MELO3C023756 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C023756
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
Description30S ribosomal protein S7, putative
Locationchr6 : 17901772 .. 17902110 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAACGACTTCCAATTTCTCTCTAATTCTAAGTTATATGCGGGGGGCTTGGATGGTGAGCAAAAAGAGTTGATCAAGAAGTTGGTCGACTTTTGCATGAAAAAAGGTAAAAGAACAAGAGTTCATGCTATTGTTTATCAAACTTTGAATCACCAAGCTCAAACTAAACGAGATGGAATCAAATTCATGGTTGAGGTCCCAGAGAATATAAAGACCATATGTGAAGTCAAAAAGGTAGGAGTAGCAGGTACTATTTATGATATCCCTGGGATTGTAGCTAGGGATCGTCAACAAACCTTTGCTATTCATTGGATCCTTGAAGCAGCTTTCAAATGA

mRNA sequence

ATGGAAAACGACTTCCAATTTCTCTCTAATTCTAAGTTATATGCGGGGGGCTTGGATGGTGAGCAAAAAGAGTTGATCAAGAAGTTGGTCGACTTTTGCATGAAAAAAGGTAAAAGAACAAGAGTTCATGCTATTGTTTATCAAACTTTGAATCACCAAGCTCAAACTAAACGAGATGGAATCAAATTCATGGTTGAGGTCCCAGAGAATATAAAGACCATATGTGAAGTCAAAAAGGTAGGAGTAGCAGGTACTATTTATGATATCCCTGGGATTGTAGCTAGGGATCGTCAACAAACCTTTGCTATTCATTGGATCCTTGAAGCAGCTTTCAAATGA

Coding sequence (CDS)

ATGGAAAACGACTTCCAATTTCTCTCTAATTCTAAGTTATATGCGGGGGGCTTGGATGGTGAGCAAAAAGAGTTGATCAAGAAGTTGGTCGACTTTTGCATGAAAAAAGGTAAAAGAACAAGAGTTCATGCTATTGTTTATCAAACTTTGAATCACCAAGCTCAAACTAAACGAGATGGAATCAAATTCATGGTTGAGGTCCCAGAGAATATAAAGACCATATGTGAAGTCAAAAAGGTAGGAGTAGCAGGTACTATTTATGATATCCCTGGGATTGTAGCTAGGGATCGTCAACAAACCTTTGCTATTCATTGGATCCTTGAAGCAGCTTTCAAATGA

Protein sequence

MENDFQFLSNSKLYAGGLDGEQKELIKKLVDFCMKKGKRTRVHAIVYQTLNHQAQTKRDGIKFMVEVPENIKTICEVKKVGVAGTIYDIPGIVARDRQQTFAIHWILEAAFK*
Homology
[Close]
BLAST of MELO3C023756 vs. Swiss-Prot
Match: RT07_ARATH (Ribosomal protein S7, mitochondrial OS=Arabidopsis thaliana GN=RPS7 PE=2 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 1.3e-35
Identity = 76/97 (78.35%), Postives = 81/97 (83.51%), Query Frame = 1 

Query: 16  GGLDGEQKELIKKLVDFCMKKGKRTRVHAIVYQTLNHQAQTKRDGIKFMVEVPENIKTIC 75
           GGLDGEQK LIKKLV+F MK+GKRTRV AIVYQT +  A+T+RD IK MV+  ENIK IC
Sbjct: 2   GGLDGEQKLLIKKLVNFRMKEGKRTRVRAIVYQTFHRPARTERDVIKLMVDAVENIKPIC 61

Query: 76  EVKKVGVAGTIYDIPGIVARDRQQTFAIHWILEAAFK 113
           EV KVGVAGTIYD+PGIVARDRQQT AI WILEAAFK
Sbjct: 62  EVAKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFK 98

[Close]
BLAST of MELO3C023756 vs. Swiss-Prot
Match: RT07_BETVU (Ribosomal protein S7, mitochondrial OS=Beta vulgaris GN=RPS7 PE=2 SV=2)

HSP 1 Score: 141.4 bits (355), Expect = 6.3e-33
Identity = 70/97 (72.16%), Postives = 80/97 (82.47%), Query Frame = 1 

