MELO3C023721 (gene) Melon (DHL92) v3.5.1

NameMELO3C023721
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
Descriptionp300/CBP acetyltransferase-related protein-related
Locationchr1 : 5872824 .. 5873294 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTAGACAAGCTTTCTCAAGTAAAGGTGAAGGATGAGATTTTGTCCTCCTCAACCCTTCATTGCATAATTGCCATCCATAAGAACAAGGCTAAGCTAAAATGCCTCAAAACCAAACAAGACGGTAAATCAAAGGTTAAAACAGTGGATGATGAAGATGAAGAAGAAAAAGAGAAAGATGATGTTCCGCTAAAACGCAAACGACAAGGCGAGGAGGAGGCCTTAGGATCAAAGAAAATAAAAACCTTTAAGGATAAGGACTCTAAGGAAAACTTTTTATCTACATTCACTAAGAGTCCCAAAAAGAAGAAGCTCACCAATCTCCCTTCACTCAATAAATACAAATCCTCCAAAGCCACTAGCTCTCAAACTCCTACTAAGTCTAAAACGCCTCCACCACCTCCTAAAAAATCTAAATCGCCAACCATATCCCAAGAAATTCAAAATACCTCTTCCTCACCCAGGCAATAA

mRNA sequence

ATGTTAGACAAGCTTTCTCAAGTAAAGGTGAAGGATGAGATTTTGTCCTCCTCAACCCTTCATTGCATAATTGCCATCCATAAGAACAAGGCTAAGCTAAAATGCCTCAAAACCAAACAAGACGGTAAATCAAAGGTTAAAACAGTGGATGATGAAGATGAAGAAGAAAAAGAGAAAGATGATGTTCCGCTAAAACGCAAACGACAAGGCGAGGAGGAGGCCTTAGGATCAAAGAAAATAAAAACCTTTAAGGATAAGGACTCTAAGGAAAACTTTTTATCTACATTCACTAAGAGTCCCAAAAAGAAGAAGCTCACCAATCTCCCTTCACTCAATAAATACAAATCCTCCAAAGCCACTAGCTCTCAAACTCCTACTAAGTCTAAAACGCCTCCACCACCTCCTAAAAAATCTAAATCGCCAACCATATCCCAAGAAATTCAAAATACCTCTTCCTCACCCAGGCAATAA

Coding sequence (CDS)

ATGTTAGACAAGCTTTCTCAAGTAAAGGTGAAGGATGAGATTTTGTCCTCCTCAACCCTTCATTGCATAATTGCCATCCATAAGAACAAGGCTAAGCTAAAATGCCTCAAAACCAAACAAGACGGTAAATCAAAGGTTAAAACAGTGGATGATGAAGATGAAGAAGAAAAAGAGAAAGATGATGTTCCGCTAAAACGCAAACGACAAGGCGAGGAGGAGGCCTTAGGATCAAAGAAAATAAAAACCTTTAAGGATAAGGACTCTAAGGAAAACTTTTTATCTACATTCACTAAGAGTCCCAAAAAGAAGAAGCTCACCAATCTCCCTTCACTCAATAAATACAAATCCTCCAAAGCCACTAGCTCTCAAACTCCTACTAAGTCTAAAACGCCTCCACCACCTCCTAAAAAATCTAAATCGCCAACCATATCCCAAGAAATTCAAAATACCTCTTCCTCACCCAGGCAATAA

Protein sequence

MLDKLSQVKVKDEILSSSTLHCIIAIHKNKAKLKCLKTKQDGKSKVKTVDDEDEEEKEKDDVPLKRKRQGEEEALGSKKIKTFKDKDSKENFLSTFTKSPKKKKLTNLPSLNKYKSSKATSSQTPTKSKTPPPPPKKSKSPTISQEIQNTSSSPRQ*
BLAST of MELO3C023721 vs. TrEMBL
Match: A0A0A0LAN0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G263250 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.7e-19
Identity = 57/89 (64.04%), Postives = 70/89 (78.65%), Query Frame = 1

