MELO3C024713.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C024713.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptionflocculation protein FLO11-like
Locationchr02 : 21647758 .. 21648200 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGATCACATATCAATTGCTCGTCTTATGCGTCGTCATCGAGGGGCTTTTGTAGCCTCTCTTCACTGCCATCTACTTGATACCTCTACCCTTACAGAGAAAGCTTATGCACTCACTGCGGGATTCTCTACTCCAACTGATGATATATTTGTTTCGGCTAGTGCATCTTCTTCTACAAAGAAGGTCTCTGCCTCTTTTGAGGGAGTTTCTGCTCCGGCTAGTGCATCTACTCGTACGAAGGGAGCTTCTGCACCAACAGAAGAGGTTTATGCTCTGGCTGGTTCGTTTATTCCTTCACTGGTCAAGCCTCTTCATTGTCCTCCTTTCAAGGGTCAAAAAGTAATTACTACTAATGTCGGGAATGGAAAGTTGCCTCCTAACGTCCCTGATATTTCTATTGATGGGGTCTCGTTCCATTCTGAAGATAGTGTACATAAATAA

mRNA sequence

ATGAGGATCACATATCAATTGCTCGTCTTATGCGTCGTCATCGAGGGGCTTTTGTAGCCTCTCTTCACTGCCATCTACTTGATACCTCTACCCTTACAGAGAAAGCTTATGCACTCACTGCGGGATTCTCTACTCCAACTGATGATATATTTGTTTCGGCTAGTGCATCTTCTTCTACAAAGAAGGTCTCTGCCTCTTTTGAGGGAGTTTCTGCTCCGGCTAGTGCATCTACTCGTACGAAGGGAGCTTCTGCACCAACAGAAGAGGTTTATGCTCTGGCTGGTTCGTTTATTCCTTCACTGGTCAAGCCTCTTCATTGTCCTCCTTTCAAGGGTCAAAAAGTAATTACTACTAATGTCGGGAATGGAAAGTTGCCTCCTAACGTCCCTGATATTTCTATTGATGGGGTCTCGTTCCATTCTGAAGATAGTGTACATAAATAA

Coding sequence (CDS)

ATGCGTCGTCATCGAGGGGCTTTTGTAGCCTCTCTTCACTGCCATCTACTTGATACCTCTACCCTTACAGAGAAAGCTTATGCACTCACTGCGGGATTCTCTACTCCAACTGATGATATATTTGTTTCGGCTAGTGCATCTTCTTCTACAAAGAAGGTCTCTGCCTCTTTTGAGGGAGTTTCTGCTCCGGCTAGTGCATCTACTCGTACGAAGGGAGCTTCTGCACCAACAGAAGAGGTTTATGCTCTGGCTGGTTCGTTTATTCCTTCACTGGTCAAGCCTCTTCATTGTCCTCCTTTCAAGGGTCAAAAAGTAATTACTACTAATGTCGGGAATGGAAAGTTGCCTCCTAACGTCCCTGATATTTCTATTGATGGGGTCTCGTTCCATTCTGAAGATAGTGTACATAAATAA

Protein sequence

MRRHRGAFVASLHCHLLDTSTLTEKAYALTAGFSTPTDDIFVSASASSSTKKVSASFEGVSAPASASTRTKGASAPTEEVYALAGSFIPSLVKPLHCPPFKGQKVITTNVGNGKLPPNVPDISIDGVSFHSEDSVHK
Homology
[Close]
BLAST of MELO3C024713.2 vs. NCBI nr
Match: XP_008441650.1 (PREDICTED: uncharacterized protein LOC103485731 [Cucumis melo])

HSP 1 Score: 61.6 bits (148), Expect = 2.4e-06
Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = 0 

Query: 98  PPFKGQKVITTNVGNGKLPPNVPDISIDGVSFHSEDSVHK 138
           PP KGQ+V++T  G  K+PPNVP + IDGVSFHSE+  HK
Sbjct: 198 PPTKGQRVVSTKTGRQKVPPNVPSVPIDGVSFHSEEEAHK 237

[Close]
BLAST of MELO3C024713.2 vs. NCBI nr
Match: XP_008441642.1 (PREDICTED: uncharacterized protein LOC103485722 [Cucumis melo])

HSP 1 Score: 57.8 bits (138), Expect = 3.4e-05
Identity = 24/43 (55.81%), Postives = 30/43 (69.77%), Query Frame = 0 

