MELO3C023931.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C023931.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptionras-related protein Rab11C
Locationchr04 : 24683049 .. 24686606 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTCACCCAAATTTTGTAAAGAAACCTTAACTTTTTTTCCTCTCCCATATTTCTCTTCGACAAAAGAAAGCTCCACCATGCGCGTCTTCCGTTTCTAATCGTTCGTCTGCTCGCGTCGATTCCAGCAGTCGTCGTCTGCTCACAGTGTCCGCCGCCAGTTCGATCGATCTCCTCAAGCTGCTGCCATTTCTGCTCTTTTCCAGTCCGATCTTCTCAAGTTGCCGTCGTTATCTGCTCACAGCATCCGCCACCAGTTCGATCGATCTCCTCAAGCTGTTGCCATTTTTGCCCTTTTCCAGTCCGATCTCCTCAAGTCGCCGTCGTCTGCTCGTTGTGTTCGCTGGTTCGTCCGCCAGCAGTTGCATCTGTCGTCATTTTTGCTCTTTGCAACCGCAACCATCACCAGGTTCTTAGCTCATTATTTATTTCTTTATTGCTTATTTTGCGTCACTGCTCAGTTTGTTTATTCAAGATTGGTGTGTCACTTGGGAATGGCTATGGTGGCCACTACCCTTTCGAACCTGTCTTTTGCCCTCTTCCATGGAAATTCACACAAAAATGAATTTGGGTTTATGGGTATGTGGAGATAGCCCATCAAGTATCTCAAATCCAATCTTAGAGCTCTAGTTGTGAGGTAATCGTTTCTATTTTTGTTCTTTTTAGACGTTTACTTCTTTTTTAGTTGTTTTCATGAGTTTAACTGGGTGGAGGTTTATGTAAGCTTGTGGTCTCCGTTCTTTTCACTATTTTTAAAAAAATCAATCATGGGTTTGGGATATTAGTTGCCTTTTTCATCTTTGTTTTGAGCTTTAGCTTTTGGGTCTCTTTGCAGATGTTCCTTTGTTCAAATGATATTGCAATAGAGATAATTATTGGTTTGAACTTGAAATTCTTATACCATATATTATCTTAACTTTCTCCTAAATTTACCTCTGGAAATAGTGTTGCGCTAATATCATTCCTGGTTGAACTTTCAATCTTCTTCCTTTAGCGTAGTTAGCGAATGAAATTCTTACAGGTTTCATGTTAACTCAAGGAGTTAGCAATGGATCTTGATTCATCCAAATTTGATATAGTTTTTGTTGTTTTGTTTAGGGTTGTTAGATGAAGGGAGAAAGATGTGGTTATGTGTTGTGGAACTTGTTTGCGTGGATGCCAATCAACTAACGTTGGTGAACCAAAAACAAAAAGAAATTTTCTTGACAATGCTAGCAATATTCTTACCAATTTGTTAAGTGGTGGAAATTTGGGATCTATGTCGATAGCTGAAGGTGCGGTCTCTGATTTGTTTGGCCGTCTACTCTTCTTTGCTCTATATGATTGGTTCTTATAGGTATTTGCATCTCATAAATCTCTTCGGTTTCAACTGAAATATTAGTTTCCTATAAGGACACTCACTCCCTCTTATAATGTTAATGTGATGTGCACCTTTTCATTTTGTCTGCTCATGAGATCTAAACATCTATTTCTTTTTATTCATTTTTTATTCTTCATCTGCAGCATAGATCTGTTTATAAACTTGCCTTTGGACCAAAAGCATTTGTTGTTGTATCAGAACACATTTGCTTTAGAACTTTTGAAGTGCTTTTTATCATGTTCTGTATACTTTCTTTTGGTTACAACTTGTAGGGCAGAGTTAGTAAAAGGGCTTGAAATTAAAAAAGGAGAATATAAATTTGGTTAAAACTATTCTATCACTGTTCTTTATGTTGCTACTGCAGCTTCTACTCCTAAAATTCATCATGATATCTCTAACATCTCTAATTTCCTCCTCTATAGCTTTTAAGTTCGACAGTAAGTACTGATTTGTATTGTTCTGTAGTTGTTCACTCCCAAATTGATATTGACATTCACTTGTTAGGCTTGGTCGAAATAGATCCAAACAAAAGAATGCCGCATTTCACCTCAGAGAGAAGAGGGTTAAATACATGGCTTTTCATTTCTTTTTTTTTTTTTACAAAGTAAAATGTTCTTTTAAGGAACTTCATTGCTAATTTTCATGGTATTTTTTTCTGTGGCTAATGTTATGTTTACCTTAGAATGTTTCGTATTTACTTTGATAGTTCATGATCTTCTTGTTCTTCATGATTTTCATATTTAATAGGAGGCTATTATCCCACCCCCAAGTTTTAATTCTCTTCCTTGACACCTACTAATATGCAGATCTATGCTCCAAGGTATTCATTCTTTTCTATACTAGAAAATTGTCGTTGTGCACTTCTTAATATCTTGTTGACTTGAGCTTCAGTTCTAGATTGTTGGTTCTAATTTTTTGGTTTGTGGTCATTTGATTTGTAACTTTGTTTGAAAATTCCACTGTTTACTCAATGATTCAATTCTATGAAGGATGAATTTTGTTATAGTTGTTTGAAATGAAACAAATTTTTGGTCTTGTGGCATTACACAATTGTGTGAATTTATAGATTTATACGTTTTTTTTTCTAGGTGTACAAATGAAACAAATTTTTGGTCTTGTAGCATTACACGATTGTTCGGCTTATTTTAATGCATCTCTCAATATTTACCTGCTTTCTAAATAGATATGTACTCAAGAAAATGATCGCGGTTAGTTTTCTATTGTTCTCTGTTGCTAATGGAACCCCAATCTTTATAGCTAAAATGACCCATTCAAGATTTATACTTTTTTTTTCTGAGTGTAGAAATGAAACAAATTTTTGCTCTTATGGCAAAGTAAACAGAGAAGTTCAAGTGCACTGCCCACCAAGAGGTTAGTTTATTTAGAACCTATATCAACTATTTAATTGTTTGAAATGCTACTTATTATTCCCAAGATATGATCAAATTGACTTGGTTCTGCCTTTAAAATTTGTCAACTACAAATGAATTGCTAGTTAACTCGGGGGGTAAATAAATAGCTATTAACTTAGGAAATGTTTAATGTCTGCCTCACATTCAACGATAATGCTTAATGCATGTTACAAAACATATCACATAGAAATTGGAGAAAATATAAAGAATCCGGGGATTCTTCAATTCGCTTTTCAATTTGGGGATTCTCTTGCTCCTTAAATGTTTCCGTTTCAGCTACCTACTACAAATGATTCCAATTCTTTCAATTTTGTTTACTCAATTGTTGAATTTGATGTTTTTGGATTAGGTTTGTTCAAGAAATCTAGGGCAGAGACTGCTATGGCTCATAAGGTAGACCACGAGTATGATTATTTGTTTAAGATTGTTCTGATTGGGGATTCCGACGTTGGGAAGTCCAACATTCTTTCGAGATTTACTAGAAACGAGTTTTGCTTGGAGTCCAAATCCACCATTGATCTTTTGGGTTAGATAAACAAGTTTTGTTGATACTAGATATAAGAGAACTAGTTTTGTTGATATTTTGTTAATACTGGATATAGGTGAACTAGTTTTGTTGATATTTTGTTGATATTGGATATAGGTAAAAGACAAGTTTTGATATGGTATACCTTTAGGCTATACATATATTTTGTTTATACTGACATATAGATGGAATGTTTAGGCTATTGTTAGAAGTTTGGGCTGCACATATATATGTTGTAATGAAGTATGTAATGACCAACTAA

