MELO3C024097 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C024097
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionU-box domain-containing protein 4
Locationchr1 : 9020732 .. 9021690 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCATTCTCATCCTTCTTCTCTTCTTCTTCACCATCTTTGCCTTCGTTATCACCAACAAAGTCGCTGGAAAAGTTCTCTTGAACAGAGGATATAAAGAGTATAGACTCGGTGATTACTCCAACTGGCTACAGAATCGCGTCAAGAACAACAAAGATTGGAACAGAATCAGAAATTGTTTAGTCGACAGCAAGGTGTGTGCCGAATTCAACCAAAAAATCGCTTCTGAAACCATTGCGCAATGCTACCAAGAACAGTTATCTTCAATTCAGGTACGATTTAATTCCAATTCAAAATTTAAGTAAACCACCCCATAAATAATTTCATAAGTAACGAGAGTTTGTGTGTGAATTTTTTTTATAGTTTGGGTGTTGCAAACCGGAAGATGAGTGTAATTTCACGTACAAGGCATTGACTCAGTGGGAAAAATCGGCGAATGTTTCAAGTTTTTCGAATCCGAATTGTGGTTTGTGGGATAATAGACTTGAAAAGCTGTGCTTCGATTGTGAATCCTGCAAAGGTGGAGTGTTGGATAATTTGAAAAGGAACCGGAAGGTACTAGTTTAGCAGAGAAGGTGATGGTGGTTCTGAGTAGCCAGGCTGGGATTCAAGAGGGAAAGGATGCGATTGTGGAAGAGGGTGGAATTGCTGCGCTTGTAGAAGCAATTGAAGATGGGTCGGTGAAAGGGAAAGAATTTGCAGTGTTGACACTCTTGCAATTGTGTGTTGAGAGTGTGAGAAATCGAGGGTTGCTCGTCAACGAAGGTGGAATTTCCCCTTTAGTTGCACTTTCTCAGACTGGAAGCGTTCGAGCAAAGCATAAGGTGATTATCAGAAACTGATTAGTCGTTAATTATTACACGATTTTTTTTTTGTTAGCTAATTCTATGAAATGAACACCTTGATGAAAAATTGTTAATTTTTGCAGGTAGAAACGCTTCTGGGGTATCTAAGATAA

mRNA sequence

ATGTTCATTCTCATCCTTCTTCTCTTCTTCTTCACCATCTTTGCCTTCGTTATCACCAACAAAGTCGCTGGAAAAGTTCTCTTGAACAGAGGATATAAAGAGTATAGACTCGGTGATTACTCCAACTGGCTACAGAATCGCGTCAAGAACAACAAAGATTGGAACAGAATCAGAAATTGTTTAGTCGACAGCAAGGTGTGTGCCGAATTCAACCAAAAAATCGCTTCTGAAACCATTGCGCAATGCTACCAAGAACAGTTATCTTCAATTCAGTTTGGGTGTTGCAAACCGGAAGATGAGTGTAATTTCACGTACAAGGCATTGACTCAGTGGGAAAAATCGGCGAATGTTTCAAGTTTTTCGAATCCGAATTGTGGTTTGTGGGATAATAGACTTGAAAAGCTGTGCTTCGATTGTGAATCCTGCAAAGGTGGAGTGTTGGATAATTTGAAAAGGAACCGGAAGGCTGGGATTCAAGAGGGAAAGGATGCGATTGTGGAAGAGGGTGGAATTGCTGCGCTTGTAGAAGCAATTGAAGATGGGTCGGTGAAAGGGAAAGAATTTGCAGTGTTGACACTCTTGCAATTGTGTGTTGAGAGTGTGAGAAATCGAGGGTTGCTCGTCAACGAAGGTGGAATTTCCCCTTTAGTTGCACTTTCTCAGACTGGAAGCGTTCGAGCAAAGCATAAGGTAGAAACGCTTCTGGGGTATCTAAGATAA

Coding sequence (CDS)

ATGTTCATTCTCATCCTTCTTCTCTTCTTCTTCACCATCTTTGCCTTCGTTATCACCAACAAAGTCGCTGGAAAAGTTCTCTTGAACAGAGGATATAAAGAGTATAGACTCGGTGATTACTCCAACTGGCTACAGAATCGCGTCAAGAACAACAAAGATTGGAACAGAATCAGAAATTGTTTAGTCGACAGCAAGGTGTGTGCCGAATTCAACCAAAAAATCGCTTCTGAAACCATTGCGCAATGCTACCAAGAACAGTTATCTTCAATTCAGTTTGGGTGTTGCAAACCGGAAGATGAGTGTAATTTCACGTACAAGGCATTGACTCAGTGGGAAAAATCGGCGAATGTTTCAAGTTTTTCGAATCCGAATTGTGGTTTGTGGGATAATAGACTTGAAAAGCTGTGCTTCGATTGTGAATCCTGCAAAGGTGGAGTGTTGGATAATTTGAAAAGGAACCGGAAGGCTGGGATTCAAGAGGGAAAGGATGCGATTGTGGAAGAGGGTGGAATTGCTGCGCTTGTAGAAGCAATTGAAGATGGGTCGGTGAAAGGGAAAGAATTTGCAGTGTTGACACTCTTGCAATTGTGTGTTGAGAGTGTGAGAAATCGAGGGTTGCTCGTCAACGAAGGTGGAATTTCCCCTTTAGTTGCACTTTCTCAGACTGGAAGCGTTCGAGCAAAGCATAAGGTAGAAACGCTTCTGGGGTATCTAAGATAA

