MELO3C024639 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C024639
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	E3 ubiquitin-protein ligase ATL42
Location	chr2 : 19422801 .. 19423247 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTGGGGCCATGTCCAGCAGTAGATTCTCTTCTTTGGAATCAGAAAGCATTCGCCGATCAGCAACAAGAGAAAGAGAGGGCAAAAGGACTTCACAAATTAAGGAAGCGATGGAAATGAAGAGATCATTTGAGAGGAGGATAAGCATAGCTGAGAAAAATAGCTTAGTTTCAATCTCAGGAATTTCATCTACCTCAGATTCTAATGCAAGTACATCAAAGACAACAAATCTTAATGAAAGATCTGTCTCAGACACCACTGCATTTTCAAGATTTGGTTATTTTAATGAGAATGCAATAAGAGACAGTTCTATGATTGAAGCTGATGCAAAAAGTTACAGAATTAGGCAGCTATGGTTGCCAATAGCTAGAAGAACAGTGCAATGGTTTGCCAATAGGGAAGAAAGGTCTCGACTCTCAAAGTACACACAGCAGCCAGATGCATAG

mRNA sequence

ATGCTTGGGGCCATGTCCAGCAGTAGATTCTCTTCTTTGGAATCAGAAAGCATTCGCCGATCAGCAACAAGAGAAAGAGAGGGCAAAAGGACTTCACAAATTAAGGAAGCGATGGAAATGAAGAGATCATTTGAGAGGAGGATAAGCATAGCTGAGAAAAATAGCTTAGTTTCAATCTCAGGAATTTCATCTACCTCAGATTCTAATGCAAGTACATCAAAGACAACAAATCTTAATGAAAGATCTGTCTCAGACACCACTGCATTTTCAAGATTTGGTTATTTTAATGAGAATGCAATAAGAGACAGTTCTATGATTGAAGCTGATGCAAAAAGTTACAGAATTAGGCAGCTATGGTTGCCAATAGCTAGAAGAACAGTGCAATGGTTTGCCAATAGGGAAGAAAGGTCTCGACTCTCAAAGTACACACAGCAGCCAGATGCATAG

Coding sequence (CDS)

ATGCTTGGGGCCATGTCCAGCAGTAGATTCTCTTCTTTGGAATCAGAAAGCATTCGCCGATCAGCAACAAGAGAAAGAGAGGGCAAAAGGACTTCACAAATTAAGGAAGCGATGGAAATGAAGAGATCATTTGAGAGGAGGATAAGCATAGCTGAGAAAAATAGCTTAGTTTCAATCTCAGGAATTTCATCTACCTCAGATTCTAATGCAAGTACATCAAAGACAACAAATCTTAATGAAAGATCTGTCTCAGACACCACTGCATTTTCAAGATTTGGTTATTTTAATGAGAATGCAATAAGAGACAGTTCTATGATTGAAGCTGATGCAAAAAGTTACAGAATTAGGCAGCTATGGTTGCCAATAGCTAGAAGAACAGTGCAATGGTTTGCCAATAGGGAAGAAAGGTCTCGACTCTCAAAGTACACACAGCAGCCAGATGCATAG

Protein sequence

MLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSISGISSTSDSNASTSKTTNLNERSVSDTTAFSRFGYFNENAIRDSSMIEADAKSYRIRQLWLPIARRTVQWFANREERSRLSKYTQQPDA*

Homology

[Close]

BLAST of MELO3C024639 vs. Swiss-Prot
Match: ATL42_ARATH (E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana GN=ATL42 PE=1 SV=2)

HSP 1 Score: 73.2 bits (178), Expect = 2.8e-12
Identity = 53/154 (34.42%), Postives = 80/154 (51.95%), Query Frame = 1


Query: 1   MLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSIS 60
           M+ ++SS RFSSL+   ++R    ++ G    +IKE ME KR  E +++     S+ ++ 
Sbjct: 287 MVNSISSERFSSLDH--VKRGDEEDQIG--ILRIKEEMEAKRMLENKLT-----SMTTMF 346

