MELO3C023837 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C023837
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionMitochondrial transcription termination factor family protein, putative
Locationchr10 : 6108372 .. 6108785 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAAAGGTTGATAGAATGATTCAAGTAGTGAAAACGCTTAAAGAATTGGGCATTGAACCAAAGGCTTCTACGTTTGTTCATGCACTTAGAGTAAGGGGTGGAATGAGTGATCCAATTTGGAAGAAGAAAATAAATGTTTTGAAGAGTTTGGGATGGTCTGAGAATGAGATTTTTACACTATTTAAGAGACAACCAATGTCTTTAGCTCGTTCGGAGGAGAAAATGAGGTATGCCGCAGATTTCTGTTTCAACACTGTAAAGTTGGATCCAGGAACTGTAATTTCTTACCCTATGTCCTTCGTGTATTCAGTCGACAAGCAGCTGCGGCCAAAGTACAAAGTTCTTGAGGTTTTGAAGCTAAAAAATCTTCTCAAGAACAAAAAGATTGTTCGGCCCCTTGTACGAGGGTAG

mRNA sequence

ATGCAAAAGGTTGATAGAATGATTCAAGTAGTGAAAACGCTTAAAGAATTGGGCATTGAACCAAAGGCTTCTACGTTTGTTCATGCACTTAGAGTAAGGGGTGGAATGAGTGATCCAATTTGGAAGAAGAAAATAAATGTTTTGAAGAGTTTGGGATGGTCTGAGAATGAGATTTTTACACTATTTAAGAGACAACCAATGTCTTTAGCTCGTTCGGAGGAGAAAATGAGGTATGCCGCAGATTTCTGTTTCAACACTGTAAAGTTGGATCCAGGAACTGTAATTTCTTACCCTATGTCCTTCGTGTATTCAGTCGACAAGCAGCTGCGGCCAAAGTACAAAGTTCTTGAGGTTTTGAAGCTAAAAAATCTTCTCAAGAACAAAAAGATTGTTCGGCCCCTTGTACGAGGGTAG

Coding sequence (CDS)

ATGCAAAAGGTTGATAGAATGATTCAAGTAGTGAAAACGCTTAAAGAATTGGGCATTGAACCAAAGGCTTCTACGTTTGTTCATGCACTTAGAGTAAGGGGTGGAATGAGTGATCCAATTTGGAAGAAGAAAATAAATGTTTTGAAGAGTTTGGGATGGTCTGAGAATGAGATTTTTACACTATTTAAGAGACAACCAATGTCTTTAGCTCGTTCGGAGGAGAAAATGAGGTATGCCGCAGATTTCTGTTTCAACACTGTAAAGTTGGATCCAGGAACTGTAATTTCTTACCCTATGTCCTTCGTGTATTCAGTCGACAAGCAGCTGCGGCCAAAGTACAAAGTTCTTGAGGTTTTGAAGCTAAAAAATCTTCTCAAGAACAAAAAGATTGTTCGGCCCCTTGTACGAGGGTAG

Protein sequence

MQKVDRMIQVVKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFTLFKRQPMSLARSEEKMRYAADFCFNTVKLDPGTVISYPMSFVYSVDKQLRPKYKVLEVLKLKNLLKNKKIVRPLVRG*
Homology
[Close]
BLAST of MELO3C023837 vs. TrEMBL
Match: B9SHV1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0621880 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.4e-30
Identity = 66/135 (48.89%), Postives = 95/135 (70.37%), Query Frame = 1 

Query: 1   MQKVDRMIQVVKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFT 60
           MQK DRM+  V  +K LG+EPK+  F+HA+RV   MS+  WKKK  ++KS+GW+E EI +
Sbjct: 166 MQKHDRMVYAVNAVKNLGLEPKSRMFIHAVRVIISMSELTWKKKFEMMKSMGWNEEEILS 225

Query: 61  LFKRQPMSLARSEEKMRYAADFCFNTVKLDPGTVISYPMSFVYSVDKQLRPKYKVLEVLK 120
            FKR P+ LA SEEK++ A DF  NT+KL P  +I+YP   +Y++D +LRP+Y VL+VL+
Sbjct: 226 AFKRDPLCLACSEEKIKNAMDFYLNTMKLKPHVIIAYPKFLMYAIDTRLRPRYNVLKVLE 285