Query: 16  GGLDGEQKELIKKLVDFCMKKGKRTRVHAIVYQTLNHQAQTKRDGIKFMVEVPENIKTIC 75
           GGLD EQK+LIKKLV+F MK+GKRT+V AIVYQT +  A+T+ D IK M++  ENIK IC
Sbjct: 2   GGLDSEQKQLIKKLVNFHMKEGKRTKVRAIVYQTFHRLARTEGDVIKLMIDAVENIKPIC 61

Query: 76  EVKKVGVAGTIYDIPGIVARDRQQTFAIHWILEAAFK 113
           +V+KV VAGTIYD+PGIVARDRQQT AI WILEAAFK
Sbjct: 62  KVEKVRVAGTIYDVPGIVARDRQQTLAIRWILEAAFK 98

[Close]
BLAST of MELO3C023756 vs. Swiss-Prot
Match: RT07_WHEAT (Ribosomal protein S7, mitochondrial OS=Triticum aestivum GN=RPS7 PE=3 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 3.1e-32
Identity = 71/97 (73.20%), Postives = 77/97 (79.38%), Query Frame = 1 

Query: 16  GGLDGEQKELIKKLVDFCMKKGKRTRVHAIVYQTLNHQAQTKRDGIKFMVEVPENIKTIC 75
           G  DGEQKELIKKLV+F M  GKRTRV AIVY+T +  A+T+RD IK MV+  +NIK IC
Sbjct: 2   GDFDGEQKELIKKLVNFRMIDGKRTRVRAIVYKTFHRLARTERDVIKLMVDAVDNIKPIC 61

Query: 76  EVKKVGVAGTIYDIPGIVARDRQQTFAIHWILEAAFK 113
           EV KVGVAGTIYD+PGIVARDRQQT AI WIL AAFK
Sbjct: 62  EVVKVGVAGTIYDVPGIVARDRQQTLAIRWILGAAFK 98

[Close]
BLAST of MELO3C023756 vs. Swiss-Prot
Match: RT07_MARPO (Ribosomal protein S7, mitochondrial OS=Marchantia polymorpha GN=RPS7 PE=3 SV=2)

HSP 1 Score: 103.2 bits (256), Expect = 1.9e-21
Identity = 53/99 (53.54%), Postives = 67/99 (67.68%), Query Frame = 1 

Query: 14  YAGGLDGEQKELIKKLVDFCMKKGKRTRVHAIVYQTLNHQAQTKRDGIKFMVEVPENIKT 73
           Y  GL+G+QK+LIKKLV  CM  GK+TR  AIVY+T  H+     D IK +V   EN+K 
Sbjct: 82  YIRGLNGKQKQLIKKLVHICMIDGKKTRSRAIVYKTF-HRLAPHGDVIKLLVNAIENVKP 141

Query: 74  ICEVKKVGVAGTIYDIPGIVARDRQQTFAIHWILEAAFK 113
           ICEVKKV ++GT   +P I+A +RQ+T AI W+LE+A K
Sbjct: 142 ICEVKKVRISGTTRLVPSIIATNRQETLAIRWMLESAAK 179

[Close]
BLAST of MELO3C023756 vs. Swiss-Prot
Match: RS7_HALHL (30S ribosomal protein S7 OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=rpsG PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.1e-08
Identity = 34/89 (38.20%), Postives = 44/89 (49.44%), Query Frame = 1 

Query: 24  ELIKKLVDFCMKKGKRTRVHAIVYQTLNHQAQTKRDGIKFMVEVPENIKTICEVKKVGVA 83
           E++ K V+  M  GKR+    I+Y  L        D I+ M    EN+K   EVK   V 
Sbjct: 21  EVLTKFVNMVMSDGKRSVAERILYGALERIGSKHDDPIEVMETALENVKPRVEVKSRRVG 80

Query: 84  GTIYDIPGIVARDRQQTFAIHWILEAAFK 113
           G  Y +P  V  +R+QT A+ W+LEAA K
Sbjct: 81  GATYQVPVEVRPERRQTLAMRWLLEAARK 109

[Close]
BLAST of MELO3C023756 vs. TrEMBL
Match: G3EU25_CUCME (Ribosomal protein S7 OS=Cucumis melo subsp. melo GN=rps7 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 8.5e-37
Identity = 81/97 (83.51%), Postives = 86/97 (88.66%), Query Frame = 1 

