MELO3C023739 (gene) Melon (DHL92) v3.5.1

NameMELO3C023739
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionPutative voltage-gated potassium channel subunit beta
Locationchr6 : 18269511 .. 18270924 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGTTCGGCGAACAAAACTCTCTGTTTCAGTCATTTCACCTCCTTGACCAAGCTTTCGATGCCGGCATCAACTTCTTCGACTCCGCAGAAATGTATTTTGGTCTCGCTCTCTTCTTCTAGCTCATTCTATGATGCCTACATTTCTCACTACTATAGAATTCCATTTCTGGGAGTTCATGTTTTATTCCAACTATATGTAACCGGTTCTATTTGTAGGTATCCAGTGCCTCAACGTTCTGAGACTCAGGGCCGGAGTGAGGAGTACCTTGGCCATTGGATCAGAAGCCGAAAAATTACTCGGGACCGTATTGTTTTAGCTTCAAAGGTTCGTCTCTCTCTGTGCGCGTGTGTTTCCCGTATCGCTATATTTCTGCAATTTTCCAAGACTACCTTGGCTTATATTTTGCTGTTTCGCTCATTATTTGTTGATTTTGCTTTTGTAACCTTCCTTTTGCGAATGTAAAGGCCTAAGGATTGTGCGCTATCGAGCTGTTACGTAGAGCTCATATTTCTTTTGTAGTTTTCTTTTAGTTAATATACTACTAACGCTGTTAAGAATAGTTTAGCTAGTTCGGCTTGAGTTTTTCTAAAAGTTATGTACTTAATAGCTCAAAGAATAGGTAGAGAGATTGTATGATCTCTCTGACATTTTTCATTACGTATTATTTTAGTAGCAGTTGCAGGACAAATAGGTAGATAAAGATTGTATAATCACACTGACATTTTTATTAAATAACATATTGGGTCATTAGTGAACATGTTCCTGAATGAGTTTAGTAGAAAGTGCAATAATCATATTGAATAAGAAAATTGGGTCTCGAAAAAAAGGAAAATTTTGAATATAGTTTTATTATGGCGTGAACAATTAGCAAAAGGAGAAATGGTCTCATGGAAGTGAACAGGCTGAGTGACACTGGACTTTTTGATGAGAAGGTTATAACAAAAATATACATTATAATCAAGGGTATAGCCAACAAAAACATCTTGAGAAGTTCTAGGCTTAAGATTATGCTTATTATGAAGAGCCTTCGAAAGTTTTAACAAGGATTTGCAGGTTATCATAGTCTACAGTTCAAACAAGCCAGTCGGGCAAGGTTGATCTAATTATATATATGAAGTATTTATTTTTTAAATGAATCTTGCTGGTAGAATTATAAAGAATTTCCAAGCTACAAATTATCTGATTATTTTCCCTCTTGGTTAGGTTGCTTTGGTTTTTGAAATGGCCAACATAAATTCGATTTCTAACTTAAAATTGATTGCATCTTGGAACTTTTATGCTGAGATAAATTTCTGATACAATCTGCAGGTTGCCGGACCATCTGGGCAAATGACTTGGATACGAGGCGGACCAAAGTGTTTGGATACTAAGAATATTACAGAAGCAATTGATGCTAGGTCTATAGTGTGA

mRNA sequence

ATGACGTTCGGCGAACAAAACTCTCTGTTTCAGTCATTTCACCTCCTTGACCAAGCTTTCGATGCCGGCATCAACTTCTTCGACTCCGCAGAAATGTATCCAGTGCCTCAACGTTCTGAGACTCAGGGCCGGAGTGAGGAGTACCTTGGCCATTGGATCAGAAGCCGAAAAATTACTCGGGACCGTATTGTTTTAGCTTCAAAGGTTGCCGGACCATCTGGGCAAATGACTTGGATACGAGGCGGACCAAAGTGTTTGGATACTAAGAATATTACAGAAGCAATTGATGCTAGGTCTATAGTGTGA

Coding sequence (CDS)