Query: 121 LKNLLKNKKIVRPLV 136
            K L++  K +  L+
Sbjct: 286 SKKLIEGDKKIEWLL 300

[Close]
BLAST of MELO3C023837 vs. TrEMBL
Match: A0A067L028_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24592 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.6e-29
Identity = 67/134 (50.00%), Postives = 93/134 (69.40%), Query Frame = 1 

Query: 2   QKVDRMIQVVKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFTL 61
           Q  DRM+  V  +  LGI+P A  FVHA+RV   MSD  WKKK  +LK++GWSE EIF+ 
Sbjct: 214 QNHDRMVHAVHAVNNLGIQPTARRFVHAVRVMMSMSDFTWKKKFELLKNVGWSEEEIFSA 273

Query: 62  FKRQPMSLARSEEKMRYAADFCFNTVKLDPGTVISYPMSFVYSVDKQLRPKYKVLEVLKL 121
           FK++P  LA SEEK + A DF  NT+KL P T+I+ P+  ++SVDK+LRP+Y VL+ L+ 
Sbjct: 274 FKKKPHFLASSEEKFKNAMDFYLNTMKLQPQTLIASPIFLMHSVDKRLRPRYNVLQALES 333

Query: 122 KNLLKNKKIVRPLV 136
           K L++ +K +  L+
Sbjct: 334 KKLIEGRKKIEWLL 347

[Close]
BLAST of MELO3C023837 vs. TrEMBL
Match: B9GLU7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s07180g PE=4 SV=2)

HSP 1 Score: 137.1 bits (344), Expect = 1.6e-29
Identity = 66/124 (53.23%), Postives = 92/124 (74.19%), Query Frame = 1 

Query: 3   KVDRMIQVVKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFTLF 62
           K +RM++VV ++K LG+EPKA  FVHALRV  GMS+  WK+KI  +KSLGW+E+E+   F
Sbjct: 216 KPERMVRVVNSVKNLGLEPKAPVFVHALRVMIGMSESTWKRKIEYMKSLGWTEDEVLLTF 275

Query: 63  KRQPMSLARSEEKMRYAADFCFNTVKLDPGTVISYPMSFVYSVDKQLRPKYKVLEVLKLK 122
           KR P  LA SE+K+  A DF  NTV+L   TV++ P+   YS+DK++RP+Y VL+VL+ K
Sbjct: 276 KRNPDILACSEDKIGRAMDFFVNTVRLGSQTVVANPVLLQYSIDKRVRPRYNVLKVLESK 335

Query: 123 NLLK 127
           NL++
Sbjct: 336 NLIE 339

[Close]
BLAST of MELO3C023837 vs. TrEMBL
Match: B9GLY5_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0001s06760g PE=4 SV=2)

HSP 1 Score: 134.4 bits (337), Expect = 1.0e-28
Identity = 70/135 (51.85%), Postives = 92/135 (68.15%), Query Frame = 1 

Query: 3   KVDRMIQVVKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFTLF 62
           K DRM+  V  LK LG+EPK   F+HA +V   +S   W+KKI V+KSLGWSE EI   F
Sbjct: 185 KHDRMVYAVNALKNLGVEPKTPVFLHAAKVMLSISKSNWRKKIEVMKSLGWSEEEIIVAF 244

Query: 63  KRQPMSLARSEEKMRYAADFCFNTVKLDPGTVISYPMSFVYSVDKQLRPKYKVLEVLKLK 122
           KR P  LA SEEK+R + DF  NT+KL+P  +I+ P    YSVD++LRP++ VL+VL  K
Sbjct: 245 KRYPYLLACSEEKIRKSLDFFVNTLKLEPQAIITCPEYLSYSVDRRLRPRHNVLKVLVSK 304

Query: 123 NLLK-NKKIVRPLVR 137
            L+K ++KIVR + R
Sbjct: 305 KLVKEDEKIVRAVTR 319

[Close]
BLAST of MELO3C023837 vs. TrEMBL
Match: A0A061FRH9_THECC (Mitochondrial transcription termination factor family protein, putative isoform 1 OS=Theobroma cacao GN=TCM_044644 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 3.0e-28
Identity = 66/132 (50.00%), Postives = 90/132 (68.18%), Query Frame = 1 

