MELO3C024740 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C024740
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Retrotransposon protein, putative, Ty3-gypsy subclass
Location	chr11 : 7452544 .. 7452861 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACCTAAAGAGCTGAAAGAATTGAAGACACAGTTACAAGAGTTGGTAGACAAGGGTTATATCCGACTGAGTGTATCACCATGGGGTGCACCAGTGCTGTTTGTGAAAAAGAAGGATGGCACCTTGAGATTGTGTATTAATTACAGACAGTTGAACAAGGTGCCTATAAGCAATAAATATTCATTGCCTCGAATAGATGATTTATTCGATCAGCTTAAAGGTACCTCAGTGTTTTCAAAAGTTGATCTACGTTCAGGATATCATCAACTTAAGATAAAGGAAGCAGATGTTCCAAAAACAACATTCAGAACATGA

mRNA sequence

ATGGCACCTAAAGAGCTGAAAGAATTGAAGACACAGTTACAAGAGTTGGTAGACAAGGGTTATATCCGACTGAGTGTATCACCATGGGGTGCACCAGTGCTGTTTGTGAAAAAGAAGGATGGCACCTTGAGATTGTGTATTAATTACAGACAGTTGAACAAGGTGCCTATAAGCAATAAATATTCATTGCCTCGAATAGATGATTTATTCGATCAGCTTAAAGGTACCTCAGTGTTTTCAAAAGTTGATCTACGTTCAGGATATCATCAACTTAAGATAAAGGAAGCAGATGTTCCAAAAACAACATTCAGAACATGA

Coding sequence (CDS)

ATGGCACCTAAAGAGCTGAAAGAATTGAAGACACAGTTACAAGAGTTGGTAGACAAGGGTTATATCCGACTGAGTGTATCACCATGGGGTGCACCAGTGCTGTTTGTGAAAAAGAAGGATGGCACCTTGAGATTGTGTATTAATTACAGACAGTTGAACAAGGTGCCTATAAGCAATAAATATTCATTGCCTCGAATAGATGATTTATTCGATCAGCTTAAAGGTACCTCAGTGTTTTCAAAAGTTGATCTACGTTCAGGATATCATCAACTTAAGATAAAGGAAGCAGATGTTCCAAAAACAACATTCAGAACATGA

Protein sequence

MAPKELKELKTQLQELVDKGYIRLSVSPWGAPVLFVKKKDGTLRLCINYRQLNKVPISNKYSLPRIDDLFDQLKGTSVFSKVDLRSGYHQLKIKEADVPKTTFRT*

Homology

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BLAST of MELO3C024740 vs. Swiss-Prot
Match: YG31B_YEAST (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 95.1 bits (235), Expect = 4.8e-19
Identity = 46/102 (45.10%), Postives = 65/102 (63.73%), Query Frame = 1


Query: 4   KELKELKTQLQELVDKGYIRLSVSPWGAPVLFVKKKDGTLRLCINYRQLNKVPISNKYSL 63
           K  +E+   +Q+L+D  +I  S SP  +PV+ V KKDGT RLC++YR LNK  IS+ + L
Sbjct: 607 KNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPL 666

Query: 64  PRIDDLFDQLKGTSVFSKVDLRSGYHQLKIKEADVPKTTFRT 106
           PRID+L  ++    +F+ +DL SGYHQ+ ++  D  KT F T
Sbjct: 667 PRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVT 708

[Close]

BLAST of MELO3C024740 vs. Swiss-Prot
Match: YI31B_YEAST (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-I PE=3 SV=2)

HSP 1 Score: 95.1 bits (235), Expect = 4.8e-19
Identity = 46/102 (45.10%), Postives = 65/102 (63.73%), Query Frame = 1


Query: 4   KELKELKTQLQELVDKGYIRLSVSPWGAPVLFVKKKDGTLRLCINYRQLNKVPISNKYSL 63
           K  +E+   +Q+L+D  +I  S SP  +PV+ V KKDGT RLC++YR LNK  IS+ + L
Sbjct: 633 KNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPL 692

Query: 64  PRIDDLFDQLKGTSVFSKVDLRSGYHQLKIKEADVPKTTFRT 106
           PRID+L  ++    +F+ +DL SGYHQ+ ++  D  KT F T
Sbjct: 693 PRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVT 734

[Close]

BLAST of MELO3C024740 vs. Swiss-Prot
Match: TF23_SCHPO (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 1.9e-15
Identity = 37/104 (35.58%), Postives = 66/104 (63.46%), Query Frame = 1