Query: 61  GISSTSDSNASTSKTTNLNERSVSDTTAFSRF-----GYFNENAIRDSSMIE--ADAKSY 120
              +    + S S       RSVSD TA  R      G  + +A   +S ++   +    
Sbjct: 347 SSENGDSGSKSRSVMIEPGRRSVSDITAVPRLSISIHGDCSGSAAETASALQNGGNETEE 406

Query: 121 RIRQLWLPIARRTVQWFANREERSRLSKYTQQPD 148
           R R+LWLPIAR+T QWFANRE+RS+++   Q  D
Sbjct: 407 RRRRLWLPIARKTAQWFANREKRSQINTTHQHFD 431

[Close]

BLAST of MELO3C024639 vs. TrEMBL
Match: A0A061GMH2_THECC (RING/U-box superfamily protein, putative OS=Theobroma cacao GN=TCM_037822 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.7e-22
Identity = 69/153 (45.10%), Postives = 95/153 (62.09%), Query Frame = 1


Query: 1   MLGAMSSSRFSSLESESIRRSA-TREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSI 60
           ML  MSS+RFSSLE+    +S  TR  E K+  +IKE +E+KR FE ++S   KN+ VS 
Sbjct: 273 MLNEMSSNRFSSLETNDHGQSTITRPIENKQIMKIKEELEIKRLFESKVSSINKNNPVSA 332

Query: 61  SGISSTSDSNASTSKTTNL----NERSVSDTTAFSRFGYFN-ENAIRDSSMIEADAKSYR 120
             + STS+ +A++S T+ +     +RS+S+ TA SRF   +  N    S + E + K  R
Sbjct: 333 PALPSTSNFSATSSHTSMIVNQAEKRSMSEITALSRFRDVSPRNRTSQSLLSETNTKEER 392

Query: 121 IRQLWLPIARRTVQWFANREERSRLSKYTQQPD 148
           IR+LWLPIAR+TVQWFANRE   +    TQ  D
Sbjct: 393 IRRLWLPIARKTVQWFANRESSQQSQNSTQDLD 425

[Close]

BLAST of MELO3C024639 vs. TrEMBL
Match: M5W8V8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019638mg PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 3.9e-21
Identity = 70/151 (46.36%), Postives = 92/151 (60.93%), Query Frame = 1


Query: 1   MLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSIS 60
           ML  MSS+RFSS        +AT   E     +I+E MEMKR FE ++S   KN+  S  
Sbjct: 274 MLNTMSSNRFSSARLNHEPATATGNEE---IMKIREEMEMKRLFENKVSTMNKNASASSP 333

Query: 61  GISSTSD---SNASTSKTTNLNE-RSVSDTTAFSRFGYFN-ENAIRDSSMIEADAKSYRI 120
              STSD   ++A  S++ N  E RS+S+ TA SRFG    +N  ++ S++E + K  R+
Sbjct: 334 TFPSTSDYIATSAHASRSMNQGEKRSMSEITALSRFGNLGFKNRNKEPSLLENNVKEERM 393

Query: 121 RQLWLPIARRTVQWFANREERSRLSKYTQQP 147
           R+LWLPIARRTVQWFANRE+R      TQQP
Sbjct: 394 RRLWLPIARRTVQWFANREKR------TQQP 415

[Close]

BLAST of MELO3C024639 vs. TrEMBL
Match: B9ILR6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s09200g PE=4 SV=2)

HSP 1 Score: 109.0 bits (271), Expect = 5.0e-21
Identity = 72/156 (46.15%), Postives = 97/156 (62.18%), Query Frame = 1


Query: 1   MLGAMSSSRFSS--LESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVS 60
           ML  MSS+RF +  L+ ES   +A R  E ++  +IKE +EMKR  E ++S   KNS +S
Sbjct: 274 MLHDMSSNRFHTPDLDEES---TANRGIEDEKFLKIKEEIEMKRLLESKVSPVNKNSQIS 333