Query: 1   MQKVDRMIQVVKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFT 60
           +Q  DRM+  VKT+KE+GIEPK + F+HALRV   MS   WKKK+ V  SLGWS+ E+  
Sbjct: 206 LQSHDRMVYAVKTIKEIGIEPKETRFIHALRVICSMSKSNWKKKVEVFMSLGWSKEEVLN 265

Query: 61  LFKRQPMSLARSEEKMRYAADFCFNTVKLDPGTVISYPMSFVYSVDKQLRPKYKVLEVLK 120
            FK+ P+ LA SE K+RY  DF  NT+KLD   +I+YP    YSV++++  +Y VL+ L+
Sbjct: 266 TFKKDPLCLACSENKLRYLMDFYVNTMKLDARAIIAYPKLLGYSVERRVHARYIVLKALE 325

Query: 121 LKNLLK-NKKIV 132
              L+K +KKIV
Sbjct: 326 SMKLIKDDKKIV 337

[Close]
BLAST of MELO3C023837 vs. TAIR10
Match: AT5G07900.1 (AT5G07900.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 75.5 bits (184), Expect = 2.9e-14
Identity = 42/129 (32.56%), Postives = 67/129 (51.94%), Query Frame = 1 

Query: 1   MQKVDRMIQVVKTLKELGIEPKASTFV---HALRVRGGMSDPIWKKKINVLKSLGWSENE 60
           MQK      + K  +E+G  P+ STFV   HAL  +G  S  IW K   V +  GWSE++
Sbjct: 238 MQKNHEFQAIAKQAQEMGFNPQKSTFVLAIHALSGKGNKS--IWDKCFEVYQRWGWSEDD 297

Query: 61  IFTLFKRQPMSLARSEEKMRYAADFCFNTVKLDPGTVISYPMSFVYSVDKQLRPKYKVLE 120
           I   FK+ P  +  SE K+    ++  N + + P ++   P+   +S++K++ P+  V +
Sbjct: 298 IMCAFKKHPHCMMLSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTK 357

Query: 121 VLKLKNLLK 127
           VL    L+K
Sbjct: 358 VLVSNGLVK 364

[Close]
BLAST of MELO3C023837 vs. TAIR10
Match: AT1G62010.1 (AT1G62010.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 60.1 bits (144), Expect = 1.3e-09
Identity = 28/66 (42.42%), Postives = 44/66 (66.67%), Query Frame = 1 

Query: 11  VKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFTLFKRQPMSLA 70
           +K + E+G +P  STFVHAL +   MSD   ++KI V +S+G+S ++++ +FK+ P SL 
Sbjct: 211 LKKVVEMGFDPTTSTFVHALHMLYQMSDKTIEEKIRVYRSVGFSVDDVWAMFKKWPRSLT 270

Query: 71  RSEEKM 77
            SE+K+
Sbjct: 271 HSEKKV 276

[Close]
BLAST of MELO3C023837 vs. TAIR10
Match: AT5G64950.1 (AT5G64950.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 58.5 bits (140), Expect = 3.7e-09
Identity = 30/110 (27.27%), Postives = 58/110 (52.73%), Query Frame = 1 

Query: 16  ELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFTLFKRQPMSLARSEEK 75
           +LG    +   VHA+     +S+  + +K+ +  + G+SE+EI  + +R P  +  SE+K
Sbjct: 225 DLGFTLNSRMLVHAVISLSSLSEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSEDK 284

Query: 76  MRYAADFCFNTVKLDPGTVISYPMSFVYSVDKQLRPKYKVLEVLKLKNLL 126
           +    +F    + L+   +   P    Y+++K++ P+ KVL++L+ K LL
Sbjct: 285 LTLGFEFYLKRMGLEREALAKRPCVLSYNLEKRVIPRLKVLQILREKGLL 334

[Close]
BLAST of MELO3C023837 vs. TAIR10
Match: AT1G61960.1 (AT1G61960.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 56.6 bits (135), Expect = 1.4e-08
Identity = 30/84 (35.71%), Postives = 50/84 (59.52%), Query Frame = 1 

Query: 5   DRMIQVVKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFTLFKR 64
           +R  + +K + E+G +P+ + FV ALRV   MSD   ++K+NV K LG+   +++ +FK+
Sbjct: 222 ERFEESLKKVVEMGFDPETTKFVEALRVIYRMSDKTIEEKVNVYKRLGFGVADVWAIFKK 281