Query: 16  GGLDGEQKELIKKLVDFCMKKGKRTRVHAIVYQTLNHQAQTKRDGIKFMVEVPENIKTIC 75
           GGLDGEQKELIKKLV+F MK+GKRTRV AIVYQTLN  AQT+ DGIK MVE  ENIK IC
Sbjct: 2   GGLDGEQKELIKKLVNFRMKEGKRTRVRAIVYQTLNRPAQTEGDGIKLMVEAVENIKPIC 61

Query: 76  EVKKVGVAGTIYDIPGIVARDRQQTFAIHWILEAAFK 113
           EV+KVGVAGTIYD+PGIVARDRQQT AI WILEAAFK
Sbjct: 62  EVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFK 98

[Close]
BLAST of MELO3C023756 vs. TrEMBL
Match: G3EIX5_CUCSA (Ribosomal protein S7 OS=Cucumis sativus GN=rps7 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 3.6e-35
Identity = 78/97 (80.41%), Postives = 84/97 (86.60%), Query Frame = 1 

Query: 16  GGLDGEQKELIKKLVDFCMKKGKRTRVHAIVYQTLNHQAQTKRDGIKFMVEVPENIKTIC 75
           GGLDGEQKELIKKLV+F MK+GKRTRV AI+YQTLN  AQT+RDGIK MVE  ENIK IC
Sbjct: 2   GGLDGEQKELIKKLVNFRMKEGKRTRVRAILYQTLNRPAQTERDGIKLMVEAVENIKPIC 61

Query: 76  EVKKVGVAGTIYDIPGIVARDRQQTFAIHWILEAAFK 113
           EV+KV VA T YD+PGIVARDRQQT AI WILEAAFK
Sbjct: 62  EVEKVRVAATFYDVPGIVARDRQQTLAIRWILEAAFK 98

[Close]
BLAST of MELO3C023756 vs. TrEMBL
Match: A0A0M4R6T5_CANSA (Ribosomal protein S7 OS=Cannabis sativa GN=rps7 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 7.9e-35
Identity = 77/97 (79.38%), Postives = 85/97 (87.63%), Query Frame = 1 

Query: 16  GGLDGEQKELIKKLVDFCMKKGKRTRVHAIVYQTLNHQAQTKRDGIKFMVEVPENIKTIC 75
           GGLDGEQK+LIKKLV+F MK+GKRTRV AIVYQT +  AQT+RD IK MV+  ENIK IC
Sbjct: 2   GGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPIC 61

Query: 76  EVKKVGVAGTIYDIPGIVARDRQQTFAIHWILEAAFK 113
           EV+KVGVAGTIYD+PGIVARDRQQT AI WILEAAFK
Sbjct: 62  EVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFK 98

[Close]
BLAST of MELO3C023756 vs. TrEMBL
Match: A0A142BZ01_ZIZJJ (Ribosomal protein S7 OS=Ziziphus jujuba GN=rps7 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 7.9e-35
Identity = 77/97 (79.38%), Postives = 85/97 (87.63%), Query Frame = 1 

Query: 16  GGLDGEQKELIKKLVDFCMKKGKRTRVHAIVYQTLNHQAQTKRDGIKFMVEVPENIKTIC 75
           GGLDGEQK+LIKKLV+F MK+GKRTRV AIVYQT +  AQT+RD IK MV+  ENIK IC
Sbjct: 2   GGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPIC 61

Query: 76  EVKKVGVAGTIYDIPGIVARDRQQTFAIHWILEAAFK 113
           EV+KVGVAGTIYD+PGIVARDRQQT AI WILEAAFK
Sbjct: 62  EVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFK 98

[Close]
BLAST of MELO3C023756 vs. TrEMBL
Match: D5I3C7_CITLA (Ribosomal protein S7 OS=Citrullus lanatus GN=rps7 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.0e-34
Identity = 77/97 (79.38%), Postives = 85/97 (87.63%), Query Frame = 1 

Query: 16  GGLDGEQKELIKKLVDFCMKKGKRTRVHAIVYQTLNHQAQTKRDGIKFMVEVPENIKTIC 75
           GGLDGEQK+LIKKLV+F MK+GKRTRV AIVYQT +  AQT+RD IK MV+  ENIK IC
Sbjct: 2   GGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRLAQTERDVIKLMVDAVENIKPIC 61