Query: 61  ISGISSTSDSNASTSKTTNL----NERSVSDTTAFSRFGYF------NENAIRDSSMIEA 120
           I G  STSDS   + +T+ +    + RSVS+ TAFSRF  F      N  + +D S ++A
Sbjct: 334 IQGQPSTSDSKGISGQTSRIINSTDRRSVSEITAFSRFRSFGLKNTINRVSSQDGSNVQA 393

Query: 121 DAKSYRIRQLWLPIARRTVQWFANREERSRLSKYTQ 145
           D    R RQLWLPIARRTVQWFANRE R + ++ T+
Sbjct: 394 D----RQRQLWLPIARRTVQWFANRERRIQQTENTR 422

[Close]

BLAST of MELO3C024639 vs. TrEMBL
Match: F6HH04_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g03420 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 3.3e-20
Identity = 64/152 (42.11%), Postives = 94/152 (61.84%), Query Frame = 1


Query: 1   MLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSIS 60
           ++ AMSS RF+SL+S +   +  R  E     +IKE +E KR FE R+S    ++ VS S
Sbjct: 319 LVHAMSSDRFASLDSNN--SAMGRPIEDWEVMKIKEEIERKRIFESRVSRINHSNPVSSS 378

Query: 61  GISSTSDSNASTSKTTNL----NERSVSDTTAFSRFGYFN-ENAIRDSSMIEADAKSYRI 120
           G+ STS + A++   +       +RS+S+ TA SR+  F+ +N IR+SS+ + + K  R+
Sbjct: 379 GLPSTSKTEANSGHASRFLHPTEKRSMSEITACSRYADFSTKNRIRESSLAQNNIKEERM 438

Query: 121 RQLWLPIARRTVQWFANREERSRLSKYTQQPD 148
           R+LWLPIARRTV+WFANRE   +     Q PD
Sbjct: 439 RRLWLPIARRTVEWFANREGSQQSQNTKQAPD 468

[Close]

BLAST of MELO3C024639 vs. TrEMBL
Match: A0A0B2PZH0_GLYSO (E3 ubiquitin-protein ligase ATL42 OS=Glycine soja GN=glysoja_045770 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.6e-19
Identity = 67/153 (43.79%), Postives = 89/153 (58.17%), Query Frame = 1


Query: 1   MLGAMSSSRFSSLESESIRRSATRER-EGKRTSQIKEAMEMKRSFERRISIAEKNSLVSI 60
           ML   SS+RFS+LES +   S+TR   E ++   IKE ME K SFE ++ +      VS 
Sbjct: 271 MLNDASSNRFSNLESNADMMSSTRGVVENEQIMNIKEEMERKISFESKVGVLNNIKSVSD 330

Query: 61  SGISSTSDSNASTS---KTTNLNE-RSVSDTTAFSRFGYFNEN--AIRDSSMIEADAKSY 120
             +  TSDS   ++   K  N  E RS+S+ TA SRFG         +DSS ++ + K  
Sbjct: 331 KHLLFTSDSAGKSTHAPKYANPGEKRSMSEITAVSRFGDLGMKMRVFKDSSSLQNNLKEE 390

Query: 121 RIRQLWLPIARRTVQWFANREERSRLSKYTQQP 147
           R+RQ+W PIARRT QWF NRE RS+ S+  QQP
Sbjct: 391 RMRQIWFPIARRTAQWFVNRERRSQQSQNKQQP 423

[Close]

BLAST of MELO3C024639 vs. TAIR10
Match: AT4G28890.1 (AT4G28890.1 RING/U-box superfamily protein)

HSP 1 Score: 73.2 bits (178), Expect = 1.6e-13
Identity = 53/154 (34.42%), Postives = 80/154 (51.95%), Query Frame = 1


Query: 1   MLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSIS 60
           M+ ++SS RFSSL+   ++R    ++ G    +IKE ME KR  E +++     S+ ++ 
Sbjct: 287 MVNSISSERFSSLDH--VKRGDEEDQIG--ILRIKEEMEAKRMLENKLT-----SMTTMF 346