Query: 65  QPMSLARSEEKMRYAADFCFNTVK 89
            P  L+ SE+K+ +     F T+K
Sbjct: 282 WPSFLSYSEKKITHT----FETLK 301


HSP 2 Score: 43.1 bits (100), Expect = 1.6e-04
Identity = 23/90 (25.56%), Postives = 41/90 (45.56%), Query Frame = 1 

Query: 45  INVLKSLGWSENEIFTLFKRQPMSLARSEEKMRYAADFCFNTVKLDPGTVISYPMSFVYS 104
           I     LG+S +E   + KR P  +  + E ++   +F    +      ++S P  F YS
Sbjct: 332 IETFLGLGFSRDEFAMMVKRYPQCIDYTAETVKKKTEFIVKNMNWPLEALVSIPQVFGYS 391

Query: 105 VDKQLRPKYKVLEVLKLKNLLKNKKIVRPL 135
           ++K+  P+  V++ L  K L+K+     P+
Sbjct: 392 LEKRTVPRCNVIKTLISKGLMKDGSEAPPM 421

[Close]
BLAST of MELO3C023837 vs. TAIR10
Match: AT1G62490.1 (AT1G62490.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 56.6 bits (135), Expect = 1.4e-08
Identity = 28/72 (38.89%), Postives = 43/72 (59.72%), Query Frame = 1 

Query: 5   DRMIQVVKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFTLFKR 64
           DR    +K + E+G +P  + FV AL V   M+D   ++K+NV K LG++  +++ +FK+
Sbjct: 227 DRFNTSLKKVVEMGFDPTTAKFVKALHVSYEMNDKTIEEKVNVYKMLGFAVEDVWVIFKK 286

Query: 65  QPMSLARSEEKM 77
            P SL  SEEK+
Sbjct: 287 WPYSLKYSEEKI 298

[Close]
BLAST of MELO3C023837 vs. NCBI nr
Match: gi|778708378|ref|XP_011656176.1| (PREDICTED: uncharacterized protein LOC105435654 [Cucumis sativus])

HSP 1 Score: 201.1 bits (510), Expect = 1.3e-48
Identity = 101/137 (73.72%), Postives = 113/137 (82.48%), Query Frame = 1 

Query: 1   MQKVDRMIQVVKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFT 60
           M+ VDRMIQ+VKT+KELG EPKA TFVHALRVRG MSD IWKKKINVLKSLGWSE EIF 
Sbjct: 202 MRTVDRMIQLVKTVKELGFEPKARTFVHALRVRGSMSDSIWKKKINVLKSLGWSEKEIFA 261

Query: 61  LFKRQPMSLARSEEKMRYAADFCFNTVKLDPGTVISYPMSFVYSVDKQLRPKYKVLEVLK 120
            FK+ P+ L  SE+KMR  ADFCFNT KLD GT+I+YP+ F  SVDK+L P YKVLEVLK
Sbjct: 262 AFKKFPLYLTCSEKKMRDVADFCFNTAKLDAGTLITYPVLFKLSVDKRLLPMYKVLEVLK 321

Query: 121 LKNLLKNKKIVRPLVRG 138
           +KNLLKNKKI R  V+G
Sbjct: 322 VKNLLKNKKIARVFVQG 338

[Close]
BLAST of MELO3C023837 vs. NCBI nr
Match: gi|778708378|ref|XP_011656176.1| (PREDICTED: uncharacterized protein LOC105435654 [Cucumis sativus])

HSP 1 Score: 190.3 bits (482), Expect = 2.3e-45
Identity = 93/137 (67.88%), Postives = 110/137 (80.29%), Query Frame = 1 

Query: 1   MQKVDRMIQVVKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFT 60
           +QK DRMI+VVKT+KELGIEPK   FV+A+  R  MSD  WK K+NV+KSLGWSENEI T
Sbjct: 606 LQKADRMIRVVKTVKELGIEPKGPMFVYAVLSRSSMSDSTWKNKVNVMKSLGWSENEILT 665