mRNA sequence

CTTTCACCCAAATTTTGTAAAGAAACCTTAACTTTTTTTCCTCTCCCATATTTCTCTTCGACAAAAGAAAGCTCCACCATGCGCGTCTTCCGTTTCTAATCGTTCGTCTGCTCGCGTCGATTCCAGCAGTCGTCGTCTGCTCACAGTGTCCGCCGCCAGTTCGATCGATCTCCTCAAGCTGCTGCCATTTCTGCTCTTTTCCAGTCCGATCTTCTCAAGTTGCCGTCGTTATCTGCTCACAGCATCCGCCACCAGTTCGATCGATCTCCTCAAGCTGTTGCCATTTTTGCCCTTTTCCAGTCCGATCTCCTCAAGTCGCCGTCGTCTGCTCGTTGTGTTCGCTGGTTCGTCCGCCAGCAGTTGCATCTGTCGTCATTTTTGCTCTTTGCAACCGCAACCATCACCAGAAATGAAACAAATTTTTGCTCTTATGGCAAAGTAAACAGAGAAGTTCAAGTGCACTGCCCACCAAGAGGTTTGTTCAAGAAATCTAGGGCAGAGACTGCTATGGCTCATAAGGTAGACCACGAGTATGATTATTTGTTTAAGATTGTTCTGATTGGGGATTCCGACGTTGGGAAGTCCAACATTCTTTCGAGATTTACTAGAAACGAGTTTTGCTTGGAGTCCAAATCCACCATTGATCTTTTGGGTTAGATAAACAAGTTTTGTTGATACTAGATATAAGAGAACTAGTTTTGTTGATATTTTGTTAATACTGGATATAGGTGAACTAGTTTTGTTGATATTTTGTTGATATTGGATATAGGTAAAAGACAAGTTTTGATATGGTATACCTTTAGGCTATACATATATTTTGTTTATACTGACATATAGATGGAATGTTTAGGCTATTGTTAGAAGTTTGGGCTGCACATATATATGTTGTAATGAAGTATGTAATGACCAACTAA

Coding sequence (CDS)

ATGGCTCATAAGGTAGACCACGAGTATGATTATTTGTTTAAGATTGTTCTGATTGGGGATTCCGACGTTGGGAAGTCCAACATTCTTTCGAGATTTACTAGAAACGAGTTTTGCTTGGAGTCCAAATCCACCATTGATCTTTTGGGTTAG

Protein sequence

MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG
Homology
[Close]
BLAST of MELO3C023931.2 vs. NCBI nr
Match: XP_008461753.1 (PREDICTED: ras-related protein Rab11C-like isoform X1 [Cucumis melo] >XP_008461755.1 PREDICTED: ras-related protein Rab11C-like isoform X1 [Cucumis melo])

HSP 1 Score: 103.2 bits (256), Expect = 2.5e-19
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0 

Query: 1  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG 50
          MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG
Sbjct: 41 MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG 89

[Close]
BLAST of MELO3C023931.2 vs. NCBI nr
Match: XP_008461756.1 (PREDICTED: ras-related protein Rab11C-like isoform X2 [Cucumis melo])

HSP 1 Score: 103.2 bits (256), Expect = 2.5e-19
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0 

Query: 1  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG 50
          MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG
Sbjct: 40 MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG 88

[Close]
BLAST of MELO3C023931.2 vs. NCBI nr
Match: XP_008448132.1 (PREDICTED: ras-related protein Rab11C-like [Cucumis melo])

HSP 1 Score: 94.0 bits (232), Expect = 1.5e-16
Identity = 46/49 (93.88%), Postives = 46/49 (93.88%), Query Frame = 0 

Query: 1  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG 50
          MAHKVDHEYDYLFKIV IGDS VGKSNILSRFTRNEF LESKSTIDLLG
Sbjct: 41 MAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTIDLLG 89

[Close]
BLAST of MELO3C023931.2 vs. NCBI nr
Match: XP_004143134.1 (PREDICTED: ras-related protein Rab11C [Cucumis sativus] >XP_008464080.1 PREDICTED: ras-related protein Rab11C [Cucumis melo] >KGN47119.1 hypothetical protein Csa_6G188120 [Cucumis sativus])

HSP 1 Score: 92.8 bits (229), Expect = 3.4e-16
Identity = 44/45 (97.78%), Postives = 44/45 (97.78%), Query Frame = 0 

Query: 1  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI 46
          MAHKVDHEYDYLFKIVLIGDS VGKSNILSRFTRNEFCLESKSTI
Sbjct: 1  MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTI 45

[Close]
BLAST of MELO3C023931.2 vs. NCBI nr
Match: XP_006850439.1 (ras-related protein Rab2BV [Amborella trichopoda] >XP_011625591.1 ras-related protein Rab2BV [Amborella trichopoda] >XP_020526611.1 ras-related protein Rab2BV [Amborella trichopoda] >ERN12020.1 hypothetical protein AMTR_s00165p00060220 [Amborella trichopoda])

HSP 1 Score: 92.8 bits (229), Expect = 3.4e-16
Identity = 44/45 (97.78%), Postives = 44/45 (97.78%), Query Frame = 0 