Query: 61  GISSTSDSNASTSKTTNLNERSVSDTTAFSRF-----GYFNENAIRDSSMIE--ADAKSY 120
              +    + S S       RSVSD TA  R      G  + +A   +S ++   +    
Sbjct: 347 SSENGDSGSKSRSVMIEPGRRSVSDITAVPRLSISIHGDCSGSAAETASALQNGGNETEE 406

Query: 121 RIRQLWLPIARRTVQWFANREERSRLSKYTQQPD 148
           R R+LWLPIAR+T QWFANRE+RS+++   Q  D
Sbjct: 407 RRRRLWLPIARKTAQWFANREKRSQINTTHQHFD 431

[Close]

BLAST of MELO3C024639 vs. TAIR10
Match: AT2G20030.1 (AT2G20030.1 RING/U-box superfamily protein)

HSP 1 Score: 50.1 bits (118), Expect = 1.4e-06
Identity = 46/149 (30.87%), Postives = 59/149 (39.60%), Query Frame = 1


Query: 1   MLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSIS 60
           ML ++SS RFSS++           R  +   + KE MEMKR       I  K+S     
Sbjct: 277 MLNSVSSDRFSSVD-----------RVHRGNLRDKEDMEMKRML-----IKHKDS----- 336

Query: 61  GISSTSDSNASTSKTTNLNERSVSDTTAFSRF-----GYFNENAIRDSSMIEADAKSYRI 120
                             + R+VS+ T  SR       Y    A    +         R 
Sbjct: 337 ------------------SRRTVSEITTVSREKAVGGSYRGSTASTSQNYAVTATTEERR 386

Query: 121 RQLWLPIARRTVQWFANREERSRLSKYTQ 145
           R+LWLPIARRT QWF NRE+ + L+   Q
Sbjct: 397 RRLWLPIARRTAQWFVNREKSNDLNTTRQ 386

[Close]

BLAST of MELO3C024639 vs. NCBI nr
Match: gi|659125460|ref|XP_008462696.1| (PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Cucumis melo])

HSP 1 Score: 283.5 bits (724), Expect = 2.1e-73
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1


Query: 1   MLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSIS 60
           MLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSIS
Sbjct: 218 MLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSIS 277

Query: 61  GISSTSDSNASTSKTTNLNERSVSDTTAFSRFGYFNENAIRDSSMIEADAKSYRIRQLWL 120
           GISSTSDSNASTSKTTNLNERSVSDTTAFSRFGYFNENAIRDSSMIEADAKSYRIRQLWL
Sbjct: 278 GISSTSDSNASTSKTTNLNERSVSDTTAFSRFGYFNENAIRDSSMIEADAKSYRIRQLWL 337

Query: 121 PIARRTVQWFANREERSRLSKYTQQPDA 149
           PIARRTVQWFANREERSRLSKYTQQPDA
Sbjct: 338 PIARRTVQWFANREERSRLSKYTQQPDA 365

[Close]

BLAST of MELO3C024639 vs. NCBI nr
Match: gi|1009160610|ref|XP_015898444.1| (PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Ziziphus jujuba])

HSP 1 Score: 113.6 bits (283), Expect = 2.9e-22
Identity = 73/153 (47.71%), Postives = 96/153 (62.75%), Query Frame = 1


Query: 1   MLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNS-LVSI 60
           M+  +SS+RF +++S +      R  E +   +IKE MEMKRSFE ++S   KNS  +SI
Sbjct: 272 MISHISSNRFPTMDSNNELFLTGRGSENEEIMKIKEEMEMKRSFESKVSTINKNSGSLSI 331

Query: 61  SGISSTSD--SNASTSKTTNLNE-RSVSDTTAFSRFGYFN-ENAIRDSSMIEADAKSYRI 120
             +   SD  S++ TS+  N  E RS+S+ TA SR+G F+  N I +S       K   I
Sbjct: 332 QVLDPPSDLASSSKTSRAVNQGEKRSMSEITALSRYGNFDMSNRIGESHSSRNSVKEESI 391