Query: 1   MAPKELKELKTQLQELVDKGYIRLSVSPWGAPVLFVKKKDGTLRLCINYRQLNKVPISNK 60
           + P +++ +  ++ + +  G IR S +    PV+FV KK+GTLR+ ++Y+ LNK    N 
Sbjct: 420 LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61  YSLPRIDDLFDQLKGTSVFSKVDLRSGYHQLKIKEADVPKTTFR 105
           Y LP I+ L  +++G+++F+K+DL+S YH +++++ D  K  FR
Sbjct: 480 YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFR 523

[Close]

BLAST of MELO3C024740 vs. Swiss-Prot
Match: TF22_SCHPO (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 1.9e-15
Identity = 37/104 (35.58%), Postives = 66/104 (63.46%), Query Frame = 1


Query: 1   MAPKELKELKTQLQELVDKGYIRLSVSPWGAPVLFVKKKDGTLRLCINYRQLNKVPISNK 60
           + P +++ +  ++ + +  G IR S +    PV+FV KK+GTLR+ ++Y+ LNK    N 
Sbjct: 420 LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61  YSLPRIDDLFDQLKGTSVFSKVDLRSGYHQLKIKEADVPKTTFR 105
           Y LP I+ L  +++G+++F+K+DL+S YH +++++ D  K  FR
Sbjct: 480 YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFR 523

[Close]

BLAST of MELO3C024740 vs. Swiss-Prot
Match: TF25_SCHPO (Transposon Tf2-5 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-5 PE=3 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 1.9e-15
Identity = 37/104 (35.58%), Postives = 66/104 (63.46%), Query Frame = 1


Query: 1   MAPKELKELKTQLQELVDKGYIRLSVSPWGAPVLFVKKKDGTLRLCINYRQLNKVPISNK 60
           + P +++ +  ++ + +  G IR S +    PV+FV KK+GTLR+ ++Y+ LNK    N 
Sbjct: 420 LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61  YSLPRIDDLFDQLKGTSVFSKVDLRSGYHQLKIKEADVPKTTFR 105
           Y LP I+ L  +++G+++F+K+DL+S YH +++++ D  K  FR
Sbjct: 480 YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFR 523

[Close]

BLAST of MELO3C024740 vs. TrEMBL
Match: A0A061FQA2_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_043787 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 1.5e-43
Identity = 88/105 (83.81%), Postives = 96/105 (91.43%), Query Frame = 1


Query: 1   MAPKELKELKTQLQELVDKGYIRLSVSPWGAPVLFVKKKDGTLRLCINYRQLNKVPISNK 60
           MAP ELKELK QLQELVDKG+IR S+SPWGAPVLFVKKKDGTLRLCI+YRQLN++ I NK
Sbjct: 358 MAPAELKELKVQLQELVDKGFIRPSISPWGAPVLFVKKKDGTLRLCIDYRQLNRMTIKNK 417

Query: 61  YSLPRIDDLFDQLKGTSVFSKVDLRSGYHQLKIKEADVPKTTFRT 106
           Y LPRIDDLFDQL+G +VFSKVDLRSGYHQL+IKE DVPKT FRT
Sbjct: 418 YPLPRIDDLFDQLQGATVFSKVDLRSGYHQLRIKEQDVPKTAFRT 462

[Close]

BLAST of MELO3C024740 vs. TrEMBL
Match: A0A061DN15_THECC (Retrotransposon protein OS=Theobroma cacao GN=TCM_003208 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.4e-43
Identity = 86/105 (81.90%), Postives = 96/105 (91.43%), Query Frame = 1


Query: 1   MAPKELKELKTQLQELVDKGYIRLSVSPWGAPVLFVKKKDGTLRLCINYRQLNKVPISNK 60
           MAP ELKELK QLQELVDKG+IR S+SPWGAP+LFVKKKDGTLRLCI+YRQLN++ I NK
Sbjct: 118 MAPAELKELKVQLQELVDKGFIRPSISPWGAPILFVKKKDGTLRLCIDYRQLNRMTIKNK 177

Query: 61  YSLPRIDDLFDQLKGTSVFSKVDLRSGYHQLKIKEADVPKTTFRT 106
           Y LPRIDDLFDQL+G +VFSKVDLRSGYHQL+IKE DVPKT F+T
Sbjct: 178 YPLPRIDDLFDQLQGATVFSKVDLRSGYHQLRIKEQDVPKTAFKT 222

[Close]