Protein sequence

MFILILLLFFFTIFAFVITNKVAGKVLLNRGYKEYRLGDYSNWLQNRVKNNKDWNRIRNCLVDSKVCAEFNQKIASETIAQCYQEQLSSIQFGCCKPEDECNFTYKALTQWEKSANVSSFSNPNCGLWDNRLEKLCFDCESCKGGVLDNLKRNRKAGIQEGKDAIVEEGGIAALVEAIEDGSVKGKEFAVLTLLQLCVESVRNRGLLVNEGGISPLVALSQTGSVRAKHKVETLLGYLR*
Homology
[Close]
BLAST of MELO3C024097 vs. Swiss-Prot
Match: TET8_ARATH (Tetraspanin-8 OS=Arabidopsis thaliana GN=TET8 PE=2 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 2.3e-48
Identity = 84/151 (55.63%), Postives = 110/151 (72.85%), Query Frame = 1 

Query: 1   MFILILLLFFFTIFAFVITNKVAGKVLLNRGYKEYRLGDYSNWLQNRVKNNKDWNRIRNC 60
           MF+LILL+F  T+FAFV+TNK AG+ +  +GYKEY+LGDYS WLQ RV+N K+WN+IR+C
Sbjct: 79  MFLLILLVFCITVFAFVVTNKGAGEAIEGKGYKEYKLGDYSTWLQKRVENGKNWNKIRSC 138

Query: 61  LVDSKVCAEFNQKIASETIAQCYQEQLSSIQFGCCKPEDECNFTYKALTQWEKSANVSSF 120
           LV+SKVC++   K  +  +   Y+E L+++Q GCCKP DEC F Y   T W K+    + 
Sbjct: 139 LVESKVCSKLEAKFVNVPVNSFYKEHLTALQSGCCKPSDECGFEYVNPTTWTKN-TTGTH 198

Query: 121 SNPNCGLWDNRLEKLCFDCESCKGGVLDNLK 152
           +NP+C  WDN  EKLCFDC+SCK G+LDN+K
Sbjct: 199 TNPDCQTWDNAKEKLCFDCQSCKAGLLDNVK 228

[Close]
BLAST of MELO3C024097 vs. Swiss-Prot
Match: TET7_ARATH (Tetraspanin-7 OS=Arabidopsis thaliana GN=TET7 PE=2 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.2e-44
Identity = 80/155 (51.61%), Postives = 108/155 (69.68%), Query Frame = 1 

Query: 1   MFILILLLFFFTIFAFVITNKVAGKVLLNRGYKEYRLGDYSNWLQNRVKNNKDWNRIRNC 60
           MF+LILL F FTIFAF +TN+ AG+V+ +RGYKEY + DYSNWLQ RV N K+W RIR+C
Sbjct: 79  MFLLILLGFCFTIFAFAVTNRGAGEVISDRGYKEYHVADYSNWLQKRVNNAKNWERIRSC 138

Query: 61  LVDSKVCAEFNQKIASETIAQCYQEQLSSIQFGCCKPEDECNFTYKALTQWEKSANVSSF 120
           L+ S VC+ +  + AS  +   Y+  L+++Q GCCKP ++CNFTY   T W K+     +
Sbjct: 139 LMYSDVCSTYRTRYASINVEDFYKSNLNALQSGCCKPSNDCNFTYVNPTTWTKTP--GPY 198

Query: 121 SNPNCGLWDNRLEKLCFDCESCKGGVLDNLKRNRK 156
            N +C +WDN+   LC+DCE+CK G+LDN+K + K
Sbjct: 199 KNEDCNVWDNKPGTLCYDCEACKAGLLDNIKNSWK 231

[Close]
BLAST of MELO3C024097 vs. Swiss-Prot
Match: TET9_ARATH (Tetraspanin-9 OS=Arabidopsis thaliana GN=TET9 PE=2 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.0e-40
Identity = 74/151 (49.01%), Postives = 101/151 (66.89%), Query Frame = 1 

Query: 1   MFILILLLFFFTIFAFVITNKVAGKVLLNRGYKEYRLGDYSNWLQNRVKNNKDWNRIRNC 60
           MF LIL++  FTIFAFV+T+K +G+ +  + YKEYRL  YS+WLQ RV N K WN IR+C
Sbjct: 79  MFFLILIVLCFTIFAFVVTSKGSGETIQGKAYKEYRLEAYSDWLQRRVNNAKHWNSIRSC 138

Query: 61  LVDSKVCAEFNQKIASETIAQCYQEQLSSIQFGCCKPEDECNFTYKALTQWEKSANVSSF 120
           L +SK C       A+ T++  Y+E L++ + GCCKP ++C+FTY   T W K++   + 
Sbjct: 139 LYESKFCYNLELVTANHTVSDFYKEDLTAFESGCCKPSNDCDFTYITSTTWNKTS--GTH 198

