MELO3C023981.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C023981.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr04 : 24039976 .. 24040149 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTTTAATTCAGAAACAGAGCATCCATGGAAGGGAGGATTTTATGTTTGCTGCCGCTGTTGCCTCCGAGTCACAATGGCGAAGCCAGAACCGGGATCTCCAGAGGCAAAGAAGATCTATTCCCCTGTTTGTGACCATGCCAACTGCCAAGATCTGTCTCAACCAGAGTAG

mRNA sequence

ATGGCTTTTAATTCAGAAACAGAGCATCCATGGAAGGGAGGATTTTATGTTTGCTGCCGCTGTTGCCTCCGAGTCACAATGGCGAAGCCAGAACCGGGATCTCCAGAGGCAAAGAAGATCTATTCCCCTGTTTGTGACCATGCCAACTGCCAAGATCTGTCTCAACCAGAGTAG

Coding sequence (CDS)

ATGGCTTTTAATTCAGAAACAGAGCATCCATGGAAGGGAGGATTTTATGTTTGCTGCCGCTGTTGCCTCCGAGTCACAATGGCGAAGCCAGAACCGGGATCTCCAGAGGCAAAGAAGATCTATTCCCCTGTTTGTGACCATGCCAACTGCCAAGATCTGTCTCAACCAGAGTAG

Protein sequence

MAFNSETEHPWKGGFYVCCRCCLRVTMAKPEPGSPEAKKIYSPVCDHANCQDLSQPE
Homology
[Close]
BLAST of MELO3C023981.2 vs. NCBI nr
Match: KGN58586.1 (hypothetical protein Csa_3G690830 [Cucumis sativus])

HSP 1 Score: 59.3 bits (142), Expect = 4.9e-06
Identity = 28/34 (82.35%), Postives = 29/34 (85.29%), Query Frame = 0 

Query: 25 VTMAKPEPGSPEAKKIYSPVC-DHANCQDLSQPE 58
          V +AKPE GSPEA KIYS VC DHANCQDLSQPE
Sbjct: 16 VAVAKPETGSPEANKIYSTVCGDHANCQDLSQPE 49

[Close]
BLAST of MELO3C023981.2 vs. TrEMBL
Match: tr|A0A0A0LEU7|A0A0A0LEU7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G690830 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.2e-06
Identity = 28/34 (82.35%), Postives = 29/34 (85.29%), Query Frame = 0 

Query: 25 VTMAKPEPGSPEAKKIYSPVC-DHANCQDLSQPE 58
          V +AKPE GSPEA KIYS VC DHANCQDLSQPE
Sbjct: 16 VAVAKPETGSPEANKIYSTVCGDHANCQDLSQPE 49

The following BLAST results are available for this feature:
BLAST of MELO3C023981.2 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN58586.14.9e-0682.35hypothetical protein Csa_3G690830 [Cucumis sativus][more]
BLAST of MELO3C023981.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C023981.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C023981.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LEU7|A0A0A0LEU7_CUCSA3.2e-0682.35Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G690830 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C023981.2.1MELO3C023981.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C023981.2CsaV3_3G032110Cucumber (Chinese Long) v3cucmedB198
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C023981.2Cucumber (Chinese Long) v3cucmedB556
MELO3C023981.2Watermelon (97103) v2medwmbB305
MELO3C023981.2Watermelon (97103) v2medwmbB352
MELO3C023981.2Wax gourdmedwgoB375
MELO3C023981.2Wax gourdmedwgoB442
MELO3C023981.2Cucumber (Gy14) v2cgybmedB173
MELO3C023981.2Cucumber (Gy14) v2cgybmedB485
MELO3C023981.2Cucumber (Gy14) v1cgymedB203
MELO3C023981.2Cucumber (Gy14) v1cgymedB415
MELO3C023981.2Cucurbita maxima (Rimu)cmamedB257
MELO3C023981.2Cucurbita maxima (Rimu)cmamedB387
MELO3C023981.2Cucurbita maxima (Rimu)cmamedB489
MELO3C023981.2Cucurbita maxima (Rimu)cmamedB943
MELO3C023981.2Cucurbita moschata (Rifu)cmomedB239
MELO3C023981.2Cucurbita moschata (Rifu)cmomedB374
MELO3C023981.2Cucurbita moschata (Rifu)cmomedB476
MELO3C023981.2Cucurbita moschata (Rifu)cmomedB932
MELO3C023981.2Cucurbita pepo (Zucchini)cpemedB160
MELO3C023981.2Cucurbita pepo (Zucchini)cpemedB360
MELO3C023981.2Cucurbita pepo (Zucchini)cpemedB615
MELO3C023981.2Cucurbita pepo (Zucchini)cpemedB673
MELO3C023981.2Wild cucumber (PI 183967)cpimedB193
MELO3C023981.2Wild cucumber (PI 183967)cpimedB544
MELO3C023981.2Cucumber (Chinese Long) v2cumedB193
MELO3C023981.2Cucumber (Chinese Long) v2cumedB528
MELO3C023981.2Melon (DHL92) v3.6.1medmedB084
MELO3C023981.2Bottle gourd (USVL1VR-Ls)lsimedB221
MELO3C023981.2Bottle gourd (USVL1VR-Ls)lsimedB273
MELO3C023981.2Watermelon (Charleston Gray)medwcgB308
MELO3C023981.2Watermelon (Charleston Gray)medwcgB309
MELO3C023981.2Watermelon (97103) v1medwmB338
MELO3C023981.2Watermelon (97103) v1medwmB344
MELO3C023981.2Silver-seed gourdcarmedB0460
MELO3C023981.2Silver-seed gourdcarmedB0770
MELO3C023981.2Silver-seed gourdcarmedB0822