ATGACGTTCGGCGAACAAAACTCTCTGTTTCAGTCATTTCACCTCCTTGACCAAGCTTTCGATGCCGGCATCAACTTCTTCGACTCCGCAGAAATGTATCCAGTGCCTCAACGTTCTGAGACTCAGGGCCGGAGTGAGGAGTACCTTGGCCATTGGATCAGAAGCCGAAAAATTACTCGGGACCGTATTGTTTTAGCTTCAAAGGTTGCCGGACCATCTGGGCAAATGACTTGGATACGAGGCGGACCAAAGTGTTTGGATACTAAGAATATTACAGAAGCAATTGATGCTAGGTCTATAGTGTGA

Protein sequence

MTFGEQNSLFQSFHLLDQAFDAGINFFDSAEMYPVPQRSETQGRSEEYLGHWIRSRKITRDRIVLASKVAGPSGQMTWIRGGPKCLDTKNITEAIDARSIV*
BLAST of MELO3C023739 vs. Swiss-Prot
Match: TAS_ECOLI (Protein tas OS=Escherichia coli (strain K12) GN=tas PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 4.8e-16
Identity = 46/95 (48.42%), Postives = 60/95 (63.16%), Query Frame = 1

Query: 1   MTFGEQNSLFQSFHLLDQAFDAGINFFDSAEMYPVPQRSETQGRSEEYLGHWIRSRKITR 60
           MTFGEQNS   +   LD A   GIN  D AEMYPVP R ETQG +E Y+G+W+ ++  +R
Sbjct: 21  MTFGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWL-AKHGSR 80

Query: 61  DRIVLASKVAGPSGQMTWIRGGPKCLDTKNITEAI 96
           +++++ASKV+GPS          + LD KNI EA+
Sbjct: 81  EKLIIASKVSGPSRNNDKGIRPDQALDRKNIREAL 114

BLAST of MELO3C023739 vs. Swiss-Prot
Match: TAS_SHIFL (Protein tas OS=Shigella flexneri GN=tas PE=3 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 4.8e-16
Identity = 46/95 (48.42%), Postives = 60/95 (63.16%), Query Frame = 1

Query: 1   MTFGEQNSLFQSFHLLDQAFDAGINFFDSAEMYPVPQRSETQGRSEEYLGHWIRSRKITR 60
           MTFGEQNS   +   LD A   GIN  D AEMYPVP R ETQG +E Y+G+W+ ++  +R
Sbjct: 21  MTFGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWL-AKHGSR 80

Query: 61  DRIVLASKVAGPSGQMTWIRGGPKCLDTKNITEAI 96
           +++++ASKV+GPS          + LD KNI EA+
Sbjct: 81  EKLIIASKVSGPSRNNDKGIRPDQALDRKNIREAL 114

BLAST of MELO3C023739 vs. TrEMBL
Match: A0A0A0LAL1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G257070 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 2.8e-47
Identity = 94/97 (96.91%), Postives = 95/97 (97.94%), Query Frame = 1

Query: 1   MTFGEQNSLFQSFHLLDQAFDAGINFFDSAEMYPVPQRSETQGRSEEYLGHWIRSRKITR 60
           MTFGEQNSLFQSFHLLDQAFDAGINFFDSAEMYPVPQRSETQGRSEEYLGHWIRSRKI R
Sbjct: 22  MTFGEQNSLFQSFHLLDQAFDAGINFFDSAEMYPVPQRSETQGRSEEYLGHWIRSRKIAR 81

Query: 61  DRIVLASKVAGPSGQMTWIRGGPKCLDTKNITEAIDA 98
           DRIVLA+KVAGPSGQMTWIR GPKCLDTKNITEAIDA
Sbjct: 82  DRIVLATKVAGPSGQMTWIRDGPKCLDTKNITEAIDA 118

BLAST of MELO3C023739 vs. TrEMBL
Match: B9IE88_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s04190g PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 5.1e-41
Identity = 83/97 (85.57%), Postives = 92/97 (94.85%), Query Frame = 1

Query: 1   MTFGEQNSLFQSFHLLDQAFDAGINFFDSAEMYPVPQRSETQGRSEEYLGHWIRSRKITR 60
           MTFGEQNSL QSF LLD+AF+AGINFFDSAEMYPVPQR+ETQGRSEEYLG WI+ RKI R
Sbjct: 22  MTFGEQNSLPQSFGLLDEAFNAGINFFDSAEMYPVPQRAETQGRSEEYLGRWIKRRKIPR 81

Query: 61  DRIVLASKVAGPSGQMTWIRGGPKCLDTKNITEAIDA 98
           DRIVLA+KVAGPSGQMTWIRGGPKCLD++NIT+AID+
Sbjct: 82  DRIVLATKVAGPSGQMTWIRGGPKCLDSRNITDAIDS 118

