MELO3C024077.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C024077.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr01 : 8707007 .. 8707974 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCATCAATCAGTGGATCGATTGCTCATAGAGAGTCATCATCTATGATACCACGCATCATGTGGTGGAGTTGCACACACCCACCTGAGTTGAAGGTGATTAAGTCCCAAATCTTCGGGTCAAAAATGGTACGTCACGATTTATCTTCTTCCTCCATACATTCACTATAGTATTTTAGGATTTAGTCTCTTAATTAGCACCTATTGTTGTTCCATTTTCAGGCCCATATACATGAGATTGAACCTATGGATGATAAGCGCGCTTACCTTGATCGGAGTCTTGAAATTCCTATGATGGAAGGTTACAAGGAATACTTACATGACTCTCTTCCTCATCACTTCGAGGATGCCCTGCCACGTACTCATGTCAATAATTTCCCTCTTCCTTCTTACATAGACCATCCCTCTTGTCCTACTCATTACATGGACCATCCCTCTCCTTCTCCTCACTTTAATCATCACCTCCTCCTCCTGTTCAGCATCCCCAGGTGACGTATGATTGTAGCCAGCATGTACATCACCTAGAAGGGAGATTAGATTAGATGGAGGACTTCTTACAATGAATAAAGTCATTCGTGTCGTTCACGTCAACTGAGTTATCAGCCATAAAGAGGCTTCTAATGGCATTGGTTAAGGTATTATTATTATTCACGTGGAACACTTTATTGTTTTTTTCTTAGTTAAGTATTAGTCGTCACTTATGTTTTCTACTGCTTTCTTAATAGGGTAAGAGATTTGGCTCCCAACCATGCTACAACAGTGGTGAAGGTACGCCATTCAATGCACTGGAGGCTCAGACTTTTGTTGGTGGCACATTCGTGGATGTTTCCGCTCCGGACATTGATGACCAACCCATTGATGAGAAGACGAGAACATTCATCAGCGACGACCCTGAGATGGTATCATACTCATTGAAATACCATTTGAGGGTAAGGATATGCCACCACCACCTTTCCAACCCATGTTAG

mRNA sequence

ATGTCATCAATCAGTGGATCGATTGCTCATAGAGAGTCATCATCTATGATACCACGCATCATGTGGTGGAGTTGCACACACCCACCTGAGTTGAAGGTGATTAAGTCCCAAATCTTCGGGTCAAAAATGGCCCATATACATGAGATTGAACCTATGGATGATAAGCGCGCTTACCTTGATCGGAGTCTTGAAATTCCTATGATGGAAGGTTACAAGGAATACTTACATGACTCTCTTCCTCATCACTTCGAGGATGCCCTGCCACGTACTCATGGTAAGAGATTTGGCTCCCAACCATGCTACAACAGTGGTGAAGGTACGCCATTCAATGCACTGGAGGCTCAGACTTTTGTTGGTGGCACATTCGTGGATGTTTCCGCTCCGGACATTGATGACCAACCCATTGATGAGAAGACGAGAACATTCATCAGCGACGACCCTGAGATGGTATCATACTCATTGAAATACCATTTGAGGGTAAGGATATGCCACCACCACCTTTCCAACCCATGTTAG

Coding sequence (CDS)

ATGTCATCAATCAGTGGATCGATTGCTCATAGAGAGTCATCATCTATGATACCACGCATCATGTGGTGGAGTTGCACACACCCACCTGAGTTGAAGGTGATTAAGTCCCAAATCTTCGGGTCAAAAATGGCCCATATACATGAGATTGAACCTATGGATGATAAGCGCGCTTACCTTGATCGGAGTCTTGAAATTCCTATGATGGAAGGTTACAAGGAATACTTACATGACTCTCTTCCTCATCACTTCGAGGATGCCCTGCCACGTACTCATGGTAAGAGATTTGGCTCCCAACCATGCTACAACAGTGGTGAAGGTACGCCATTCAATGCACTGGAGGCTCAGACTTTTGTTGGTGGCACATTCGTGGATGTTTCCGCTCCGGACATTGATGACCAACCCATTGATGAGAAGACGAGAACATTCATCAGCGACGACCCTGAGATGGTATCATACTCATTGAAATACCATTTGAGGGTAAGGATATGCCACCACCACCTTTCCAACCCATGTTAG

