MELO3C023834 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C023834
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionTumor protein 63
Locationchr10 : 6026098 .. 6026482 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCTACTCTCGAGGAAGAGGTAAAGAAGTATAAAGATGAGAGCGATAGCAGCAAAAGTGATCGTCATTGGAAGAGACCTTTGAAGAAAGTGAAGGTATCAGGCGATGATCCCGACGGAAGGGGTTCAAGTGCTTTAGGAGTCCTTGATGTTCCACCAGTGGTTTTCACATTTTCCTTTCTTGAACTTTTTTTTTTTTTTTGTTCATCTTCTTCACAAATGATTTATTAATTGTTTACTTCTGCAGTTATCTTTGAACGATCATCTTGAAAGCCTTATATAGCTAGGCAGCGATGAATCTTTGACAGGACCTCATGTAGTTGATTTGGCCATTGAAGAAGTTGCTACCTCGAAGACCCTCGTCTCTAAACCAGCCGAATAG

mRNA sequence

ATGGCTGCTACTCTCGAGGAAGAGGTAAAGAAGTATAAAGATGAGAGCGATAGCAGCAAAAGTGATCGTCATTGGAAGAGACCTTTGAAGAAAGTGAAGGTATCAGGCGATGATCCCGACGGAAGGGGTTCAAGTGCTTTAGGAGTCCTTGATGTTCCACCAGTGCTAGGCAGCGATGAATCTTTGACAGGACCTCATGTAGTTGATTTGGCCATTGAAGAAGTTGCTACCTCGAAGACCCTCGTCTCTAAACCAGCCGAATAG

Coding sequence (CDS)

ATGGCTGCTACTCTCGAGGAAGAGGTAAAGAAGTATAAAGATGAGAGCGATAGCAGCAAAAGTGATCGTCATTGGAAGAGACCTTTGAAGAAAGTGAAGGTATCAGGCGATGATCCCGACGGAAGGGGTTCAAGTGCTTTAGGAGTCCTTGATGTTCCACCAGTGCTAGGCAGCGATGAATCTTTGACAGGACCTCATGTAGTTGATTTGGCCATTGAAGAAGTTGCTACCTCGAAGACCCTCGTCTCTAAACCAGCCGAATAG

Protein sequence

MAATLEEEVKKYKDESDSSKSDRHWKRPLKKVKVSGDDPDGRGSSALGVLDVPPVLGSDESLTGPHVVDLAIEEVATSKTLVSKPAE*
Homology
[Close]
BLAST of MELO3C023834 vs. TrEMBL
Match: E5GCB9_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 3.0e-21
Identity = 60/87 (68.97%), Postives = 64/87 (73.56%), Query Frame = 1 

Query: 1   MAATLEEEVKKYKDESDSSKSDRHWKRPLKKVKVSGDDPDGRGSSALGVLDVPPVLGSDE 60
           MA  LEEEVK++KDESDSSKSDRHWKRPLKK KVSGD PD           + P   SDE
Sbjct: 344 MAPNLEEEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHPDWFARL------IEP--DSDE 403

Query: 61  SLTGPHVVDLAIEEVATSKTLVSKPAE 88
           SLTGPHVVD A EEV TSKT V+KPAE
Sbjct: 404 SLTGPHVVDSAFEEVGTSKTPVNKPAE 422

[Close]
BLAST of MELO3C023834 vs. NCBI nr
Match: gi|307136292|gb|ADN34118.1| (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 109.0 bits (271), Expect = 4.3e-21
Identity = 60/87 (68.97%), Postives = 64/87 (73.56%), Query Frame = 1 

Query: 1   MAATLEEEVKKYKDESDSSKSDRHWKRPLKKVKVSGDDPDGRGSSALGVLDVPPVLGSDE 60
           MA  LEEEVK++KDESDSSKSDRHWKRPLKK KVSGD PD           + P   SDE
Sbjct: 344 MAPNLEEEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHPDWFARL------IEP--DSDE 403

Query: 61  SLTGPHVVDLAIEEVATSKTLVSKPAE 88
           SLTGPHVVD A EEV TSKT V+KPAE
Sbjct: 404 SLTGPHVVDSAFEEVGTSKTPVNKPAE 422

The following BLAST results are available for this feature:
BLAST of MELO3C023834 vs. TrEMBL
Match NameE-valueIdentityDescription
E5GCB9_CUCME3.0e-2168.97Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
BLAST of MELO3C023834 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|307136292|gb|ADN34118.1|4.3e-2168.97hypothetical protein [Cucumis melo subsp. melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C023834T1MELO3C023834T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 2..22
scor

