MELO3C023755 (gene) Melon (DHL92) v3.5.1

NameMELO3C023755
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionNADH-ubiquinone oxidoreductase chain 1
Locationchr6 : 17906005 .. 17906321 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAGGATGAGTCCTCTGATCCTAACATCATTTATGAGGAGTTGGATGATGAAGCCTCCTTCTCAAATAAAGATATCTCTGATGCAACTGGCAAGAACCAATCTATTGTGATTTTTGGGTTCGGTCAGGTAATAGAAGCTAAGGAGAGATGCTTTTCCATCAGTCAAAAGCAGGTATCGCCCCTCATGCTCCCTCAGTCCGCTTACCAAGGATTAGAAAGAGAAGAACTGGAGGCAGAGCTAGTTGGGGTAAAGAGTCGTAAGTGCGGTAGGGGTAAGAGAGGACGTGCTCGTAAGGTTCAAAGAAGGGTATGA

mRNA sequence

ATGGAAAGGATGAGTCCTCTGATCCTAACATCATTTATGAGGAGTTGGATGATGAAGCCTCCTTCTCAAATAAAGATATCTCTGATGCAACTGGCAAGAACCAATCTATTGTGATTTTTGGGTTCGGTCAGGTAATAGAAGCTAAGGAGAGATGCTTTTCCATCAGTCAAAAGCAGGTATCGCCCCTCATGCTCCCTCAGTCCGCTTACCAAGGATTAGAAAGAGAAGAACTGGAGGCAGAGCTAGTTGGGGTAAAGAGTCGTAAGTGCGGTAGGGGTAAGAGAGGACGTGCTCGTAAGGTTCAAAGAAGGGTATGA

Coding sequence (CDS)

ATGGAAAGGATGAGTCCTCTGATCCTAACATCATTTATGAGGAGTTGGATGATGAAGCCTCCTTCTCAAATAAAGATATCTCTGATGCAACTGGCAAGAACCAATCTATTGTGATTTTTGGGTTCGGTCAGGTAATAGAAGCTAAGGAGAGATGCTTTTCCATCAGTCAAAAGCAGGTATCGCCCCTCATGCTCCCTCAGTCCGCTTACCAAGGATTAGAAAGAGAAGAACTGGAGGCAGAGCTAGTTGGGGTAAAGAGTCGTAAGTGCGGTAGGGGTAAGAGAGGACGTGCTCGTAAGGTTCAAAGAAGGGTATGA

Protein sequence

GKDESSDPNIIYEELDDEASFSNKDISDATGKNQSIVIFGFGQVIEAKERCFSISQKQVSPLMLPQSAYQGLEREELEAELVGVKSRKCGRGKRGRARKVQRRV*
BLAST of MELO3C023755 vs. Swiss-Prot
Match: M1130_ARATH (Uncharacterized mitochondrial protein AtMg01130 OS=Arabidopsis thaliana GN=AtMg01130 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.3e-08
Identity = 37/68 (54.41%), Postives = 43/68 (63.24%), Query Frame = 1

Query: 13 EELDDEASFSNKDISDAT---GKNQSIVIFGFGQVIEAKERCFSISQK-QVSPLMLPQSA 72
          +E DDEAS S+KD+SDAT       SIVIF  G V   K    SISQK  +SP MLP+ A
Sbjct: 32 DEPDDEASSSDKDVSDATLPARTTYSIVIFLAGSVRRDKREMLSISQKGTLSPAMLPRPA 91

Query: 73 YQGLEREE 77
          Y+G+ERE+
Sbjct: 92 YRGIERED 99

BLAST of MELO3C023755 vs. TrEMBL
Match: M1BGV2_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400017419 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.2e-15
Identity = 51/89 (57.30%), Postives = 62/89 (69.66%), Query Frame = 1

Query: 2   KDESSDPNIIYEELDDEASFSNKDISDAT---GKNQSIVIFGFGQVIEAKERCFSISQKQ 61
           KDE +DPNIIYEE DDEAS S+KD+SDAT    +  SIVIF    V   K    SISQKQ
Sbjct: 51  KDEPADPNIIYEEPDDEASSSDKDVSDATLPARRTFSIVIFLASSVRRDKREMLSISQKQ 110

Query: 62  VSPLMLPQSAYQGLEREELEAELVGVKSR 88
           +SP MLP+SAY+G+ER++   E VG+  R
Sbjct: 111 ISPPMLPRSAYRGIERKDPGPEQVGLGYR 139