Query: 95  LHCPPFKGQKVITTNVGNGKLPPNVPDISIDGVSFHSEDSVHK 138
           L  PP +GQ+V +T  G  K+PPNVP + IDGVSF SE+  HK
Sbjct: 366 LRRPPVRGQRVFSTKAGRRKIPPNVPSVPIDGVSFRSEEGAHK 408

[Close]
BLAST of MELO3C024713.2 vs. NCBI nr
Match: XP_008457140.1 (PREDICTED: flocculation protein FLO11-like [Cucumis melo])

HSP 1 Score: 57.8 bits (138), Expect = 3.4e-05
Identity = 25/40 (62.50%), Postives = 30/40 (75.00%), Query Frame = 0 

Query: 98  PPFKGQKVITTNVGNGKLPPNVPDISIDGVSFHSEDSVHK 138
           PP KGQ+V++T  G  K+PPNV  I IDGVSFHSE+  HK
Sbjct: 284 PPTKGQRVVSTKDGRRKVPPNVSSIPIDGVSFHSEEGAHK 323

[Close]
BLAST of MELO3C024713.2 vs. NCBI nr
Match: XP_008452349.1 (PREDICTED: uncharacterized protein LOC103493408 [Cucumis melo])

HSP 1 Score: 56.2 bits (134), Expect = 1.0e-04
Identity = 26/50 (52.00%), Postives = 35/50 (70.00%), Query Frame = 0 

Query: 88  IPSLVKPLHCPPFKGQKVITTNVGNGKLPPNVPDISIDGVSFHSEDSVHK 138
           + S  +P H  P +GQ+VI+T VG  K+P NVP + IDGVSFHSE+  H+
Sbjct: 62  VDSSSRPRH-SPVRGQRVISTKVGRRKIPLNVPHMPIDGVSFHSEEGAHR 110

[Close]
BLAST of MELO3C024713.2 vs. NCBI nr
Match: XP_008462125.1 (PREDICTED: uncharacterized protein LOC103500554 [Cucumis melo])

HSP 1 Score: 56.2 bits (134), Expect = 1.0e-04
Identity = 23/40 (57.50%), Postives = 30/40 (75.00%), Query Frame = 0 

Query: 98  PPFKGQKVITTNVGNGKLPPNVPDISIDGVSFHSEDSVHK 138
           PP KGQ+V++T  G  K+PPNV  + IDGVSFHS++  HK
Sbjct: 404 PPTKGQQVVSTKAGRRKVPPNVSSLPIDGVSFHSKEGAHK 443

[Close]
BLAST of MELO3C024713.2 vs. TrEMBL
Match: tr|A0A1S3B3W7|A0A1S3B3W7_CUCME (uncharacterized protein LOC103485731 OS=Cucumis melo OX=3656 GN=LOC103485731 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.6e-06
Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = 0 

Query: 98  PPFKGQKVITTNVGNGKLPPNVPDISIDGVSFHSEDSVHK 138
           PP KGQ+V++T  G  K+PPNVP + IDGVSFHSE+  HK
Sbjct: 198 PPTKGQRVVSTKTGRQKVPPNVPSVPIDGVSFHSEEEAHK 237

[Close]
BLAST of MELO3C024713.2 vs. TrEMBL
Match: tr|A0A1S3C4X0|A0A1S3C4X0_CUCME (flocculation protein FLO11-like OS=Cucumis melo OX=3656 GN=LOC103496886 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.3e-05
Identity = 25/40 (62.50%), Postives = 30/40 (75.00%), Query Frame = 0 

Query: 98  PPFKGQKVITTNVGNGKLPPNVPDISIDGVSFHSEDSVHK 138
           PP KGQ+V++T  G  K+PPNV  I IDGVSFHSE+  HK
Sbjct: 284 PPTKGQRVVSTKDGRRKVPPNVSSIPIDGVSFHSEEGAHK 323

[Close]
BLAST of MELO3C024713.2 vs. TrEMBL
Match: tr|A0A1S3B3W2|A0A1S3B3W2_CUCME (uncharacterized protein LOC103485722 OS=Cucumis melo OX=3656 GN=LOC103485722 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.3e-05
Identity = 24/43 (55.81%), Postives = 30/43 (69.77%), Query Frame = 0 