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C023834Watermelon (97103) v2mewmbB058
MELO3C023834Watermelon (97103) v2mewmbB076
MELO3C023834Watermelon (97103) v2mewmbB044
MELO3C023834Watermelon (97103) v2mewmbB065
MELO3C023834Wax gourdmewgoB050
MELO3C023834Wax gourdmewgoB066
MELO3C023834Wax gourdmewgoB067
MELO3C023834Wax gourdmewgoB082
MELO3C023834Melon (DHL92) v3.5.1memeB007
MELO3C023834Melon (DHL92) v3.5.1memeB031
MELO3C023834Melon (DHL92) v3.5.1memeB034
MELO3C023834Cucumber (Gy14) v1cgymeB059
MELO3C023834Cucumber (Gy14) v1cgymeB290
MELO3C023834Cucumber (Gy14) v1cgymeB616
MELO3C023834Cucurbita maxima (Rimu)cmameB488
MELO3C023834Cucurbita maxima (Rimu)cmameB532
MELO3C023834Cucurbita maxima (Rimu)cmameB588
MELO3C023834Cucurbita maxima (Rimu)cmameB652
MELO3C023834Cucurbita maxima (Rimu)cmameB654
MELO3C023834Cucurbita moschata (Rifu)cmomeB480
MELO3C023834Cucurbita moschata (Rifu)cmomeB522
MELO3C023834Cucurbita moschata (Rifu)cmomeB577
MELO3C023834Cucurbita moschata (Rifu)cmomeB644
MELO3C023834Cucurbita moschata (Rifu)cmomeB646
MELO3C023834Wild cucumber (PI 183967)cpimeB172
MELO3C023834Wild cucumber (PI 183967)cpimeB264
MELO3C023834Wild cucumber (PI 183967)cpimeB360
MELO3C023834Wild cucumber (PI 183967)cpimeB365
MELO3C023834Wild cucumber (PI 183967)cpimeB413
MELO3C023834Cucumber (Chinese Long) v2cumeB271
MELO3C023834Cucumber (Chinese Long) v2cumeB339
MELO3C023834Cucumber (Chinese Long) v2cumeB342
MELO3C023834Cucumber (Chinese Long) v2cumeB414
MELO3C023834Watermelon (Charleston Gray)mewcgB040
MELO3C023834Watermelon (Charleston Gray)mewcgB041
MELO3C023834Watermelon (Charleston Gray)mewcgB057
MELO3C023834Watermelon (Charleston Gray)mewcgB060
MELO3C023834Watermelon (Charleston Gray)mewcgB066
MELO3C023834Watermelon (97103) v1mewmB042
MELO3C023834Watermelon (97103) v1mewmB043
MELO3C023834Watermelon (97103) v1mewmB055
MELO3C023834Watermelon (97103) v1mewmB069
MELO3C023834Watermelon (97103) v1mewmB072
MELO3C023834Cucurbita pepo (Zucchini)cpemeB246
MELO3C023834Cucurbita pepo (Zucchini)cpemeB376
MELO3C023834Cucurbita pepo (Zucchini)cpemeB378
MELO3C023834Cucurbita pepo (Zucchini)cpemeB654
MELO3C023834Bottle gourd (USVL1VR-Ls)lsimeB042
MELO3C023834Bottle gourd (USVL1VR-Ls)lsimeB122
MELO3C023834Bottle gourd (USVL1VR-Ls)lsimeB169
MELO3C023834Bottle gourd (USVL1VR-Ls)lsimeB235
MELO3C023834Bottle gourd (USVL1VR-Ls)lsimeB281
MELO3C023834Cucumber (Gy14) v2cgybmeB147
MELO3C023834Cucumber (Gy14) v2cgybmeB232
MELO3C023834Cucumber (Gy14) v2cgybmeB310
MELO3C023834Cucumber (Gy14) v2cgybmeB317
MELO3C023834Silver-seed gourdcarmeB0264
MELO3C023834Silver-seed gourdcarmeB0305
MELO3C023834Silver-seed gourdcarmeB0338
MELO3C023834Silver-seed gourdcarmeB0660
MELO3C023834Silver-seed gourdcarmeB0853
MELO3C023834Silver-seed gourdcarmeB0913
MELO3C023834Cucumber (Chinese Long) v3cucmeB174
MELO3C023834Cucumber (Chinese Long) v3cucmeB270
MELO3C023834Cucumber (Chinese Long) v3cucmeB370
MELO3C023834Cucumber (Chinese Long) v3cucmeB377
MELO3C023834Cucumber (Chinese Long) v3cucmeB427