Query: 1   MLDKLSQVKVKDEILSSSTLHCIIAIHKNKAKLKCLKTKQDGKSKVKTVDDED-EEEKEK 60
           ML+KL QV+VKD I   STLH IIAIHKNKAK+KCLKTK +G   VK +DD+D EEE +K
Sbjct: 100 MLEKLPQVEVKDGIWLPSTLHRIIAIHKNKAKIKCLKTK-EGCKVVKEIDDDDVEEEDKK 159

Query: 61  DDVPLKRKRQGEEEALGSKKIKTFKDKDS 89
           D++P KRKRQ +E+ LGSKK K+ K +DS
Sbjct: 160 DNIPQKRKRQDKEDDLGSKKAKSSKIEDS 187

BLAST of MELO3C023721 vs. TrEMBL
Match: A0A0A0KTK5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G406560 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.3e-07
Identity = 43/119 (36.13%), Postives = 70/119 (58.82%), Query Frame = 1

Query: 20  LHCIIAIHKNKAKLKCLKTKQDG---KSKVKTVDDEDEEEKEKDDVPLKRKRQGEEEALG 79
           L+C+I +HKNKA+ K LK+K+     ++K   VD+++EE +++   PL  KR+G++E  G
Sbjct: 4   LNCMINLHKNKAERKRLKSKKMETIVENKEMEVDNDEEEREKEKQTPLVHKRKGKDEGSG 63

Query: 80  SKK-IKTFKDKDSKENF-LSTFTKSPKKKKLTNLPSLNKYKSSKATSSQTPTKSKTPPP 134
           SKK  K  + K+SK+ F L+ FT    +   T   SL+K  +   T +  P++    PP
Sbjct: 64  SKKQEKKPRAKESKDPFPLAIFTPHVAQTTKTTY-SLSKSPTRTPTKTTLPSQEHQCPP 121

BLAST of MELO3C023721 vs. NCBI nr
Match: gi|659123193|ref|XP_008461541.1| (PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Cucumis melo])

HSP 1 Score: 308.9 bits (790), Expect = 5.0e-81
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 1

Query: 1   MLDKLSQVKVKDEILSSSTLHCIIAIHKNKAKLKCLKTKQDGKSKVKTVDDEDEEEKEKD 60
           MLDKLSQVKVKDEILSSSTLHCIIAIHKNKAKLKCLKTKQDGKSKVKTVDDEDEEEKEKD
Sbjct: 1   MLDKLSQVKVKDEILSSSTLHCIIAIHKNKAKLKCLKTKQDGKSKVKTVDDEDEEEKEKD 60

Query: 61  DVPLKRKRQGEEEALGSKKIKTFKDKDSKENFLSTFTKSPKKKKLTNLPSLNKYKSSKAT 120
           DVPLKRKRQGEEEALGSKKIKTFKDKDSKENFLSTFTKSPKKKKLTNLPSLNKYKSSKAT
Sbjct: 61  DVPLKRKRQGEEEALGSKKIKTFKDKDSKENFLSTFTKSPKKKKLTNLPSLNKYKSSKAT 120

Query: 121 SSQTPTKSKTPPPPPKKSKSPTISQEIQNTSSSPRQ 157
           SSQTPTKSKTPPPPPKKSKSPTISQEIQNTSSSPRQ
Sbjct: 121 SSQTPTKSKTPPPPPKKSKSPTISQEIQNTSSSPRQ 156

BLAST of MELO3C023721 vs. NCBI nr
Match: gi|700202594|gb|KGN57727.1| (hypothetical protein Csa_3G263250 [Cucumis sativus])

HSP 1 Score: 104.0 bits (258), Expect = 2.5e-19
Identity = 57/89 (64.04%), Postives = 70/89 (78.65%), Query Frame = 1

Query: 1   MLDKLSQVKVKDEILSSSTLHCIIAIHKNKAKLKCLKTKQDGKSKVKTVDDED-EEEKEK 60
           ML+KL QV+VKD I   STLH IIAIHKNKAK+KCLKTK +G   VK +DD+D EEE +K
Sbjct: 100 MLEKLPQVEVKDGIWLPSTLHRIIAIHKNKAKIKCLKTK-EGCKVVKEIDDDDVEEEDKK 159