Query: 61  LFKRQPMSLARSEEKMRYAADFCFNTVKLDPGTVISYPMSFVYSVDKQLRPKYKVLEVLK 120
            FKR P  L  SEEKMR  ADFCFNT K DPGTVI+YPM F+ SV+K+L+P+YKV+EVLK
Sbjct: 666 AFKRYPRYLTCSEEKMREVADFCFNTAKFDPGTVITYPMFFMCSVEKRLQPRYKVIEVLK 725

Query: 121 LKNLLKNKKIVRPLVRG 138
           +KNLLKNKKI   L++G
Sbjct: 726 VKNLLKNKKIAWLLLQG 742


HSP 2 Score: 197.2 bits (500), Expect = 1.9e-47
Identity = 101/134 (75.37%), Postives = 111/134 (82.84%), Query Frame = 1 

Query: 1   MQKVDRMIQVVKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFT 60
           M  VDRMIQVVK +KELGIEPK++ F+HALRVR  MSD  WKKKINVLKSLGWSENEI T
Sbjct: 203 MHTVDRMIQVVKMVKELGIEPKSARFLHALRVRCAMSDSTWKKKINVLKSLGWSENEILT 262

Query: 61  LFKRQPMSLARSEEKMRYAADFCFNTVKLDPGTVISYPMSFVYSVDKQLRPKYKVLEVLK 120
           LFKRQP+ LARSEE  R  ADFCFNT KLDP TVISYP  F YSVDK L P+YKVLEVLK
Sbjct: 263 LFKRQPICLARSEEAFRDVADFCFNTAKLDPETVISYPKFFTYSVDK-LWPRYKVLEVLK 322

Query: 121 LKNLLKNKKIVRPL 135
           +KNLLK++K+ R L
Sbjct: 323 VKNLLKDRKVARAL 335

[Close]
BLAST of MELO3C023837 vs. NCBI nr
Match: gi|659090285|ref|XP_008445933.1| (PREDICTED: uncharacterized protein LOC103488812 [Cucumis melo])

HSP 1 Score: 195.3 bits (495), Expect = 7.1e-47
Identity = 99/137 (72.26%), Postives = 110/137 (80.29%), Query Frame = 1 

Query: 1   MQKVDRMIQVVKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFT 60
           MQKVDR+I  VKT+KELGIEPKA TFV+A+ VR  MSD  WKKKINV+KSLGWS+ EIFT
Sbjct: 202 MQKVDRLIPAVKTVKELGIEPKARTFVYAVVVRLSMSDSTWKKKINVMKSLGWSDKEIFT 261

Query: 61  LFKRQPMSLARSEEKMRYAADFCFNTVKLDPGTVISYPMSFVYSVDKQLRPKYKVLEVLK 120
            FKR P  L  SEEK+R  ADFCFNT KLDPGT+ISYP  F  S DK+LRP+YKVLEVLK
Sbjct: 262 AFKRHPNYLGCSEEKIRDVADFCFNTAKLDPGTLISYPKLFKLSFDKRLRPRYKVLEVLK 321

Query: 121 LKNLLKNKKIVRPLVRG 138
           +KNLLKNKKI   LV G
Sbjct: 322 VKNLLKNKKIASVLVEG 338

[Close]
BLAST of MELO3C023837 vs. NCBI nr
Match: gi|659090193|ref|XP_008445884.1| (PREDICTED: uncharacterized protein LOC103488770 [Cucumis melo])

HSP 1 Score: 193.0 bits (489), Expect = 3.5e-46
Identity = 98/136 (72.06%), Postives = 109/136 (80.15%), Query Frame = 1 

Query: 1   MQKVDRMIQVVKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFT 60
           +QKVDRMIQVVK +KELG EPK+  FV AL+ R GMSD  W KKINVLKSLGWSE EIFT
Sbjct: 202 VQKVDRMIQVVKMVKELGFEPKSGMFVDALKARIGMSDSTWNKKINVLKSLGWSEKEIFT 261

Query: 61  LFKRQPMSLARSEEKMRYAADFCFNTVKLDPGTVISYPMSFVYSVDKQLRPKYKVLEVLK 120
           LFKR P  LARSE+KMR  ADFCFNTVKL+PGTVISYPM F  S+DK+LRP+YKVLEVLK
Sbjct: 262 LFKRMPECLARSEKKMRDVADFCFNTVKLEPGTVISYPMFFKLSIDKRLRPRYKVLEVLK 321