Query: 121 SNPNCGLWDNRLEKLCFDCESCKGGVLDNLK 152
            N +C LWDN   KLC++C++CK G LDNLK
Sbjct: 199 KNSDCQLWDNEKHKLCYNCKACKAGFLDNLK 227

[Close]
BLAST of MELO3C024097 vs. Swiss-Prot
Match: TET4_ARATH (Tetraspanin-4 OS=Arabidopsis thaliana GN=TET4 PE=3 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 7.3e-31
Identity = 67/161 (41.61%), Postives = 94/161 (58.39%), Query Frame = 1 

Query: 1   MFILILLLFFFTIFAFVITNKVAGKVLLNRGYKEYRLGDYSNWLQNRVKNNKDWNRIRNC 60
           MF +I  L  FTIFA+V+T+K +G+ ++NR Y +Y L DYS WL++RV +N  W  I +C
Sbjct: 79  MFFVIAALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDYSGWLKDRVTDNGYWRDIGSC 138

Query: 61  LVDSKVCAEFNQKI--ASETIAQCYQEQLSSIQFGCCKPEDECNFTYKALTQWEKSANVS 120
           + DS VC +  + +    ET    Y   LS ++ GCCKP  +C +TY   T W     + 
Sbjct: 139 VRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVESGCCKPPTDCGYTYVNETVWIPGGEMV 198

Query: 121 SFSNPNCGLWDNRLEKLCFDCESCKGGVLDNLKRN-RKAGI 159
              NP+C LW+N    LC+ C SCK GVL +LK++ RK  +
Sbjct: 199 G-PNPDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSV 238

[Close]
BLAST of MELO3C024097 vs. Swiss-Prot
Match: TET11_ARATH (Tetraspanin-11 OS=Arabidopsis thaliana GN=TET11 PE=2 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.1e-29
Identity = 65/149 (43.62%), Postives = 89/149 (59.73%), Query Frame = 1 

Query: 5   ILLLFFFTIFAFVITNKVAGKVLLNRGYKEYRLGDYSNWLQNRVKNNKDWNRIRNCLVDS 64
           I+ L  F+IF F +TNK AG+V+  RGYKEYR  D+S WL   V   K W  IR+CL ++
Sbjct: 84  IVALMIFSIFLFFVTNKGAGRVVSGRGYKEYRTVDFSTWLNGFV-GGKRWVGIRSCLAEA 143

Query: 65  KVCAEFNQKIASETIAQCYQEQLSSIQFGCCKPEDECNFTYKALTQW-EKSANVSSFS-N 124
            VC + +    S+     Y + LS IQ GCCKP  +CNF ++  T W   S N ++ + N
Sbjct: 144 NVCDDLSDGRVSQIADAFYHKNLSPIQSGCCKPPSDCNFEFRNATFWIPPSKNETAVAEN 203

Query: 125 PNCGLWDNRLEKLCFDCESCKGGVLDNLK 152
            +CG W N   +LCF+C +CK GVL N++
Sbjct: 204 GDCGTWSNVQTELCFNCNACKAGVLANIR 231

[Close]
BLAST of MELO3C024097 vs. TrEMBL
Match: A0A0A0LTZ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G287020 PE=3 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 2.9e-66
Identity = 120/155 (77.42%), Postives = 130/155 (83.87%), Query Frame = 1 

Query: 1   MFILILLLFFFTIFAFVITNKVAGKVLLNRGYKEYRLGDYSNWLQNRVKNNKDWNRIRNC 60
           MF+LILLLF FTIFAF +TNK AGKVL NRGYKEYRLGDYSNWLQNRV+NNKDWNRIR+C
Sbjct: 79  MFLLILLLFVFTIFAFAVTNKGAGKVLSNRGYKEYRLGDYSNWLQNRVRNNKDWNRIRSC 138

Query: 61  LVDSKVCAEFNQKIASETIAQCYQEQLSSIQFGCCKPEDECNFTYKALTQWEKSANVSSF 120
           LVD KVC E +QK   ET+ Q Y E LSSIQ GCCKP DEC F YK   QW+K ANVSSF
Sbjct: 139 LVDGKVCNEVSQKFVGETVEQFYLEHLSSIQSGCCKPADECKFEYKGPIQWDKPANVSSF 198

Query: 121 SNPNCGLWDNRLEKLCFDCESCKGGVLDNLKRNRK 156
           +NP+CGLWDN  +KLCFDCESCKGGVLDNLKRN K
Sbjct: 199 ANPDCGLWDNDPQKLCFDCESCKGGVLDNLKRNWK 233

[Close]
BLAST of MELO3C024097 vs. TrEMBL
Match: M5XYQ2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010029mg PE=3 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 2.0e-51
Identity = 92/155 (59.35%), Postives = 120/155 (77.42%), Query Frame = 1 

