MELO3C024801 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C024801
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionNADH-quinone oxidoreductase subunit C
Locationchr11 : 8677501 .. 8677707 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCAGATAGCTGTGAGCTGGAGGACGCGATGGCGGCGCAGGTGATTGAGCTTATGGAGGCCATCTCGAACCTTACTATGGCGGAGAAGAGTAAGGGCATCATGATAGTGAATCAGAAGGTGTCACTCATGAGAAGCTTCATCAAGATGTTCGATTTGATGAAGGTCGCTTACTATAGGGTCATCCTTGGCAGTGACTGGTGA

mRNA sequence

ATGGCTGCAGATAGCTGTGAGCTGGAGGACGCGATGGCGGCGCAGGTGATTGAGCTTATGGAGGCCATCTCGAACCTTACTATGGCGGAGAAGAGTAAGGGCATCATGATAGTGAATCAGAAGGTGTCACTCATGAGAAGCTTCATCAAGATGTTCGATTTGATGAAGGTCGCTTACTATAGGGTCATCCTTGGCAGTGACTGGTGA

Coding sequence (CDS)

ATGGCTGCAGATAGCTGTGAGCTGGAGGACGCGATGGCGGCGCAGGTGATTGAGCTTATGGAGGCCATCTCGAACCTTACTATGGCGGAGAAGAGTAAGGGCATCATGATAGTGAATCAGAAGGTGTCACTCATGAGAAGCTTCATCAAGATGTTCGATTTGATGAAGGTCGCTTACTATAGGGTCATCCTTGGCAGTGACTGGTGA

Protein sequence

MAADSCELEDAMAAQVIELMEAISNLTMAEKSKGIMIVNQKVSLMRSFIKMFDLMKVAYYRVILGSDW*
Homology
[Close]
BLAST of MELO3C024801 vs. TrEMBL
Match: Q6E437_CUCME (ACT11D09.5 OS=Cucumis melo GN=ACT11D0.5 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 4.3e-07
Identity = 32/49 (65.31%), Postives = 40/49 (81.63%), Query Frame = 1 

Query: 12 MAAQVIELMEAISNLTMAEKSKGIMIVNQKVSLMRSFIKMFDLMKVAYY 61
          MA ++IE ME+IS+LT+ E SK IMIV +KVSLMR+FIKM D MK AY+
Sbjct: 1  MAMRMIEHMESISSLTITESSKCIMIVTEKVSLMRNFIKMSDPMKAAYW 49

[Close]
BLAST of MELO3C024801 vs. NCBI nr
Match: gi|46095228|gb|AAS80151.1| (ACT11D09.5 [Cucumis melo])

HSP 1 Score: 61.6 bits (148), Expect = 6.1e-07
Identity = 32/49 (65.31%), Postives = 40/49 (81.63%), Query Frame = 1 

Query: 12 MAAQVIELMEAISNLTMAEKSKGIMIVNQKVSLMRSFIKMFDLMKVAYY 61
          MA ++IE ME+IS+LT+ E SK IMIV +KVSLMR+FIKM D MK AY+
Sbjct: 1  MAMRMIEHMESISSLTITESSKCIMIVTEKVSLMRNFIKMSDPMKAAYW 49

The following BLAST results are available for this feature:
BLAST of MELO3C024801 vs. TrEMBL
Match NameE-valueIdentityDescription
Q6E437_CUCME4.3e-0765.31ACT11D09.5 OS=Cucumis melo GN=ACT11D0.5 PE=4 SV=1[more]
BLAST of MELO3C024801 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|46095228|gb|AAS80151.1|6.1e-0765.31ACT11D09.5 [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C024801T1MELO3C024801T1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C024801Cucurbita moschata (Rifu)cmomeB483
MELO3C024801Cucurbita moschata (Rifu)cmomeB524
MELO3C024801Wild cucumber (PI 183967)cpimeB096
MELO3C024801Cucumber (Chinese Long) v2cumeB087
MELO3C024801Watermelon (Charleston Gray)mewcgB090
MELO3C024801Watermelon (97103) v1mewmB125
MELO3C024801Cucurbita pepo (Zucchini)cpemeB260
MELO3C024801Cucurbita pepo (Zucchini)cpemeB672
MELO3C024801Bottle gourd (USVL1VR-Ls)lsimeB053
MELO3C024801Cucumber (Gy14) v2cgybmeB083
MELO3C024801Silver-seed gourdcarmeB0416
MELO3C024801Silver-seed gourdcarmeB0935
MELO3C024801Cucumber (Chinese Long) v3cucmeB103
MELO3C024801Cucumber (Chinese Long) v3cucmeB443
MELO3C024801Watermelon (97103) v2mewmbB092
MELO3C024801Wax gourdmewgoB123
MELO3C024801Wax gourdmewgoB126
MELO3C024801Cucumber (Gy14) v1cgymeB072
MELO3C024801Cucurbita maxima (Rimu)cmameB493
MELO3C024801Cucurbita maxima (Rimu)cmameB534