MELO3C023950.2 (gene) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACCTCCGTCCATTGACCGGTCACTGTTTGAGATCTGAGAAGAAAATAATGGCGCTGAATGCAGTGGACGTCACCGTATTATGATTACGATCAGAACTCCCAAACAAGAAACCTAATTTCATCCTCTTCTTGGCCGACAAAGACCCTTCTGCCTCTCTCAGCTTGTGTCCCGGTATGCTCAATTTCTTTTTTCCACCCAGTTATGAGCAACATTTAGTTTCGTTATTTGATTGATCAAATACTTTAGGTCTGCGAGAGTATGAATTTCTTGTAGTTTGGAATTTCTTAGACCGTCTCTAGTTCATACTTTGAGCTTTACATCTATAATGAAATGTCTAGCTAGATGGAAAAATCACCATAGTATTTGGTGCATTGTGAGTTTTTAGGAAGCAGTACCCTTGCTAGATTTCTCCTTCTACTGTTAATGATCCCTTTTCAGGAGATGAAGCTTCTGCTTAGTGGTCGGAATAACTCACTTGGAATTTTTCTATATACATACATGGCTGGTCTGGGATCTTTTTTCCTTCATTACGTACTTGTATTATAGGAGCAAATACTTTTGGAAATGAGCATAACTATAAGTAAGGACATGCTTAATCCTCTAGCACTAGTAATATTTCTGTTGGCTTCTGTTTGTCGTCTGAATGGAACATGGTTGGGCATTTGGGTAGACCACAAGTTTATCCATTATGAAGTTGAAGATGGAATAGTTGATAAAAGTATATCATTTTTTATCACATGGTCCATTAGAATTTTGGCTATTTTTCTTATTCTTCATTGTTCCTTAGATCCCCTGTTGGCACAGGAGCTCTGATATGTAGAATGATGACTTCATCAATGTTGATAAAAATCTTGAAGTTCATGTCGAATTTATTCAAATCTTCAAAGGAAACGTTGAAGACTAATATGCCTCGTTTGAATGCTTATGAAGACCCGAGGTTCAATAGATCTGAAAGTAGAAACTTCTTGGTTCAATCCTGTAGTTCTTTTATACCTGGCGATGTATATCCTTCAACATTCTATTCCATACCTGAACGGAGAAAATTTTCAAAGGAAGAATGGAAAAAGTTCACCAAGGACTCAACTAAAAAGGCTCTGGAAGGACTAGCTTTTTCACCAGATTTTACTAGGTGGTTTGTTGATAATGCAGATGGAATCAACATAACTCCCCGTGCAATAGAGTTGAGAAGTATCAAAAAATGACCCTCTTGGT ACCTCCGTCCATTGACCGGTCACTGTTTGAGATCTGAGAAGAAAATAATGGCGCTGAATGCAGTGGACGTCACCGTATTATGATTACGATCAGAACTCCCAAACAAGAAACCTAATTTCATCCTCTTCTTGGCCGACAAAGACCCTTCTGCCTCTCTCAGCTTGTGTCCCGATCCCCTGTTGGCACAGGAGCTCTGATATGTAGAATGATGACTTCATCAATGTTGATAAAAATCTTGAAGTTCATGTCGAATTTATTCAAATCTTCAAAGGAAACGTTGAAGACTAATATGCCTCGTTTGAATGCTTATGAAGACCCGAGGTTCAATAGATCTGAAAGTAGAAACTTCTTGGTTCAATCCTGTAGTTCTTTTATACCTGGCGATGTATATCCTTCAACATTCTATTCCATACCTGAACGGAGAAAATTTTCAAAGGAAGAATGGAAAAAGTTCACCAAGGACTCAACTAAAAAGGCTCTGGAAGGACTAGCTTTTTCACCAGATTTTACTAGGTGGTTTGTTGATAATGCAGATGGAATCAACATAACTCCCCGTGCAATAGAGTTGAGAAGTATCAAAAAATGACCCTCTTGGT ATGATGACTTCATCAATGTTGATAAAAATCTTGAAGTTCATGTCGAATTTATTCAAATCTTCAAAGGAAACGTTGAAGACTAATATGCCTCGTTTGAATGCTTATGAAGACCCGAGGTTCAATAGATCTGAAAGTAGAAACTTCTTGGTTCAATCCTGTAGTTCTTTTATACCTGGCGATGTATATCCTTCAACATTCTATTCCATACCTGAACGGAGAAAATTTTCAAAGGAAGAATGGAAAAAGTTCACCAAGGACTCAACTAAAAAGGCTCTGGAAGGACTAGCTTTTTCACCAGATTTTACTAGGTGGTTTGTTGATAATGCAGATGGAATCAACATAACTCCCCGTGCAATAGAGTTGAGAAGTATCAAAAAATGA MMTSSMLIKILKFMSNLFKSSKETLKTNMPRLNAYEDPRFNRSESRNFLVQSCSSFIPGDVYPSTFYSIPERRKFSKEEWKKFTKDSTKKALEGLAFSPDFTRWFVDNADGINITPRAIELRSIKK
BLAST of MELO3C023950.2 vs. NCBI nr
Match: XP_008461773.1 (PREDICTED: uncharacterized protein LOC103500297 [Cucumis melo]) HSP 1 Score: 116.7 bits (291), Expect = 5.7e-23 Identity = 68/128 (53.12%), Postives = 83/128 (64.84%), Query Frame = 0
BLAST of MELO3C023950.2 vs. NCBI nr
Match: XP_016902769.1 (PREDICTED: nuclear envelope integral membrane protein 1 isoform X1 [Cucumis melo]) HSP 1 Score: 114.0 bits (284), Expect = 3.7e-22 Identity = 57/103 (55.34%), Postives = 69/103 (66.99%), Query Frame = 0
BLAST of MELO3C023950.2 vs. NCBI nr