BLAST of MELO3C024740 vs. TrEMBL
Match: A0A061DMP8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_003206 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 7.4e-43
Identity = 86/105 (81.90%), Postives = 95/105 (90.48%), Query Frame = 1


Query: 1   MAPKELKELKTQLQELVDKGYIRLSVSPWGAPVLFVKKKDGTLRLCINYRQLNKVPISNK 60
           MAP ELKELK QLQELVDKG+ R S+SPWGAP+LFVKKKDGTLRLCI+YRQLN++ I NK
Sbjct: 315 MAPAELKELKVQLQELVDKGFTRPSISPWGAPILFVKKKDGTLRLCIDYRQLNRMTIKNK 374

Query: 61  YSLPRIDDLFDQLKGTSVFSKVDLRSGYHQLKIKEADVPKTTFRT 106
           Y LPRIDDLFDQL+G +VFSKVDLRSGYHQL+IKE DVPKT FRT
Sbjct: 375 YPLPRIDDLFDQLQGATVFSKVDLRSGYHQLRIKEQDVPKTAFRT 419

[Close]

BLAST of MELO3C024740 vs. TrEMBL
Match: A0A061E5E3_THECC (DNA/RNA polymerases superfamily protein OS=Theobroma cacao GN=TCM_009998 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.3e-42
Identity = 86/105 (81.90%), Postives = 95/105 (90.48%), Query Frame = 1


Query: 1   MAPKELKELKTQLQELVDKGYIRLSVSPWGAPVLFVKKKDGTLRLCINYRQLNKVPISNK 60
           MAP ELKELK QLQ+LVDKG+IR S+SPWGAPVLFVKKKDGTLRLCI+YRQLN+V I NK
Sbjct: 598 MAPAELKELKAQLQDLVDKGFIRPSISPWGAPVLFVKKKDGTLRLCIDYRQLNRVTIKNK 657

Query: 61  YSLPRIDDLFDQLKGTSVFSKVDLRSGYHQLKIKEADVPKTTFRT 106
           Y LPRIDDLFDQL+G  VFSK+DLRSGY+QL+IKE DVPKT FRT
Sbjct: 658 YPLPRIDDLFDQLRGAMVFSKIDLRSGYYQLRIKEQDVPKTAFRT 702

[Close]

BLAST of MELO3C024740 vs. TrEMBL
Match: A0A061FC59_THECC (Retrotransposon protein, putative OS=Theobroma cacao GN=TCM_033634 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.3e-42
Identity = 86/105 (81.90%), Postives = 95/105 (90.48%), Query Frame = 1


Query: 1   MAPKELKELKTQLQELVDKGYIRLSVSPWGAPVLFVKKKDGTLRLCINYRQLNKVPISNK 60
           MAP ELKELK QLQ+LVDKG+IR S+SPWGAPVLFVKKKDGTLRLCI+YRQLN+V I NK
Sbjct: 118 MAPAELKELKAQLQDLVDKGFIRPSISPWGAPVLFVKKKDGTLRLCIDYRQLNRVTIKNK 177

Query: 61  YSLPRIDDLFDQLKGTSVFSKVDLRSGYHQLKIKEADVPKTTFRT 106
           Y LPRIDDLFDQL+G  VFSK+DLRSGY+QL+IKE DVPKT FRT
Sbjct: 178 YPLPRIDDLFDQLRGAMVFSKIDLRSGYYQLRIKEQDVPKTAFRT 222

[Close]

BLAST of MELO3C024740 vs. NCBI nr
Match: gi|515538865|ref|WP_016971918.1| (hypothetical protein [Pseudomonas tolaasii])

HSP 1 Score: 184.9 bits (468), Expect = 7.4e-44
Identity = 87/105 (82.86%), Postives = 96/105 (91.43%), Query Frame = 1


Query: 1   MAPKELKELKTQLQELVDKGYIRLSVSPWGAPVLFVKKKDGTLRLCINYRQLNKVPISNK 60
           M P EL+ELKTQLQEL+DKG+IR SVSPWGAPVLFVKKKDGTLRLCI+YRQLNKV + NK
Sbjct: 1   MVPTELRELKTQLQELLDKGFIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTVKNK 60

Query: 61  YSLPRIDDLFDQLKGTSVFSKVDLRSGYHQLKIKEADVPKTTFRT 106
           Y LPRIDDLFDQLKG  VFSK+DLRSGYHQL++K+ADVPKT FRT
Sbjct: 61  YPLPRIDDLFDQLKGAEVFSKIDLRSGYHQLRVKDADVPKTAFRT 105