Protein sequence

MSSISGSIAHRESSSMIPRIMWWSCTHPPELKVIKSQIFGSKMAHIHEIEPMDDKRAYLDRSLEIPMMEGYKEYLHDSLPHHFEDALPRTHGKRFGSQPCYNSGEGTPFNALEAQTFVGGTFVDVSAPDIDDQPIDEKTRTFISDDPEMVSYSLKYHLRVRICHHHLSNPC
Homology
[Close]
BLAST of MELO3C024077.2 vs. NCBI nr
Match: KGN66861.1 (hypothetical protein Csa_1G701370 [Cucumis sativus])

HSP 1 Score: 73.6 bits (179), Expect = 7.5e-10
Identity = 52/150 (34.67%), Postives = 63/150 (42.00%), Query Frame = 0 

Query: 43  MAHIHEIEPMDDKRAYLDRSLEIPMMEGYKEYLHDSLPHHFEDALPRTH----------- 102
           MA I EI+P  D+ AYLDRSLEI   E Y E       H+ + AL  T+           
Sbjct: 1   MALIKEIDPTYDEHAYLDRSLEISRAESYVEGPPALTSHYVKYALAYTYVDLPLLLLMFT 60

Query: 103 -----------------------------------GKRFGSQPCYNSGEGTPFNALEAQT 147
                                               K   SQ CY  GEG  FNA E + 
Sbjct: 61  IFLLETTMNEFLDRMQSSFTAKLSAINELLMVLVKDKAVDSQQCYGGGEGLSFNASEVEN 120

[Close]
BLAST of MELO3C024077.2 vs. NCBI nr
Match: KGN49555.1 (hypothetical protein Csa_5G001020 [Cucumis sativus])

HSP 1 Score: 70.9 bits (172), Expect = 4.9e-09
Identity = 61/196 (31.12%), Postives = 83/196 (42.35%), Query Frame = 0 

Query: 3   SISGSIAHRESSSMIPRIMWWSCTHPPELKVIKSQIFGSKMA------------------ 62
           SISG +A+RE+SS IP IM  SCTH P LK    ++    M+                  
Sbjct: 66  SISGWVAYRETSSAIPCIMQLSCTHLPGLKARIHELNLQMMSVLTLIRLSSSTLQNSPPP 125

Query: 63  -HIH-------------------EIEPMDDKRAYLDRSLEIPMMEGYKEYLHDSLPHHFE 122
            H++                     EP   +++    +  I   +G  + + DSL     
Sbjct: 126 PHVNHPSXXXLTQHPWVTCDCSQHSEPNSTQQSLKPTTNHI---KGRLDRMEDSLXXXXS 185

Query: 123 D------------ALPRTHGKRFGSQPCYNSGEGTPFNALEAQTFVGGTFVDVSAPDIDD 149
                         L     K   SQP Y  GEG  FN LE+QT VG  FVDV    IDD
Sbjct: 186 SMLFVLVKLSIIRELLMVLVKVVDSQPYYGGGEGLSFNTLESQTLVGDAFVDVFTSTIDD 245

[Close]
BLAST of MELO3C024077.2 vs. NCBI nr
Match: XP_008450207.1 (PREDICTED: uncharacterized protein LOC103491868 [Cucumis melo])

HSP 1 Score: 61.6 bits (148), Expect = 3.0e-06
Identity = 31/57 (54.39%), Postives = 36/57 (63.16%), Query Frame = 0 