Query: 121 LKNLLKNKKIVRPLVR 137
           +K L  N  I R L +
Sbjct: 322 VKKLPTNITIARALTQ 337

[Close]
BLAST of MELO3C023837 vs. NCBI nr
Match: gi|659090283|ref|XP_008445932.1| (PREDICTED: uncharacterized protein LOC103488811 [Cucumis melo])

HSP 1 Score: 189.5 bits (480), Expect = 3.9e-45
Identity = 94/138 (68.12%), Postives = 111/138 (80.43%), Query Frame = 1 

Query: 1   MQKVDRMIQVVKTLKELGIEPKASTFVHALRVRGGMSDPIWKKKINVLKSLGWSENEIFT 60
           MQKVDRMIQVVK +KELGIEPK   FVHA+R+RG +SD  WKKKINV+KSLGWSENEI T
Sbjct: 202 MQKVDRMIQVVKKVKELGIEPKTRKFVHAIRIRGSLSDSTWKKKINVMKSLGWSENEILT 261

Query: 61  LFKRQPMSLARSEEKMRYAADFCFNTVKLDPGTVISYPMSFVYSVDKQLRPKYKVLEVLK 120
            FK+ P  L+ SEEK+R   DFC NT KLDP TVISYP  F+ ++DK+LRP++K+LE LK
Sbjct: 262 AFKKDPNYLSCSEEKLRDVTDFCLNTAKLDPETVISYPTLFMSALDKRLRPRFKILEALK 321