[Close]

BLAST of MELO3C024740 vs. NCBI nr
Match: gi|590566597|ref|XP_007010278.1| (Uncharacterized protein TCM_043787 [Theobroma cacao])

HSP 1 Score: 183.3 bits (464), Expect = 2.1e-43
Identity = 88/105 (83.81%), Postives = 96/105 (91.43%), Query Frame = 1


Query: 1   MAPKELKELKTQLQELVDKGYIRLSVSPWGAPVLFVKKKDGTLRLCINYRQLNKVPISNK 60
           MAP ELKELK QLQELVDKG+IR S+SPWGAPVLFVKKKDGTLRLCI+YRQLN++ I NK
Sbjct: 358 MAPAELKELKVQLQELVDKGFIRPSISPWGAPVLFVKKKDGTLRLCIDYRQLNRMTIKNK 417

Query: 61  YSLPRIDDLFDQLKGTSVFSKVDLRSGYHQLKIKEADVPKTTFRT 106
           Y LPRIDDLFDQL+G +VFSKVDLRSGYHQL+IKE DVPKT FRT
Sbjct: 418 YPLPRIDDLFDQLQGATVFSKVDLRSGYHQLRIKEQDVPKTAFRT 462

[Close]

BLAST of MELO3C024740 vs. NCBI nr
Match: gi|590714511|ref|XP_007049933.1| (Retrotransposon protein [Theobroma cacao])

HSP 1 Score: 181.8 bits (460), Expect = 6.3e-43
Identity = 86/105 (81.90%), Postives = 96/105 (91.43%), Query Frame = 1


Query: 1   MAPKELKELKTQLQELVDKGYIRLSVSPWGAPVLFVKKKDGTLRLCINYRQLNKVPISNK 60
           MAP ELKELK QLQELVDKG+IR S+SPWGAP+LFVKKKDGTLRLCI+YRQLN++ I NK
Sbjct: 118 MAPAELKELKVQLQELVDKGFIRPSISPWGAPILFVKKKDGTLRLCIDYRQLNRMTIKNK 177

Query: 61  YSLPRIDDLFDQLKGTSVFSKVDLRSGYHQLKIKEADVPKTTFRT 106
           Y LPRIDDLFDQL+G +VFSKVDLRSGYHQL+IKE DVPKT F+T
Sbjct: 178 YPLPRIDDLFDQLQGATVFSKVDLRSGYHQLRIKEQDVPKTAFKT 222

[Close]

BLAST of MELO3C024740 vs. NCBI nr
Match: gi|590714507|ref|XP_007049932.1| (Uncharacterized protein TCM_003206 [Theobroma cacao])

HSP 1 Score: 181.0 bits (458), Expect = 1.1e-42
Identity = 86/105 (81.90%), Postives = 95/105 (90.48%), Query Frame = 1


Query: 1   MAPKELKELKTQLQELVDKGYIRLSVSPWGAPVLFVKKKDGTLRLCINYRQLNKVPISNK 60
           MAP ELKELK QLQELVDKG+ R S+SPWGAP+LFVKKKDGTLRLCI+YRQLN++ I NK
Sbjct: 315 MAPAELKELKVQLQELVDKGFTRPSISPWGAPILFVKKKDGTLRLCIDYRQLNRMTIKNK 374

Query: 61  YSLPRIDDLFDQLKGTSVFSKVDLRSGYHQLKIKEADVPKTTFRT 106
           Y LPRIDDLFDQL+G +VFSKVDLRSGYHQL+IKE DVPKT FRT
Sbjct: 375 YPLPRIDDLFDQLQGATVFSKVDLRSGYHQLRIKEQDVPKTAFRT 419

[Close]

BLAST of MELO3C024740 vs. NCBI nr
Match: gi|848868789|ref|XP_012835023.1| (PREDICTED: uncharacterized protein LOC105955775 [Erythranthe guttata])

HSP 1 Score: 180.3 bits (456), Expect = 1.8e-42
Identity = 85/105 (80.95%), Postives = 96/105 (91.43%), Query Frame = 1


Query: 1   MAPKELKELKTQLQELVDKGYIRLSVSPWGAPVLFVKKKDGTLRLCINYRQLNKVPISNK 60
           MAP ELKELK Q+QE +DKGY+R S SPWGAPVLFVKKKDG+LRLCI+YR+LNKV I NK
Sbjct: 542 MAPMELKELKDQVQEFLDKGYVRPSHSPWGAPVLFVKKKDGSLRLCIDYRELNKVTIKNK 601