Query: 92  GKRFGSQPCYNSGEGTPFNALEAQTFVGGTFVDVSAPDIDDQPIDEKTRTFISDDPE 149
           GK   SQ CY  GEGT FNA +    V   FVD SAP ID+Q I+E+  T IS+DPE
Sbjct: 47  GKAVDSQQCYGGGEGTSFNASKVGNLVDDVFVDFSAPIIDNQTINEEMGTSISEDPE 103

[Close]
BLAST of MELO3C024077.2 vs. NCBI nr
Match: KGN44191.1 (hypothetical protein Csa_7G219270 [Cucumis sativus])

HSP 1 Score: 60.8 bits (146), Expect = 5.0e-06
Identity = 34/75 (45.33%), Postives = 44/75 (58.67%), Query Frame = 0 

Query: 1  MSSISGSIAHRESSSMIPRIMWWSCTHPPELKVIKSQIFGSKMAHIHEIEPMDDKRAYLD 60
          MSSIS  +A+R S  +IPRIM WSCT+   LK+            +  IEP  ++ AYLD
Sbjct: 1  MSSISERVANRASHDVIPRIMQWSCTYSLGLKIC-----------MQAIEPTHEELAYLD 60

Query: 61 RSLEIPMMEGYKEYL 76
            L+IP  EGYK+ L
Sbjct: 61 TGLDIPSTEGYKDNL 64

[Close]
BLAST of MELO3C024077.2 vs. TrEMBL
Match: tr|A0A0A0M3R6|A0A0A0M3R6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G701370 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 5.0e-10
Identity = 52/150 (34.67%), Postives = 63/150 (42.00%), Query Frame = 0 

Query: 43  MAHIHEIEPMDDKRAYLDRSLEIPMMEGYKEYLHDSLPHHFEDALPRTH----------- 102
           MA I EI+P  D+ AYLDRSLEI   E Y E       H+ + AL  T+           
Sbjct: 1   MALIKEIDPTYDEHAYLDRSLEISRAESYVEGPPALTSHYVKYALAYTYVDLPLLLLMFT 60

Query: 103 -----------------------------------GKRFGSQPCYNSGEGTPFNALEAQT 147
                                               K   SQ CY  GEG  FNA E + 
Sbjct: 61  IFLLETTMNEFLDRMQSSFTAKLSAINELLMVLVKDKAVDSQQCYGGGEGLSFNASEVEN 120

[Close]
BLAST of MELO3C024077.2 vs. TrEMBL
Match: tr|A0A0A0KIM1|A0A0A0KIM1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G001020 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 3.2e-09
Identity = 61/196 (31.12%), Postives = 83/196 (42.35%), Query Frame = 0 

Query: 3   SISGSIAHRESSSMIPRIMWWSCTHPPELKVIKSQIFGSKMA------------------ 62
           SISG +A+RE+SS IP IM  SCTH P LK    ++    M+                  
Sbjct: 66  SISGWVAYRETSSAIPCIMQLSCTHLPGLKARIHELNLQMMSVLTLIRLSSSTLQNSPPP 125

Query: 63  -HIH-------------------EIEPMDDKRAYLDRSLEIPMMEGYKEYLHDSLPHHFE 122
            H++                     EP   +++    +  I   +G  + + DSL     
Sbjct: 126 PHVNHPSXXXLTQHPWVTCDCSQHSEPNSTQQSLKPTTNHI---KGRLDRMEDSLXXXXS 185

Query: 123 D------------ALPRTHGKRFGSQPCYNSGEGTPFNALEAQTFVGGTFVDVSAPDIDD 149
                         L     K   SQP Y  GEG  FN LE+QT VG  FVDV    IDD
Sbjct: 186 SMLFVLVKLSIIRELLMVLVKVVDSQPYYGGGEGLSFNTLESQTLVGDAFVDVFTSTIDD 245