Query: 1   MFILILLLFFFTIFAFVITNKVAGKVLLNRGYKEYRLGDYSNWLQNRVKNNKDWNRIRNC 60
           MF+LI++LF FTIFAF +TNK AGKVL ++GYKEYRLGDYSNWLQ RV + K+WN+I++C
Sbjct: 78  MFLLIVVLFAFTIFAFAVTNKGAGKVLSDKGYKEYRLGDYSNWLQKRVSSTKNWNKIKSC 137

Query: 61  LVDSKVCAEFNQKIASETIAQCYQEQLSSIQFGCCKPEDECNFTYKALTQWEKSANVSSF 120
           L+DSKVC+ F  K  ++TI++ Y+E LS++Q GCCKP D+C FTY + T W  + N SS 
Sbjct: 138 LIDSKVCSTFQDKYVNDTISELYKENLSALQAGCCKPSDDCGFTYVSPTNWNNNGNTSS- 197

Query: 121 SNPNCGLWDNRLEKLCFDCESCKGGVLDNLKRNRK 156
           SNP+C  W N    LCF+C+SCK G+LDN+K N K
Sbjct: 198 SNPDCNTWANDARVLCFNCQSCKAGLLDNIKSNWK 231

[Close]
BLAST of MELO3C024097 vs. TrEMBL
Match: W9RK30_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023007 PE=3 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 2.6e-51
Identity = 93/155 (60.00%), Postives = 119/155 (76.77%), Query Frame = 1 

Query: 1   MFILILLLFFFTIFAFVITNKVAGKVLLNRGYKEYRLGDYSNWLQNRVKNNKDWNRIRNC 60
           MF LI++LF FTIF FV+TNK AGK L  +GYKEY+LGDYSNWLQ RV NNK+WN+I++C
Sbjct: 79  MFFLIVILFSFTIFTFVVTNKGAGKALSGKGYKEYKLGDYSNWLQKRVNNNKNWNKIKSC 138

Query: 61  LVDSKVCAEFNQKIASETIAQCYQEQLSSIQFGCCKPEDECNFTYKALTQWEKSANVSSF 120
           L+D KVC+EF+Q+   +T+ + Y E L++IQ GCCKP DECNFTY + T+W  + + SS 
Sbjct: 139 LIDGKVCSEFHQEYIRDTVNELYSEHLTAIQSGCCKPSDECNFTYVSPTEWTTANSTSSI 198

Query: 121 SNPNCGLWDNRLEKLCFDCESCKGGVLDNLKRNRK 156
             P+CG W N  + LCF+C+SCK GVLDNLK N K
Sbjct: 199 --PDCGAWGNDPKVLCFNCQSCKAGVLDNLKSNWK 231

[Close]
BLAST of MELO3C024097 vs. TrEMBL
Match: B9IM71_POPTR (Senescence-associated family protein OS=Populus trichocarpa GN=POPTR_0018s10880g PE=4 SV=2)

HSP 1 Score: 208.8 bits (530), Expect = 7.5e-51
Identity = 91/155 (58.71%), Postives = 121/155 (78.06%), Query Frame = 1 

Query: 1   MFILILLLFFFTIFAFVITNKVAGKVLLNRGYKEYRLGDYSNWLQNRVKNNKDWNRIRNC 60
           MF+LI+LLF FTIFAFV+TNK AG+VL  +GYKEY+LGDYSNWLQ RV N K+W +I++C
Sbjct: 79  MFLLIVLLFCFTIFAFVVTNKGAGQVLSGKGYKEYKLGDYSNWLQKRVGNQKNWRKIKSC 138

Query: 61  LVDSKVCAEFNQKIASETIAQCYQEQLSSIQFGCCKPEDECNFTYKALTQWEKSANVSSF 120
           L+D+KVC++FNQK A++T+   Y   LS++Q GCCKP D C F YK+   WEK+   +S 
Sbjct: 139 LIDAKVCSDFNQKFANDTVEVLYTRHLSALQAGCCKPSDSCGFLYKSPINWEKTP-TNST 198

Query: 121 SNPNCGLWDNRLEKLCFDCESCKGGVLDNLKRNRK 156
           S+P+C  WDN+ + LCF+C SCK G+LDNL+R+ K
Sbjct: 199 SDPDCNAWDNQTDVLCFNCNSCKAGLLDNLRRDWK 232

[Close]
BLAST of MELO3C024097 vs. TrEMBL
Match: A0A0B2RSL4_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_032938 PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.3e-50
Identity = 93/155 (60.00%), Postives = 115/155 (74.19%), Query Frame = 1 

Query: 1   MFILILLLFFFTIFAFVITNKVAGKVLLNRGYKEYRLGDYSNWLQNRVKNNKDWNRIRNC 60
           MF+LI+LLF FTIFAFV+TNK AG+V+ NRGYKEYRLGDYSNWLQ RV N K WNRIR+C
Sbjct: 79  MFVLIVLLFAFTIFAFVVTNKGAGEVVSNRGYKEYRLGDYSNWLQKRVNNTKTWNRIRSC 138

Query: 61  LVDSKVCAEFNQKIASETIAQCYQEQLSSIQFGCCKPEDECNFTYKALTQWEKSANVSSF 120
           L   KVC EF  K  ++T+ + Y E LS++Q GCCKP +EC F+Y   T W K  NV++ 
Sbjct: 139 LQSGKVCTEFQSKFLNDTVTEFYSENLSALQSGCCKPAEECQFSYVNPTTWTKPTNVTNQ 198