Query: 1  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI 46
          MAHKVDHEYDYLFKIVLIGDS VGKSNILSRFTRNEFCLESKSTI
Sbjct: 1  MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTI 45

[Close]
BLAST of MELO3C023931.2 vs. TAIR10
Match: AT1G07410.1 (RAB GTPase homolog A2B)

HSP 1 Score: 88.6 bits (218), Expect = 1.2e-18
Identity = 41/45 (91.11%), Postives = 44/45 (97.78%), Query Frame = 0 

Query: 1  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI 46
          MA+++DHEYDYLFKIVLIGDS VGKSNILSRFTRNEFCLESKSTI
Sbjct: 1  MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTI 45

[Close]
BLAST of MELO3C023931.2 vs. TAIR10
Match: AT3G46830.1 (RAB GTPase homolog A2C)

HSP 1 Score: 87.0 bits (214), Expect = 3.4e-18
Identity = 41/45 (91.11%), Postives = 42/45 (93.33%), Query Frame = 0 

Query: 1  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI 46
          M H+VD EYDYLFKIVLIGDS VGKSNILSRFTRNEFCLESKSTI
Sbjct: 1  MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTI 45

[Close]
BLAST of MELO3C023931.2 vs. TAIR10
Match: AT5G59150.1 (RAB GTPase homolog A2D)

HSP 1 Score: 84.7 bits (208), Expect = 1.7e-17
Identity = 39/45 (86.67%), Postives = 43/45 (95.56%), Query Frame = 0 

Query: 1  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI 46
          MAH+V+ +YDYLFKIVLIGDS VGK+NILSRFTRNEFCLESKSTI
Sbjct: 1  MAHRVEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTI 45

[Close]
BLAST of MELO3C023931.2 vs. TAIR10
Match: AT1G09630.1 (RAB GTPase 11C)

HSP 1 Score: 82.0 bits (201), Expect = 1.1e-16
Identity = 38/45 (84.44%), Postives = 41/45 (91.11%), Query Frame = 0 

Query: 1  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI 46
          MA + D EYDYLFK+VLIGDS VGKSN+LSRFTRNEFCLESKSTI
Sbjct: 1  MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTI 45

[Close]
BLAST of MELO3C023931.2 vs. TAIR10
Match: AT5G60860.1 (RAB GTPase homolog A1F)

HSP 1 Score: 77.4 bits (189), Expect = 2.7e-15
Identity = 36/44 (81.82%), Postives = 40/44 (90.91%), Query Frame = 0 

Query: 2  AHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI 46
          A++ D EYDYLFK+VLIGDS VGKSN+LSRFTRNEF LESKSTI
Sbjct: 3  AYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTI 46

[Close]
BLAST of MELO3C023931.2 vs. Swiss-Prot
Match: sp|Q40193|RB11C_LOTJA (Ras-related protein Rab11C OS=Lotus japonicus OX=34305 GN=RAB11C PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 2.5e-18
Identity = 43/45 (95.56%), Postives = 44/45 (97.78%), Query Frame = 0 

Query: 1  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI 46
          MAH+VDHEYDYLFKIVLIGDS VGKSNILSRFTRNEFCLESKSTI
Sbjct: 1  MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTI 45

[Close]
BLAST of MELO3C023931.2 vs. Swiss-Prot
Match: sp|Q39434|RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris OX=161934 GN=RAB2BV PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.6e-17
Identity = 42/45 (93.33%), Postives = 44/45 (97.78%), Query Frame = 0 

Query: 1  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI 46
          MA++VDHEYDYLFKIVLIGDS VGKSNILSRFTRNEFCLESKSTI
Sbjct: 1  MANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTI 45

[Close]
BLAST of MELO3C023931.2 vs. Swiss-Prot
Match: sp|Q9LNW1|RAA2B_ARATH (Ras-related protein RABA2b OS=Arabidopsis thaliana OX=3702 GN=RABA2B PE=2 SV=2)

HSP 1 Score: 88.6 bits (218), Expect = 2.1e-17
Identity = 41/45 (91.11%), Postives = 44/45 (97.78%), Query Frame = 0 

Query: 1  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI 46
          MA+++DHEYDYLFKIVLIGDS VGKSNILSRFTRNEFCLESKSTI
Sbjct: 1  MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTI 45

[Close]
BLAST of MELO3C023931.2 vs. Swiss-Prot
Match: sp|Q40523|RB11A_TOBAC (Ras-related protein Rab11A OS=Nicotiana tabacum OX=4097 GN=RAB11A PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 3.6e-17
Identity = 41/45 (91.11%), Postives = 44/45 (97.78%), Query Frame = 0 

