MELO3C024182.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C024182.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionRING-H2 finger protein
Locationchr01 : 4452195 .. 4454881 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAATCGAGTTGAACTGATCATCAATCTTCTTCAATCTTTACCTTCTCTACAACTCCACTACTTTTCTTCAATTTTTTCCCTTTTCGATCCTACTTTCTCTGTTCTCGAGTCCTAAAAGCAATTGAAGTAAGTTTTCGTTAATCCCTTTTCGTGTTCATTTCCTTTCTGTAAGAAATGTTCGCTTTCCTCTAATGGGTTTTGTTTACTTTCTGAATTTGGTAAAGGAAACGATTCTTTGAGCATTTCAGTTTCTTAAAATTCTCTTCTTTTTCACTGGTAGACTGAACTTACTTTGACCTTCAGTGGATTATTGTTCTTTAGCATGTTTGAGGACGGAGGAGGGTTTTCCATTTTCACTAAAATTTGGGTGGTTTTAATCCCTCAAGAGTGTTTTGTGGAATGTTATGAGGATTTGTTGTTCTTGGGTTTTTAGACTGTTGAAATTTCTTTATGTGCCTGGTGGAAGATTTTGTAATTGGATCTTTAGCTATAGGGTTTACTTTTACAGAAATCTATTCTTGAATGGTAGGTGGATCATGATTCATGTGATAAATTGTCGTTTCATATACTATAATGGAATTAAATGAACTCCCGTCTGTTTTTCCTCAATTTTTGCTCCTGATCTCTATCGGTTATGGAAATTTCATTAATTAGTTGCTTAGTTCATTTTTTAGTTCATTTTCTTTCCTGACGAAATATTCATGAACTGTTTGCTTCAGTTATTTATTACATGGTTCATCAAAAAAAAAAAAAGGAGAAAAAGCAAGAGGTTCTTAGTTCTTTGTTTACTTTTGTTTCAGCTCTGTGGTGAAGAAAGGCTTGCTTGCAAATTACAACCTCTAAATCATTGTGTATTCTGATCAATCTACTAATTTTATTCCGGCTGTACCGACTGAGTTTGTGAAGTTTGCTTTAAACACGATGGGTCTCTCCAGTCTCCCAGCTCCGTCTGAAGGAGTTCTGAACGTGATTCTTGTAAACACTGCTCTATCTATTTCCTTGTTCAAATGCATTGTTCGTTTAATCCTTCACATGGTAGGAATCCGTCTCTCATGGCCATCATCTGTAGTCCCTTCAACAGATTCCTTTGAAAGTTCCTCAGAGTTGGGAGATCCCATTTTTGGCTCTTCTTGGAATTACCTTGACATGTTTCGAAACCGATATCCAAGGATTAGATTTGATAAAGTACAGAGTTCAGAACGTCGTGAACATGACTGCTCGGTCTGTTTAACTCAATTTGAACCTGAATCGGTGATAAATCACTTATCTTGTGGCCATCTTTTTCACACAGAATGCTTGGAGAAGTGGCTGGACTACTGGAACATCACATGCCCTCTTTGCAGAACTCCTCTAATGTCTGAAGAAGAGAAATCTTGCTTTTGGTGAGTGTTTAGCATGCTAGAAATCTAGTTAGGGGAAAACTCATGTACAGCATACTCTTAAAGATAATCGTGAGCACATATCCTACCTCCGTCATGACATTTGAAGTTTGATGTGTCTGACTGGTCTTAGAGACCAAAGTTTTGTCACTGTAAATACATGTTTATGAAGTTCTATGCTTCTGGCTTGTGCCTTTAGCTTTGAGTTCATTCACTTTAGCTTTGAGGTAATGCACTATTACTTCACTTTCTTTATATATGGAATTCCCCGAGTATGCTACAAAGTTTTCCAGCTTCTGTCTGTGTGATATTTGGGTTGACAGTGTGGAAATCAATTTCCTGACATTATTGTTTTAATTGATGTGTTGGGAATTGCTCAAATCTTGGTGACAACTTATATGCTATATGTTGTAAGTTTTTTGATGTCGAATACTGTTTGTCTATCAAGCAAGATATTTACTAGAGCATTATGATCATATATCGAAAAGTTCTCACGTTAGTCTTCAGAAAAGATAAGTTTTGAAAAGTACTTCACTTAGTCCTTCGATACTTGTCCTTTTCCTCCTTTCTCGCTACGCTTAAGTTGACTTGAGTCGGTAATAGTCATCTTCATATTTCTGTTAAAACCCCCCTGCTTGTATTCCTTTACTGAACAGAAGGAATGGTACCACTACTTGGTCGCTAACGGACTGTAGTTAGAACAAGGCACGGATCAAATACTAAGTCTTTCCTATTTGACGTTTCTTGCAGTTTTCAGCCTCCTTAAACCTACTAAAATCAAAGTGAAAGCCTCCTCTACTCTATGCTGTGTTGCTGAAAACTGCCTCTCTCCCTCACTTATCTTTGTGAAACTGAACGTTAGAGTTGCTCCATGGAAATCAAGCAGCTCCATCAAAGAGATAGTCAACGTGATTCTGAAGATCATATGCTCGAATACCAAAAGGGTAGAACCAGGATGGACTCCAAAATGAAGAGAGTGAGAGAGTATAGATTAACGTTTTGAAATAAATTAAACAGGTTGATAATAGCTTTGGAGAACTTCTCCCTCAAGCTTGACCTACACATATCTCCCTCTTACGACCTTACTTTAATAGGATAAGTTCTATATGTTGTACAACCATGTCCTTGAATTTAAAATGAAACATATATGCCCATCTTCCTTTGAAGCTGTCTGCTACCAACCAGTCTTCCTTTATTTTTCCATGTAAAGTAATGTAATTCAAGGATGTTGACACGGTCAAATGAATATCTGTTAGAGGAAGCGTTAGGGATAAATAAACTAAAGAAAGACCATTCCAATTTGCCCTA

