MELO3C023800 (gene) Melon (DHL92) v3.5.1

NameMELO3C023800
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionMitochondrial import receptor subunit TOM20 homolog B
Locationchr6 : 16603290 .. 16604020 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGCCACTCCTTAATACCTTCAAGGGATGAAAAGTAGAATCATATCATATTCCAATATTCCAATTCGAATTGGACGTAGTAACATCAGGGAATTCATCAAAATAATCGTTACCGAAGGCTCACCGTGACCCGGAGTGGAGTAAGGAAGGCTTAGGTGGCTTGGTAAAACAAGGAGCTCGGCTCGACTCGAAGGCGTTCGGCTCGGCTCGGCTCGGCTCGCGGCTTGGCTCAACTCGGCTCGCGGCTCGGCTCACTCGGCTCGCGGCTCAGCTCGCCCGGCTCATTCGGCTCGGCTCACTCGGCTCACTCGGCTCGGACTGGGATTGCTGGCGGCTCGCGGCTGGGATTGTTGGCGGCTCGCGGCTGGAATTGGGTCTCGGGTCGGGTACGGCTCGGGTTCAATCCCTTCTCTTCCGACGGCGACGGCGGTCGAAGGCGGAGACGAAAGAAAGGTTCGTCGGTCGAAGGCAGAGACAAAAAGAGAGAGAGGAACGCCGGGGATGGCAGCTTGTGGGGTCGCACGGCCGTTCGCGGGCGGAAGACTTTGAGTGTCGAGTCGGGATTCGTTGGTGGTGTGCGGCTACGAAGACGGCGGCGAAGAAACTGAAGAGAAGAAGAAGAAGAAGAAGTGGTGGCGTCGGGCGTGGGAGAAGAGAAATGGACGAAGGAGAACGAAGAGGAAGCAAACGCTGGCGGCGGCGCGAGGAGAAGAAGAAGAAGAAGAAATGA

mRNA sequence

ATGCGCCACTCCTTAATACCTTCAAGGGATGAAAATAAGGAAGGCTTAGGTGGCTTGGTAAAACAAGGAGCTCGGCTCGACTCGAAGGCGTTCGGCTCGGCTCGGCTCGGCTCGCGGCTTGGCTCAACTCGGCTCGCGGCTCGGCTCACTCGGCTCGCGGCTCAGCTCGCCCGGCTCATTCGGCTCGGCTCACTCGGCTCACTCGGCTCGGACTGGGATTGCTGGCGGCTCGCGGCTGGGATTGTTGGCGGCTCGCGGCTGGAATTGGGTCTCGGGTCGGGTACGGCTCGGGTTCAATCCCTTCTCTTCCGACGGCGACGGCGGTCGAAGGCGGAGACGAAAGAAAGGTTCGTCGGTCGAAGGCAGAGACAAAAAGAGAGAGAGGAACGCCGGGGATGGCAGCTTGTGGGGTCGCACGGCCGTTCGCGGGCGGAAGACTTTGAGTGTCGAGTCGGGATTCGTTGGTGGTGTGCGGCTACGAAGACGGCGGCGAAGAAACTGAAGAGAAGAAGAAGAAGAAGAAGTGGTGGCGTCGGGCGTGGGAGAAGAGAAATGGACGAAGGAGAACGAAGAGGAAGCAAACGCTGGCGGCGGCGCGAGGAGAAGAAGAAGAAGAAGAAATGA

Coding sequence (CDS)

ATGCGCCACTCCTTAATACCTTCAAGGGATGAAAATAAGGAAGGCTTAGGTGGCTTGGTAAAACAAGGAGCTCGGCTCGACTCGAAGGCGTTCGGCTCGGCTCGGCTCGGCTCGCGGCTTGGCTCAACTCGGCTCGCGGCTCGGCTCACTCGGCTCGCGGCTCAGCTCGCCCGGCTCATTCGGCTCGGCTCACTCGGCTCACTCGGCTCGGACTGGGATTGCTGGCGGCTCGCGGCTGGGATTGTTGGCGGCTCGCGGCTGGAATTGGGTCTCGGGTCGGGTACGGCTCGGGTTCAATCCCTTCTCTTCCGACGGCGACGGCGGTCGAAGGCGGAGACGAAAGAAAGGTTCGTCGGTCGAAGGCAGAGACAAAAAGAGAGAGAGGAACGCCGGGGATGGCAGCTTGTGGGGTCGCACGGCCGTTCGCGGGCGGAAGACTTTGAGTGTCGAGTCGGGATTCGTTGGTGGTGTGCGGCTACGAAGACGGCGGCGAAGAAACTGAAGAGAAGAAGAAGAAGAAGAAGTGGTGGCGTCGGGCGTGGGAGAAGAGAAATGGACGAAGGAGAACGAAGAGGAAGCAAACGCTGGCGGCGGCGCGAGGAGAAGAAGAAGAAGAAGAAATGA