Query: 1  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI 46
          MA++VDHEYDYLFK+VLIGDS VGKSNILSRFTRNEFCLESKSTI
Sbjct: 1  MANRVDHEYDYLFKMVLIGDSGVGKSNILSRFTRNEFCLESKSTI 45

[Close]
BLAST of MELO3C023931.2 vs. Swiss-Prot
Match: sp|Q96283|RAA2C_ARATH (Ras-related protein RABA2c OS=Arabidopsis thaliana OX=3702 GN=RABA2C PE=2 SV=4)

HSP 1 Score: 87.0 bits (214), Expect = 6.2e-17
Identity = 41/45 (91.11%), Postives = 42/45 (93.33%), Query Frame = 0 

Query: 1  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI 46
          M H+VD EYDYLFKIVLIGDS VGKSNILSRFTRNEFCLESKSTI
Sbjct: 1  MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTI 45

[Close]
BLAST of MELO3C023931.2 vs. TrEMBL
Match: tr|A0A1S3CFF6|A0A1S3CFF6_CUCME (ras-related protein Rab11C-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500284 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.7e-19
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0 

Query: 1  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG 50
          MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG
Sbjct: 41 MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG 89

[Close]
BLAST of MELO3C023931.2 vs. TrEMBL
Match: tr|A0A1S3CFW6|A0A1S3CFW6_CUCME (ras-related protein Rab11C-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500284 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.7e-19
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0 

Query: 1  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG 50
          MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG
Sbjct: 40 MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG 88

[Close]
BLAST of MELO3C023931.2 vs. TrEMBL
Match: tr|A0A1S3BJ02|A0A1S3BJ02_CUCME (ras-related protein Rab11C-like OS=Cucumis melo OX=3656 GN=LOC103490420 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.0e-16
Identity = 46/49 (93.88%), Postives = 46/49 (93.88%), Query Frame = 0 

Query: 1  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG 50
          MAHKVDHEYDYLFKIV IGDS VGKSNILSRFTRNEF LESKSTIDLLG
Sbjct: 41 MAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTIDLLG 89

[Close]
BLAST of MELO3C023931.2 vs. TrEMBL
Match: tr|A0A200R515|A0A200R515_9MAGN (Small GTPase superfamily OS=Macleaya cordata OX=56857 GN=BVC80_1835g141 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 2.3e-16
Identity = 44/45 (97.78%), Postives = 44/45 (97.78%), Query Frame = 0 

Query: 1  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI 46
          MAHKVDHEYDYLFKIVLIGDS VGKSNILSRFTRNEFCLESKSTI
Sbjct: 1  MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTI 45

[Close]
BLAST of MELO3C023931.2 vs. TrEMBL
Match: tr|A0A1S3CKN1|A0A1S3CKN1_CUCME (ras-related protein Rab11C OS=Cucumis melo OX=3656 GN=LOC103502054 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 2.3e-16
Identity = 44/45 (97.78%), Postives = 44/45 (97.78%), Query Frame = 0 

Query: 1  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI 46
          MAHKVDHEYDYLFKIVLIGDS VGKSNILSRFTRNEFCLESKSTI
Sbjct: 1  MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTI 45