BLAST of MELO3C023739 vs. TrEMBL
Match: A0A0B0MWV3_GOSAR (Protein tas OS=Gossypium arboreum GN=F383_29685 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.7e-40
Identity = 79/96 (82.29%), Postives = 88/96 (91.67%), Query Frame = 1

Query: 1   MTFGEQNSLFQSFHLLDQAFDAGINFFDSAEMYPVPQRSETQGRSEEYLGHWIRSRKITR 60
           MTFGEQNSL QS  LLDQAFDAGINFFDSAEMYPVPQR+ETQG+SEEY G W+R RKI+R
Sbjct: 22  MTFGEQNSLPQSLRLLDQAFDAGINFFDSAEMYPVPQRAETQGKSEEYFGQWVRKRKISR 81

Query: 61  DRIVLASKVAGPSGQMTWIRGGPKCLDTKNITEAID 97
           DR+V+A+KVAGPSGQM+WIR GPKCLD KNITEA+D
Sbjct: 82  DRVVIATKVAGPSGQMSWIRDGPKCLDAKNITEAVD 117

BLAST of MELO3C023739 vs. TrEMBL
Match: A0A0D2SJE6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G132600 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.3e-39
Identity = 78/96 (81.25%), Postives = 88/96 (91.67%), Query Frame = 1

Query: 1   MTFGEQNSLFQSFHLLDQAFDAGINFFDSAEMYPVPQRSETQGRSEEYLGHWIRSRKITR 60
           MTFGEQNSL Q+  LLDQAFDAGINFFDSAEMYPVPQR+ETQG+SEEY G W+R RKI+R
Sbjct: 22  MTFGEQNSLPQTLRLLDQAFDAGINFFDSAEMYPVPQRAETQGKSEEYFGQWVRKRKISR 81

Query: 61  DRIVLASKVAGPSGQMTWIRGGPKCLDTKNITEAID 97
           DR+V+A+KVAGPSGQM+WIR GPKCLD KNITEA+D
Sbjct: 82  DRVVIATKVAGPSGQMSWIRDGPKCLDAKNITEAVD 117

BLAST of MELO3C023739 vs. TrEMBL
Match: A0A0D2QS35_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G132600 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.3e-39
Identity = 78/96 (81.25%), Postives = 88/96 (91.67%), Query Frame = 1

Query: 1   MTFGEQNSLFQSFHLLDQAFDAGINFFDSAEMYPVPQRSETQGRSEEYLGHWIRSRKITR 60
           MTFGEQNSL Q+  LLDQAFDAGINFFDSAEMYPVPQR+ETQG+SEEY G W+R RKI+R
Sbjct: 22  MTFGEQNSLPQTLRLLDQAFDAGINFFDSAEMYPVPQRAETQGKSEEYFGQWVRKRKISR 81

Query: 61  DRIVLASKVAGPSGQMTWIRGGPKCLDTKNITEAID 97
           DR+V+A+KVAGPSGQM+WIR GPKCLD KNITEA+D
Sbjct: 82  DRVVIATKVAGPSGQMSWIRDGPKCLDAKNITEAVD 117

BLAST of MELO3C023739 vs. TAIR10
Match: AT1G04420.1 (AT1G04420.1 NAD(P)-linked oxidoreductase superfamily protein)

HSP 1 Score: 85.5 bits (210), Expect = 2.1e-17
Identity = 43/98 (43.88%), Postives = 64/98 (65.31%), Query Frame = 1

Query: 1   MTFGEQNSLFQSFHLLDQAFDAGINFFDSAEMYPVPQRSETQGRSEEYLGHWIRSRKITR 60
           MTFGEQN+  +S  +L  A + GIN  D+AE YP+P + ETQG+++ Y+  W++S++  R
Sbjct: 76  MTFGEQNTEKESHEMLSYAIEEGINCIDTAEAYPIPMKKETQGKTDLYISSWLKSQQ--R 135

Query: 61  DRIVLASKVAGPSGQMTWIRGGPKCL--DTKNITEAID 97
           D+IVLA+KV G S +  +IR   + L  D  NI E+++
Sbjct: 136 DKIVLATKVCGYSERSAYIRDSGEILRVDAANIKESVE 171

BLAST of MELO3C023739 vs. NCBI nr
Match: gi|659123212|ref|XP_008461551.1| (PREDICTED: aldo-keto reductase-like isoform X3 [Cucumis melo])

HSP 1 Score: 201.4 bits (511), Expect = 7.3e-49
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1

Query: 1   MTFGEQNSLFQSFHLLDQAFDAGINFFDSAEMYPVPQRSETQGRSEEYLGHWIRSRKITR 60
           MTFGEQNSLFQSFHLLDQAFDAGINFFDSAEMYPVPQRSETQGRSEEYLGHWIRSRKITR
Sbjct: 22  MTFGEQNSLFQSFHLLDQAFDAGINFFDSAEMYPVPQRSETQGRSEEYLGHWIRSRKITR 81

Query: 61  DRIVLASKVAGPSGQMTWIRGGPKCLDTKNITEAIDA 98
           DRIVLASKVAGPSGQMTWIRGGPKCLDTKNITEAIDA
Sbjct: 82  DRIVLASKVAGPSGQMTWIRGGPKCLDTKNITEAIDA 118

BLAST of MELO3C023739 vs. NCBI nr
Match: gi|659123210|ref|XP_008461549.1| (PREDICTED: aldo-keto reductase-like isoform X2 [Cucumis melo])

HSP 1 Score: 201.4 bits (511), Expect = 7.3e-49
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1

Query: 1  MTFGEQNSLFQSFHLLDQAFDAGINFFDSAEMYPVPQRSETQGRSEEYLGHWIRSRKITR 60
          MTFGEQNSLFQSFHLLDQAFDAGINFFDSAEMYPVPQRSETQGRSEEYLGHWIRSRKITR
Sbjct: 1  MTFGEQNSLFQSFHLLDQAFDAGINFFDSAEMYPVPQRSETQGRSEEYLGHWIRSRKITR 60

Query: 61 DRIVLASKVAGPSGQMTWIRGGPKCLDTKNITEAIDA 98
          DRIVLASKVAGPSGQMTWIRGGPKCLDTKNITEAIDA
Sbjct: 61 DRIVLASKVAGPSGQMTWIRGGPKCLDTKNITEAIDA 97

BLAST of MELO3C023739 vs. NCBI nr
Match: gi|659123208|ref|XP_008461548.1| (PREDICTED: aldo-keto reductase-like isoform X1 [Cucumis melo])

HSP 1 Score: 201.4 bits (511), Expect = 7.3e-49
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1

Query: 1   MTFGEQNSLFQSFHLLDQAFDAGINFFDSAEMYPVPQRSETQGRSEEYLGHWIRSRKITR 60
           MTFGEQNSLFQSFHLLDQAFDAGINFFDSAEMYPVPQRSETQGRSEEYLGHWIRSRKITR
Sbjct: 22  MTFGEQNSLFQSFHLLDQAFDAGINFFDSAEMYPVPQRSETQGRSEEYLGHWIRSRKITR 81

Query: 61  DRIVLASKVAGPSGQMTWIRGGPKCLDTKNITEAIDA 98
           DRIVLASKVAGPSGQMTWIRGGPKCLDTKNITEAIDA
Sbjct: 82  DRIVLASKVAGPSGQMTWIRGGPKCLDTKNITEAIDA 118

BLAST of MELO3C023739 vs. NCBI nr
Match: gi|778680571|ref|XP_011651348.1| (PREDICTED: aldo-keto reductase isoform X1 [Cucumis sativus])

HSP 1 Score: 195.7 bits (496), Expect = 4.0e-47
Identity = 94/97 (96.91%), Postives = 95/97 (97.94%), Query Frame = 1

Query: 1   MTFGEQNSLFQSFHLLDQAFDAGINFFDSAEMYPVPQRSETQGRSEEYLGHWIRSRKITR 60
           MTFGEQNSLFQSFHLLDQAFDAGINFFDSAEMYPVPQRSETQGRSEEYLGHWIRSRKI R
Sbjct: 22  MTFGEQNSLFQSFHLLDQAFDAGINFFDSAEMYPVPQRSETQGRSEEYLGHWIRSRKIAR 81

Query: 61  DRIVLASKVAGPSGQMTWIRGGPKCLDTKNITEAIDA 98
           DRIVLA+KVAGPSGQMTWIR GPKCLDTKNITEAIDA
Sbjct: 82  DRIVLATKVAGPSGQMTWIRDGPKCLDTKNITEAIDA 118