Query: 121 RQLWLPIARRTVQWFANREERSRLS-KYTQQPD 148
           R+LWLPIARRTVQWFANRE+RS LS K TQQ D
Sbjct: 392 RRLWLPIARRTVQWFANREKRSHLSQKTTQQLD 424

[Close]

BLAST of MELO3C024639 vs. NCBI nr
Match: gi|590576887|ref|XP_007013082.1| (RING/U-box superfamily protein, putative [Theobroma cacao])

HSP 1 Score: 113.2 bits (282), Expect = 3.8e-22
Identity = 69/153 (45.10%), Postives = 95/153 (62.09%), Query Frame = 1


Query: 1   MLGAMSSSRFSSLESESIRRSA-TREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSI 60
           ML  MSS+RFSSLE+    +S  TR  E K+  +IKE +E+KR FE ++S   KN+ VS 
Sbjct: 273 MLNEMSSNRFSSLETNDHGQSTITRPIENKQIMKIKEELEIKRLFESKVSSINKNNPVSA 332

Query: 61  SGISSTSDSNASTSKTTNL----NERSVSDTTAFSRFGYFN-ENAIRDSSMIEADAKSYR 120
             + STS+ +A++S T+ +     +RS+S+ TA SRF   +  N    S + E + K  R
Sbjct: 333 PALPSTSNFSATSSHTSMIVNQAEKRSMSEITALSRFRDVSPRNRTSQSLLSETNTKEER 392

Query: 121 IRQLWLPIARRTVQWFANREERSRLSKYTQQPD 148
           IR+LWLPIAR+TVQWFANRE   +    TQ  D
Sbjct: 393 IRRLWLPIARKTVQWFANRESSQQSQNSTQDLD 425

[Close]

BLAST of MELO3C024639 vs. NCBI nr
Match: gi|702293656|ref|XP_010047719.1| (PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Eucalyptus grandis])

HSP 1 Score: 110.5 bits (275), Expect = 2.5e-21
Identity = 68/147 (46.26%), Postives = 94/147 (63.95%), Query Frame = 1


Query: 1   MLGAMSSSRFSSLESESIRRSAT---REREGKRTSQIKEAMEMKRSFERRISIAEKNSLV 60
           ML  +SS+RFSSLE E   ++ T   R  E     +IKE M+ KR FE ++S  +KNSLV
Sbjct: 275 MLNDLSSNRFSSLELEGTGQATTTAARTFESGEIMKIKEEMDRKRLFESKLSSIDKNSLV 334

Query: 61  SISGISSTSDSNASTSKTTNL----NERSVSDTTAFSRFGYFN-ENAIRDSSMIEA-DAK 120
           S+ G  ST+   + + + + +    ++RS+S+ T  SRFG  +  N  R+ S+IE  D K
Sbjct: 335 SVPGHPSTAPVESGSVQQSKIMLPADKRSMSEITGVSRFGDSSARNRHREMSLIEGGDFK 394

Query: 121 SYRIRQLWLPIARRTVQWFANREERSR 139
             R+RQ+WLPIARRTVQWFANRE RS+
Sbjct: 395 DERMRQIWLPIARRTVQWFANRERRSQ 421

[Close]

BLAST of MELO3C024639 vs. NCBI nr
Match: gi|595819373|ref|XP_007204494.1| (hypothetical protein PRUPE_ppa019638mg [Prunus persica])

HSP 1 Score: 109.4 bits (272), Expect = 5.5e-21
Identity = 70/151 (46.36%), Postives = 92/151 (60.93%), Query Frame = 1


Query: 1   MLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERRISIAEKNSLVSIS 60
           ML  MSS+RFSS        +AT   E     +I+E MEMKR FE ++S   KN+  S  
Sbjct: 274 MLNTMSSNRFSSARLNHEPATATGNEE---IMKIREEMEMKRLFENKVSTMNKNASASSP 333