Query: 121 SNPNCGLWDNRLEKLCFDCESCKGGVLDNLKRNRK 156
           SNP+C  W+N    LCF+C+SCK G+L NLK + K
Sbjct: 199 SNPDCDAWNNDPTVLCFNCQSCKAGLLQNLKTDWK 233

[Close]
BLAST of MELO3C024097 vs. TAIR10
Match: AT2G23810.1 (AT2G23810.1 tetraspanin8)

HSP 1 Score: 193.7 bits (491), Expect = 1.3e-49
Identity = 84/151 (55.63%), Postives = 110/151 (72.85%), Query Frame = 1 

Query: 1   MFILILLLFFFTIFAFVITNKVAGKVLLNRGYKEYRLGDYSNWLQNRVKNNKDWNRIRNC 60
           MF+LILL+F  T+FAFV+TNK AG+ +  +GYKEY+LGDYS WLQ RV+N K+WN+IR+C
Sbjct: 79  MFLLILLVFCITVFAFVVTNKGAGEAIEGKGYKEYKLGDYSTWLQKRVENGKNWNKIRSC 138

Query: 61  LVDSKVCAEFNQKIASETIAQCYQEQLSSIQFGCCKPEDECNFTYKALTQWEKSANVSSF 120
           LV+SKVC++   K  +  +   Y+E L+++Q GCCKP DEC F Y   T W K+    + 
Sbjct: 139 LVESKVCSKLEAKFVNVPVNSFYKEHLTALQSGCCKPSDECGFEYVNPTTWTKN-TTGTH 198

Query: 121 SNPNCGLWDNRLEKLCFDCESCKGGVLDNLK 152
           +NP+C  WDN  EKLCFDC+SCK G+LDN+K
Sbjct: 199 TNPDCQTWDNAKEKLCFDCQSCKAGLLDNVK 228

[Close]
BLAST of MELO3C024097 vs. TAIR10
Match: AT4G28050.1 (AT4G28050.1 tetraspanin7)

HSP 1 Score: 181.4 bits (459), Expect = 6.5e-46
Identity = 80/155 (51.61%), Postives = 108/155 (69.68%), Query Frame = 1 

Query: 1   MFILILLLFFFTIFAFVITNKVAGKVLLNRGYKEYRLGDYSNWLQNRVKNNKDWNRIRNC 60
           MF+LILL F FTIFAF +TN+ AG+V+ +RGYKEY + DYSNWLQ RV N K+W RIR+C
Sbjct: 79  MFLLILLGFCFTIFAFAVTNRGAGEVISDRGYKEYHVADYSNWLQKRVNNAKNWERIRSC 138

Query: 61  LVDSKVCAEFNQKIASETIAQCYQEQLSSIQFGCCKPEDECNFTYKALTQWEKSANVSSF 120
           L+ S VC+ +  + AS  +   Y+  L+++Q GCCKP ++CNFTY   T W K+     +
Sbjct: 139 LMYSDVCSTYRTRYASINVEDFYKSNLNALQSGCCKPSNDCNFTYVNPTTWTKTP--GPY 198

Query: 121 SNPNCGLWDNRLEKLCFDCESCKGGVLDNLKRNRK 156
            N +C +WDN+   LC+DCE+CK G+LDN+K + K
Sbjct: 199 KNEDCNVWDNKPGTLCYDCEACKAGLLDNIKNSWK 231

[Close]
BLAST of MELO3C024097 vs. TAIR10
Match: AT4G30430.1 (AT4G30430.1 tetraspanin9)

HSP 1 Score: 168.3 bits (425), Expect = 5.7e-42
Identity = 74/151 (49.01%), Postives = 101/151 (66.89%), Query Frame = 1 

Query: 1   MFILILLLFFFTIFAFVITNKVAGKVLLNRGYKEYRLGDYSNWLQNRVKNNKDWNRIRNC 60
           MF LIL++  FTIFAFV+T+K +G+ +  + YKEYRL  YS+WLQ RV N K WN IR+C
Sbjct: 79  MFFLILIVLCFTIFAFVVTSKGSGETIQGKAYKEYRLEAYSDWLQRRVNNAKHWNSIRSC 138

Query: 61  LVDSKVCAEFNQKIASETIAQCYQEQLSSIQFGCCKPEDECNFTYKALTQWEKSANVSSF 120
           L +SK C       A+ T++  Y+E L++ + GCCKP ++C+FTY   T W K++   + 
Sbjct: 139 LYESKFCYNLELVTANHTVSDFYKEDLTAFESGCCKPSNDCDFTYITSTTWNKTS--GTH 198

Query: 121 SNPNCGLWDNRLEKLCFDCESCKGGVLDNLK 152
            N +C LWDN   KLC++C++CK G LDNLK
Sbjct: 199 KNSDCQLWDNEKHKLCYNCKACKAGFLDNLK 227

[Close]
BLAST of MELO3C024097 vs. TAIR10
Match: AT5G60220.1 (AT5G60220.1 tetraspanin4)