Query: 61  DDVPLKRKRQGEEEALGSKKIKTFKDKDS 89
           D++P KRKRQ +E+ LGSKK K+ K +DS
Sbjct: 160 DNIPQKRKRQDKEDDLGSKKAKSSKIEDS 187

BLAST of MELO3C023721 vs. NCBI nr
Match: gi|700195834|gb|KGN51011.1| (hypothetical protein Csa_5G406560 [Cucumis sativus])

HSP 1 Score: 63.2 bits (152), Expect = 4.8e-07
Identity = 43/119 (36.13%), Postives = 70/119 (58.82%), Query Frame = 1

Query: 20  LHCIIAIHKNKAKLKCLKTKQDG---KSKVKTVDDEDEEEKEKDDVPLKRKRQGEEEALG 79
           L+C+I +HKNKA+ K LK+K+     ++K   VD+++EE +++   PL  KR+G++E  G
Sbjct: 4   LNCMINLHKNKAERKRLKSKKMETIVENKEMEVDNDEEEREKEKQTPLVHKRKGKDEGSG 63

Query: 80  SKK-IKTFKDKDSKENF-LSTFTKSPKKKKLTNLPSLNKYKSSKATSSQTPTKSKTPPP 134
           SKK  K  + K+SK+ F L+ FT    +   T   SL+K  +   T +  P++    PP
Sbjct: 64  SKKQEKKPRAKESKDPFPLAIFTPHVAQTTKTTY-SLSKSPTRTPTKTTLPSQEHQCPP 121

BLAST of MELO3C023721 vs. NCBI nr
Match: gi|146236013|gb|AAS94096.2| (p80-coilin [Cyprinus carpio])

HSP 1 Score: 59.7 bits (143), Expect = 5.3e-06
Identity = 42/161 (26.09%), Postives = 76/161 (47.20%), Query Frame = 1

Query: 10  VKDEILSSSTLHCIIAIHKNKAKLKCLKTKQDGKSKVKTVDDEDEEEKEKDDVPLKRKRQ 69
           V+D       + C + ++  +A+ +  K+K+ G+       D   +++++D+  +     
Sbjct: 77  VRDNDSVRVKVSCPVQVNGTEAEAQNSKSKKRGREDETQTCDGLSKKQKQDNAQMNGLGP 136

Query: 70  GEEEALGSKKIKTFKDKDSKENF------------LSTFTKSPKKKKLTNLPSLNKYK-- 129
            E+E    KK K  K K++KE+             LST TKS     + +    N+ K  
Sbjct: 137 DEDEKKKKKKKKKKKKKEAKESITKPATPQKSTAALSTKTKSKSTSAVASSDKTNRTKNH 196

Query: 130 ---SSKATSSQTPTKSKTPPPPPKKSKSPTISQEIQNTSSS 154
              SS + SS+  ++ K PPP PK SK P ++ + ++T SS
Sbjct: 197 KPASSSSDSSEDESQKKAPPPKPKPSKKPCVAAQKESTDSS 237

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LAN0_CUCSA1.7e-1964.04Uncharacterized protein OS=Cucumis sativus GN=Csa_3G263250 PE=4 SV=1[more]
A0A0A0KTK5_CUCSA3.3e-0736.13Uncharacterized protein OS=Cucumis sativus GN=Csa_5G406560 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659123193|ref|XP_008461541.1|5.0e-81100.00PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Cucumis melo][more]
gi|700202594|gb|KGN57727.1|2.5e-1964.04hypothetical protein Csa_3G263250 [Cucumis sativus][more]
gi|700195834|gb|KGN51011.1|4.8e-0736.13hypothetical protein Csa_5G406560 [Cucumis sativus][more]
gi|146236013|gb|AAS94096.2|5.3e-0626.09p80-coilin [Cyprinus carpio][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C023721T1MELO3C023721T1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None