Protein sequence

MRHSLIPSRDENKEGLGGLVKQGARLDSKAFGSARLGSRLGSTRLAARLTRLAAQLARLIRLGSLGSLGSDWDCWRLAAGIVGGSRLELGLGSGTARVQSLLFRRRRRSKAETKERFVGRRQRQKEREERRGWQLVGSHGRSRAEDFECRVGIRWWCAATKTAAKKLKRRRRRRSGGVGRGRREMDEGERRGSKRWRRREEKKKKKK*
BLAST of MELO3C023800 vs. TrEMBL
Match: V8NFZ3_OPHHA (Histone-lysine N-methyltransferase, H3 lysine-79 specific (Fragment) OS=Ophiophagus hannah GN=dotA PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 4.9e-06
Identity = 38/105 (36.19%), Postives = 58/105 (55.24%), Query Frame = 1

Query: 103 FRRRRRSKAETKERFVGRRQRQKEREERRGWQLVGSHGRSR-AEDFECRVGIRWWCAATK 162
           +R+RRR K E + R  G  +R+KERE RR  + +G     R   + E R G R      +
Sbjct: 506 WRKRRRKKREGERR--GEERRRKERERRRKRKGMGRREEKRMGREGEERRGGRGEREGER 565

Query: 163 TAAKKLKRRRRRRSGGVGRGRREMDEGERRGSKRWRRREEKKKKK 207
              ++++RRRR+     G+ RR  DEGE+  + R R+ EE +K+K
Sbjct: 566 ERKRRIRRRRRKEERKDGKERRRKDEGEKEKTGRMRKEEEGEKEK 608

BLAST of MELO3C023800 vs. TrEMBL
Match: V8NFZ3_OPHHA (Histone-lysine N-methyltransferase, H3 lysine-79 specific (Fragment) OS=Ophiophagus hannah GN=dotA PE=4 SV=1)

HSP 1 Score: 43.1 bits (100), Expect = 4.7e-01
Identity = 35/110 (31.82%), Postives = 52/110 (47.27%), Query Frame = 1

Query: 105 RRRRSKAETKERFVGRRQRQKEREERRGWQLVGSHGRSRAEDF-ECRVGIRWWCAATKTA 164
           RRRR K E K+   G+ +R+K+  E+         GR R E+  E       W    K  
Sbjct: 570 RRRRRKEERKD---GKERRRKDEGEKE------KTGRMRKEEEGEKEKAKEGWEGEEKEE 629

Query: 165 AKKLKRRRRRRSGGVGR--------GRREMDEGERRGSKRWRRREEKKKK 206
             K +RRRR++     R        G+ E  EGER+  K  RR+EE++++
Sbjct: 630 KGKGRRRRRKKKDQKERRRKEERWEGKEEEKEGERKDGKERRRKEEEEEE 670


HSP 2 Score: 37.7 bits (86), Expect = 2.0e+01
Identity = 34/123 (27.64%), Postives = 51/123 (41.46%), Query Frame = 1

Query: 92  GSGTARVQSLLF-------RRRRRSKAETKERFVGRRQRQKEREERRGWQLVGSHGRSRA 151
           G  T R+  L         R +R+ K   KE    +R+R+K   ERRG +      R R 
Sbjct: 473 GGNTGRIGKLTLEEEEEERRSKRKKKKYGKETRWRKRRRKKREGERRGEE------RRRK 532

Query: 152 EDFECRVGIRWWCAATKTAAKKLKRRRRRRSGGVGRGRREMDEGERRGSKRWRRREEKKK 208
           E               +   K + RR  +R G  G  RR    GER G +  +RR  +++
Sbjct: 533 E------------RERRRKRKGMGRREEKRMGREGEERRG-GRGEREGERERKRRIRRRR 576


HSP 3 Score: 37.4 bits (85), Expect = 2.6e+01
Identity = 32/109 (29.36%), Postives = 48/109 (44.04%), Query Frame = 1

Query: 104 RRRRRSKAETKERFVGRRQRQKEREE-----RRGWQLVGSHGRSRAEDFECRVGIRWWCA 163
           R   R    TKE  +G R+ +  +EE       GW L G       ++ E R G R    
Sbjct: 122 REEGRKDNGTKE--MGGRKNEGRKEEWMDGWMDGWILEGRRWEEGRKEKEGREGWR---- 181