Match: XP_023532922.1 (uncharacterized protein LOC111794944 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 109.0 bits (271), Expect = 1.2e-20 Identity = 67/140 (47.86%), Postives = 81/140 (57.86%), Query Frame = 0
BLAST of MELO3C023950.2 vs. NCBI nr
Match: XP_022149433.1 (uncharacterized protein LOC111017862 [Momordica charantia]) HSP 1 Score: 108.2 bits (269), Expect = 2.0e-20 Identity = 67/148 (45.27%), Postives = 85/148 (57.43%), Query Frame = 0
BLAST of MELO3C023950.2 vs. NCBI nr
Match: XP_023006880.1 (uncharacterized protein LOC111499541 [Cucurbita maxima] >XP_023006881.1 uncharacterized protein LOC111499541 [Cucurbita maxima] >XP_023006882.1 uncharacterized protein LOC111499541 [Cucurbita maxima]) HSP 1 Score: 106.3 bits (264), Expect = 7.7e-20 Identity = 65/140 (46.43%), Postives = 81/140 (57.86%), Query Frame = 0
BLAST of MELO3C023950.2 vs. TAIR10
Match: AT5G67610.2 (Uncharacterized conserved protein (DUF2215)) HSP 1 Score: 63.2 bits (152), Expect = 1.4e-10 Identity = 27/58 (46.55%), Postives = 36/58 (62.07%), Query Frame = 0
BLAST of MELO3C023950.2 vs. TAIR10
Match: AT1G28760.1 (Uncharacterized conserved protein (DUF2215)) HSP 1 Score: 55.5 bits (132), Expect = 2.8e-08 Identity = 30/84 (35.71%), Postives = 46/84 (54.76%), Query Frame = 0
BLAST of MELO3C023950.2 vs. TAIR10
Match: AT3G49840.1 (Uncharacterized conserved protein (DUF2215)) HSP 1 Score: 48.1 bits (113), Expect = 4.5e-06 Identity = 28/58 (48.28%), Postives = 36/58 (62.07%), Query Frame = 0
BLAST of MELO3C023950.2 vs. TrEMBL
Match: tr|A0A1S3CFC0|A0A1S3CFC0_CUCME (uncharacterized protein LOC103500297 OS=Cucumis melo OX=3656 GN=LOC103500297 PE=4 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 3.8e-23 Identity = 68/128 (53.12%), Postives = 83/128 (64.84%), Query Frame = 0
BLAST of MELO3C023950.2 vs. TrEMBL
Match: tr|A0A1S4E3G6|A0A1S4E3G6_CUCME (nuclear envelope integral membrane protein 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500299 PE=4 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 2.4e-22 Identity = 57/103 (55.34%), Postives = 69/103 (66.99%), Query Frame = 0
BLAST of MELO3C023950.2 vs. TrEMBL
Match: tr|A0A2H5PCL5|A0A2H5PCL5_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_124070 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 3.0e-12 Identity = 49/125 (39.20%), Postives = 68/125 (54.40%), Query Frame = 0
BLAST of MELO3C023950.2 vs. TrEMBL
Match: tr|V4SFJ3|V4SFJ3_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10025460mg PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 3.9e-12 Identity = 49/128 (38.28%), Postives = 68/128 (53.12%), Query Frame = 0
BLAST of MELO3C023950.2 vs. TrEMBL
Match: tr|A0A2P4L8V3|A0A2P4L8V3_QUESU (Nuclear envelope integral membrane protein 1 OS=Quercus suber OX=58331 GN=CFP56_63861 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 8.7e-12 Identity = 52/156 (33.33%), Postives = 81/156 (51.92%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |