MELO3C023727 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C023727
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	CDT1 A, putative
Location	chr1 : 5699024 .. 5701412 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCGGAGAGTTTCTCTGTTATATGATTCTGAATTTGATGGCTATGAGCGTAGGAGGTTTTCATATGGTCATTTGGCTCAGTTCAAGTTTATTTTACCCGAAGCAATTGTTCTCAAGAAGGTTGTGGTCTACGATGAGCAGACCTGCTGTATGAAGCCAGATCTTCACATATCTTTCAATTTTGCTGTTCTAGAGAATAAGGAGGACCAATATATGCAACTGAGGAAGTTGTTTCGGGCACGGCTTTCAGAATTTGTTAGTTCCTATCCAGAGGTATGTCAACATTTTCCATCTGTGATTTGTAGACTTAGGGTTTATCTGTATTTGTCCTCATGAATTTTAGAATGTTGGTTCTTTCTATATGAAATGTGAATATTGACGTCCCTATATCGTTGTTAGTACTTGCTTTGTTTTCAAGTGGACATGAATGTCTTTAAACATATTACATTGATGCTTGATGAATGTTGCATTTCATAAATTGTATAGTTTAGGAATTAAGTTAGTGGAATAACAAGGAGTTGTAGCATTTTGGTCATAAAATTTTGTTGTTATCATTTGCACGATGGCCACCAAGATGCCTTGATTTCTCTGTTTCGTTTTGTAAGTCATTTTTCTTATATTTTGGCTATATTGTCTCTTGGTCCTTCAAAATTTCTATGTTCTAATGCATGCTTCTATATTCAGACTCATGATGTTCCAAAGGATTTGCTGCCGAATCCATTCAATTTCCGAAGCCAAGATCTTGTTGCAAAATCCAACTCGCTATCCTCTATCAAGACATCGATCGAGCAATTGGCCCCTGAGCAACCAATGCCATCAATAGAAGGGATTTGTTTTAACCATCATTCAGAAGAAAATCAAGGTTTCCGGATAGTTAAATCTACCATGTCTATATCTGGCTCGAGTAAGCAGAAGGAATTTTCAGGGTTATCTCATTTTTCACCATCTTTTAGCCGGCGTTTCTCTCAAAAAGTTGTTGACAGAGAAATAGCAATCAATGATCAAGTTACAACACCTTCTAACCAAGTTTCATCTTGTACTGACGTTGAGACAAATATCGACACAGAATCTTCTGTTGTAGCATCTTCAACTGAGCCTTTCTCCCCCATAAAAGTACCTTCCAACTCAACTTGCAATGTACATTGTCACGAAAACTATGCTTCTCCACTTCGTTCTTTGGCATTGGCCCTTCCCACAACTCCCAGTAATACAACAGGCAGAGTAACCATGATGATAGAATGTGACCAATCTGCAAAAGCTAATGATATTGATTCAACTCCAAGAAAGCTTGTTTCAACCCCAACTCGACTGATGACTAACACACCTGCAATGCCTCCACCAAAACGAAGTTCCATGACTCCCGATGACGATCCTTCTTTCTCAACAAACAAGCTGGTCAGACGTCCTCCCCGTTCGAGATCACTTGTATTTGACACTCCTACAAAGGAATATAAAAACAATGATGAGAGAGATGTTTCACTTGAAAATGACATTGGAGATGTTTTATCTCCAAGCCTCGTACAATCTGTATGTGACTATTCCCTCTCTTATAAGCAACCTTCCCTTAGTTTATGCTAACTAATACTACCATTTGCAGTAAAAAATGACAATATACTAAGAGTTTCTTGTGTTCTTGATTTGCAGATTAGAGAGAAAGAACGAAAGGTCAAAGAAGAGCAAATGCCGGCAATAACACAAGCTAAGAGACGACAGGAAATGATTGCTAACCTGCCAAAACTCTTCAATGCTATCTTTTTCTTGTACCACAAGCGTACAGTTATTAGAAGGCAGGAGCTATTTCACAAAATAATCGCCAGTAGTGACAAAAGTAAGCAAAAATAAATACGCCTGTTTTAAAGTAGGTTTCAATTTGTTTTAGCTTGTCTGGAGCTGATTCATTTCTTTTGTTATACTCATAGGAGAAATTGAAGAGCAGCTAGATTTGTTGTTTGAACTTGCACCCGAATGGATTTCTCAAAAATCGACATCCAGCGGTGATGTGCTAGTTTGGTTAGCTTTCCTTTCTTACACTCTTATATTAAAGTTCTGGAAAATCATCCATTAGATATTGAACACGAGAAAAACTTTAGCAAAAACTTATGCCTCCATATAGAAAAATGTGCTAATTAAATCCTATTTGGTTTCATATTGTAGCATCAATGAATTGTCGAATGTGGAATCAATACGTGATCGGCTTGAGGAAGCTAAGTGAAGAAAGGAGTTGAGAAGTTGGTCTACTTTTTTTTGTCCCTCTCAGCATCTAACCTTGCATACACAATTGAAATTTCCACTCTCTTCATCAAGCACCAGCCATTTTTATTATAATGGCAGTAGCTTGCTTTCCTCTGGTAAGATGTACAGTTTAAGGGATAGAGCAAATTCTTCA

mRNA sequence

ATGTCTCGGAGAGTTTCTCTGTTATATGATTCTGAATTTGATGGCTATGAGCGTAGGAGGTTTTCATATGGTCATTTGGCTCAGTTCAAGTTTATTTTACCCGAAGCAATTGTTCTCAAGAAGGTTGTGGTCTACGATGAGCAGACCTGCTGTATGAAGCCAGATCTTCACATATCTTTCAATTTTGCTGTTCTAGAGAATAAGGAGGACCAATATATGCAACTGAGGAAGTTGTTTCGGGCACGGCTTTCAGAATTTGTTAGTTCCTATCCAGAGACTCATGATGTTCCAAAGGATTTGCTGCCGAATCCATTCAATTTCCGAAGCCAAGATCTTGTTGCAAAATCCAACTCGCTATCCTCTATCAAGACATCGATCGAGCAATTGGCCCCTGAGCAACCAATGCCATCAATAGAAGGGATTTGTTTTAACCATCATTCAGAAGAAAATCAAGGTTTCCGGATAGTTAAATCTACCATGTCTATATCTGGCTCGAGTAAGCAGAAGGAATTTTCAGGGTTATCTCATTTTTCACCATCTTTTAGCCGGCGTTTCTCTCAAAAAGTTGTTGACAGAGAAATAGCAATCAATGATCAAGTTACAACACCTTCTAACCAAGTTTCATCTTGTACTGACGTTGAGACAAATATCGACACAGAATCTTCTGTTGTAGCATCTTCAACTGAGCCTTTCTCCCCCATAAAAGTACCTTCCAACTCAACTTGCAATGTACATTGTCACGAAAACTATGCTTCTCCACTTCGTTCTTTGGCATTGGCCCTTCCCACAACTCCCAGTAATACAACAGGCAGAGTAACCATGATGATAGAATGTGACCAATCTGCAAAAGCTAATGATATTGATTCAACTCCAAGAAAGCTTGTTTCAACCCCAACTCGACTGATGACTAACACACCTGCAATGCCTCCACCAAAACGAAGTTCCATGACTCCCGATGACGATCCTTCTTTCTCAACAAACAAGCTGGTCAGACGTCCTCCCCGTTCGAGATCACTTGTATTTGACACTCCTACAAAGGAATATAAAAACAATGATGAGAGAGATGTTTCACTTGAAAATGACATTGGAGATGTTTTATCTCCAAGCCTCGTACAATCTATTAGAGAGAAAGAACGAAAGGTCAAAGAAGAGCAAATGCCGGCAATAACACAAGCTAAGAGACGACAGGAAATGATTGCTAACCTGCCAAAACTCTTCAATGCTATCTTTTTCTTGTACCACAAGCGTACAGTTATTAGAAGGCAGGAGCTATTTCACAAAATAATCGCCAGTAGTGACAAAAGAGAAATTGAAGAGCAGCTAGATTTGTTGTTTGAACTTGCACCCGAATGGATTTCTCAAAAATCGACATCCAGCGGTGATGTGCTAGTTTGCATCAATGAATTGTCGAATGTGGAATCAATACGTGATCGGCTTGAGGAAGCTAAGTGAAGAAAGGAGTTGAGAAGTTGGTCTACTTTTTTTTGTCCCTCTCAGCATCTAACCTTGCATACACAATTGAAATTTCCACTCTCTTCATCAAGCACCAGCCATTTTTATTATAATGGCAGTAGCTTGCTTTCCTCTGGTAAGATGTACAGTTTAAGGGATAGAGCAAATTCTTCA

Coding sequence (CDS)

ATGTCTCGGAGAGTTTCTCTGTTATATGATTCTGAATTTGATGGCTATGAGCGTAGGAGGTTTTCATATGGTCATTTGGCTCAGTTCAAGTTTATTTTACCCGAAGCAATTGTTCTCAAGAAGGTTGTGGTCTACGATGAGCAGACCTGCTGTATGAAGCCAGATCTTCACATATCTTTCAATTTTGCTGTTCTAGAGAATAAGGAGGACCAATATATGCAACTGAGGAAGTTGTTTCGGGCACGGCTTTCAGAATTTGTTAGTTCCTATCCAGAGACTCATGATGTTCCAAAGGATTTGCTGCCGAATCCATTCAATTTCCGAAGCCAAGATCTTGTTGCAAAATCCAACTCGCTATCCTCTATCAAGACATCGATCGAGCAATTGGCCCCTGAGCAACCAATGCCATCAATAGAAGGGATTTGTTTTAACCATCATTCAGAAGAAAATCAAGGTTTCCGGATAGTTAAATCTACCATGTCTATATCTGGCTCGAGTAAGCAGAAGGAATTTTCAGGGTTATCTCATTTTTCACCATCTTTTAGCCGGCGTTTCTCTCAAAAAGTTGTTGACAGAGAAATAGCAATCAATGATCAAGTTACAACACCTTCTAACCAAGTTTCATCTTGTACTGACGTTGAGACAAATATCGACACAGAATCTTCTGTTGTAGCATCTTCAACTGAGCCTTTCTCCCCCATAAAAGTACCTTCCAACTCAACTTGCAATGTACATTGTCACGAAAACTATGCTTCTCCACTTCGTTCTTTGGCATTGGCCCTTCCCACAACTCCCAGTAATACAACAGGCAGAGTAACCATGATGATAGAATGTGACCAATCTGCAAAAGCTAATGATATTGATTCAACTCCAAGAAAGCTTGTTTCAACCCCAACTCGACTGATGACTAACACACCTGCAATGCCTCCACCAAAACGAAGTTCCATGACTCCCGATGACGATCCTTCTTTCTCAACAAACAAGCTGGTCAGACGTCCTCCCCGTTCGAGATCACTTGTATTTGACACTCCTACAAAGGAATATAAAAACAATGATGAGAGAGATGTTTCACTTGAAAATGACATTGGAGATGTTTTATCTCCAAGCCTCGTACAATCTATTAGAGAGAAAGAACGAAAGGTCAAAGAAGAGCAAATGCCGGCAATAACACAAGCTAAGAGACGACAGGAAATGATTGCTAACCTGCCAAAACTCTTCAATGCTATCTTTTTCTTGTACCACAAGCGTACAGTTATTAGAAGGCAGGAGCTATTTCACAAAATAATCGCCAGTAGTGACAAAAGAGAAATTGAAGAGCAGCTAGATTTGTTGTTTGAACTTGCACCCGAATGGATTTCTCAAAAATCGACATCCAGCGGTGATGTGCTAGTTTGCATCAATGAATTGTCGAATGTGGAATCAATACGTGATCGGCTTGAGGAAGCTAAGTGA

Protein sequence

MSRRVSLLYDSEFDGYERRRFSYGHLAQFKFILPEAIVLKKVVVYDEQTCCMKPDLHISFNFAVLENKEDQYMQLRKLFRARLSEFVSSYPETHDVPKDLLPNPFNFRSQDLVAKSNSLSSIKTSIEQLAPEQPMPSIEGICFNHHSEENQGFRIVKSTMSISGSSKQKEFSGLSHFSPSFSRRFSQKVVDREIAINDQVTTPSNQVSSCTDVETNIDTESSVVASSTEPFSPIKVPSNSTCNVHCHENYASPLRSLALALPTTPSNTTGRVTMMIECDQSAKANDIDSTPRKLVSTPTRLMTNTPAMPPPKRSSMTPDDDPSFSTNKLVRRPPRSRSLVFDTPTKEYKNNDERDVSLENDIGDVLSPSLVQSIREKERKVKEEQMPAITQAKRRQEMIANLPKLFNAIFFLYHKRTVIRRQELFHKIIASSDKREIEEQLDLLFELAPEWISQKSTSSGDVLVCINELSNVESIRDRLEEAK*

Homology

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BLAST of MELO3C023727 vs. Swiss-Prot
Match: CDT1A_ARATH (CDT1-like protein a, chloroplastic OS=Arabidopsis thaliana GN=CDT1A PE=1 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.0e-55
Identity = 163/478 (34.10%), Postives = 248/478 (51.88%), Query Frame = 1


Query: 19  RRFSYGHLAQFKFILPEAIVLKKVVVYDEQTCCMKPDLHISFNFAVLE-----NKEDQYM 78
           RRF Y HLAQ K ILPEAI +K+V+++DE TCCMKPDLH++ N   +E       E + +
Sbjct: 154 RRFCYSHLAQIKHILPEAIEIKRVLIHDETTCCMKPDLHVTLNADAVEYNDKSKSESKKI 213

Query: 79  QLRKLFRARLSEFVSSYPETHDVPKDLLPNPFNFRSQDLVAKSN-SLSSIKTSIEQLA-- 138
            LRK+FRARL++FV ++P+  +VP++ LP PFN R    V  SN  +  + + +E++A  
Sbjct: 214 ALRKVFRARLADFVKAHPQGDEVPEEPLPEPFNRRKP--VENSNVEVKRVSSLMEEMASI 273

Query: 139 PEQPMPSIEGICFNHHSEENQGFRIVKSTMSISGSSKQKEFSGLSHFSPSFSRRFSQKVV 198
           P   + S                  + ST   + SS  K  S   + +P+ ++       
Sbjct: 274 PASKLFSSP----------------ITSTPVKTTSSLAKPTSSQINIAPTPTK------- 333

Query: 199 DREIAINDQVTTPSNQVSSCTDVETNIDTESSVVASSTE-PFSPIKVPSNSTCNVHCHEN 258
                     +TP+ Q  S  ++   + T    V++  + P +P  + S         E 
Sbjct: 334 --------PTSTPAKQTLSEINI---LPTPVKPVSTLAKFPSTPAIIDSTPVITATPPEF 393

Query: 259 YASPLRSLALALPTTPSNTTGRVTMMIECDQSAKANDIDSTPRKLVSTPTRLMTNTPAMP 318
            ++P R ++ +L   P   +   T           +DI + P      PT+L+  + ++ 
Sbjct: 394 ASTPARLMSTSLAARPLKRSNGHT---------NPDDISADP------PTKLVRRSLSL- 453

Query: 319 PPKRSSMTPDDDPSFSTNKLVRRPPRSRSLVFDTPTKEYKNNDERDVSLENDIGDVLSPS 378
                   P+D+             R+     D P  +     E DVS +++I  +L   
Sbjct: 454 ---NFDSYPEDE-------------RTMDFTDDIPIDQV---PEEDVSSDDEILSILPDK 513

Query: 379 LVQSIREKERKVKEEQMPAITQAKRRQEMIANLPKLFNAIFFLYH--KRTVIRRQELFHK 438
           L  +I+E+ERK  E+Q PAI+ AKRR++MIA LPKLFN I +L    +R VI ++EL HK
Sbjct: 514 LRHAIKEQERKAIEDQNPAISLAKRRRKMIACLPKLFNVIHYLIQSIRRWVITKEELVHK 560

Query: 439 IIAS----SDKREIEEQLDLLFELAPEWISQKSTSSGDVLVCINELSNVESIRDRLEE 482
           IIA     +D++E+EEQL LL E+ PEW+S+K +SSGDVLVCIN+L++  +IR RLEE
Sbjct: 574 IIAGHSDITDRKEVEEQLILLQEIVPEWMSEKKSSSGDVLVCINKLASPLTIRSRLEE 560

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BLAST of MELO3C023727 vs. Swiss-Prot
Match: CDT1B_ARATH (CDT1-like protein b OS=Arabidopsis thaliana GN=CDT1B PE=1 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 5.8e-19
Identity = 85/237 (35.86%), Postives = 116/237 (48.95%), Query Frame = 1


Query: 289 STPRKLVSTPTRLMTNTPAMPPPKRS-SMTP---DDDPSFSTNKLVRRPPRSRSLVFDTP 348
           STP K +STP RLM+ TP +   KR   +TP   DD+   STN L R P  SRSL FDT 
Sbjct: 243 STPSKDLSTPIRLMSATPTLQLSKRCIELTPEGGDDNSLRSTNSLARGP--SRSLNFDTF 302

Query: 349 TKEY-------KNNDERDVSLEND--IGDVLSP--SLVQSIREKERKVKEEQMPAITQAK 408
            ++          +D++ ++ E D  +  V  P  SL     E+E  VK++        K
Sbjct: 303 EEDAIEKDDIGNESDDKGINYEEDGLLQSVKGPSRSLNFDTLEEETIVKDDISNESGDEK 362

Query: 409 RRQE------------MIANLPKLFNAIFFLYHKR------------TVIRRQELFHKII 468
              E             +   PK       L                TVI ++EL +KII
Sbjct: 363 SNYEGDNASDDDSLLQSMIERPKTEPEKHNLPQLVNLIHRVFHSTNRTVITKEELLYKII 422

Query: 469 AS----SDKREIEEQLDLLFELAPEWISQKSTSSGDVLVCINELSNVESIRDRLEEA 483
           A+    +D+RE+EEQL L+ +L P+WIS+   SSGD+LV IN++S  E++R RLEEA
Sbjct: 423 ANQINITDRREVEEQLSLMLQLVPDWISETKASSGDLLVRINKMSTAETVRARLEEA 477

HSP 2 Score: 90.5 bits (223), Expect = 5.4e-17
Identity = 46/97 (47.42%), Postives = 63/97 (64.95%), Query Frame = 1


Query: 19  RRFSYGHLAQFKFILPEAIVLKKVVVYDEQTCCMKPDLHISFNFAVLENKE----DQYMQ 78
           R FSY HLAQ K I PEAI LK+V+ + E TCCMKP LHI  N   +  ++     +YM+
Sbjct: 89  RIFSYDHLAQMKHIYPEAIELKRVLKFVEDTCCMKPRLHIKLNTDAIVVEDTICGTKYME 148

Query: 79  LRKLFRARLSEFVSSYPETHDVPKDLLPNPFNFRSQD 112
           LRK+F ++L +F  ++P+  ++PK+LLP PFN   +D
Sbjct: 149 LRKVFHSKLVDFRKAHPK-DEIPKELLPEPFNSPQRD 184

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BLAST of MELO3C023727 vs. TrEMBL
Match: A0A0A0L7I7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G394670 PE=4 SV=1)

HSP 1 Score: 617.8 bits (1592), Expect = 1.1e-173
Identity = 331/470 (70.43%), Postives = 372/470 (79.15%), Query Frame = 1


Query: 19  RRFSYGHLAQFKFILPEAIVLKKVVVYDEQTCCMKPDLHISFNFAVLENKEDQYMQLRKL 78
           RRFSY HLAQ KFILPEAI+LKKVVV+   T CMKPDLHISFNF VLE+KEDQYMQLRKL
Sbjct: 157 RRFSYSHLAQLKFILPEAIMLKKVVVFYGLTSCMKPDLHISFNFGVLESKEDQYMQLRKL 216

Query: 79  FRARLSEFVSSYPETHDVPKDLLPNPFNFRSQDLVAKSNSLSSIKTSIEQLAPEQPMPSI 138
           FR RLSEFVSS+PE  D+PKD LPNPFNFRS +L  ++NSLSS+KTSIEQLAPEQP+PS 
Sbjct: 217 FRTRLSEFVSSHPEIDDIPKDSLPNPFNFRSLNLFPETNSLSSVKTSIEQLAPEQPLPSA 276

Query: 139 EGICFNHHSEENQGFRIVKSTMSISGSSKQKEFSGLSHFSPSFSRRFSQKVVDREIAIND 198
           E I  NHHSE NQGFRI+KSTM+  G +KQKE  GLSHFSP  SR FSQK V+ ++   D
Sbjct: 277 EDIPSNHHSENNQGFRIIKSTMTGHGPNKQKELFGLSHFSP-VSRLFSQKAVNIDVQTFD 336

Query: 199 QVTTPSNQVSSCTDVETNIDTESSVVASSTEPFSPIKVPSNSTCNVHCHENYASPLRSLA 258
                                     ASST+P SPIK+ SNST N+HC ENYASP+ S +
Sbjct: 337 --------------------------ASSTKPSSPIKLSSNSTSNLHCLENYASPICSSS 396

Query: 259 LALPTTPSNTTGRVTMMIECDQSAKANDIDSTPRKLVSTPTRLMTNTPAMPPPKRSSMTP 318
           L  PTTPSN  G VTM  E  QSAK NDIDSTP K VST  +LM +TPAM PPKRSSMTP
Sbjct: 397 LPNPTTPSNMVGIVTMRKEDGQSAKVNDIDSTPVKFVSTSDQLMASTPAMAPPKRSSMTP 456

Query: 319 DDDPSFSTNKLVRRPPRSRSLVFDTPTKEYKNNDERDVSLENDIGDVLSPSLVQSIREKE 378
           DDD S+STNKLVRRPPRSRSLVFDTPTKE KN DE DVSL+NDI DVLS SLVQSIREKE
Sbjct: 457 DDDFSYSTNKLVRRPPRSRSLVFDTPTKEDKNKDEIDVSLDNDILDVLSESLVQSIREKE 516

Query: 379 RKVKEEQMPAITQAKRRQEMIANLPKLFNAIFFLYHKRTVIRRQELFHKIIASS----DK 438
           RK+KEEQMPAITQAKRRQ++IANLPKLFNAIFFLYHKRTV++R+EL +KII  S    D+
Sbjct: 517 RKIKEEQMPAITQAKRRQKLIANLPKLFNAIFFLYHKRTVVKREELLNKIITGSVDILDR 576

Query: 439 REIEEQLDLLFELAPEWISQK-STSSGDVLVCINELSNVESIRDRLEEAK 484
           RE+EEQLDLLFEL P+WISQK +++ GDVLVCIN+LSNVES+  RL+EAK
Sbjct: 577 REVEEQLDLLFELVPDWISQKLASNGGDVLVCINKLSNVESVSVRLKEAK 599

[Close]

BLAST of MELO3C023727 vs. TrEMBL
Match: A0A072VLQ6_MEDTR (DNA replication factor CDT1-like protein OS=Medicago truncatula GN=MTR_1g070170 PE=4 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 1.2e-87
Identity = 207/480 (43.12%), Postives = 290/480 (60.42%), Query Frame = 1


Query: 19  RRFSYGHLAQFKFILPEAIVLKKVVVYDEQTCCMKPDLHISFNFAVLENK-----EDQYM 78
           RRF++ HLAQ KFILPEAI +KK++V+DE+T CMKPDLH+S N   +E       E   M
Sbjct: 150 RRFTHAHLAQLKFILPEAIAIKKLLVFDERTSCMKPDLHVSINPDAVEFNAKLLSESGTM 209

Query: 79  QLRKLFRARLSEFVSSYPETHDVPKDLLPNPFNFRSQD----LVAKSNSLSSIKTSIEQL 138
            LRKLFR RL+EF  S+PE  +VP+++LP PF+   QD    ++   +S  ++K S+ + 
Sbjct: 210 SLRKLFRVRLNEFWKSHPEGDEVPEEMLPEPFSRPKQDPLVHMMKPPSSFPAVKLSVARA 269

Query: 139 APEQPMPSIEGICFNHHSEENQGFRIVKSTMSISGSSKQKEFSGLSHFSPSFSRRFSQKV 198
           + +        I  N     ++    V +  S+   +++   +  SH   SF RRFSQK+
Sbjct: 270 SSD--------IADNTDPANSESHVSVPAETSVEALNQKPAVA--SHMPQSFRRRFSQKL 329

Query: 199 VDREIAINDQVTTPSNQVSSCTDVETNIDTESSVVASSTEPFSPIKVPSNSTCNVHCHEN 258
            +    +      PS  V   ++    I++ S V   S   F  +   S+S  +   H+ 
Sbjct: 330 KENVQPLQSDSFQPS--VVPVSESSLRINSTSEVPKISPPEF--VVESSSSEAHPAIHDC 389

Query: 259 YASPLRSLALALPTTPSNTTGRVTMMIECDQSAKANDIDSTPRKLVSTPTRLMTNTPAMP 318
           +     +LA     TPS T   +      D S K  D  STP K VSTP RLM+ TPA+ 
Sbjct: 390 FTPSRVTLA-----TPSKT---IEYAESKDGSFKTVDAMSTPAKFVSTPARLMSATPALK 449

Query: 319 PPKRSSMTPDDDPSFSTNKLVRRPPRSRSLVFDTPTKEYKNNDERDVSLENDIGDVLSPS 378
           PPKRS MTPDD+ + S +KLV+RPPRSRSL FDTP K    ND   +S+++DI D+L  +
Sbjct: 450 PPKRSFMTPDDNSTSSPDKLVKRPPRSRSLKFDTPMK--NENDAGGLSIDDDIFDILPDN 509

Query: 379 LVQSIREKERKVKEEQMPAITQAKRRQEMIANLPKLFNAIFFLYH--KRTVIRRQELFHK 438
           L+ SI+EKER   EE+ PAI+QAK+R+++IA+LPKLFN I  ++H   R+VI ++EL  K
Sbjct: 510 LLHSIQEKERIAMEERDPAISQAKKRKKIIASLPKLFNMIHMMFHSINRSVITKEELMSK 569

Query: 439 IIASS----DKREIEEQLDLLFELAPEWISQKSTSSGDVLVCINELSNVESIRDRLEEAK 484
           II+S     D+ E+EEQL LL EL PEWIS+K+ SSGD+LV +N++ N ES+R  LEEAK
Sbjct: 570 IISSHRDIVDRSEVEEQLHLLLELVPEWISEKAASSGDMLVSVNKMLNPESLRASLEEAK 605

[Close]

BLAST of MELO3C023727 vs. TrEMBL
Match: A0A067JRG9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17709 PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.3e-86
Identity = 207/492 (42.07%), Postives = 288/492 (58.54%), Query Frame = 1


Query: 19  RRFSYGHLAQFKFILPEAIVLKKVVVYDEQTCCMKPDLHISFNFAVLENKED------QY 78
           RRFS+ HLAQ K+ILPEAI +K+V+++DE+T CMKPDLH++ +   +E+ E+      + 
Sbjct: 161 RRFSHRHLAQLKYILPEAIEIKRVLMFDERTSCMKPDLHVTVDVDAIESDENLKSESNKN 220

Query: 79  MQLRKLFRARLSEFVSSYPETHDVPKDLLPNPFNFRSQDLVAKSNSLSSIKTSIEQLAPE 138
           + LRK+FRARL++F  ++PE  ++P+ +LP PFN RS+    +SN+L +           
Sbjct: 221 LHLRKVFRARLADFYKAHPEGDEIPEAMLPEPFN-RSKQPAVESNTLET----------- 280

Query: 139 QPMPSIEGICFNHHSEENQGFRIVKSTMSISGSSKQKEFSGLSHFSPSFSRRFSQKVVDR 198
                   +   H S  +       S +      K +  +  SH S SF +RFSQKV   
Sbjct: 281 -------NVNVGHGSNSS-------SPVETGTLEKHQPAAVASHLSQSFKKRFSQKVAKS 340

Query: 199 E---IAINDQVTTPSNQVSSCTDVETNIDTESSVVASSTEPFSPIKVPSNSTCNVHCHEN 258
           E     I   +T     +S   + ET++   S +  SS       ++   +  +  C+ +
Sbjct: 341 ESENACIYSPMTCSRQSISPVLE-ETSLSEPSLITVSS-------ELTDGNKDSTFCNSS 400

Query: 259 YASPLRSLALALPTTPSNTTGRVTMMIECDQSAKAN--DIDSTPRKLVSTPTRLMTNTPA 318
              P+  L LA P    ++       I C  S+        STP KL STP  L + TPA
Sbjct: 401 IGEPMACL-LATPCKDMDS-------INCRDSSAEEIASFQSTPAKLASTPAALKSATPA 460

Query: 319 MPPPKRSSMTPDDDPSFSTNKLVRRPPRSRSLVFDTPTKEYKN--NDERDVSLEN----- 378
           + PPKR  M+PD+D S   +KLVRRPPR+RSL F+TP K  KN  N   +VS +N     
Sbjct: 461 LRPPKRCYMSPDEDSSSLADKLVRRPPRARSLNFETPVKNVKNELNGMENVSADNHDDDD 520

Query: 379 ---DIGDVLSPSLVQSIREKERKVKEEQMPAITQAKRRQEMIANLPKLFNAIFFLYH--K 438
              DI ++L  SL+QSIREKERKV+EE+ PAI+ AKRR++M+A LPKLFN I FL+    
Sbjct: 521 DDDDILNILPESLLQSIREKERKVQEERDPAISLAKRRRQMVACLPKLFNVIHFLFQSIN 580

Query: 439 RTVIRRQELFHKIIASS----DKREIEEQLDLLFELAPEWISQKSTSSGDVLVCINELSN 484
           R+VI ++EL HKIIA      D+RE+EEQL LL EL PEWIS+KS SSGD+L CIN++S+
Sbjct: 581 RSVITKEELIHKIIAGHSDIVDRREVEEQLKLLLELVPEWISEKSASSGDLLFCINKMSS 610

[Close]

BLAST of MELO3C023727 vs. TrEMBL
Match: A0A067FZ19_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g006819mg PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 1.7e-86
Identity = 210/497 (42.25%), Postives = 290/497 (58.35%), Query Frame = 1


Query: 19  RRFSYGHLAQFKFILPEAIVLKKVVVYDEQTCCMKPDLHISFNFAVLE-----NKEDQYM 78
           RRFS GHLAQ KFILPE I +KKV+ +DE+T CMKPDLH++ N   +E         + +
Sbjct: 147 RRFSLGHLAQLKFILPEVIQIKKVLTFDEKTSCMKPDLHVTVNADAIECDGKSKCNSKNL 206

Query: 79  QLRKLFRARLSEFVSSYPETHDVPKDLLPNPFNFRSQDL----VAKSNSLSSIKTSIEQL 138
            LR +FRARL +F+  +PE  ++P++ LP PFN    DL    V KS SL+   +  +  
Sbjct: 207 NLRTVFRARLMDFLKDHPEGDEIPEETLPEPFNRSRSDLQLNMVKKSTSLTPADSPTDAS 266

Query: 139 APEQPMPSIEGICFNH---HSEENQGFRIVKSTMSISGSSKQ----KEFSGLSHFSPSFS 198
             +Q + S    C N    +  +     +V  T + +  ++Q      FS   HFS  F 
Sbjct: 267 VEQQQVSS--PTCQNSKLLNIVKAPSISMVTGTSASASDNQQPIVASHFSSRRHFSQKFV 326

Query: 199 RRFSQKVVDREIAINDQV---TTPSNQVSSCTDVETNIDTESSVVASSTEPFSPIKVPSN 258
              ++K     I+    +   TTP+  +  C    ++I+   S  A      S +++ S 
Sbjct: 327 NSLAEKKKAERISSGVSIEPSTTPA--LEPCLRKISSIEETCSTAA-----ISAVELSSK 386

Query: 259 STCNVHCHENYASPLRSLALALPTTPSNTTGRVTMMIECDQSAKANDIDSTPRKLVSTPT 318
           ST   +C    ASP R      P TP        M  +     K +   STP KLVSTP 
Sbjct: 387 STSKENCLTYCASPTRLSQSCPPVTPVKEID--PMESKVSYPIKVDSEQSTPAKLVSTPA 446

Query: 319 RLMTNTPAMPPPKRSSMTPDDDPSFSTNKLVRRPPRSR---SLVFDTPTK----EYKNND 378
           RLM  TPA+  PKR  MTP++  + S NKL RRPP SR   SL FDTP K    E+K N+
Sbjct: 447 RLMIGTPALHQPKRCYMTPENVSASSPNKLTRRPPHSRTLKSLKFDTPVKNATVEHKLNE 506

Query: 379 ERDVSLENDIGDVLSPSLVQSIREKERKVKEEQMPAITQAKRRQEMIANLPKLFNAIFFL 438
             D+S++ D+ D+L  +L+QSIREKERK  EE+ PAI+QAK R++MIA+LPKLFN I FL
Sbjct: 507 --DISVDGDVLDILPENLIQSIREKERKFMEERDPAISQAKWRRQMIASLPKLFNMIHFL 566

Query: 439 YH--KRTVIRRQELFHKIIAS----SDKREIEEQLDLLFELAPEWISQKSTSSGDVLVCI 484
           +   KR+VI ++EL HKII+S    +D+RE+EEQ++L+ EL PEWIS+K +S GD+LVCI
Sbjct: 567 FQSIKRSVITKEELIHKIISSHLQITDRREVEEQMNLMLELVPEWISEKLSSCGDLLVCI 626

[Close]

BLAST of MELO3C023727 vs. TrEMBL
Match: V4T9W2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019292mg PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 1.5e-85
Identity = 208/497 (41.85%), Postives = 289/497 (58.15%), Query Frame = 1


Query: 19  RRFSYGHLAQFKFILPEAIVLKKVVVYDEQTCCMKPDLHISFNFAVLE-----NKEDQYM 78
           RRFS GHLAQ KFILPE I +KKV+ +DE+T CMKPDLH++ N   +E         + +
Sbjct: 147 RRFSLGHLAQLKFILPEVIQIKKVLTFDEKTSCMKPDLHVTVNADAIECDGKSKCNSKNL 206

Query: 79  QLRKLFRARLSEFVSSYPETHDVPKDLLPNPFNFRSQDL----VAKSNSLSSIKTSIEQL 138
            LR +FRARL +F+  +PE  ++P++ LP PFN    DL    V  S SL+   +  +  
Sbjct: 207 NLRTVFRARLMDFLKDHPEGDEIPEETLPEPFNRSRSDLQLNMVKNSTSLTPADSPTDAS 266

Query: 139 APEQPMPSIEGICFNH---HSEENQGFRIVKSTMSISGSSKQ----KEFSGLSHFSPSFS 198
             +Q + S    C N    +  +     +V  T + +  ++Q      FS   HFS  F 
Sbjct: 267 VEQQQVSS--PTCQNSKLLNIVKAPSISMVTGTSASASDNQQPIVASHFSSRRHFSQKFV 326

Query: 199 RRFSQKVVDREIAINDQV---TTPSNQVSSCTDVETNIDTESSVVASSTEPFSPIKVPSN 258
              ++K     I+    +   TTP+  +  C    ++I+   S  A      S +++ S 
Sbjct: 327 NSLAEKKKAERISSGVSIEPSTTPA--LEPCLRKISSIEETCSTAA-----ISAVELSSK 386

Query: 259 STCNVHCHENYASPLRSLALALPTTPSNTTGRVTMMIECDQSAKANDIDSTPRKLVSTPT 318
           ST   +C    ASP R      P TP        M  +     K +   STP KLVSTP 
Sbjct: 387 STSKENCLTYCASPTRLSQSCPPVTPVKEID--PMESKVSYPIKVDSEQSTPAKLVSTPA 446

Query: 319 RLMTNTPAMPPPKRSSMTPDDDPSFSTNKLVRRPPRSR---SLVFDTPTK----EYKNND 378
           RLM  TPA+  PKR  MTP++  + S NKL RRPP SR   SL FDTP K    E+K N+
Sbjct: 447 RLMIGTPALHQPKRCYMTPENVSASSPNKLTRRPPHSRTLKSLKFDTPVKNATVEHKLNE 506

Query: 379 ERDVSLENDIGDVLSPSLVQSIREKERKVKEEQMPAITQAKRRQEMIANLPKLFNAIFFL 438
             D+S++ D+ D+L  +L+QSIREKE+K  EE+ PAI+QAK R++MIA+LPKLFN I FL
Sbjct: 507 --DISVDGDVLDILPENLIQSIREKEKKFMEERDPAISQAKWRRQMIASLPKLFNMIHFL 566

Query: 439 YH--KRTVIRRQELFHKIIAS----SDKREIEEQLDLLFELAPEWISQKSTSSGDVLVCI 484
           +   KR+VI ++EL HKII+S    +D+RE+EEQ++L+ EL PEWIS+K +S GD+LVCI
Sbjct: 567 FQSIKRSVITKEELIHKIISSHLQITDRREVEEQMNLMLELVPEWISEKLSSCGDLLVCI 626

[Close]

BLAST of MELO3C023727 vs. TAIR10
Match: AT2G31270.1 (AT2G31270.1 homolog of yeast CDT1 A)

HSP 1 Score: 219.2 bits (557), Expect = 5.7e-57
Identity = 163/478 (34.10%), Postives = 248/478 (51.88%), Query Frame = 1


Query: 19  RRFSYGHLAQFKFILPEAIVLKKVVVYDEQTCCMKPDLHISFNFAVLE-----NKEDQYM 78
           RRF Y HLAQ K ILPEAI +K+V+++DE TCCMKPDLH++ N   +E       E + +
Sbjct: 154 RRFCYSHLAQIKHILPEAIEIKRVLIHDETTCCMKPDLHVTLNADAVEYNDKSKSESKKI 213

Query: 79  QLRKLFRARLSEFVSSYPETHDVPKDLLPNPFNFRSQDLVAKSN-SLSSIKTSIEQLA-- 138
            LRK+FRARL++FV ++P+  +VP++ LP PFN R    V  SN  +  + + +E++A  
Sbjct: 214 ALRKVFRARLADFVKAHPQGDEVPEEPLPEPFNRRKP--VENSNVEVKRVSSLMEEMASI 273

Query: 139 PEQPMPSIEGICFNHHSEENQGFRIVKSTMSISGSSKQKEFSGLSHFSPSFSRRFSQKVV 198
           P   + S                  + ST   + SS  K  S   + +P+ ++       
Sbjct: 274 PASKLFSSP----------------ITSTPVKTTSSLAKPTSSQINIAPTPTK------- 333

Query: 199 DREIAINDQVTTPSNQVSSCTDVETNIDTESSVVASSTE-PFSPIKVPSNSTCNVHCHEN 258
                     +TP+ Q  S  ++   + T    V++  + P +P  + S         E 
Sbjct: 334 --------PTSTPAKQTLSEINI---LPTPVKPVSTLAKFPSTPAIIDSTPVITATPPEF 393

Query: 259 YASPLRSLALALPTTPSNTTGRVTMMIECDQSAKANDIDSTPRKLVSTPTRLMTNTPAMP 318
            ++P R ++ +L   P   +   T           +DI + P      PT+L+  + ++ 
Sbjct: 394 ASTPARLMSTSLAARPLKRSNGHT---------NPDDISADP------PTKLVRRSLSL- 453

Query: 319 PPKRSSMTPDDDPSFSTNKLVRRPPRSRSLVFDTPTKEYKNNDERDVSLENDIGDVLSPS 378
                   P+D+             R+     D P  +     E DVS +++I  +L   
Sbjct: 454 ---NFDSYPEDE-------------RTMDFTDDIPIDQV---PEEDVSSDDEILSILPDK 513

Query: 379 LVQSIREKERKVKEEQMPAITQAKRRQEMIANLPKLFNAIFFLYH--KRTVIRRQELFHK 438
           L  +I+E+ERK  E+Q PAI+ AKRR++MIA LPKLFN I +L    +R VI ++EL HK
Sbjct: 514 LRHAIKEQERKAIEDQNPAISLAKRRRKMIACLPKLFNVIHYLIQSIRRWVITKEELVHK 560

Query: 439 IIAS----SDKREIEEQLDLLFELAPEWISQKSTSSGDVLVCINELSNVESIRDRLEE 482
           IIA     +D++E+EEQL LL E+ PEW+S+K +SSGDVLVCIN+L++  +IR RLEE
Sbjct: 574 IIAGHSDITDRKEVEEQLILLQEIVPEWMSEKKSSSGDVLVCINKLASPLTIRSRLEE 560

[Close]

BLAST of MELO3C023727 vs. TAIR10
Match: AT3G54710.1 (AT3G54710.1 homolog of yeast CDT1 B homolog of yeast CDT1 B)

HSP 1 Score: 97.1 bits (240), Expect = 3.3e-20
Identity = 85/237 (35.86%), Postives = 116/237 (48.95%), Query Frame = 1


Query: 289 STPRKLVSTPTRLMTNTPAMPPPKRS-SMTP---DDDPSFSTNKLVRRPPRSRSLVFDTP 348
           STP K +STP RLM+ TP +   KR   +TP   DD+   STN L R P  SRSL FDT 
Sbjct: 243 STPSKDLSTPIRLMSATPTLQLSKRCIELTPEGGDDNSLRSTNSLARGP--SRSLNFDTF 302

Query: 349 TKEY-------KNNDERDVSLEND--IGDVLSP--SLVQSIREKERKVKEEQMPAITQAK 408
            ++          +D++ ++ E D  +  V  P  SL     E+E  VK++        K
Sbjct: 303 EEDAIEKDDIGNESDDKGINYEEDGLLQSVKGPSRSLNFDTLEEETIVKDDISNESGDEK 362

Query: 409 RRQE------------MIANLPKLFNAIFFLYHKR------------TVIRRQELFHKII 468
              E             +   PK       L                TVI ++EL +KII
Sbjct: 363 SNYEGDNASDDDSLLQSMIERPKTEPEKHNLPQLVNLIHRVFHSTNRTVITKEELLYKII 422

Query: 469 AS----SDKREIEEQLDLLFELAPEWISQKSTSSGDVLVCINELSNVESIRDRLEEA 483
           A+    +D+RE+EEQL L+ +L P+WIS+   SSGD+LV IN++S  E++R RLEEA
Sbjct: 423 ANQINITDRREVEEQLSLMLQLVPDWISETKASSGDLLVRINKMSTAETVRARLEEA 477

HSP 2 Score: 90.5 bits (223), Expect = 3.1e-18
Identity = 46/97 (47.42%), Postives = 63/97 (64.95%), Query Frame = 1


Query: 19  RRFSYGHLAQFKFILPEAIVLKKVVVYDEQTCCMKPDLHISFNFAVLENKE----DQYMQ 78
           R FSY HLAQ K I PEAI LK+V+ + E TCCMKP LHI  N   +  ++     +YM+
Sbjct: 89  RIFSYDHLAQMKHIYPEAIELKRVLKFVEDTCCMKPRLHIKLNTDAIVVEDTICGTKYME 148

Query: 79  LRKLFRARLSEFVSSYPETHDVPKDLLPNPFNFRSQD 112
           LRK+F ++L +F  ++P+  ++PK+LLP PFN   +D
Sbjct: 149 LRKVFHSKLVDFRKAHPK-DEIPKELLPEPFNSPQRD 184

[Close]

BLAST of MELO3C023727 vs. NCBI nr
Match: gi|659123165|ref|XP_008461526.1| (PREDICTED: CDT1-like protein b [Cucumis melo])

HSP 1 Score: 921.0 bits (2379), Expect = 8.6e-265
Identity = 465/465 (100.00%), Postives = 465/465 (100.00%), Query Frame = 1


Query: 19  RRFSYGHLAQFKFILPEAIVLKKVVVYDEQTCCMKPDLHISFNFAVLENKEDQYMQLRKL 78
           RRFSYGHLAQFKFILPEAIVLKKVVVYDEQTCCMKPDLHISFNFAVLENKEDQYMQLRKL
Sbjct: 155 RRFSYGHLAQFKFILPEAIVLKKVVVYDEQTCCMKPDLHISFNFAVLENKEDQYMQLRKL 214

Query: 79  FRARLSEFVSSYPETHDVPKDLLPNPFNFRSQDLVAKSNSLSSIKTSIEQLAPEQPMPSI 138
           FRARLSEFVSSYPETHDVPKDLLPNPFNFRSQDLVAKSNSLSSIKTSIEQLAPEQPMPSI
Sbjct: 215 FRARLSEFVSSYPETHDVPKDLLPNPFNFRSQDLVAKSNSLSSIKTSIEQLAPEQPMPSI 274

Query: 139 EGICFNHHSEENQGFRIVKSTMSISGSSKQKEFSGLSHFSPSFSRRFSQKVVDREIAIND 198
           EGICFNHHSEENQGFRIVKSTMSISGSSKQKEFSGLSHFSPSFSRRFSQKVVDREIAIND
Sbjct: 275 EGICFNHHSEENQGFRIVKSTMSISGSSKQKEFSGLSHFSPSFSRRFSQKVVDREIAIND 334

Query: 199 QVTTPSNQVSSCTDVETNIDTESSVVASSTEPFSPIKVPSNSTCNVHCHENYASPLRSLA 258
           QVTTPSNQVSSCTDVETNIDTESSVVASSTEPFSPIKVPSNSTCNVHCHENYASPLRSLA
Sbjct: 335 QVTTPSNQVSSCTDVETNIDTESSVVASSTEPFSPIKVPSNSTCNVHCHENYASPLRSLA 394

Query: 259 LALPTTPSNTTGRVTMMIECDQSAKANDIDSTPRKLVSTPTRLMTNTPAMPPPKRSSMTP 318
           LALPTTPSNTTGRVTMMIECDQSAKANDIDSTPRKLVSTPTRLMTNTPAMPPPKRSSMTP
Sbjct: 395 LALPTTPSNTTGRVTMMIECDQSAKANDIDSTPRKLVSTPTRLMTNTPAMPPPKRSSMTP 454

Query: 319 DDDPSFSTNKLVRRPPRSRSLVFDTPTKEYKNNDERDVSLENDIGDVLSPSLVQSIREKE 378
           DDDPSFSTNKLVRRPPRSRSLVFDTPTKEYKNNDERDVSLENDIGDVLSPSLVQSIREKE
Sbjct: 455 DDDPSFSTNKLVRRPPRSRSLVFDTPTKEYKNNDERDVSLENDIGDVLSPSLVQSIREKE 514

Query: 379 RKVKEEQMPAITQAKRRQEMIANLPKLFNAIFFLYHKRTVIRRQELFHKIIASSDKREIE 438
           RKVKEEQMPAITQAKRRQEMIANLPKLFNAIFFLYHKRTVIRRQELFHKIIASSDKREIE
Sbjct: 515 RKVKEEQMPAITQAKRRQEMIANLPKLFNAIFFLYHKRTVIRRQELFHKIIASSDKREIE 574

Query: 439 EQLDLLFELAPEWISQKSTSSGDVLVCINELSNVESIRDRLEEAK 484
           EQLDLLFELAPEWISQKSTSSGDVLVCINELSNVESIRDRLEEAK
Sbjct: 575 EQLDLLFELAPEWISQKSTSSGDVLVCINELSNVESIRDRLEEAK 619

[Close]

BLAST of MELO3C023727 vs. NCBI nr
Match: gi|659111691|ref|XP_008455861.1| (PREDICTED: CDT1-like protein b [Cucumis melo])

HSP 1 Score: 810.8 bits (2093), Expect = 1.3e-231
Identity = 411/465 (88.39%), Postives = 436/465 (93.76%), Query Frame = 1


Query: 19  RRFSYGHLAQFKFILPEAIVLKKVVVYDEQTCCMKPDLHISFNFAVLENKEDQYMQLRKL 78
           RRF+YGHLAQFKFIL EAIVLKKV+VYDE+TCCMKPDLHISFNF V EN+EDQYMQLRKL
Sbjct: 159 RRFTYGHLAQFKFILREAIVLKKVLVYDERTCCMKPDLHISFNFGVPENQEDQYMQLRKL 218

Query: 79  FRARLSEFVSSYPETHDVPKDLLPNPFNFRSQDLVAKSNSLSSIKTSIEQLAPEQPMPSI 138
           FRARLSEFVSSYPET DVPKDLLPNPFNFRSQDLVAKSNSLSSIKTSIEQLAPEQPMPSI
Sbjct: 219 FRARLSEFVSSYPETDDVPKDLLPNPFNFRSQDLVAKSNSLSSIKTSIEQLAPEQPMPSI 278

Query: 139 EGICFNHHSEENQGFRIVKSTMSISGSSKQKEFSGLSHFSPSFSRRFSQKVVDREIAIND 198
           EGI FNHHSEE+QGFR+VKSTM ++  SKQKEF GLSHFSPSFSRRFSQKVVDREIA ND
Sbjct: 279 EGISFNHHSEEHQGFRMVKSTMPVTDPSKQKEFIGLSHFSPSFSRRFSQKVVDREIANND 338

Query: 199 QVTTPSNQVSSCTDVETNIDTESSVVASSTEPFSPIKVPSNSTCNVHCHENYASPLRSLA 258
           QVT PSNQVSS TDVETNID ESSVVASSTEPFSPIK+PSNSTCNV+CH+NYASP+R  A
Sbjct: 339 QVTKPSNQVSSYTDVETNIDMESSVVASSTEPFSPIKLPSNSTCNVNCHKNYASPIRCSA 398

Query: 259 LALPTTPSNTTGRVTMMIECDQSAKANDIDSTPRKLVSTPTRLMTNTPAMPPPKRSSMTP 318
           LALPTTPSNT GRVTMM+ECDQSAKANDIDSTP KL+STPT+LMTNTPAMPPPKRSSMTP
Sbjct: 399 LALPTTPSNTVGRVTMMVECDQSAKANDIDSTPGKLLSTPTQLMTNTPAMPPPKRSSMTP 458

Query: 319 DDDPSFSTNKLVRRPPRSRSLVFDTPTKEYKNNDERDVSLENDIGDVLSPSLVQSIREKE 378
           DDD SFSTNKLVRRPPRSRSLVFDTPTKE KNNDE DVSLE+DI DVLS SLVQSI+EKE
Sbjct: 459 DDDSSFSTNKLVRRPPRSRSLVFDTPTKEDKNNDETDVSLEDDILDVLSSSLVQSIKEKE 518

Query: 379 RKVKEEQMPAITQAKRRQEMIANLPKLFNAIFFLYHKRTVIRRQELFHKIIASSDKREIE 438
           RKVKEEQMPAITQAKRRQ+MIANLPKLFNAIFFLYHKRTVIR+Q+L ++IIA SDKREIE
Sbjct: 519 RKVKEEQMPAITQAKRRQKMIANLPKLFNAIFFLYHKRTVIRKQKLLNEIIAGSDKREIE 578

Query: 439 EQLDLLFELAPEWISQKSTSSGDVLVCINELSNVESIRDRLEEAK 484
           EQLDLLFELAPEWI  K TS GDVLVCIN+L+NVES+R RLEEAK
Sbjct: 579 EQLDLLFELAPEWIYPKLTSGGDVLVCINKLANVESVRVRLEEAK 623

[Close]

BLAST of MELO3C023727 vs. NCBI nr
Match: gi|659093245|ref|XP_008447443.1| (PREDICTED: CDT1-like protein a, chloroplastic [Cucumis melo])

HSP 1 Score: 643.7 bits (1659), Expect = 2.7e-181
Identity = 342/470 (72.77%), Postives = 383/470 (81.49%), Query Frame = 1


Query: 19  RRFSYGHLAQFKFILPEAIVLKKVVVYDEQTCCMKPDLHISFNFAVLENKEDQYMQLRKL 78
           RRFSY HLAQ KFILPEAI+LKKVVV+DE+T CMKPDLHISFNF +LE+KEDQYMQLRKL
Sbjct: 157 RRFSYNHLAQLKFILPEAIMLKKVVVFDERTSCMKPDLHISFNFDILESKEDQYMQLRKL 216

Query: 79  FRARLSEFVSSYPETHDVPKDLLPNPFNFRSQDLVAKSNSLSSIKTSIEQLAPEQPMPSI 138
           FR RLSEF SS+PE  DVPKDLLPNPFNFRSQ+L  K+N LSS+KTSIEQL PEQPMPS 
Sbjct: 217 FRTRLSEFASSHPEIDDVPKDLLPNPFNFRSQNLFPKTNPLSSVKTSIEQLGPEQPMPSA 276

Query: 139 EGICFNHHSEENQGFRIVKSTMSISGSSKQKEFSGLSHFSPSFSRRFSQKVVDREIAIND 198
           EG+  NHH EENQGFRI+KST    G +K+KE  GLSHFSPS SR FSQKVVDRE+    
Sbjct: 277 EGLLSNHHLEENQGFRIIKSTDH--GPNKKKELLGLSHFSPSISRLFSQKVVDREM---- 336

Query: 199 QVTTPSNQVSSCTDVETNIDTESSVVASSTEPFSPIKVPSNSTCNVHCHENYASPLRSLA 258
                       T VETN+D E+S   S+T+PFSPIK+ SNST N+HC E YASP+ S  
Sbjct: 337 ----------EKTHVETNMDAETS---STTKPFSPIKLSSNSTSNLHCVEKYASPICSST 396

Query: 259 LALPTTPSNTTGRVTMMIECDQSAKANDIDSTPRKLVSTPTRLMTNTPAMPPPKRSSMTP 318
           L +PTTPSN  G V+M  E  Q AKANDIDSTP K VSTP RLM +TPA+  PKRSSMTP
Sbjct: 397 LPIPTTPSNMVGIVSMRKEDGQYAKANDIDSTPAKFVSTPDRLMASTPAISAPKRSSMTP 456

Query: 319 DDDPSFSTNKLVRRPPRSRSLVFDTPTKEYKNNDERDVSLENDIGDVLSPSLVQSIREKE 378
           DDD ++STNKLVRRPPRSRSLVFDTPTKE KN  + DVSL++DI DVLS SLVQSIREKE
Sbjct: 457 DDDFAYSTNKLVRRPPRSRSLVFDTPTKEDKNKVDTDVSLDDDILDVLSQSLVQSIREKE 516

Query: 379 RKVKEEQMPAITQAKRRQEMIANLPKLFNAIFFLYHKRTVIRRQELFHKIIASS----DK 438
           RK+KE+QMPAITQAKRRQ+MIA LPKLFNAIFFLYHKRTVI+R+EL +KII  S    D+
Sbjct: 517 RKIKEDQMPAITQAKRRQKMIAGLPKLFNAIFFLYHKRTVIKREELLNKIIVGSVDILDR 576

Query: 439 REIEEQLDLLFELAPEWISQKSTSS-GDVLVCINELSNVESIRDRLEEAK 484
           REIEEQLDLLFEL PEWISQKS S+ GDVLVCIN+LSNVES+R RLEEA+
Sbjct: 577 REIEEQLDLLFELVPEWISQKSASNGGDVLVCINKLSNVESVRVRLEEAR 607

[Close]

BLAST of MELO3C023727 vs. NCBI nr
Match: gi|778681050|ref|XP_004151978.2| (PREDICTED: CDT1-like protein a, chloroplastic [Cucumis sativus])

HSP 1 Score: 617.8 bits (1592), Expect = 1.6e-173
Identity = 331/470 (70.43%), Postives = 372/470 (79.15%), Query Frame = 1


Query: 19  RRFSYGHLAQFKFILPEAIVLKKVVVYDEQTCCMKPDLHISFNFAVLENKEDQYMQLRKL 78
           RRFSY HLAQ KFILPEAI+LKKVVV+   T CMKPDLHISFNF VLE+KEDQYMQLRKL
Sbjct: 157 RRFSYSHLAQLKFILPEAIMLKKVVVFYGLTSCMKPDLHISFNFGVLESKEDQYMQLRKL 216

Query: 79  FRARLSEFVSSYPETHDVPKDLLPNPFNFRSQDLVAKSNSLSSIKTSIEQLAPEQPMPSI 138
           FR RLSEFVSS+PE  D+PKD LPNPFNFRS +L  ++NSLSS+KTSIEQLAPEQP+PS 
Sbjct: 217 FRTRLSEFVSSHPEIDDIPKDSLPNPFNFRSLNLFPETNSLSSVKTSIEQLAPEQPLPSA 276

Query: 139 EGICFNHHSEENQGFRIVKSTMSISGSSKQKEFSGLSHFSPSFSRRFSQKVVDREIAIND 198
           E I  NHHSE NQGFRI+KSTM+  G +KQKE  GLSHFSP  SR FSQK V+ ++   D
Sbjct: 277 EDIPSNHHSENNQGFRIIKSTMTGHGPNKQKELFGLSHFSP-VSRLFSQKAVNIDVQTFD 336

Query: 199 QVTTPSNQVSSCTDVETNIDTESSVVASSTEPFSPIKVPSNSTCNVHCHENYASPLRSLA 258
                                     ASST+P SPIK+ SNST N+HC ENYASP+ S +
Sbjct: 337 --------------------------ASSTKPSSPIKLSSNSTSNLHCLENYASPICSSS 396

Query: 259 LALPTTPSNTTGRVTMMIECDQSAKANDIDSTPRKLVSTPTRLMTNTPAMPPPKRSSMTP 318
           L  PTTPSN  G VTM  E  QSAK NDIDSTP K VST  +LM +TPAM PPKRSSMTP
Sbjct: 397 LPNPTTPSNMVGIVTMRKEDGQSAKVNDIDSTPVKFVSTSDQLMASTPAMAPPKRSSMTP 456

Query: 319 DDDPSFSTNKLVRRPPRSRSLVFDTPTKEYKNNDERDVSLENDIGDVLSPSLVQSIREKE 378
           DDD S+STNKLVRRPPRSRSLVFDTPTKE KN DE DVSL+NDI DVLS SLVQSIREKE
Sbjct: 457 DDDFSYSTNKLVRRPPRSRSLVFDTPTKEDKNKDEIDVSLDNDILDVLSESLVQSIREKE 516

Query: 379 RKVKEEQMPAITQAKRRQEMIANLPKLFNAIFFLYHKRTVIRRQELFHKIIASS----DK 438
           RK+KEEQMPAITQAKRRQ++IANLPKLFNAIFFLYHKRTV++R+EL +KII  S    D+
Sbjct: 517 RKIKEEQMPAITQAKRRQKLIANLPKLFNAIFFLYHKRTVVKREELLNKIITGSVDILDR 576

Query: 439 REIEEQLDLLFELAPEWISQK-STSSGDVLVCINELSNVESIRDRLEEAK 484
           RE+EEQLDLLFEL P+WISQK +++ GDVLVCIN+LSNVES+  RL+EAK
Sbjct: 577 REVEEQLDLLFELVPDWISQKLASNGGDVLVCINKLSNVESVSVRLKEAK 599

[Close]

BLAST of MELO3C023727 vs. NCBI nr
Match: gi|922402777|ref|XP_013468524.1| (DNA replication factor CDT1-like protein [Medicago truncatula])

HSP 1 Score: 332.0 bits (850), Expect = 1.7e-87
Identity = 207/480 (43.12%), Postives = 290/480 (60.42%), Query Frame = 1


Query: 19  RRFSYGHLAQFKFILPEAIVLKKVVVYDEQTCCMKPDLHISFNFAVLENK-----EDQYM 78
           RRF++ HLAQ KFILPEAI +KK++V+DE+T CMKPDLH+S N   +E       E   M
Sbjct: 150 RRFTHAHLAQLKFILPEAIAIKKLLVFDERTSCMKPDLHVSINPDAVEFNAKLLSESGTM 209

Query: 79  QLRKLFRARLSEFVSSYPETHDVPKDLLPNPFNFRSQD----LVAKSNSLSSIKTSIEQL 138
            LRKLFR RL+EF  S+PE  +VP+++LP PF+   QD    ++   +S  ++K S+ + 
Sbjct: 210 SLRKLFRVRLNEFWKSHPEGDEVPEEMLPEPFSRPKQDPLVHMMKPPSSFPAVKLSVARA 269

Query: 139 APEQPMPSIEGICFNHHSEENQGFRIVKSTMSISGSSKQKEFSGLSHFSPSFSRRFSQKV 198
           + +        I  N     ++    V +  S+   +++   +  SH   SF RRFSQK+
Sbjct: 270 SSD--------IADNTDPANSESHVSVPAETSVEALNQKPAVA--SHMPQSFRRRFSQKL 329

Query: 199 VDREIAINDQVTTPSNQVSSCTDVETNIDTESSVVASSTEPFSPIKVPSNSTCNVHCHEN 258
            +    +      PS  V   ++    I++ S V   S   F  +   S+S  +   H+ 
Sbjct: 330 KENVQPLQSDSFQPS--VVPVSESSLRINSTSEVPKISPPEF--VVESSSSEAHPAIHDC 389

Query: 259 YASPLRSLALALPTTPSNTTGRVTMMIECDQSAKANDIDSTPRKLVSTPTRLMTNTPAMP 318
           +     +LA     TPS T   +      D S K  D  STP K VSTP RLM+ TPA+ 
Sbjct: 390 FTPSRVTLA-----TPSKT---IEYAESKDGSFKTVDAMSTPAKFVSTPARLMSATPALK 449

Query: 319 PPKRSSMTPDDDPSFSTNKLVRRPPRSRSLVFDTPTKEYKNNDERDVSLENDIGDVLSPS 378
           PPKRS MTPDD+ + S +KLV+RPPRSRSL FDTP K    ND   +S+++DI D+L  +
Sbjct: 450 PPKRSFMTPDDNSTSSPDKLVKRPPRSRSLKFDTPMK--NENDAGGLSIDDDIFDILPDN 509

Query: 379 LVQSIREKERKVKEEQMPAITQAKRRQEMIANLPKLFNAIFFLYH--KRTVIRRQELFHK 438
           L+ SI+EKER   EE+ PAI+QAK+R+++IA+LPKLFN I  ++H   R+VI ++EL  K
Sbjct: 510 LLHSIQEKERIAMEERDPAISQAKKRKKIIASLPKLFNMIHMMFHSINRSVITKEELMSK 569

Query: 439 IIASS----DKREIEEQLDLLFELAPEWISQKSTSSGDVLVCINELSNVESIRDRLEEAK 484
           II+S     D+ E+EEQL LL EL PEWIS+K+ SSGD+LV +N++ N ES+R  LEEAK
Sbjct: 570 IISSHRDIVDRSEVEEQLHLLLELVPEWISEKAASSGDMLVSVNKMLNPESLRASLEEAK 605

The following BLAST results are available for this feature:

BLAST of MELO3C023727 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CDT1A_ARATH	1.0e-55	34.10	CDT1-like protein a, chloroplastic OS=Arabidopsis thaliana GN=CDT1A PE=1 SV=1	[more]
CDT1B_ARATH	5.8e-19	35.86	CDT1-like protein b OS=Arabidopsis thaliana GN=CDT1B PE=1 SV=1	[more]

BLAST of MELO3C023727 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7I7_CUCSA	1.1e-173	70.43	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G394670 PE=4 SV=1	[more]
A0A072VLQ6_MEDTR	1.2e-87	43.13	DNA replication factor CDT1-like protein OS=Medicago truncatula GN=MTR_1g070170 ...	[more]
A0A067JRG9_JATCU	1.3e-86	42.07	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17709 PE=4 SV=1	[more]
A0A067FZ19_CITSI	1.7e-86	42.25	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g006819mg PE=4 SV=1	[more]
V4T9W2_9ROSI	1.5e-85	41.85	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019292mg PE=4 SV=1	[more]

BLAST of MELO3C023727 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G31270.1	5.7e-57	34.10	homolog of yeast CDT1 A	[more]
AT3G54710.1	3.3e-20	35.86	homolog of yeast CDT1 B homolog of yeast CDT1 B	[more]

BLAST of MELO3C023727 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659123165\|ref\|XP_008461526.1\|	8.6e-265	100.00	PREDICTED: CDT1-like protein b [Cucumis melo]	[more]
gi\|659111691\|ref\|XP_008455861.1\|	1.3e-231	88.39	PREDICTED: CDT1-like protein b [Cucumis melo]	[more]
gi\|659093245\|ref\|XP_008447443.1\|	2.7e-181	72.77	PREDICTED: CDT1-like protein a, chloroplastic [Cucumis melo]	[more]
gi\|778681050\|ref\|XP_004151978.2\|	1.6e-173	70.43	PREDICTED: CDT1-like protein a, chloroplastic [Cucumis sativus]	[more]
gi\|922402777\|ref\|XP_013468524.1\|	1.7e-87	43.13	DNA replication factor CDT1-like protein [Medicago truncatula]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011991	Winged helix-turn-helix DNA-binding domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C023727T1	MELO3C023727T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011991	Winged helix-turn-helix DNA-binding domain	unknown	SSF46785	"Winged helix" DNA-binding domain	coord: 17..105 score: 1.58
None	No IPR available	PANTHER	PTHR28637	FAMILY NOT NAMED	coord: 168..242 score: 5.1E-85coord: 18..139 score: 5.1E-85coord: 288..482 score: 5.1
None	No IPR available	PANTHER	PTHR28637:SF1	DNA REPLICATION FACTOR CDT1	coord: 168..242 score: 5.1E-85coord: 18..139 score: 5.1E-85coord: 288..482 score: 5.1

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C023727	Cucumber (Gy14) v1	cgymeB081
MELO3C023727	Cucurbita maxima (Rimu)	cmameB829
MELO3C023727	Cucurbita moschata (Rifu)	cmomeB813
MELO3C023727	Wild cucumber (PI 183967)	cpimeB544
MELO3C023727	Watermelon (Charleston Gray)	mewcgB165
MELO3C023727	Watermelon (97103) v1	mewmB187
MELO3C023727	Cucurbita pepo (Zucchini)	cpemeB297
MELO3C023727	Bottle gourd (USVL1VR-Ls)	lsimeB194
MELO3C023727	Cucumber (Gy14) v2	cgybmeB474
MELO3C023727	Silver-seed gourd	carmeB0086
MELO3C023727	Cucumber (Chinese Long) v3	cucmeB554
MELO3C023727	Watermelon (97103) v2	mewmbB212
MELO3C023727	Wax gourd	mewgoB242