mRNA sequence

GAATCGAGTTGAACTGATCATCAATCTTCTTCAATCTTTACCTTCTCTACAACTCCACTACTTTTCTTCAATTTTTTCCCTTTTCGATCCTACTTTCTCTGTTCTCGAGTCCTAAAAGCAATTGAACTCTGTGGTGAAGAAAGGCTTGCTTGCAAATTACAACCTCTAAATCATTGTGTATTCTGATCAATCTACTAATTTTATTCCGGCTGTACCGACTGAGTTTGTGAAGTTTGCTTTAAACACGATGGGTCTCTCCAGTCTCCCAGCTCCGTCTGAAGGAGTTCTGAACGTGATTCTTGTAAACACTGCTCTATCTATTTCCTTGTTCAAATGCATTGTTCGTTTAATCCTTCACATGGTAGGAATCCGTCTCTCATGGCCATCATCTGTAGTCCCTTCAACAGATTCCTTTGAAAGTTCCTCAGAGTTGGGAGATCCCATTTTTGGCTCTTCTTGGAATTACCTTGACATGTTTCGAAACCGATATCCAAGGATTAGATTTGATAAAGTACAGAGTTCAGAACGTCGTGAACATGACTGCTCGGTCTGTTTAACTCAATTTGAACCTGAATCGGTGATAAATCACTTATCTTGTGGCCATCTTTTTCACACAGAATGCTTGGAGAAGTGGCTGGACTACTGGAACATCACATGCCCTCTTTGCAGAACTCCTCTAATGTCTGAAGAAGAGAAATCTTGCTTTTGTTTTCAGCCTCCTTAAACCTACTAAAATCAAAGTGAAAGCCTCCTCTACTCTATGCTGTGTTGCTGAAAACTGCCTCTCTCCCTCACTTATCTTTGTGAAACTGAACGTTAGAGTTGCTCCATGGAAATCAAGCAGCTCCATCAAAGAGATAGTCAACGTGATTCTGAAGATCATATGCTCGAATACCAAAAGGGTAGAACCAGGATGGACTCCAAAATGAAGAGAGTGAGAGAGTATAGATTAACGTTTTGAAATAAATTAAACAGGTTGATAATAGCTTTGGAGAACTTCTCCCTCAAGCTTGACCTACACATATCTCCCTCTTACGACCTTACTTTAATAGGATAAGTTCTATATGTTGTACAACCATGTCCTTGAATTTAAAATGAAACATATATGCCCATCTTCCTTTGAAGCTGTCTGCTACCAACCAGTCTTCCTTTATTTTTCCATGTAAAGTAATGTAATTCAAGGATGTTGACACGGTCAAATGAATATCTGTTAGAGGAAGCGTTAGGGATAAATAAACTAAAGAAAGACCATTCCAATTTGCCCTA

Coding sequence (CDS)

ATGGGTCTCTCCAGTCTCCCAGCTCCGTCTGAAGGAGTTCTGAACGTGATTCTTGTAAACACTGCTCTATCTATTTCCTTGTTCAAATGCATTGTTCGTTTAATCCTTCACATGGTAGGAATCCGTCTCTCATGGCCATCATCTGTAGTCCCTTCAACAGATTCCTTTGAAAGTTCCTCAGAGTTGGGAGATCCCATTTTTGGCTCTTCTTGGAATTACCTTGACATGTTTCGAAACCGATATCCAAGGATTAGATTTGATAAAGTACAGAGTTCAGAACGTCGTGAACATGACTGCTCGGTCTGTTTAACTCAATTTGAACCTGAATCGGTGATAAATCACTTATCTTGTGGCCATCTTTTTCACACAGAATGCTTGGAGAAGTGGCTGGACTACTGGAACATCACATGCCCTCTTTGCAGAACTCCTCTAATGTCTGAAGAAGAGAAATCTTGCTTTTGTTTTCAGCCTCCTTAA