BLAST of MELO3C023755 vs. TrEMBL
Match: W9SL15_9ROSA (Putative mitochondrial protein OS=Morus notabilis GN=L484_006112 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.8e-12
Identity = 50/102 (49.02%), Postives = 63/102 (61.76%), Query Frame = 1

Query: 2   KDESSDPNIIYEELDDEASFSNKDISDATGKNQSIVIFGFGQVIEAKERCFSISQKQVSP 61
           +DE +DPNIIYEE +DEAS S+KD+SDA     SIVIF    V   K    SISQK + P
Sbjct: 136 EDEPADPNIIYEEPNDEASSSDKDVSDAARTTFSIVIFLADSVRRDKREMLSISQKWIPP 195

Query: 62  LMLPQSAYQGLEREELEAELVGVKSRKCG--RGKRGRARKVQ 102
              P+SA +G+E+E L  E VG+  R      G RGRAR+ +
Sbjct: 196 --QPRSAPRGIEKENLGPEQVGLGYRAVSVVGGDRGRARQAE 235

BLAST of MELO3C023755 vs. TrEMBL
Match: A0A124SB01_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_008925 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 5.3e-09
Identity = 47/103 (45.63%), Postives = 63/103 (61.17%), Query Frame = 1

Query: 2   KDESSDPNIIYEELDDEASFSNKDISDAT---GKNQSIVIFGFGQVIE--AKERCFSISQ 61
           +D+ + PNIIYEE DDEAS S+KD+SDAT    K  SI IF F +V     KERCF   +
Sbjct: 34  EDDPAHPNIIYEEPDDEASSSDKDVSDATLPAIKTLSIYIFVFWRVRXGGTKERCFLSVK 93

Query: 62  KQVSPLMLPQSAYQGLEREELEAELV--GVKSRKCGRGKRGRA 98
            +  P ML +SAY+ +ER++   E V  G ++     G +GRA
Sbjct: 94  IRYPPPMLLRSAYRRIERKDPGPEQVXLGYRAVSAVGGDKGRA 136

BLAST of MELO3C023755 vs. TrEMBL
Match: B9TAM6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_2130530 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.0e-08
Identity = 45/94 (47.87%), Postives = 56/94 (59.57%), Query Frame = 1

Query: 13  EELDDEASFSNKDISDATGKNQ---SIVIFGFGQVIEAKERCFSISQKQVSPLMLPQSAY 72
           EE  DEAS S+KD+SDAT   +   SIVIF  G V   K   F  S+   +P MLPQSAY
Sbjct: 11  EEPVDEASSSDKDVSDATLSARTTFSIVIFLAGSVRRDKREIFYQSKADTAPPMLPQSAY 70

Query: 73  QGLEREELEAELVGVKSRKCGR--GKRGRARKVQ 102
           +G+ERE+   E VG+  R      G RGRAR ++
Sbjct: 71  RGIEREDPGPEQVGLGYRAVSAMGGDRGRARALR 104

BLAST of MELO3C023755 vs. TAIR10
Match: ATMG01130.1 (ATMG01130.1 hypothetical protein)

HSP 1 Score: 60.5 bits (145), Expect = 7.3e-10
Identity = 37/68 (54.41%), Postives = 43/68 (63.24%), Query Frame = 1

Query: 13 EELDDEASFSNKDISDAT---GKNQSIVIFGFGQVIEAKERCFSISQK-QVSPLMLPQSA 72
          +E DDEAS S+KD+SDAT       SIVIF  G V   K    SISQK  +SP MLP+ A
Sbjct: 32 DEPDDEASSSDKDVSDATLPARTTYSIVIFLAGSVRRDKREMLSISQKGTLSPAMLPRPA 91

Query: 73 YQGLEREE 77
          Y+G+ERE+
Sbjct: 92 YRGIERED 99

BLAST of MELO3C023755 vs. NCBI nr
Match: gi|703160136|ref|XP_010112427.1| (putative mitochondrial protein [Morus notabilis])

HSP 1 Score: 80.1 bits (196), Expect = 2.5e-12
Identity = 50/102 (49.02%), Postives = 63/102 (61.76%), Query Frame = 1

Query: 2   KDESSDPNIIYEELDDEASFSNKDISDATGKNQSIVIFGFGQVIEAKERCFSISQKQVSP 61
           +DE +DPNIIYEE +DEAS S+KD+SDA     SIVIF    V   K    SISQK + P
Sbjct: 136 EDEPADPNIIYEEPNDEASSSDKDVSDAARTTFSIVIFLADSVRRDKREMLSISQKWIPP 195