Query: 76  EVKKVGVAGTIYDIPGIVARDRQQTFAIHWILEAAFK 113
           EV+KVGVAGTIYD+PGIVARDRQQT AI WILEAAFK
Sbjct: 62  EVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFK 98

[Close]
BLAST of MELO3C023756 vs. TAIR10
Match: AT2G07696.1 (AT2G07696.1 Ribosomal protein S7p/S5e family protein)

HSP 1 Score: 150.2 bits (378), Expect = 7.6e-37
Identity = 76/97 (78.35%), Postives = 81/97 (83.51%), Query Frame = 1 

Query: 16  GGLDGEQKELIKKLVDFCMKKGKRTRVHAIVYQTLNHQAQTKRDGIKFMVEVPENIKTIC 75
           GGLDGEQK LIKKLV+F MK+GKRTRV AIVYQT +  A+T+RD IK MV+  ENIK IC
Sbjct: 2   GGLDGEQKLLIKKLVNFRMKEGKRTRVRAIVYQTFHRPARTERDVIKLMVDAVENIKPIC 61

Query: 76  EVKKVGVAGTIYDIPGIVARDRQQTFAIHWILEAAFK 113
           EV KVGVAGTIYD+PGIVARDRQQT AI WILEAAFK
Sbjct: 62  EVAKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFK 98

[Close]
BLAST of MELO3C023756 vs. TAIR10
Match: ATMG01270.1 (ATMG01270.1 mitochondrial ribosomal protein S7)

HSP 1 Score: 150.2 bits (378), Expect = 7.6e-37
Identity = 76/97 (78.35%), Postives = 81/97 (83.51%), Query Frame = 1 

Query: 16  GGLDGEQKELIKKLVDFCMKKGKRTRVHAIVYQTLNHQAQTKRDGIKFMVEVPENIKTIC 75
           GGLDGEQK LIKKLV+F MK+GKRTRV AIVYQT +  A+T+RD IK MV+  ENIK IC
Sbjct: 2   GGLDGEQKLLIKKLVNFRMKEGKRTRVRAIVYQTFHRPARTERDVIKLMVDAVENIKPIC 61

Query: 76  EVKKVGVAGTIYDIPGIVARDRQQTFAIHWILEAAFK 113
           EV KVGVAGTIYD+PGIVARDRQQT AI WILEAAFK
Sbjct: 62  EVAKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFK 98

[Close]
BLAST of MELO3C023756 vs. NCBI nr
Match: gi|345034423|gb|AEN56109.1| (ribosomal protein S7 [Cucumis melo subsp. melo])

HSP 1 Score: 161.0 bits (406), Expect = 1.2e-36
Identity = 81/97 (83.51%), Postives = 86/97 (88.66%), Query Frame = 1 

Query: 16  GGLDGEQKELIKKLVDFCMKKGKRTRVHAIVYQTLNHQAQTKRDGIKFMVEVPENIKTIC 75
           GGLDGEQKELIKKLV+F MK+GKRTRV AIVYQTLN  AQT+ DGIK MVE  ENIK IC
Sbjct: 2   GGLDGEQKELIKKLVNFRMKEGKRTRVRAIVYQTLNRPAQTEGDGIKLMVEAVENIKPIC 61

Query: 76  EVKKVGVAGTIYDIPGIVARDRQQTFAIHWILEAAFK 113
           EV+KVGVAGTIYD+PGIVARDRQQT AI WILEAAFK
Sbjct: 62  EVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFK 98

[Close]
BLAST of MELO3C023756 vs. NCBI nr
Match: gi|346683361|ref|YP_004849323.1| (ribosomal protein S7 [Cucumis sativus])

HSP 1 Score: 155.6 bits (392), Expect = 5.1e-35
Identity = 78/97 (80.41%), Postives = 84/97 (86.60%), Query Frame = 1 

Query: 16  GGLDGEQKELIKKLVDFCMKKGKRTRVHAIVYQTLNHQAQTKRDGIKFMVEVPENIKTIC 75
           GGLDGEQKELIKKLV+F MK+GKRTRV AI+YQTLN  AQT+RDGIK MVE  ENIK IC
Sbjct: 2   GGLDGEQKELIKKLVNFRMKEGKRTRVRAILYQTLNRPAQTERDGIKLMVEAVENIKPIC 61