Protein sequence

MGLSSLPAPSEGVLNVILVNTALSISLFKCIVRLILHMVGIRLSWPSSVVPSTDSFESSSELGDPIFGSSWNYLDMFRNRYPRIRFDKVQSSERREHDCSVCLTQFEPESVINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFCFQPP
Homology
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BLAST of MELO3C024182.2 vs. NCBI nr
Match: XP_008462033.1 (PREDICTED: probable E3 ubiquitin-protein ligase XERICO [Cucumis melo])

HSP 1 Score: 332.8 bits (852), Expect = 6.4e-88
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0 

Query: 1   MGLSSLPAPSEGVLNVILVNTALSISLFKCIVRLILHMVGIRLSWPSSVVPSTDSFESSS 60
           MGLSSLPAPSEGVLNVILVNTALSISLFKCIVRLILHMVGIRLSWPSSVVPSTDSFESSS
Sbjct: 1   MGLSSLPAPSEGVLNVILVNTALSISLFKCIVRLILHMVGIRLSWPSSVVPSTDSFESSS 60

Query: 61  ELGDPIFGSSWNYLDMFRNRYPRIRFDKVQSSERREHDCSVCLTQFEPESVINHLSCGHL 120
           ELGDPIFGSSWNYLDMFRNRYPRIRFDKVQSSERREHDCSVCLTQFEPESVINHLSCGHL
Sbjct: 61  ELGDPIFGSSWNYLDMFRNRYPRIRFDKVQSSERREHDCSVCLTQFEPESVINHLSCGHL 120

Query: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFCFQPP 159
           FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFCFQPP
Sbjct: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFCFQPP 158

[Close]
BLAST of MELO3C024182.2 vs. NCBI nr
Match: XP_008462032.1 (PREDICTED: probable E3 ubiquitin-protein ligase XERICO isoform X2 [Cucumis melo])

HSP 1 Score: 310.8 bits (795), Expect = 2.6e-81
Identity = 147/158 (93.04%), Postives = 152/158 (96.20%), Query Frame = 0 

Query: 1   MGLSSLPAPSEGVLNVILVNTALSISLFKCIVRLILHMVGIRLSWPSSVVPSTDSFESSS 60
           MGLSSLPAPSEGVLNVILVNTALSIS+ KCIVRLILHMVGIRLSWPSSVV STDSFE+SS
Sbjct: 1   MGLSSLPAPSEGVLNVILVNTALSISMLKCIVRLILHMVGIRLSWPSSVVSSTDSFENSS 60

Query: 61  ELGDPIFGSSWNYLDMFRNRYPRIRFDKVQSSERREHDCSVCLTQFEPESVINHLSCGHL 120
           ELGD  FGSSWNYL+MFRNRYPRIRFDKV+SS+ REHDCSVCLTQFEPES INHLSCGHL
Sbjct: 61  ELGDSNFGSSWNYLEMFRNRYPRIRFDKVKSSDCREHDCSVCLTQFEPESAINHLSCGHL 120

Query: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFCFQPP 159
           FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFCFQPP
Sbjct: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFCFQPP 158

[Close]
BLAST of MELO3C024182.2 vs. NCBI nr
Match: XP_011658651.1 (PREDICTED: probable E3 ubiquitin-protein ligase XERICO isoform X1 [Cucumis sativus])

HSP 1 Score: 309.3 bits (791), Expect = 7.5e-81
Identity = 146/158 (92.41%), Postives = 150/158 (94.94%), Query Frame = 0 

Query: 1   MGLSSLPAPSEGVLNVILVNTALSISLFKCIVRLILHMVGIRLSWPSSVVPSTDSFESSS 60
           MGLSSLPAPSEGVLNVILVNTALSIS+ KC VRLILHMVGIRLSWPS+VVPS DSFESSS
Sbjct: 1   MGLSSLPAPSEGVLNVILVNTALSISMLKCFVRLILHMVGIRLSWPSTVVPSPDSFESSS 60

Query: 61  ELGDPIFGSSWNYLDMFRNRYPRIRFDKVQSSERREHDCSVCLTQFEPESVINHLSCGHL 120
           ELGDP FGSSWNYL+MFRNRYPRIRFDKVQSS  REHDCSVCLTQFEPES INHLSCGHL
Sbjct: 61  ELGDPNFGSSWNYLEMFRNRYPRIRFDKVQSSGCREHDCSVCLTQFEPESAINHLSCGHL 120

Query: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFCFQPP 159
           FHT+CLEKWLDYWNITCPLCRTPLMSEE KSCFCFQPP
Sbjct: 121 FHTDCLEKWLDYWNITCPLCRTPLMSEEGKSCFCFQPP 158

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BLAST of MELO3C024182.2 vs. NCBI nr
Match: XP_008462031.1 (PREDICTED: probable E3 ubiquitin-protein ligase XERICO isoform X1 [Cucumis melo])

HSP 1 Score: 298.1 bits (762), Expect = 1.7e-77
Identity = 142/153 (92.81%), Postives = 147/153 (96.08%), Query Frame = 0 

Query: 1   MGLSSLPAPSEGVLNVILVNTALSISLFKCIVRLILHMVGIRLSWPSSVVPSTDSFESSS 60
           MGLSSLPAPSEGVLNVILVNTALSIS+ KCIVRLILHMVGIRLSWPSSVV STDSFE+SS
Sbjct: 1   MGLSSLPAPSEGVLNVILVNTALSISMLKCIVRLILHMVGIRLSWPSSVVSSTDSFENSS 60

Query: 61  ELGDPIFGSSWNYLDMFRNRYPRIRFDKVQSSERREHDCSVCLTQFEPESVINHLSCGHL 120
           ELGD  FGSSWNYL+MFRNRYPRIRFDKV+SS+ REHDCSVCLTQFEPES INHLSCGHL
Sbjct: 61  ELGDSNFGSSWNYLEMFRNRYPRIRFDKVKSSDCREHDCSVCLTQFEPESAINHLSCGHL 120

Query: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCF 154
           FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCF
Sbjct: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCF 153

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BLAST of MELO3C024182.2 vs. NCBI nr
Match: XP_016902815.1 (PREDICTED: probable E3 ubiquitin-protein ligase XERICO isoform X3 [Cucumis melo])

HSP 1 Score: 298.1 bits (762), Expect = 1.7e-77
Identity = 142/153 (92.81%), Postives = 147/153 (96.08%), Query Frame = 0 

Query: 1   MGLSSLPAPSEGVLNVILVNTALSISLFKCIVRLILHMVGIRLSWPSSVVPSTDSFESSS 60
           MGLSSLPAPSEGVLNVILVNTALSIS+ KCIVRLILHMVGIRLSWPSSVV STDSFE+SS
Sbjct: 1   MGLSSLPAPSEGVLNVILVNTALSISMLKCIVRLILHMVGIRLSWPSSVVSSTDSFENSS 60

Query: 61  ELGDPIFGSSWNYLDMFRNRYPRIRFDKVQSSERREHDCSVCLTQFEPESVINHLSCGHL 120
           ELGD  FGSSWNYL+MFRNRYPRIRFDKV+SS+ REHDCSVCLTQFEPES INHLSCGHL
Sbjct: 61  ELGDSNFGSSWNYLEMFRNRYPRIRFDKVKSSDCREHDCSVCLTQFEPESAINHLSCGHL 120

Query: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCF 154
           FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCF
Sbjct: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCF 153

[Close]
BLAST of MELO3C024182.2 vs. TAIR10
Match: AT2G04240.1 (RING/U-box superfamily protein)

HSP 1 Score: 147.1 bits (370), Expect = 9.0e-36
Identity = 82/150 (54.67%), Postives = 102/150 (68.00%), Query Frame = 0 

Query: 1   MGLSSLPAPSEGVLNVILVNTALSISLFKCIVRLILHMVGIRLSWPS----SVVPSTDSF 60
           MGLSSLP PSEG+L VILVNTALSIS+ K IVR  L +VGI LS PS             
Sbjct: 1   MGLSSLPGPSEGMLCVILVNTALSISIVKGIVRSFLGIVGISLS-PSXXXXXXXXXXXXX 60

Query: 61  ESSSELGDPIFGSSWNYLDMFRNRYPRIRFDKV-QSSERREHDCSVCLTQFEPESVINHL 120
              SE  D       +YL+ FRNR P +RF+ + +  ++ +++CSVCL++F+ +S IN L
Sbjct: 61  XXXSESFDFRVCQPESYLEEFRNRTPTLRFESLCRCKKQADNECSVCLSKFQGDSEINKL 120

Query: 121 SCGHLFHTECLEKWLDYWNITCPLCRTPLM 146
            CGHLFH  CLEKW+DYWNITCPLCRTPL+
Sbjct: 121 KCGHLFHKTCLEKWIDYWNITCPLCRTPLV 149

[Close]
BLAST of MELO3C024182.2 vs. TAIR10
Match: AT3G61460.1 (brassinosteroid-responsive RING-H2)

HSP 1 Score: 71.2 bits (173), Expect = 6.3e-13
Identity = 33/80 (41.25%), Postives = 50/80 (62.50%), Query Frame = 0 

Query: 76  MFRNRYPRIRFDKV-QSSERREHDCSVCLTQFEPESVINHL-SCGHLFHTECLEKWLDYW 135
           + R   P I+F+++  S E    +C+VCL +FE E  I  L +C H+FH  CL++W+D+ 
Sbjct: 70  LIREILPVIKFEELTNSGEDLPENCAVCLYEFEGEQEIRWLRNCRHIFHRSCLDRWMDHD 129

Query: 136 NITCPLCRTPLMSEEEKSCF 154
             TCPLCRTP + +E +  F
Sbjct: 130 QKTCPLCRTPFVPDEMQEEF 149

[Close]
BLAST of MELO3C024182.2 vs. TAIR10
Match: AT1G67856.1 (RING/U-box superfamily protein)

HSP 1 Score: 68.9 bits (167), Expect = 3.1e-12
Identity = 46/145 (31.72%), Postives = 69/145 (47.59%), Query Frame = 0 