The following BLAST results are available for this feature:
BLAST of MELO3C023931.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008461753.12.5e-19100.00PREDICTED: ras-related protein Rab11C-like isoform X1 [Cucumis melo] >XP_0084617... [more]
XP_008461756.12.5e-19100.00PREDICTED: ras-related protein Rab11C-like isoform X2 [Cucumis melo][more]
XP_008448132.11.5e-1693.88PREDICTED: ras-related protein Rab11C-like [Cucumis melo][more]
XP_004143134.13.4e-1697.78PREDICTED: ras-related protein Rab11C [Cucumis sativus] >XP_008464080.1 PREDICTE... [more]
XP_006850439.13.4e-1697.78ras-related protein Rab2BV [Amborella trichopoda] >XP_011625591.1 ras-related pr... [more]
BLAST of MELO3C023931.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G07410.11.2e-1891.11RAB GTPase homolog A2B[more]
AT3G46830.13.4e-1891.11RAB GTPase homolog A2C[more]
AT5G59150.11.7e-1786.67RAB GTPase homolog A2D[more]
AT1G09630.11.1e-1684.44RAB GTPase 11C[more]
AT5G60860.12.7e-1581.82RAB GTPase homolog A1F[more]
BLAST of MELO3C023931.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q40193|RB11C_LOTJA2.5e-1895.56Ras-related protein Rab11C OS=Lotus japonicus OX=34305 GN=RAB11C PE=2 SV=1[more]
sp|Q39434|RB2BV_BETVU1.6e-1793.33Ras-related protein Rab2BV OS=Beta vulgaris OX=161934 GN=RAB2BV PE=2 SV=1[more]
sp|Q9LNW1|RAA2B_ARATH2.1e-1791.11Ras-related protein RABA2b OS=Arabidopsis thaliana OX=3702 GN=RABA2B PE=2 SV=2[more]
sp|Q40523|RB11A_TOBAC3.6e-1791.11Ras-related protein Rab11A OS=Nicotiana tabacum OX=4097 GN=RAB11A PE=2 SV=1[more]
sp|Q96283|RAA2C_ARATH6.2e-1791.11Ras-related protein RABA2c OS=Arabidopsis thaliana OX=3702 GN=RABA2C PE=2 SV=4[more]
BLAST of MELO3C023931.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CFF6|A0A1S3CFF6_CUCME1.7e-19100.00ras-related protein Rab11C-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC1035002... [more]
tr|A0A1S3CFW6|A0A1S3CFW6_CUCME1.7e-19100.00ras-related protein Rab11C-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC1035002... [more]
tr|A0A1S3BJ02|A0A1S3BJ02_CUCME1.0e-1693.88ras-related protein Rab11C-like OS=Cucumis melo OX=3656 GN=LOC103490420 PE=4 SV=... [more]
tr|A0A200R515|A0A200R515_9MAGN2.3e-1697.78Small GTPase superfamily OS=Macleaya cordata OX=56857 GN=BVC80_1835g141 PE=4 SV=... [more]
tr|A0A1S3CKN1|A0A1S3CKN1_CUCME2.3e-1697.78ras-related protein Rab11C OS=Cucumis melo OX=3656 GN=LOC103502054 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR001806Small_GTPase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C023931.2.1MELO3C023931.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.40.50.300coord: 4..47
e-value: 2.8E-10
score: 41.6
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 1..46
NoneNo IPR availablePANTHERPTHR24073:SF495RAS-RELATED PROTEIN RABA2Bcoord: 1..46
NoneNo IPR availablePROSITEPS51419RABcoord: 8..49
score: 9.138
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 14..45
e-value: 2.0E-8
score: 33.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILYSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 8..46

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C023931.2Cucumber (Gy14) v2cgybmedB173
MELO3C023931.2Cucumber (Gy14) v1cgymedB311
MELO3C023931.2Cucumber (Gy14) v1cgymedB312
MELO3C023931.2Cucurbita maxima (Rimu)cmamedB257
MELO3C023931.2Cucurbita maxima (Rimu)cmamedB489
MELO3C023931.2Cucurbita moschata (Rifu)cmomedB239
MELO3C023931.2Cucurbita moschata (Rifu)cmomedB374
MELO3C023931.2Cucurbita moschata (Rifu)cmomedB473
MELO3C023931.2Cucurbita moschata (Rifu)cmomedB476
MELO3C023931.2Cucurbita pepo (Zucchini)cpemedB615
MELO3C023931.2Cucurbita pepo (Zucchini)cpemedB673
MELO3C023931.2Wild cucumber (PI 183967)cpimedB193
MELO3C023931.2Cucumber (Chinese Long) v2cumedB193
MELO3C023931.2Bottle gourd (USVL1VR-Ls)lsimedB221
MELO3C023931.2Bottle gourd (USVL1VR-Ls)lsimedB273
MELO3C023931.2Watermelon (Charleston Gray)medwcgB309
MELO3C023931.2Watermelon (97103) v1medwmB344
MELO3C023931.2Silver-seed gourdcarmedB0365
MELO3C023931.2Silver-seed gourdcarmedB0460
MELO3C023931.2Silver-seed gourdcarmedB0770
MELO3C023931.2Silver-seed gourdcarmedB0822
MELO3C023931.2Cucumber (Chinese Long) v3cucmedB198
MELO3C023931.2Watermelon (97103) v2medwmbB305
MELO3C023931.2Wax gourdmedwgoB375