Query: 121 LKNLLKNK-KIVRPLVRG 138
           +K+LLKN  KI R LVRG
Sbjct: 322 VKSLLKNNIKIPRALVRG 339

The following BLAST results are available for this feature:
BLAST of MELO3C023837 vs. TrEMBL
Match NameE-valueIdentityDescription
B9SHV1_RICCO1.4e-3048.89Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0621880 PE=4 SV=1[more]
A0A067L028_JATCU1.6e-2950.00Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24592 PE=4 SV=1[more]
B9GLU7_POPTR1.6e-2953.23Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s07180g PE=4 SV=2[more]
B9GLY5_POPTR1.0e-2851.85Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0001s06760g P... [more]
A0A061FRH9_THECC3.0e-2850.00Mitochondrial transcription termination factor family protein, putative isoform ... [more]
BLAST of MELO3C023837 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G07900.12.9e-1432.56 Mitochondrial transcription termination factor family protein[more]
AT1G62010.11.3e-0942.42 Mitochondrial transcription termination factor family protein[more]
AT5G64950.13.7e-0927.27 Mitochondrial transcription termination factor family protein[more]
AT1G61960.11.4e-0835.71 Mitochondrial transcription termination factor family protein[more]
AT1G62490.11.4e-0838.89 Mitochondrial transcription termination factor family protein[more]
BLAST of MELO3C023837 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778708378|ref|XP_011656176.1|1.3e-4873.72PREDICTED: uncharacterized protein LOC105435654 [Cucumis sativus][more]
gi|778708378|ref|XP_011656176.1|2.3e-4567.88PREDICTED: uncharacterized protein LOC105435654 [Cucumis sativus][more]
gi|659090285|ref|XP_008445933.1|7.1e-4772.26PREDICTED: uncharacterized protein LOC103488812 [Cucumis melo][more]
gi|659090193|ref|XP_008445884.1|3.5e-4672.06PREDICTED: uncharacterized protein LOC103488770 [Cucumis melo][more]
gi|659090283|ref|XP_008445932.1|3.9e-4568.12PREDICTED: uncharacterized protein LOC103488811 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003690MTERF
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003690double-stranded DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
molecular_function GO:0003690 double-stranded DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C023837T1MELO3C023837T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 35..121
score: 1.2
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 1..136
score: 6.9
NoneNo IPR availablePANTHERPTHR13068:SF20SUBFAMILY NOT NAMEDcoord: 1..136
score: 6.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C023837CSPI05G09480Wild cucumber (PI 183967)cpimeB360
MELO3C023837Cucsa.165480Cucumber (Gy14) v1cgymeB290
MELO3C023837CsGy5G006800Cucumber (Gy14) v2cgybmeB310
MELO3C023837CsaV3_5G006880Cucumber (Chinese Long) v3cucmeB370
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C023837Cucurbita moschata (Rifu)cmomeB480
MELO3C023837Cucurbita moschata (Rifu)cmomeB522
MELO3C023837Cucurbita moschata (Rifu)cmomeB577
MELO3C023837Cucurbita moschata (Rifu)cmomeB644
MELO3C023837Cucurbita moschata (Rifu)cmomeB646
MELO3C023837Wild cucumber (PI 183967)cpimeB172
MELO3C023837Wild cucumber (PI 183967)cpimeB264
MELO3C023837Wild cucumber (PI 183967)cpimeB365
MELO3C023837Wild cucumber (PI 183967)cpimeB413
MELO3C023837Cucumber (Chinese Long) v2cumeB271
MELO3C023837Cucumber (Chinese Long) v2cumeB339
MELO3C023837Cucumber (Chinese Long) v2cumeB342
MELO3C023837Cucumber (Chinese Long) v2cumeB414
MELO3C023837Watermelon (Charleston Gray)mewcgB040
MELO3C023837Watermelon (Charleston Gray)mewcgB041
MELO3C023837Watermelon (Charleston Gray)mewcgB057
MELO3C023837Watermelon (Charleston Gray)mewcgB060
MELO3C023837Watermelon (Charleston Gray)mewcgB066
MELO3C023837Watermelon (97103) v1mewmB042
MELO3C023837Watermelon (97103) v1mewmB043
MELO3C023837Watermelon (97103) v1mewmB055
MELO3C023837Watermelon (97103) v1mewmB069
MELO3C023837Watermelon (97103) v1mewmB072
MELO3C023837Cucurbita pepo (Zucchini)cpemeB246
MELO3C023837Cucurbita pepo (Zucchini)cpemeB376
MELO3C023837Cucurbita pepo (Zucchini)cpemeB378
MELO3C023837Cucurbita pepo (Zucchini)cpemeB654
MELO3C023837Bottle gourd (USVL1VR-Ls)lsimeB042
MELO3C023837Bottle gourd (USVL1VR-Ls)lsimeB122
MELO3C023837Bottle gourd (USVL1VR-Ls)lsimeB169
MELO3C023837Bottle gourd (USVL1VR-Ls)lsimeB235
MELO3C023837Bottle gourd (USVL1VR-Ls)lsimeB281
MELO3C023837Cucumber (Gy14) v2cgybmeB147
MELO3C023837Cucumber (Gy14) v2cgybmeB232
MELO3C023837Cucumber (Gy14) v2cgybmeB317
MELO3C023837Silver-seed gourdcarmeB0264
MELO3C023837Silver-seed gourdcarmeB0305
MELO3C023837Silver-seed gourdcarmeB0338
MELO3C023837Silver-seed gourdcarmeB0660
MELO3C023837Silver-seed gourdcarmeB0853
MELO3C023837Silver-seed gourdcarmeB0913
MELO3C023837Cucumber (Chinese Long) v3cucmeB174
MELO3C023837Cucumber (Chinese Long) v3cucmeB270
MELO3C023837Cucumber (Chinese Long) v3cucmeB377
MELO3C023837Cucumber (Chinese Long) v3cucmeB427
MELO3C023837Watermelon (97103) v2mewmbB058
MELO3C023837Watermelon (97103) v2mewmbB076
MELO3C023837Watermelon (97103) v2mewmbB044
MELO3C023837Watermelon (97103) v2mewmbB065
MELO3C023837Wax gourdmewgoB050
MELO3C023837Wax gourdmewgoB066
MELO3C023837Wax gourdmewgoB067
MELO3C023837Wax gourdmewgoB082
MELO3C023837Melon (DHL92) v3.5.1memeB007
MELO3C023837Melon (DHL92) v3.5.1memeB031
MELO3C023837Melon (DHL92) v3.5.1memeB034
MELO3C023837Cucumber (Gy14) v1cgymeB059
MELO3C023837Cucumber (Gy14) v1cgymeB616
MELO3C023837Cucurbita maxima (Rimu)cmameB488
MELO3C023837Cucurbita maxima (Rimu)cmameB532
MELO3C023837Cucurbita maxima (Rimu)cmameB588
MELO3C023837Cucurbita maxima (Rimu)cmameB652
MELO3C023837Cucurbita maxima (Rimu)cmameB654