Query: 61  YSLPRIDDLFDQLKGTSVFSKVDLRSGYHQLKIKEADVPKTTFRT 106
           Y LPRIDDLFDQL+G+SVFSK+DLRSGYHQLKIKE+D+PKT FRT
Sbjct: 602 YPLPRIDDLFDQLQGSSVFSKIDLRSGYHQLKIKESDIPKTAFRT 646

The following BLAST results are available for this feature:

BLAST of MELO3C024740 vs. Swiss-Prot


Match Name	E-value	Identity	Description
YG31B_YEAST	4.8e-19	45.10	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
YI31B_YEAST	4.8e-19	45.10	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
TF23_SCHPO	1.9e-15	35.58	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
TF22_SCHPO	1.9e-15	35.58	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
TF25_SCHPO	1.9e-15	35.58	Transposon Tf2-5 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of MELO3C024740 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A061FQA2_THECC	1.5e-43	83.81	Uncharacterized protein OS=Theobroma cacao GN=TCM_043787 PE=4 SV=1	[more]
A0A061DN15_THECC	4.4e-43	81.90	Retrotransposon protein OS=Theobroma cacao GN=TCM_003208 PE=4 SV=1	[more]
A0A061DMP8_THECC	7.4e-43	81.90	Uncharacterized protein OS=Theobroma cacao GN=TCM_003206 PE=4 SV=1	[more]
A0A061E5E3_THECC	1.3e-42	81.90	DNA/RNA polymerases superfamily protein OS=Theobroma cacao GN=TCM_009998 PE=4 SV...	[more]
A0A061FC59_THECC	1.3e-42	81.90	Retrotransposon protein, putative OS=Theobroma cacao GN=TCM_033634 PE=4 SV=1	[more]

BLAST of MELO3C024740 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|515538865\|ref\|WP_016971918.1\|	7.4e-44	82.86	hypothetical protein [Pseudomonas tolaasii]	[more]
gi\|590566597\|ref\|XP_007010278.1\|	2.1e-43	83.81	Uncharacterized protein TCM_043787 [Theobroma cacao]	[more]
gi\|590714511\|ref\|XP_007049933.1\|	6.3e-43	81.90	Retrotransposon protein [Theobroma cacao]	[more]
gi\|590714507\|ref\|XP_007049932.1\|	1.1e-42	81.90	Uncharacterized protein TCM_003206 [Theobroma cacao]	[more]
gi\|848868789\|ref\|XP_012835023.1\|	1.8e-42	80.95	PREDICTED: uncharacterized protein LOC105955775 [Erythranthe guttata]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C024740T1	MELO3C024740T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.10.10.10		coord: 2..75 score: 1.2
None	No IPR available	PANTHER	PTHR24559	FAMILY NOT NAMED	coord: 29..105 score: 2.5
None	No IPR available	PANTHER	PTHR24559:SF207	SUBFAMILY NOT NAMED	coord: 29..105 score: 2.5
None	No IPR available	unknown	SSF56672	DNA/RNA polymerases	coord: 2..105 score: 4.67

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C024740	Wax gourd	mewgoB126
MELO3C024740	Cucumber (Gy14) v1	cgymeB440
MELO3C024740	Cucurbita maxima (Rimu)	cmameB493
MELO3C024740	Cucurbita maxima (Rimu)	cmameB534
MELO3C024740	Cucurbita moschata (Rifu)	cmomeB483
MELO3C024740	Cucurbita moschata (Rifu)	cmomeB524
MELO3C024740	Wild cucumber (PI 183967)	cpimeB096
MELO3C024740	Cucumber (Chinese Long) v2	cumeB087
MELO3C024740	Watermelon (Charleston Gray)	mewcgB090
MELO3C024740	Watermelon (97103) v1	mewmB125
MELO3C024740	Cucurbita pepo (Zucchini)	cpemeB260
MELO3C024740	Cucurbita pepo (Zucchini)	cpemeB672
MELO3C024740	Bottle gourd (USVL1VR-Ls)	lsimeB053
MELO3C024740	Cucumber (Gy14) v2	cgybmeB083
MELO3C024740	Silver-seed gourd	carmeB0935
MELO3C024740	Silver-seed gourd	carmeB1022
MELO3C024740	Cucumber (Chinese Long) v3	cucmeB103
MELO3C024740	Watermelon (97103) v2	mewmbB092