HSP 1 Score: 135.6 bits (340), Expect = 4.1e-32
Identity = 67/161 (41.61%), Postives = 94/161 (58.39%), Query Frame = 1 

Query: 1   MFILILLLFFFTIFAFVITNKVAGKVLLNRGYKEYRLGDYSNWLQNRVKNNKDWNRIRNC 60
           MF +I  L  FTIFA+V+T+K +G+ ++NR Y +Y L DYS WL++RV +N  W  I +C
Sbjct: 79  MFFVIAALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDYSGWLKDRVTDNGYWRDIGSC 138

Query: 61  LVDSKVCAEFNQKI--ASETIAQCYQEQLSSIQFGCCKPEDECNFTYKALTQWEKSANVS 120
           + DS VC +  + +    ET    Y   LS ++ GCCKP  +C +TY   T W     + 
Sbjct: 139 VRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVESGCCKPPTDCGYTYVNETVWIPGGEMV 198

Query: 121 SFSNPNCGLWDNRLEKLCFDCESCKGGVLDNLKRN-RKAGI 159
              NP+C LW+N    LC+ C SCK GVL +LK++ RK  +
Sbjct: 199 G-PNPDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSV 238

[Close]
BLAST of MELO3C024097 vs. TAIR10
Match: AT1G18520.1 (AT1G18520.1 tetraspanin11)

HSP 1 Score: 131.7 bits (330), Expect = 5.9e-31
Identity = 65/149 (43.62%), Postives = 89/149 (59.73%), Query Frame = 1 

Query: 5   ILLLFFFTIFAFVITNKVAGKVLLNRGYKEYRLGDYSNWLQNRVKNNKDWNRIRNCLVDS 64
           I+ L  F+IF F +TNK AG+V+  RGYKEYR  D+S WL   V   K W  IR+CL ++
Sbjct: 84  IVALMIFSIFLFFVTNKGAGRVVSGRGYKEYRTVDFSTWLNGFV-GGKRWVGIRSCLAEA 143

Query: 65  KVCAEFNQKIASETIAQCYQEQLSSIQFGCCKPEDECNFTYKALTQW-EKSANVSSFS-N 124
            VC + +    S+     Y + LS IQ GCCKP  +CNF ++  T W   S N ++ + N
Sbjct: 144 NVCDDLSDGRVSQIADAFYHKNLSPIQSGCCKPPSDCNFEFRNATFWIPPSKNETAVAEN 203

Query: 125 PNCGLWDNRLEKLCFDCESCKGGVLDNLK 152
            +CG W N   +LCF+C +CK GVL N++
Sbjct: 204 GDCGTWSNVQTELCFNCNACKAGVLANIR 231

[Close]
BLAST of MELO3C024097 vs. NCBI nr
Match: gi|659124065|ref|XP_008461972.1| (PREDICTED: tetraspanin-8-like, partial [Cucumis melo])

HSP 1 Score: 330.1 bits (845), Expect = 3.2e-87
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 1 

Query: 1   MFILILLLFFFTIFAFVITNKVAGKVLLNRGYKEYRLGDYSNWLQNRVKNNKDWNRIRNC 60
           MFILILLLFFFTIFAFVITNKVAGKVLLNRGYKEYRLGDYSNWLQNRVKNNKDWNRIRNC
Sbjct: 1   MFILILLLFFFTIFAFVITNKVAGKVLLNRGYKEYRLGDYSNWLQNRVKNNKDWNRIRNC 60

Query: 61  LVDSKVCAEFNQKIASETIAQCYQEQLSSIQFGCCKPEDECNFTYKALTQWEKSANVSSF 120
           LVDSKVCAEFNQKIASETIAQCYQEQLSSIQFGCCKPEDECNFTYKALTQWEKSANVSSF
Sbjct: 61  LVDSKVCAEFNQKIASETIAQCYQEQLSSIQFGCCKPEDECNFTYKALTQWEKSANVSSF 120

Query: 121 SNPNCGLWDNRLEKLCFDCESCKGGVLDNLKRNRK 156
           SNPNCGLWDNRLEKLCFDCESCKGGVLDNLKRNRK
Sbjct: 121 SNPNCGLWDNRLEKLCFDCESCKGGVLDNLKRNRK 155

[Close]
BLAST of MELO3C024097 vs. NCBI nr
Match: gi|659086205|ref|XP_008443811.1| (PREDICTED: tetraspanin-8-like [Cucumis melo])

HSP 1 Score: 282.3 bits (721), Expect = 7.7e-73
Identity = 131/155 (84.52%), Postives = 138/155 (89.03%), Query Frame = 1 

Query: 1   MFILILLLFFFTIFAFVITNKVAGKVLLNRGYKEYRLGDYSNWLQNRVKNNKDWNRIRNC 60
           MF+LILLLF FTIFAF +TNK AGKVL NRGYKEYRLGDYSNWLQNRV+NNKDWNRIR+C
Sbjct: 79  MFLLILLLFVFTIFAFAVTNKGAGKVLSNRGYKEYRLGDYSNWLQNRVRNNKDWNRIRSC 138

Query: 61  LVDSKVCAEFNQKIASETIAQCYQEQLSSIQFGCCKPEDECNFTYKALTQWEKSANVSSF 120
           LVD KVCAEFNQ  ASET+ Q YQE LSSIQ GCCKP DECNFTYK  TQW+K ANVSSF
Sbjct: 139 LVDGKVCAEFNQTFASETVEQFYQEHLSSIQSGCCKPADECNFTYKTPTQWDKPANVSSF 198

Query: 121 SNPNCGLWDNRLEKLCFDCESCKGGVLDNLKRNRK 156
           SNP+CGLWDNR EKLCFDCESCKGGVLDNLKRN K
Sbjct: 199 SNPDCGLWDNRPEKLCFDCESCKGGVLDNLKRNWK 233

[Close]
BLAST of MELO3C024097 vs. NCBI nr
Match: gi|449466889|ref|XP_004151158.1| (PREDICTED: tetraspanin-8-like [Cucumis sativus])

HSP 1 Score: 260.0 bits (663), Expect = 4.1e-66
Identity = 120/155 (77.42%), Postives = 130/155 (83.87%), Query Frame = 1 

Query: 1   MFILILLLFFFTIFAFVITNKVAGKVLLNRGYKEYRLGDYSNWLQNRVKNNKDWNRIRNC 60
           MF+LILLLF FTIFAF +TNK AGKVL NRGYKEYRLGDYSNWLQNRV+NNKDWNRIR+C
Sbjct: 79  MFLLILLLFVFTIFAFAVTNKGAGKVLSNRGYKEYRLGDYSNWLQNRVRNNKDWNRIRSC 138

Query: 61  LVDSKVCAEFNQKIASETIAQCYQEQLSSIQFGCCKPEDECNFTYKALTQWEKSANVSSF 120
           LVD KVC E +QK   ET+ Q Y E LSSIQ GCCKP DEC F YK   QW+K ANVSSF
Sbjct: 139 LVDGKVCNEVSQKFVGETVEQFYLEHLSSIQSGCCKPADECKFEYKGPIQWDKPANVSSF 198

Query: 121 SNPNCGLWDNRLEKLCFDCESCKGGVLDNLKRNRK 156
           +NP+CGLWDN  +KLCFDCESCKGGVLDNLKRN K
Sbjct: 199 ANPDCGLWDNDPQKLCFDCESCKGGVLDNLKRNWK 233

[Close]
BLAST of MELO3C024097 vs. NCBI nr
Match: gi|1009108597|ref|XP_015885487.1| (PREDICTED: tetraspanin-8-like [Ziziphus jujuba])

HSP 1 Score: 223.0 bits (567), Expect = 5.5e-55
Identity = 99/155 (63.87%), Postives = 125/155 (80.65%), Query Frame = 1 

Query: 1   MFILILLLFFFTIFAFVITNKVAGKVLLNRGYKEYRLGDYSNWLQNRVKNNKDWNRIRNC 60
           MF+LI++LF FTIFAFV+TNK AGKVL +RGYKEYRLGDYSNWLQNRV N K+WN+I++C
Sbjct: 78  MFLLIVILFAFTIFAFVVTNKGAGKVLSDRGYKEYRLGDYSNWLQNRVNNTKNWNKIKSC 137

Query: 61  LVDSKVCAEFNQKIASETIAQCYQEQLSSIQFGCCKPEDECNFTYKALTQWEKSANVSSF 120
           L+DSKVC+ F  K  ++T+ Q Y E LS++Q GCCKP DEC FTY   T+W K+AN S+ 
Sbjct: 138 LIDSKVCSSFEDKYVNDTVQQFYTENLSALQSGCCKPSDECGFTYVKPTEWTKTAN-STT 197

Query: 121 SNPNCGLWDNRLEKLCFDCESCKGGVLDNLKRNRK 156
           +NP+C LW N L+ LCF+C+SCK G+LDNLK + K
Sbjct: 198 ANPDCDLWGNELKTLCFNCQSCKAGLLDNLKNDWK 231

[Close]
BLAST of MELO3C024097 vs. NCBI nr
Match: gi|729463563|ref|XP_010525757.1| (PREDICTED: tetraspanin-8 [Tarenaya hassleriana])

HSP 1 Score: 215.3 bits (547), Expect = 1.2e-52
Identity = 93/151 (61.59%), Postives = 119/151 (78.81%), Query Frame = 1 

Query: 1   MFILILLLFFFTIFAFVITNKVAGKVLLNRGYKEYRLGDYSNWLQNRVKNNKDWNRIRNC 60
           MF+LILL+F FT+FAFV+TNK AG+ L NRGYKEYRLGDYSNWLQ RV + K+WN+IR+C
Sbjct: 79  MFVLILLVFCFTVFAFVVTNKGAGETLANRGYKEYRLGDYSNWLQKRVNSGKNWNKIRSC 138

Query: 61  LVDSKVCAEFNQKIASETIAQCYQEQLSSIQFGCCKPEDECNFTYKALTQWEKSANVSSF 120
           LVDSKVC++F  K   E +   Y+E LS++Q GCCKP ++C FTY + T W ++    + 
Sbjct: 139 LVDSKVCSKFESKFVGEAVDDFYKEHLSALQSGCCKPSNDCGFTYVSPTNWTRTG--GTH 198

