (ACT11D09.5 [Cucumis melo])

HSP 1 Score: 57.0 bits (136), Expect = 2.9e-05
Identity = 32/49 (65.31%), Postives = 40/49 (81.63%), Query Frame = 0 

Query: 12 MAAQVIELMEAISNLTMAEKSKGIMIVNQKVSLMRSFIKMFDLMKVAYY 61
          MA ++IE ME+IS+LT+ E SK IMIV +KVSLMR+FIKM D MK AY+
Sbjct: 1  MAMRMIEHMESISSLTITESSKCIMIVTEKVSLMRNFIKMSDPMKAAYW 49

[Close]
BLAST of MELO3C024801.2 vs. TrEMBL
Match: tr|Q6E437|Q6E437_CUCME (ACT11D09.5 OS=Cucumis melo OX=3656 GN=ACT11D0.5 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.9e-05
Identity = 32/49 (65.31%), Postives = 40/49 (81.63%), Query Frame = 0 

Query: 12 MAAQVIELMEAISNLTMAEKSKGIMIVNQKVSLMRSFIKMFDLMKVAYY 61
          MA ++IE ME+IS+LT+ E SK IMIV +KVSLMR+FIKM D MK AY+
Sbjct: 1  MAMRMIEHMESISSLTITESSKCIMIVTEKVSLMRNFIKMSDPMKAAYW 49

The following BLAST results are available for this feature:
BLAST of MELO3C024801.2 vs. NCBI nr
Match NameE-valueIdentityDescription
AAS80151.12.9e-0565.31ACT11D09.5 [Cucumis melo][more]
BLAST of MELO3C024801.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C024801.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C024801.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|Q6E437|Q6E437_CUCME1.9e-0565.31ACT11D09.5 OS=Cucumis melo OX=3656 GN=ACT11D0.5 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C024801.2.1MELO3C024801.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C024801.2Silver-seed gourdcarmedB0420
MELO3C024801.2Cucumber (Chinese Long) v3cucmedB096
MELO3C024801.2Watermelon (97103) v2medwmbB087
MELO3C024801.2Wax gourdmedwgoB125
MELO3C024801.2Wax gourdmedwgoB128
MELO3C024801.2Cucumber (Gy14) v2cgybmedB080
MELO3C024801.2Cucumber (Gy14) v1cgymedB071
MELO3C024801.2Cucurbita maxima (Rimu)cmamedB573
MELO3C024801.2Cucurbita maxima (Rimu)cmamedB616
MELO3C024801.2Cucurbita moschata (Rifu)cmomedB561
MELO3C024801.2Cucurbita moschata (Rifu)cmomedB605
MELO3C024801.2Cucurbita pepo (Zucchini)cpemedB306
MELO3C024801.2Cucurbita pepo (Zucchini)cpemedB807
MELO3C024801.2Wild cucumber (PI 183967)cpimedB088
MELO3C024801.2Cucumber (Chinese Long) v2cumedB088
MELO3C024801.2Bottle gourd (USVL1VR-Ls)lsimedB054
MELO3C024801.2Watermelon (Charleston Gray)medwcgB088
MELO3C024801.2Watermelon (97103) v1medwmB120