[Close]
BLAST of MELO3C024077.2 vs. TrEMBL
Match: tr|A0A1S3BN49|A0A1S3BN49_CUCME (uncharacterized protein LOC103491868 OS=Cucumis melo OX=3656 GN=LOC103491868 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 2.0e-06
Identity = 31/57 (54.39%), Postives = 36/57 (63.16%), Query Frame = 0 

Query: 92  GKRFGSQPCYNSGEGTPFNALEAQTFVGGTFVDVSAPDIDDQPIDEKTRTFISDDPE 149
           GK   SQ CY  GEGT FNA +    V   FVD SAP ID+Q I+E+  T IS+DPE
Sbjct: 47  GKAVDSQQCYGGGEGTSFNASKVGNLVDDVFVDFSAPIIDNQTINEEMGTSISEDPE 103

[Close]
BLAST of MELO3C024077.2 vs. TrEMBL
Match: tr|A0A0A0K8S4|A0A0A0K8S4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G219270 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.3e-06
Identity = 34/75 (45.33%), Postives = 44/75 (58.67%), Query Frame = 0 

Query: 1  MSSISGSIAHRESSSMIPRIMWWSCTHPPELKVIKSQIFGSKMAHIHEIEPMDDKRAYLD 60
          MSSIS  +A+R S  +IPRIM WSCT+   LK+            +  IEP  ++ AYLD
Sbjct: 1  MSSISERVANRASHDVIPRIMQWSCTYSLGLKIC-----------MQAIEPTHEELAYLD 60

Query: 61 RSLEIPMMEGYKEYL 76
            L+IP  EGYK+ L
Sbjct: 61 TGLDIPSTEGYKDNL 64

The following BLAST results are available for this feature:
BLAST of MELO3C024077.2 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN66861.17.5e-1034.67hypothetical protein Csa_1G701370 [Cucumis sativus][more]
KGN49555.14.9e-0931.12hypothetical protein Csa_5G001020 [Cucumis sativus][more]
XP_008450207.13.0e-0654.39PREDICTED: uncharacterized protein LOC103491868 [Cucumis melo][more]
KGN44191.15.0e-0645.33hypothetical protein Csa_7G219270 [Cucumis sativus][more]
BLAST of MELO3C024077.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C024077.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C024077.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0M3R6|A0A0A0M3R6_CUCSA5.0e-1034.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G701370 PE=4 SV=1[more]
tr|A0A0A0KIM1|A0A0A0KIM1_CUCSA3.2e-0931.12Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G001020 PE=4 SV=1[more]
tr|A0A1S3BN49|A0A1S3BN49_CUCME2.0e-0654.39uncharacterized protein LOC103491868 OS=Cucumis melo OX=3656 GN=LOC103491868 PE=... [more]
tr|A0A0A0K8S4|A0A0A0K8S4_CUCSA3.3e-0645.33Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G219270 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C024077.2.1MELO3C024077.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C024077.2Cucumber (Gy14) v2cgybmedB458
MELO3C024077.2Cucumber (Gy14) v1cgymedB083
MELO3C024077.2Cucurbita maxima (Rimu)cmamedB456
MELO3C024077.2Cucurbita moschata (Rifu)cmomedB444
MELO3C024077.2Cucurbita pepo (Zucchini)cpemedB597
MELO3C024077.2Cucurbita pepo (Zucchini)cpemedB848
MELO3C024077.2Wild cucumber (PI 183967)cpimedB514
MELO3C024077.2Cucumber (Chinese Long) v2cumedB503
MELO3C024077.2Bottle gourd (USVL1VR-Ls)lsimedB198
MELO3C024077.2Watermelon (Charleston Gray)medwcgB176
MELO3C024077.2Silver-seed gourdcarmedB0288
MELO3C024077.2Cucumber (Chinese Long) v3cucmedB529
MELO3C024077.2Watermelon (97103) v2medwmbB216
MELO3C024077.2Wax gourdmedwgoB259