Query: 76  EVKKVGVAGTIYDIPGIVARDRQQTFAIHWILEAAFK 113
           EV+KV VA T YD+PGIVARDRQQT AI WILEAAFK
Sbjct: 62  EVEKVRVAATFYDVPGIVARDRQQTLAIRWILEAAFK 98

[Close]
BLAST of MELO3C023756 vs. NCBI nr
Match: gi|1016880331|ref|YP_009243658.1| (ribosomal protein S7 (mitochondrion) [Cannabis sativa])

HSP 1 Score: 154.5 bits (389), Expect = 1.1e-34
Identity = 77/97 (79.38%), Postives = 85/97 (87.63%), Query Frame = 1 

Query: 16  GGLDGEQKELIKKLVDFCMKKGKRTRVHAIVYQTLNHQAQTKRDGIKFMVEVPENIKTIC 75
           GGLDGEQK+LIKKLV+F MK+GKRTRV AIVYQT +  AQT+RD IK MV+  ENIK IC
Sbjct: 2   GGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPIC 61

Query: 76  EVKKVGVAGTIYDIPGIVARDRQQTFAIHWILEAAFK 113
           EV+KVGVAGTIYD+PGIVARDRQQT AI WILEAAFK
Sbjct: 62  EVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFK 98

[Close]
BLAST of MELO3C023756 vs. NCBI nr
Match: gi|1016470801|ref|YP_009241662.1| (ribosomal protein S7 (mitochondrion) [Ziziphus jujuba])

HSP 1 Score: 154.5 bits (389), Expect = 1.1e-34
Identity = 77/97 (79.38%), Postives = 85/97 (87.63%), Query Frame = 1 

Query: 16  GGLDGEQKELIKKLVDFCMKKGKRTRVHAIVYQTLNHQAQTKRDGIKFMVEVPENIKTIC 75
           GGLDGEQK+LIKKLV+F MK+GKRTRV AIVYQT +  AQT+RD IK MV+  ENIK IC
Sbjct: 2   GGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPIC 61

Query: 76  EVKKVGVAGTIYDIPGIVARDRQQTFAIHWILEAAFK 113
           EV+KVGVAGTIYD+PGIVARDRQQT AI WILEAAFK
Sbjct: 62  EVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFK 98

[Close]
BLAST of MELO3C023756 vs. NCBI nr
Match: gi|295311664|ref|YP_003587257.1| (ribosomal protein S7 [Citrullus lanatus])

HSP 1 Score: 154.1 bits (388), Expect = 1.5e-34
Identity = 77/97 (79.38%), Postives = 85/97 (87.63%), Query Frame = 1 

Query: 16  GGLDGEQKELIKKLVDFCMKKGKRTRVHAIVYQTLNHQAQTKRDGIKFMVEVPENIKTIC 75
           GGLDGEQK+LIKKLV+F MK+GKRTRV AIVYQT +  AQT+RD IK MV+  ENIK IC
Sbjct: 2   GGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRLAQTERDVIKLMVDAVENIKPIC 61

Query: 76  EVKKVGVAGTIYDIPGIVARDRQQTFAIHWILEAAFK 113
           EV+KVGVAGTIYD+PGIVARDRQQT AI WILEAAFK
Sbjct: 62  EVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFK 98