Query: 95  LHCPPFKGQKVITTNVGNGKLPPNVPDISIDGVSFHSEDSVHK 138
           L  PP +GQ+V +T  G  K+PPNVP + IDGVSF SE+  HK
Sbjct: 366 LRRPPVRGQRVFSTKAGRRKIPPNVPSVPIDGVSFRSEEGAHK 408

[Close]
BLAST of MELO3C024713.2 vs. TrEMBL
Match: tr|A0A1S3CHP9|A0A1S3CHP9_CUCME (uncharacterized protein LOC103500554 OS=Cucumis melo OX=3656 GN=LOC103500554 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 6.6e-05
Identity = 23/40 (57.50%), Postives = 30/40 (75.00%), Query Frame = 0 

Query: 98  PPFKGQKVITTNVGNGKLPPNVPDISIDGVSFHSEDSVHK 138
           PP KGQ+V++T  G  K+PPNV  + IDGVSFHS++  HK
Sbjct: 404 PPTKGQQVVSTKAGRRKVPPNVSSLPIDGVSFHSKEGAHK 443

[Close]
BLAST of MELO3C024713.2 vs. TrEMBL
Match: tr|A0A1S3BUF5|A0A1S3BUF5_CUCME (uncharacterized protein LOC103493408 OS=Cucumis melo OX=3656 GN=LOC103493408 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 6.6e-05
Identity = 26/50 (52.00%), Postives = 35/50 (70.00%), Query Frame = 0 

Query: 88  IPSLVKPLHCPPFKGQKVITTNVGNGKLPPNVPDISIDGVSFHSEDSVHK 138
           + S  +P H  P +GQ+VI+T VG  K+P NVP + IDGVSFHSE+  H+
Sbjct: 62  VDSSSRPRH-SPVRGQRVISTKVGRRKIPLNVPHMPIDGVSFHSEEGAHR 110

The following BLAST results are available for this feature:
BLAST of MELO3C024713.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008441650.12.4e-0662.50PREDICTED: uncharacterized protein LOC103485731 [Cucumis melo][more]
XP_008441642.13.4e-0555.81PREDICTED: uncharacterized protein LOC103485722 [Cucumis melo][more]
XP_008457140.13.4e-0562.50PREDICTED: flocculation protein FLO11-like [Cucumis melo][more]
XP_008452349.11.0e-0452.00PREDICTED: uncharacterized protein LOC103493408 [Cucumis melo][more]
XP_008462125.11.0e-0457.50PREDICTED: uncharacterized protein LOC103500554 [Cucumis melo][more]
BLAST of MELO3C024713.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C024713.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C024713.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3B3W7|A0A1S3B3W7_CUCME1.6e-0662.50uncharacterized protein LOC103485731 OS=Cucumis melo OX=3656 GN=LOC103485731 PE=... [more]
tr|A0A1S3C4X0|A0A1S3C4X0_CUCME2.3e-0562.50flocculation protein FLO11-like OS=Cucumis melo OX=3656 GN=LOC103496886 PE=4 SV=... [more]
tr|A0A1S3B3W2|A0A1S3B3W2_CUCME2.3e-0555.81uncharacterized protein LOC103485722 OS=Cucumis melo OX=3656 GN=LOC103485722 PE=... [more]
tr|A0A1S3CHP9|A0A1S3CHP9_CUCME6.6e-0557.50uncharacterized protein LOC103500554 OS=Cucumis melo OX=3656 GN=LOC103500554 PE=... [more]
tr|A0A1S3BUF5|A0A1S3BUF5_CUCME6.6e-0552.00uncharacterized protein LOC103493408 OS=Cucumis melo OX=3656 GN=LOC103493408 PE=... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C024713.2.1MELO3C024713.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C024713.2Bottle gourd (USVL1VR-Ls)lsimedB427
MELO3C024713.2Watermelon (Charleston Gray)medwcgB248
MELO3C024713.2Watermelon (97103) v1medwmB285
MELO3C024713.2Silver-seed gourdcarmedB0038
MELO3C024713.2Silver-seed gourdcarmedB0136
MELO3C024713.2Watermelon (97103) v2medwmbB249
MELO3C024713.2Cucurbita maxima (Rimu)cmamedB063
MELO3C024713.2Cucurbita maxima (Rimu)cmamedB120
MELO3C024713.2Cucurbita moschata (Rifu)cmomedB055
MELO3C024713.2Cucurbita moschata (Rifu)cmomedB108