Query: 62  LMLPQSAYQGLEREELEAELVGVKSRKCG--RGKRGRARKVQ 102
              P+SA +G+E+E L  E VG+  R      G RGRAR+ +
Sbjct: 196 --QPRSAPRGIEKENLGPEQVGLGYRAVSVVGGDRGRARQAE 235

BLAST of MELO3C023755 vs. NCBI nr
Match: gi|976900942|gb|KVH89095.1| (hypothetical protein Ccrd_008925 [Cynara cardunculus var. scolymus])

HSP 1 Score: 68.6 bits (166), Expect = 7.6e-09
Identity = 47/103 (45.63%), Postives = 63/103 (61.17%), Query Frame = 1

Query: 2   KDESSDPNIIYEELDDEASFSNKDISDAT---GKNQSIVIFGFGQVIE--AKERCFSISQ 61
           +D+ + PNIIYEE DDEAS S+KD+SDAT    K  SI IF F +V     KERCF   +
Sbjct: 34  EDDPAHPNIIYEEPDDEASSSDKDVSDATLPAIKTLSIYIFVFWRVRXGGTKERCFLSVK 93

Query: 62  KQVSPLMLPQSAYQGLEREELEAELV--GVKSRKCGRGKRGRA 98
            +  P ML +SAY+ +ER++   E V  G ++     G +GRA
Sbjct: 94  IRYPPPMLLRSAYRRIERKDPGPEQVXLGYRAVSAVGGDKGRA 136

BLAST of MELO3C023755 vs. NCBI nr
Match: gi|223523525|gb|EEF27089.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 66.6 bits (161), Expect = 2.9e-08
Identity = 45/94 (47.87%), Postives = 56/94 (59.57%), Query Frame = 1

Query: 13  EELDDEASFSNKDISDATGKNQ---SIVIFGFGQVIEAKERCFSISQKQVSPLMLPQSAY 72
           EE  DEAS S+KD+SDAT   +   SIVIF  G V   K   F  S+   +P MLPQSAY
Sbjct: 11  EEPVDEASSSDKDVSDATLSARTTFSIVIFLAGSVRRDKREIFYQSKADTAPPMLPQSAY 70

Query: 73  QGLEREELEAELVGVKSRKCGR--GKRGRARKVQ 102
           +G+ERE+   E VG+  R      G RGRAR ++
Sbjct: 71  RGIEREDPGPEQVGLGYRAVSAMGGDRGRARALR 104

BLAST of MELO3C023755 vs. NCBI nr
Match: gi|13449384|ref|NP_085566.1| (hypothetical protein ArthMp044 [Arabidopsis thaliana])

HSP 1 Score: 60.5 bits (145), Expect = 2.1e-06
Identity = 37/68 (54.41%), Postives = 45/68 (66.18%), Query Frame = 1

Query: 13 EELDDEASFSNKDISDAT---GKNQSIVIFGFGQVIEAKERCFSISQK-QVSPLMLPQSA 72
          +E DDEAS S+KD+SDAT       SIVIF  G V   K    SISQK  +SP MLP+ A
Sbjct: 32 DEPDDEASSSDKDVSDATLPARTTYSIVIFLAGSVRRDKREMLSISQKGTLSPAMLPRPA 91

Query: 73 YQGLEREE 77
          Y+G+ERE+
Sbjct: 92 YRGIERED 99

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
M1130_ARATH1.3e-0854.41Uncharacterized mitochondrial protein AtMg01130 OS=Arabidopsis thaliana GN=AtMg0... [more]
Match NameE-valueIdentityDescription
M1BGV2_SOLTU2.2e-1557.30Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400017419 PE=4 SV=1[more]
W9SL15_9ROSA1.8e-1249.02Putative mitochondrial protein OS=Morus notabilis GN=L484_006112 PE=4 SV=1[more]
A0A124SB01_CYNCS5.3e-0945.63Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_008925 PE=3 ... [more]
B9TAM6_RICCO2.0e-0847.87Putative uncharacterized protein OS=Ricinus communis GN=RCOM_2130530 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
ATMG01130.17.3e-1054.41ATMG01130.1 hypothetical protein[more]
Match NameE-valueIdentityDescription
gi|703160136|ref|XP_010112427.1|2.5e-1249.02putative mitochondrial protein [Morus notabilis][more]
gi|976900942|gb|KVH89095.1|7.6e-0945.63hypothetical protein Ccrd_008925 [Cynara cardunculus var. scolymus][more]
gi|223523525|gb|EEF27089.1|2.9e-0847.87conserved hypothetical protein [Ricinus communis][more]
gi|13449384|ref|NP_085566.1|2.1e-0654.41hypothetical protein ArthMp044 [Arabidopsis thaliana][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C023755T1MELO3C023755T1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None