The following BLAST results are available for this feature:
BLAST of MELO3C023756 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RT07_ARATH1.3e-3578.35Ribosomal protein S7, mitochondrial OS=Arabidopsis thaliana GN=RPS7 PE=2 SV=1[more]
RT07_BETVU6.3e-3372.16Ribosomal protein S7, mitochondrial OS=Beta vulgaris GN=RPS7 PE=2 SV=2[more]
RT07_WHEAT3.1e-3273.20Ribosomal protein S7, mitochondrial OS=Triticum aestivum GN=RPS7 PE=3 SV=1[more]
RT07_MARPO1.9e-2153.54Ribosomal protein S7, mitochondrial OS=Marchantia polymorpha GN=RPS7 PE=3 SV=2[more]
RS7_HALHL1.1e-0838.2030S ribosomal protein S7 OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=r... [more]
BLAST of MELO3C023756 vs. TrEMBL
Match NameE-valueIdentityDescription
G3EU25_CUCME8.5e-3783.51Ribosomal protein S7 OS=Cucumis melo subsp. melo GN=rps7 PE=4 SV=1[more]
G3EIX5_CUCSA3.6e-3580.41Ribosomal protein S7 OS=Cucumis sativus GN=rps7 PE=4 SV=1[more]
A0A0M4R6T5_CANSA7.9e-3579.38Ribosomal protein S7 OS=Cannabis sativa GN=rps7 PE=4 SV=1[more]
A0A142BZ01_ZIZJJ7.9e-3579.38Ribosomal protein S7 OS=Ziziphus jujuba GN=rps7 PE=4 SV=1[more]
D5I3C7_CITLA1.0e-3479.38Ribosomal protein S7 OS=Citrullus lanatus GN=rps7 PE=4 SV=1[more]
BLAST of MELO3C023756 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G07696.17.6e-3778.35 Ribosomal protein S7p/S5e family protein[more]
ATMG01270.17.6e-3778.35ATMG01270.1 mitochondrial ribosomal protein S7[more]
BLAST of MELO3C023756 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|345034423|gb|AEN56109.1|1.2e-3683.51ribosomal protein S7 [Cucumis melo subsp. melo][more]
gi|346683361|ref|YP_004849323.1|5.1e-3580.41ribosomal protein S7 [Cucumis sativus][more]
gi|1016880331|ref|YP_009243658.1|1.1e-3479.38ribosomal protein S7 (mitochondrion) [Cannabis sativa][more]
gi|1016470801|ref|YP_009241662.1|1.1e-3479.38ribosomal protein S7 (mitochondrion) [Ziziphus jujuba][more]
gi|295311664|ref|YP_003587257.1|1.5e-3479.38ribosomal protein S7 [Citrullus lanatus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000235Ribosomal_S5/S7
IPR020606Ribosomal_S7_CS
IPR023798Ribosomal_S7_dom
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003735structural constituent of ribosome
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005739 mitochondrion
cellular_component GO:0015935 small ribosomal subunit
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU48537melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C023756T1MELO3C023756T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU48537MU48537transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000235Ribosomal protein S5/S7PIRPIRSF002122RPS7p_RPS7a_RPS5e_RPS7ocoord: 7..112
score: 4.8
IPR000235Ribosomal protein S5/S7PANTHERPTHR11205RIBOSOMAL PROTEIN S7coord: 24..112
score: 9.6
IPR020606Ribosomal protein S7, conserved sitePROSITEPS00052RIBOSOMAL_S7coord: 23..49
scor
IPR023798Ribosomal protein S7 domainGENE3DG3DSA:1.10.455.10coord: 21..111
score: 1.9
IPR023798Ribosomal protein S7 domainPFAMPF00177Ribosomal_S7coord: 22..110
score: 2.5
IPR023798Ribosomal protein S7 domainunknownSSF47973Ribosomal protein S7coord: 21..112
score: 7.59
NoneNo IPR availablePANTHERPTHR11205:SF23RIBOSOMAL PROTEIN S7, MITOCHONDRIALcoord: 24..112
score: 9.6

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C023756Silver-seed gourdcarmeB0485
MELO3C023756Silver-seed gourdcarmeB0757
MELO3C023756Cucumber (Chinese Long) v3cucmeB249
MELO3C023756Watermelon (97103) v2mewmbB434
MELO3C023756Wax gourdmewgoB542
MELO3C023756Cucumber (Gy14) v1cgymeB003
MELO3C023756Cucurbita maxima (Rimu)cmameB243
MELO3C023756Cucurbita maxima (Rimu)cmameB431
MELO3C023756Cucurbita moschata (Rifu)cmomeB231
MELO3C023756Cucurbita moschata (Rifu)cmomeB421
MELO3C023756Wild cucumber (PI 183967)cpimeB243
MELO3C023756Cucumber (Chinese Long) v2cumeB161
MELO3C023756Watermelon (Charleston Gray)mewcgB427
MELO3C023756Watermelon (97103) v1mewmB463
MELO3C023756Cucurbita pepo (Zucchini)cpemeB529
MELO3C023756Cucurbita pepo (Zucchini)cpemeB586
MELO3C023756Bottle gourd (USVL1VR-Ls)lsimeB368
MELO3C023756Cucumber (Gy14) v2cgybmeB212