Query: 1   MGLSSLPAPSEGVLNVILVNTALSISLFKCIVRLILHMVGIRLSWPSSVVPSTDSFESSS 60
           MG+S  P  SEGV+ ++++NT +S+SL K +VR +++                       
Sbjct: 1   MGISHYPTASEGVMPMLVMNTVVSVSLVKNMVRSVVNXXXXXXXXXXXXXXXXXXXXXKR 60

Query: 61  ELGDPIFGSSWNYLDMFRNRYPRIRFDKVQSSERREHDCSVCLTQFEPESVINHL-SCGH 120
                I     ++  +  NR  R        +ER   DC VCL  F+ E  ++ L SC H
Sbjct: 61  RRRISI----THFESLCENRGSR--------NEREAMDCCVCLCGFKEEEEVSELVSCKH 120

Query: 121 LFHTECLEKWLDYWNITCPLCRTPL 145
            FH+ CL+KW    + TCPLCR+ L
Sbjct: 121 YFHSACLDKWFGNNHTTCPLCRSIL 133

[Close]
BLAST of MELO3C024182.2 vs. TAIR10
Match: AT3G60220.1 (TOXICOS EN LEVADURA 4)

HSP 1 Score: 64.7 bits (156), Expect = 5.9e-11
Identity = 32/70 (45.71%), Postives = 43/70 (61.43%), Query Frame = 0 

Query: 82  PRIRFDKV--QSSERREHDCSVCLTQFEPESVINHLS-CGHLFHTECLEKWLDYWNITCP 141
           P  +F  V  +SS     DC+VCL++FEPE  +  L  C H FH +C++ WL   N TCP
Sbjct: 98  PIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWL-VSNQTCP 157

Query: 142 LCRTPLMSEE 149
           LCR+PL + E
Sbjct: 158 LCRSPLFASE 166

[Close]
BLAST of MELO3C024182.2 vs. TAIR10
Match: AT1G15100.1 (RING-H2 finger A2A)

HSP 1 Score: 64.3 bits (155), Expect = 7.7e-11
Identity = 24/51 (47.06%), Postives = 35/51 (68.63%), Query Frame = 0 

Query: 98  DCSVCLTQFEPESVINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLMSEE 149
           DC VCL++ +    +  L C H+FH +CLE WL  +N TCPLCR+ L+S++
Sbjct: 85  DCVVCLSKLKEGEEVRKLECRHVFHKKCLEGWLHQFNFTCPLCRSALVSDD 135

[Close]
BLAST of MELO3C024182.2 vs. Swiss-Prot
Match: sp|Q9SI09|XERIC_ARATH (Probable E3 ubiquitin-protein ligase XERICO OS=Arabidopsis thaliana OX=3702 GN=XERICO PE=1 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.6e-34
Identity = 82/150 (54.67%), Postives = 102/150 (68.00%), Query Frame = 0 

Query: 1   MGLSSLPAPSEGVLNVILVNTALSISLFKCIVRLILHMVGIRLSWPS----SVVPSTDSF 60
           MGLSSLP PSEG+L VILVNTALSIS+ K IVR  L +VGI LS PS             
Sbjct: 1   MGLSSLPGPSEGMLCVILVNTALSISIVKGIVRSFLGIVGISLS-PSXXXXXXXXXXXXX 60

Query: 61  ESSSELGDPIFGSSWNYLDMFRNRYPRIRFDKV-QSSERREHDCSVCLTQFEPESVINHL 120
              SE  D       +YL+ FRNR P +RF+ + +  ++ +++CSVCL++F+ +S IN L
Sbjct: 61  XXXSESFDFRVCQPESYLEEFRNRTPTLRFESLCRCKKQADNECSVCLSKFQGDSEINKL 120

Query: 121 SCGHLFHTECLEKWLDYWNITCPLCRTPLM 146
            CGHLFH  CLEKW+DYWNITCPLCRTPL+
Sbjct: 121 KCGHLFHKTCLEKWIDYWNITCPLCRTPLV 149

[Close]
BLAST of MELO3C024182.2 vs. Swiss-Prot
Match: sp|Q9LY41|ATL4_ARATH (E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana OX=3702 GN=ATL4 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.1e-09
Identity = 32/70 (45.71%), Postives = 43/70 (61.43%), Query Frame = 0 

Query: 82  PRIRFDKV--QSSERREHDCSVCLTQFEPESVINHLS-CGHLFHTECLEKWLDYWNITCP 141
           P  +F  V  +SS     DC+VCL++FEPE  +  L  C H FH +C++ WL   N TCP
Sbjct: 98  PIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWL-VSNQTCP 157

Query: 142 LCRTPLMSEE 149
           LCR+PL + E
Sbjct: 158 LCRSPLFASE 166

[Close]
BLAST of MELO3C024182.2 vs. Swiss-Prot
Match: sp|Q9ZT50|RHA2A_ARATH (E3 ubiquitin-protein ligase RHA2A OS=Arabidopsis thaliana OX=3702 GN=RHA2A PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.4e-09
Identity = 24/51 (47.06%), Postives = 35/51 (68.63%), Query Frame = 0 

Query: 98  DCSVCLTQFEPESVINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLMSEE 149
           DC VCL++ +    +  L C H+FH +CLE WL  +N TCPLCR+ L+S++
Sbjct: 85  DCVVCLSKLKEGEEVRKLECRHVFHKKCLEGWLHQFNFTCPLCRSALVSDD 135

[Close]
BLAST of MELO3C024182.2 vs. Swiss-Prot
Match: sp|Q9ZU51|RHA2B_ARATH (E3 ubiquitin-protein ligase RHA2B OS=Arabidopsis thaliana OX=3702 GN=RHA2B PE=1 SV=2)

HSP 1 Score: 63.9 bits (154), Expect = 1.8e-09
Identity = 24/54 (44.44%), Postives = 34/54 (62.96%), Query Frame = 0 

Query: 92  SERREHDCSVCLTQFEPESVINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLM 146
           S+    DC VCL++ +    +  L C H+FH +CLE WL + N  CPLCR+PL+
Sbjct: 67  SDNAASDCIVCLSKLKTGEEVRKLDCRHVFHKQCLEGWLQHLNFNCPLCRSPLL 120

[Close]
BLAST of MELO3C024182.2 vs. Swiss-Prot
Match: sp|Q9SUS5|RHA1B_ARATH (E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis thaliana OX=3702 GN=RHA1B PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.0e-08
Identity = 29/74 (39.19%), Postives = 43/74 (58.11%), Query Frame = 0 

Query: 82  PRIRFDKVQSSERREHDCSVCLTQFEPESVINHL-SCGHLFHTECLEKWL-DYWNITCPL 141
           P +RF  + +    E  C+VCL+ F  +  I  L  CGH+FH  CL++W+ D   ITCP+
Sbjct: 70  PVVRFSDLLTDP--EDCCTVCLSDFVSDDKIRQLPKCGHVFHHRCLDRWIVDCNKITCPI 129

Query: 142 CRTPLMSEEEKSCF 154
           CR   + EE+ + F
Sbjct: 130 CRNRFLPEEKSTPF 141

[Close]
BLAST of MELO3C024182.2 vs. TrEMBL
Match: tr|A0A1S3CFW8|A0A1S3CFW8_CUCME (probable E3 ubiquitin-protein ligase XERICO OS=Cucumis melo OX=3656 GN=LOC103500499 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 4.2e-88
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0 

Query: 1   MGLSSLPAPSEGVLNVILVNTALSISLFKCIVRLILHMVGIRLSWPSSVVPSTDSFESSS 60
           MGLSSLPAPSEGVLNVILVNTALSISLFKCIVRLILHMVGIRLSWPSSVVPSTDSFESSS
Sbjct: 1   MGLSSLPAPSEGVLNVILVNTALSISLFKCIVRLILHMVGIRLSWPSSVVPSTDSFESSS 60

Query: 61  ELGDPIFGSSWNYLDMFRNRYPRIRFDKVQSSERREHDCSVCLTQFEPESVINHLSCGHL 120
           ELGDPIFGSSWNYLDMFRNRYPRIRFDKVQSSERREHDCSVCLTQFEPESVINHLSCGHL
Sbjct: 61  ELGDPIFGSSWNYLDMFRNRYPRIRFDKVQSSERREHDCSVCLTQFEPESVINHLSCGHL 120

Query: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFCFQPP 159
           FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFCFQPP
Sbjct: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFCFQPP 158

[Close]
BLAST of MELO3C024182.2 vs. TrEMBL
Match: tr|A0A1S3CHG1|A0A1S3CHG1_CUCME (probable E3 ubiquitin-protein ligase XERICO isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500498 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 1.7e-81
Identity = 147/158 (93.04%), Postives = 152/158 (96.20%), Query Frame = 0 

Query: 1   MGLSSLPAPSEGVLNVILVNTALSISLFKCIVRLILHMVGIRLSWPSSVVPSTDSFESSS 60
           MGLSSLPAPSEGVLNVILVNTALSIS+ KCIVRLILHMVGIRLSWPSSVV STDSFE+SS
Sbjct: 1   MGLSSLPAPSEGVLNVILVNTALSISMLKCIVRLILHMVGIRLSWPSSVVSSTDSFENSS 60

Query: 61  ELGDPIFGSSWNYLDMFRNRYPRIRFDKVQSSERREHDCSVCLTQFEPESVINHLSCGHL 120
           ELGD  FGSSWNYL+MFRNRYPRIRFDKV+SS+ REHDCSVCLTQFEPES INHLSCGHL
Sbjct: 61  ELGDSNFGSSWNYLEMFRNRYPRIRFDKVKSSDCREHDCSVCLTQFEPESAINHLSCGHL 120

Query: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFCFQPP 159
           FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFCFQPP
Sbjct: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFCFQPP 158