Query: 61  GISSTSD---SNASTSKTTNLNE-RSVSDTTAFSRFGYFN-ENAIRDSSMIEADAKSYRI 120
              STSD   ++A  S++ N  E RS+S+ TA SRFG    +N  ++ S++E + K  R+
Sbjct: 334 TFPSTSDYIATSAHASRSMNQGEKRSMSEITALSRFGNLGFKNRNKEPSLLENNVKEERM 393

Query: 121 RQLWLPIARRTVQWFANREERSRLSKYTQQP 147
           R+LWLPIARRTVQWFANRE+R      TQQP
Sbjct: 394 RRLWLPIARRTVQWFANREKR------TQQP 415

The following BLAST results are available for this feature:

BLAST of MELO3C024639 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ATL42_ARATH	2.8e-12	34.42	E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana GN=ATL42 PE=1 SV=2	[more]

BLAST of MELO3C024639 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A061GMH2_THECC	2.7e-22	45.10	RING/U-box superfamily protein, putative OS=Theobroma cacao GN=TCM_037822 PE=4 S...	[more]
M5W8V8_PRUPE	3.9e-21	46.36	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019638mg PE=4 SV=1	[more]
B9ILR6_POPTR	5.0e-21	46.15	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s09200g PE=4 SV=2	[more]
F6HH04_VITVI	3.3e-20	42.11	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g03420 PE=4 SV=...	[more]
A0A0B2PZH0_GLYSO	1.6e-19	43.79	E3 ubiquitin-protein ligase ATL42 OS=Glycine soja GN=glysoja_045770 PE=4 SV=1	[more]

BLAST of MELO3C024639 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G28890.1	1.6e-13	34.42	RING/U-box superfamily protein	[more]
AT2G20030.1	1.4e-06	30.87	RING/U-box superfamily protein	[more]

BLAST of MELO3C024639 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659125460\|ref\|XP_008462696.1\|	2.1e-73	100.00	PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Cucumis melo]	[more]
gi\|1009160610\|ref\|XP_015898444.1\|	2.9e-22	47.71	PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Ziziphus jujuba]	[more]
gi\|590576887\|ref\|XP_007013082.1\|	3.8e-22	45.10	RING/U-box superfamily protein, putative [Theobroma cacao]	[more]
gi\|702293656\|ref\|XP_010047719.1\|	2.5e-21	46.26	PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Eucalyptus grandis]	[more]
gi\|595819373\|ref\|XP_007204494.1\|	5.5e-21	46.36	hypothetical protein PRUPE_ppa019638mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C024639T1	MELO3C024639T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 34..54 scor

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C024639	Silver-seed gourd	carmeB0035
MELO3C024639	Silver-seed gourd	carmeB0572
MELO3C024639	Cucumber (Chinese Long) v3	cucmeB116
MELO3C024639	Watermelon (97103) v2	mewmbB239
MELO3C024639	Watermelon (97103) v2	mewmbB262
MELO3C024639	Wax gourd	mewgoB273
MELO3C024639	Wax gourd	mewgoB290
MELO3C024639	Melon (DHL92) v3.5.1	memeB104
MELO3C024639	Cucurbita moschata (Rifu)	cmomeB098
MELO3C024639	Cucumber (Gy14) v1	cgymeB169
MELO3C024639	Cucurbita maxima (Rimu)	cmameB109
MELO3C024639	Cucurbita maxima (Rimu)	cmameB719
MELO3C024639	Cucurbita moschata (Rifu)	cmomeB140
MELO3C024639	Cucurbita moschata (Rifu)	cmomeB710
MELO3C024639	Wild cucumber (PI 183967)	cpimeB110
MELO3C024639	Watermelon (Charleston Gray)	mewcgB232
MELO3C024639	Watermelon (97103) v1	mewmB284
MELO3C024639	Watermelon (97103) v1	mewmB290
MELO3C024639	Cucurbita pepo (Zucchini)	cpemeB621
MELO3C024639	Cucurbita pepo (Zucchini)	cpemeB751
MELO3C024639	Bottle gourd (USVL1VR-Ls)	lsimeB102