BLAST of MELO3C023739 vs. NCBI nr
Match: gi|778680577|ref|XP_011651350.1| (PREDICTED: aldo-keto reductase isoform X3 [Cucumis sativus])

HSP 1 Score: 195.7 bits (496), Expect = 4.0e-47
Identity = 94/97 (96.91%), Postives = 95/97 (97.94%), Query Frame = 1

Query: 1   MTFGEQNSLFQSFHLLDQAFDAGINFFDSAEMYPVPQRSETQGRSEEYLGHWIRSRKITR 60
           MTFGEQNSLFQSFHLLDQAFDAGINFFDSAEMYPVPQRSETQGRSEEYLGHWIRSRKI R
Sbjct: 22  MTFGEQNSLFQSFHLLDQAFDAGINFFDSAEMYPVPQRSETQGRSEEYLGHWIRSRKIAR 81

Query: 61  DRIVLASKVAGPSGQMTWIRGGPKCLDTKNITEAIDA 98
           DRIVLA+KVAGPSGQMTWIR GPKCLDTKNITEAIDA
Sbjct: 82  DRIVLATKVAGPSGQMTWIRDGPKCLDTKNITEAIDA 118

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TAS_ECOLI4.8e-1648.42Protein tas OS=Escherichia coli (strain K12) GN=tas PE=1 SV=1[more]
TAS_SHIFL4.8e-1648.42Protein tas OS=Shigella flexneri GN=tas PE=3 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LAL1_CUCSA2.8e-4796.91Uncharacterized protein OS=Cucumis sativus GN=Csa_3G257070 PE=4 SV=1[more]
B9IE88_POPTR5.1e-4185.57Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s04190g PE=4 SV=1[more]
A0A0B0MWV3_GOSAR5.7e-4082.29Protein tas OS=Gossypium arboreum GN=F383_29685 PE=4 SV=1[more]
A0A0D2SJE6_GOSRA1.3e-3981.25Uncharacterized protein OS=Gossypium raimondii GN=B456_007G132600 PE=4 SV=1[more]
A0A0D2QS35_GOSRA1.3e-3981.25Uncharacterized protein OS=Gossypium raimondii GN=B456_007G132600 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G04420.12.1e-1743.88 NAD(P)-linked oxidoreductase superfamily protein[more]
Match NameE-valueIdentityDescription
gi|659123212|ref|XP_008461551.1|7.3e-49100.00PREDICTED: aldo-keto reductase-like isoform X3 [Cucumis melo][more]
gi|659123210|ref|XP_008461549.1|7.3e-49100.00PREDICTED: aldo-keto reductase-like isoform X2 [Cucumis melo][more]
gi|659123208|ref|XP_008461548.1|7.3e-49100.00PREDICTED: aldo-keto reductase-like isoform X1 [Cucumis melo][more]
gi|778680571|ref|XP_011651348.1|4.0e-4796.91PREDICTED: aldo-keto reductase isoform X1 [Cucumis sativus][more]
gi|778680577|ref|XP_011651350.1|4.0e-4796.91PREDICTED: aldo-keto reductase isoform X3 [Cucumis sativus][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001395Aldo/keto reductase/potassium channel subunit beta
IPR023210NADP_OxRdtase_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016491 oxidoreductase activity
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU58262melon EST collection version 4.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C023739T1MELO3C023739T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU58262MU58262transcribed_cluster


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001395Aldo/keto reductase/potassium channel subunit betaPANTHERPTHR11732ALDO/KETO REDUCTASEcoord: 2..97
score: 8.2
IPR023210NADP-dependent oxidoreductase domainGENE3DG3DSA:3.20.20.100coord: 1..97
score: 8.0
IPR023210NADP-dependent oxidoreductase domainPFAMPF00248Aldo_ket_redcoord: 2..97
score: 8.9
IPR023210NADP-dependent oxidoreductase domainunknownSSF51430NAD(P)-linked oxidoreductasecoord: 1..97
score: 5.5
NoneNo IPR availablePANTHERPTHR11732:SF263SUBFAMILY NOT NAMEDcoord: 2..97
score: 8.2

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C023739Csa3G257070Cucumber (Chinese Long) v2cumeB161
The following gene(s) are paralogous to this gene:

None