[Close]
BLAST of MELO3C024182.2 vs. TrEMBL
Match: tr|A0A1S4E4A9|A0A1S4E4A9_CUCME (probable E3 ubiquitin-protein ligase XERICO isoform X3 OS=Cucumis melo OX=3656 GN=LOC103500498 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 1.1e-77
Identity = 142/153 (92.81%), Postives = 147/153 (96.08%), Query Frame = 0 

Query: 1   MGLSSLPAPSEGVLNVILVNTALSISLFKCIVRLILHMVGIRLSWPSSVVPSTDSFESSS 60
           MGLSSLPAPSEGVLNVILVNTALSIS+ KCIVRLILHMVGIRLSWPSSVV STDSFE+SS
Sbjct: 1   MGLSSLPAPSEGVLNVILVNTALSISMLKCIVRLILHMVGIRLSWPSSVVSSTDSFENSS 60

Query: 61  ELGDPIFGSSWNYLDMFRNRYPRIRFDKVQSSERREHDCSVCLTQFEPESVINHLSCGHL 120
           ELGD  FGSSWNYL+MFRNRYPRIRFDKV+SS+ REHDCSVCLTQFEPES INHLSCGHL
Sbjct: 61  ELGDSNFGSSWNYLEMFRNRYPRIRFDKVKSSDCREHDCSVCLTQFEPESAINHLSCGHL 120

Query: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCF 154
           FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCF
Sbjct: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCF 153

[Close]
BLAST of MELO3C024182.2 vs. TrEMBL
Match: tr|A0A1S3CGH9|A0A1S3CGH9_CUCME (probable E3 ubiquitin-protein ligase XERICO isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500498 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 1.1e-77
Identity = 142/153 (92.81%), Postives = 147/153 (96.08%), Query Frame = 0 

Query: 1   MGLSSLPAPSEGVLNVILVNTALSISLFKCIVRLILHMVGIRLSWPSSVVPSTDSFESSS 60
           MGLSSLPAPSEGVLNVILVNTALSIS+ KCIVRLILHMVGIRLSWPSSVV STDSFE+SS
Sbjct: 1   MGLSSLPAPSEGVLNVILVNTALSISMLKCIVRLILHMVGIRLSWPSSVVSSTDSFENSS 60

Query: 61  ELGDPIFGSSWNYLDMFRNRYPRIRFDKVQSSERREHDCSVCLTQFEPESVINHLSCGHL 120
           ELGD  FGSSWNYL+MFRNRYPRIRFDKV+SS+ REHDCSVCLTQFEPES INHLSCGHL
Sbjct: 61  ELGDSNFGSSWNYLEMFRNRYPRIRFDKVKSSDCREHDCSVCLTQFEPESAINHLSCGHL 120

Query: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCF 154
           FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCF
Sbjct: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCF 153

[Close]
BLAST of MELO3C024182.2 vs. TrEMBL
Match: tr|A0A0A0K534|A0A0A0K534_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G031580 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 3.3e-77
Identity = 141/153 (92.16%), Postives = 145/153 (94.77%), Query Frame = 0 

Query: 1   MGLSSLPAPSEGVLNVILVNTALSISLFKCIVRLILHMVGIRLSWPSSVVPSTDSFESSS 60
           MGLSSLPAPSEGVLNVILVNTALSIS+ KC VRLILHMVGIRLSWPS+VVPS DSFESSS
Sbjct: 1   MGLSSLPAPSEGVLNVILVNTALSISMLKCFVRLILHMVGIRLSWPSTVVPSPDSFESSS 60

Query: 61  ELGDPIFGSSWNYLDMFRNRYPRIRFDKVQSSERREHDCSVCLTQFEPESVINHLSCGHL 120
           ELGDP FGSSWNYL+MFRNRYPRIRFDKVQSS  REHDCSVCLTQFEPES INHLSCGHL
Sbjct: 61  ELGDPNFGSSWNYLEMFRNRYPRIRFDKVQSSGCREHDCSVCLTQFEPESAINHLSCGHL 120

Query: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCF 154
           FHT+CLEKWLDYWNITCPLCRTPLMSEE KSCF
Sbjct: 121 FHTDCLEKWLDYWNITCPLCRTPLMSEEGKSCF 153