Query: 164 ATKTAAKKLKRRRRRRSGGVGRGRREMDEGERRGSKRWRRREEKKKKKK 208
             +   KK   +  R++G +  G +E +  E RG K    REE+K+ +K
Sbjct: 182 RKEREGKKGDGKEGRQAGWMDNGEKEGERKEMRGRKNEEGREERKEGEK 224

BLAST of MELO3C023800 vs. NCBI nr
Match: gi|565306539|gb|ETE61204.1| (Histone-lysine N-methyltransferase, H3 lysine-79 specific, partial [Ophiophagus hannah])

HSP 1 Score: 59.7 bits (143), Expect = 7.0e-06
Identity = 38/105 (36.19%), Postives = 58/105 (55.24%), Query Frame = 1

Query: 103 FRRRRRSKAETKERFVGRRQRQKEREERRGWQLVGSHGRSR-AEDFECRVGIRWWCAATK 162
           +R+RRR K E + R  G  +R+KERE RR  + +G     R   + E R G R      +
Sbjct: 506 WRKRRRKKREGERR--GEERRRKERERRRKRKGMGRREEKRMGREGEERRGGRGEREGER 565

Query: 163 TAAKKLKRRRRRRSGGVGRGRREMDEGERRGSKRWRRREEKKKKK 207
              ++++RRRR+     G+ RR  DEGE+  + R R+ EE +K+K
Sbjct: 566 ERKRRIRRRRRKEERKDGKERRRKDEGEKEKTGRMRKEEEGEKEK 608

BLAST of MELO3C023800 vs. NCBI nr
Match: gi|565306539|gb|ETE61204.1| (Histone-lysine N-methyltransferase, H3 lysine-79 specific, partial [Ophiophagus hannah])

HSP 1 Score: 43.1 bits (100), Expect = 6.8e-01
Identity = 35/110 (31.82%), Postives = 52/110 (47.27%), Query Frame = 1

Query: 105 RRRRSKAETKERFVGRRQRQKEREERRGWQLVGSHGRSRAEDF-ECRVGIRWWCAATKTA 164
           RRRR K E K+   G+ +R+K+  E+         GR R E+  E       W    K  
Sbjct: 570 RRRRRKEERKD---GKERRRKDEGEKE------KTGRMRKEEEGEKEKAKEGWEGEEKEE 629

Query: 165 AKKLKRRRRRRSGGVGR--------GRREMDEGERRGSKRWRRREEKKKK 206
             K +RRRR++     R        G+ E  EGER+  K  RR+EE++++
Sbjct: 630 KGKGRRRRRKKKDQKERRRKEERWEGKEEEKEGERKDGKERRRKEEEEEE 670


HSP 2 Score: 37.7 bits (86), Expect = 2.9e+01
Identity = 34/123 (27.64%), Postives = 51/123 (41.46%), Query Frame = 1

Query: 92  GSGTARVQSLLF-------RRRRRSKAETKERFVGRRQRQKEREERRGWQLVGSHGRSRA 151
           G  T R+  L         R +R+ K   KE    +R+R+K   ERRG +      R R 
Sbjct: 473 GGNTGRIGKLTLEEEEEERRSKRKKKKYGKETRWRKRRRKKREGERRGEE------RRRK 532

Query: 152 EDFECRVGIRWWCAATKTAAKKLKRRRRRRSGGVGRGRREMDEGERRGSKRWRRREEKKK 208
           E               +   K + RR  +R G  G  RR    GER G +  +RR  +++
Sbjct: 533 E------------RERRRKRKGMGRREEKRMGREGEERRG-GRGEREGERERKRRIRRRR 576

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
V8NFZ3_OPHHA4.9e-0636.19Histone-lysine N-methyltransferase, H3 lysine-79 specific (Fragment) OS=Ophiopha... [more]
V8NFZ3_OPHHA4.7e-0131.82Histone-lysine N-methyltransferase, H3 lysine-79 specific (Fragment) OS=Ophiopha... [more]
Match NameE-valueIdentityDescription
gi|565306539|gb|ETE61204.1|7.0e-0636.19Histone-lysine N-methyltransferase, H3 lysine-79 specific, partial [Ophiophagus ... [more]
gi|565306539|gb|ETE61204.1|6.8e-0131.82Histone-lysine N-methyltransferase, H3 lysine-79 specific, partial [Ophiophagus ... [more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C023800T1MELO3C023800T1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None