MELO3C024659 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C024659
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionV-type proton ATPase subunit d 2
Locationchr2 : 19817951 .. 19818202 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCGAGAAAAAGAAGAAGACCAGTTCCTTCTCACGAAGAATTCAATTATGACCTCCATCGCTGGAGCTAAATCTGAGGCAGATCTCCAAGCGGTCATGGAAATAGTCATCCACACTATTTCCAACGATAACAAGGAGGATGACCCTGAAGATAGTGAAATTTCTTCAGATTCATCCGTCAACGATATTGAATTTGACAATGATCCATACTACAACTTCGATATTTTCGACCCCTATTTGGATTCCTAA

mRNA sequence

ATGTCTCGAGAAAAAGAAGAAGACCAGTTCCTTCTCACGAAGAATTCAATTATGACCTCCATCGCTGGAGCTAAATCTGAGGCAGATCTCCAAGCGGTCATGGAAATAGTCATCCACACTATTTCCAACGATAACAAGGAGGATGACCCTGAAGATAGTGAAATTTCTTCAGATTCATCCGTCAACGATATTGAATTTGACAATGATCCATACTACAACTTCGATATTTTCGACCCCTATTTGGATTCCTAA

Coding sequence (CDS)

ATGTCTCGAGAAAAAGAAGAAGACCAGTTCCTTCTCACGAAGAATTCAATTATGACCTCCATCGCTGGAGCTAAATCTGAGGCAGATCTCCAAGCGGTCATGGAAATAGTCATCCACACTATTTCCAACGATAACAAGGAGGATGACCCTGAAGATAGTGAAATTTCTTCAGATTCATCCGTCAACGATATTGAATTTGACAATGATCCATACTACAACTTCGATATTTTCGACCCCTATTTGGATTCCTAA

Protein sequence

MSREKEEDQFLLTKNSIMTSIAGAKSEADLQAVMEIVIHTISNDNKEDDPEDSEISSDSSVNDIEFDNDPYYNFDIFDPYLDS*
Homology
[Close]
BLAST of MELO3C024659 vs. TrEMBL
Match: A0A0A0KXT5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G097660 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 2.9e-26
Identity = 61/80 (76.25%), Postives = 69/80 (86.25%), Query Frame = 1 

Query: 4   EKEEDQFLLTKNSIMTSIAGAKSEADLQAVMEIVIHTISNDNKEDDPEDSEISSDSSVND 63
           ++EEDQFLL KNSIMT IAGAKSEADLQ VME VIHTI +D+KE+D ED+ ISS+S  ND
Sbjct: 60  QEEEDQFLLRKNSIMTFIAGAKSEADLQTVMETVIHTIYDDDKENDVEDTRISSNSFAND 119

Query: 64  IEFDNDPYYNFDIFDPYLDS 84
           I+FDNDPYYNFDI DPY DS
Sbjct: 120 IDFDNDPYYNFDISDPYFDS 139

[Close]
BLAST of MELO3C024659 vs. NCBI nr
Match: gi|700198501|gb|KGN53659.1| (hypothetical protein Csa_4G097660 [Cucumis sativus])

HSP 1 Score: 125.6 bits (314), Expect = 4.2e-26
Identity = 61/80 (76.25%), Postives = 69/80 (86.25%), Query Frame = 1 

Query: 4   EKEEDQFLLTKNSIMTSIAGAKSEADLQAVMEIVIHTISNDNKEDDPEDSEISSDSSVND 63
           ++EEDQFLL KNSIMT IAGAKSEADLQ VME VIHTI +D+KE+D ED+ ISS+S  ND
Sbjct: 60  QEEEDQFLLRKNSIMTFIAGAKSEADLQTVMETVIHTIYDDDKENDVEDTRISSNSFAND 119

Query: 64  IEFDNDPYYNFDIFDPYLDS 84
           I+FDNDPYYNFDI DPY DS
Sbjct: 120 IDFDNDPYYNFDISDPYFDS 139

The following BLAST results are available for this feature:
BLAST of MELO3C024659 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KXT5_CUCSA2.9e-2676.25Uncharacterized protein OS=Cucumis sativus GN=Csa_4G097660 PE=4 SV=1[more]
BLAST of MELO3C024659 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700198501|gb|KGN53659.1|4.2e-2676.25hypothetical protein Csa_4G097660 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C024659T1MELO3C024659T1mRNA