The following BLAST results are available for this feature:
BLAST of MELO3C024182.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008462033.16.4e-88100.00PREDICTED: probable E3 ubiquitin-protein ligase XERICO [Cucumis melo][more]
XP_008462032.12.6e-8193.04PREDICTED: probable E3 ubiquitin-protein ligase XERICO isoform X2 [Cucumis melo][more]
XP_011658651.17.5e-8192.41PREDICTED: probable E3 ubiquitin-protein ligase XERICO isoform X1 [Cucumis sativ... [more]
XP_008462031.11.7e-7792.81PREDICTED: probable E3 ubiquitin-protein ligase XERICO isoform X1 [Cucumis melo][more]
XP_016902815.11.7e-7792.81PREDICTED: probable E3 ubiquitin-protein ligase XERICO isoform X3 [Cucumis melo][more]
BLAST of MELO3C024182.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G04240.19.0e-3654.67RING/U-box superfamily protein[more]
AT3G61460.16.3e-1341.25brassinosteroid-responsive RING-H2[more]
AT1G67856.13.1e-1231.72RING/U-box superfamily protein[more]
AT3G60220.15.9e-1145.71TOXICOS EN LEVADURA 4[more]
AT1G15100.17.7e-1147.06RING-H2 finger A2A[more]
BLAST of MELO3C024182.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SI09|XERIC_ARATH1.6e-3454.67Probable E3 ubiquitin-protein ligase XERICO OS=Arabidopsis thaliana OX=3702 GN=X... [more]
sp|Q9LY41|ATL4_ARATH1.1e-0945.71E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana OX=3702 GN=ATL4 PE=1 SV... [more]
sp|Q9ZT50|RHA2A_ARATH1.4e-0947.06E3 ubiquitin-protein ligase RHA2A OS=Arabidopsis thaliana OX=3702 GN=RHA2A PE=1 ... [more]
sp|Q9ZU51|RHA2B_ARATH1.8e-0944.44E3 ubiquitin-protein ligase RHA2B OS=Arabidopsis thaliana OX=3702 GN=RHA2B PE=1 ... [more]
sp|Q9SUS5|RHA1B_ARATH2.0e-0839.19E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis thaliana OX=3702 GN=RHA1B PE=2 ... [more]
BLAST of MELO3C024182.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CFW8|A0A1S3CFW8_CUCME4.2e-88100.00probable E3 ubiquitin-protein ligase XERICO OS=Cucumis melo OX=3656 GN=LOC103500... [more]
tr|A0A1S3CHG1|A0A1S3CHG1_CUCME1.7e-8193.04probable E3 ubiquitin-protein ligase XERICO isoform X2 OS=Cucumis melo OX=3656 G... [more]
tr|A0A1S4E4A9|A0A1S4E4A9_CUCME1.1e-7792.81probable E3 ubiquitin-protein ligase XERICO isoform X3 OS=Cucumis melo OX=3656 G... [more]
tr|A0A1S3CGH9|A0A1S3CGH9_CUCME1.1e-7792.81probable E3 ubiquitin-protein ligase XERICO isoform X1 OS=Cucumis melo OX=3656 G... [more]
tr|A0A0A0K534|A0A0A0K534_CUCSA3.3e-7792.16Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G031580 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C024182.2.1MELO3C024182.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 99..140
e-value: 1.8E-5
score: 34.2
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 98..141
e-value: 4.7E-11
score: 42.7
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 99..141
score: 13.035
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 73..147
e-value: 4.2E-18
score: 66.8
NoneNo IPR availablePANTHERPTHR14155:SF204E3 UBIQUITIN-PROTEIN LIGASE XERICO-RELATEDcoord: 1..145
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 1..145
NoneNo IPR availableSUPERFAMILYSSF57850RING/U-boxcoord: 91..146

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C024182.2Cucumber (Gy14) v2cgybmedB401
MELO3C024182.2Cucumber (Gy14) v2cgybmedB465
MELO3C024182.2Cucumber (Gy14) v1cgymedB119
MELO3C024182.2Cucumber (Gy14) v1cgymedB180
MELO3C024182.2Cucurbita maxima (Rimu)cmamedB102
MELO3C024182.2Cucurbita maxima (Rimu)cmamedB108
MELO3C024182.2Cucurbita maxima (Rimu)cmamedB534
MELO3C024182.2Cucurbita maxima (Rimu)cmamedB593
MELO3C024182.2Cucurbita moschata (Rifu)cmomedB093
MELO3C024182.2Cucurbita moschata (Rifu)cmomedB521
MELO3C024182.2Cucurbita pepo (Zucchini)cpemedB261
MELO3C024182.2Cucurbita pepo (Zucchini)cpemedB317
MELO3C024182.2Cucurbita pepo (Zucchini)cpemedB717
MELO3C024182.2Wild cucumber (PI 183967)cpimedB450
MELO3C024182.2Wild cucumber (PI 183967)cpimedB523
MELO3C024182.2Cucumber (Chinese Long) v2cumedB442
MELO3C024182.2Cucumber (Chinese Long) v2cumedB509
MELO3C024182.2Melon (DHL92) v3.6.1medmedB039
MELO3C024182.2Bottle gourd (USVL1VR-Ls)lsimedB067
MELO3C024182.2Bottle gourd (USVL1VR-Ls)lsimedB101
MELO3C024182.2Watermelon (Charleston Gray)medwcgB190
MELO3C024182.2Watermelon (97103) v1medwmB233
MELO3C024182.2Silver-seed gourdcarmedB0204
MELO3C024182.2Silver-seed gourdcarmedB1050
MELO3C024182.2Cucumber (Chinese Long) v3cucmedB459
MELO3C024182.2Cucumber (Chinese Long) v3cucmedB536
MELO3C024182.2Watermelon (97103) v2medwmbB164
MELO3C024182.2Wax gourdmedwgoB212
MELO3C024182.2Wax gourdmedwgoB236