Query: 121 SNPNCGLWDNRLEKLCFDCESCKGGVLDNLK 152
           SNP+C LWDNR +KLCFDC+SCK G+LDN+K
Sbjct: 199 SNPDCALWDNRSDKLCFDCQSCKAGLLDNIK 227

The following BLAST results are available for this feature:
BLAST of MELO3C024097 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TET8_ARATH2.3e-4855.63Tetraspanin-8 OS=Arabidopsis thaliana GN=TET8 PE=2 SV=1[more]
TET7_ARATH1.2e-4451.61Tetraspanin-7 OS=Arabidopsis thaliana GN=TET7 PE=2 SV=1[more]
TET9_ARATH1.0e-4049.01Tetraspanin-9 OS=Arabidopsis thaliana GN=TET9 PE=2 SV=1[more]
TET4_ARATH7.3e-3141.61Tetraspanin-4 OS=Arabidopsis thaliana GN=TET4 PE=3 SV=1[more]
TET11_ARATH1.1e-2943.62Tetraspanin-11 OS=Arabidopsis thaliana GN=TET11 PE=2 SV=1[more]
BLAST of MELO3C024097 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LTZ1_CUCSA2.9e-6677.42Uncharacterized protein OS=Cucumis sativus GN=Csa_1G287020 PE=3 SV=1[more]
M5XYQ2_PRUPE2.0e-5159.35Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010029mg PE=3 SV=1[more]
W9RK30_9ROSA2.6e-5160.00Uncharacterized protein OS=Morus notabilis GN=L484_023007 PE=3 SV=1[more]
B9IM71_POPTR7.5e-5158.71Senescence-associated family protein OS=Populus trichocarpa GN=POPTR_0018s10880g... [more]
A0A0B2RSL4_GLYSO1.3e-5060.00Uncharacterized protein OS=Glycine soja GN=glysoja_032938 PE=3 SV=1[more]
BLAST of MELO3C024097 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G23810.11.3e-4955.63 tetraspanin8[more]
AT4G28050.16.5e-4651.61 tetraspanin7[more]
AT4G30430.15.7e-4249.01 tetraspanin9[more]
AT5G60220.14.1e-3241.61 tetraspanin4[more]
AT1G18520.15.9e-3143.62 tetraspanin11[more]
BLAST of MELO3C024097 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659124065|ref|XP_008461972.1|3.2e-87100.00PREDICTED: tetraspanin-8-like, partial [Cucumis melo][more]
gi|659086205|ref|XP_008443811.1|7.7e-7384.52PREDICTED: tetraspanin-8-like [Cucumis melo][more]
gi|449466889|ref|XP_004151158.1|4.1e-6677.42PREDICTED: tetraspanin-8-like [Cucumis sativus][more]
gi|1009108597|ref|XP_015885487.1|5.5e-5563.87PREDICTED: tetraspanin-8-like [Ziziphus jujuba][more]
gi|729463563|ref|XP_010525757.1|1.2e-5261.59PREDICTED: tetraspanin-8 [Tarenaya hassleriana][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold
IPR018499Tetraspanin/Peripherin
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005488 binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C024097T1MELO3C024097T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3DG3DSA:1.25.10.10coord: 159..235
score: 1.9
IPR016024Armadillo-type foldunknownSSF48371ARM repeatcoord: 158..238
score: 2.73
IPR018499Tetraspanin/PeripherinPFAMPF00335Tetraspannincoord: 1..154
score: 4.1
NoneNo IPR availablePANTHERPTHR32191FAMILY NOT NAMEDcoord: 1..153
score: 1.1
NoneNo IPR availablePANTHERPTHR32191:SF2TETRASPANIN-11-RELATEDcoord: 1..153
score: 1.1

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C024097Wax gourdmewgoB258
MELO3C024097Cucumber (Gy14) v1cgymeB085
MELO3C024097Cucurbita maxima (Rimu)cmameB017
MELO3C024097Cucurbita maxima (Rimu)cmameB019
MELO3C024097Cucurbita maxima (Rimu)cmameB396
MELO3C024097Cucurbita moschata (Rifu)cmomeB006
MELO3C024097Cucurbita moschata (Rifu)cmomeB008
MELO3C024097Cucurbita moschata (Rifu)cmomeB387
MELO3C024097Wild cucumber (PI 183967)cpimeB528
MELO3C024097Cucumber (Chinese Long) v2cumeB525
MELO3C024097Watermelon (Charleston Gray)mewcgB181
MELO3C024097Watermelon (97103) v1mewmB204
MELO3C024097Cucurbita pepo (Zucchini)cpemeB505
MELO3C024097Cucurbita pepo (Zucchini)cpemeB714
MELO3C024097Bottle gourd (USVL1VR-Ls)lsimeB189
MELO3C024097Cucumber (Gy14) v2cgybmeB460
MELO3C024097Cucumber (Chinese Long) v3cucmeB540
MELO3C024097Watermelon (97103) v2mewmbB230