MELO3C023661 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C023661
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr1 : 7235312 .. 7235956 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGTAGCAAGATACAATATTGAGAAGTTTGATCGTAAGGAAGATTTTACGTTTTGGAAAGCAAAGATCAAAGCTATCATTGACCAACAAAAGACATTCAAAGCTCTCTGGATCCTAAAAAGCTACTTGTTACAAATGACTCACAAGAAGAAAGAAACTATGAAAAATGCAACTTATGTTTTTATAATTCTCAACCTACGTGGCAATGTTCTAAGGAAGGTCATTGATAAAGAAACAACTTATGGAATGTGGAAGAAGTTAGATGAACTTTATCAGTTCAAAGACTTACCAAACTGTGTATACATGAGGGAAAGGTTCTTTACCTTTAAAATGGATAGCAACAAGTCATTGATAGAAAATCTTGGAGAGTTCAAGAAGTTATCGACCGATTTCAAGGACTTGGAAAACAAGATTGGTGATGAAAATGAATCATTCATTTTGCTAAACCACTTCCAAATGCATTTAAAGAAGTCAAAATGGCTCTCAAATATGGAAATTGGAAGGCAAGAAATCACCATCGATGATATTATTCCAGGGATAAAAACCAGAGAACTAGAGTTTAATACACAAAGAAGAGATAAAGTCAATACTGAAGGATTGTTCTCAAAGGGTAAGAGCAAAAACAACTATAAAAGAAACTAA

mRNA sequence

ATGGCAGTAGCAAGATACAATATTGAGAAGTTTGATCGTAAGGAAGATTTTACGTTTTGGAAAGCAAAGATCAAAGCTATCATTGACCAACAAAAGACATTCAAAGCTCTCTGGATCCTAAAAAGCTACTTGTTACAAATGACTCACAAGAAGAAAGAAACTATGAAAAATGCAACTTATGTTTTTATAATTCTCAACCTACGTGGCAATGTTCTAAGGAAGGTCATTGATAAAGAAACAACTTATGGAATGTGGAAGAAGTTAGATGAACTTTATCAGTTCAAAGACTTACCAAACTGTGTATACATGAGGGAAAGGTTCTTTACCTTTAAAATGGATAGCAACAAGTCATTGATAGAAAATCTTGGAGAGTTCAAGAAGTTATCGACCGATTTCAAGGACTTGGAAAACAAGATTGGTGATGAAAATGAATCATTCATTTTGCTAAACCACTTCCAAATGCATTTAAAGAAGTCAAAATGGCTCTCAAATATGGAAATTGGAAGGCAAGAAATCACCATCGATGATATTATTCCAGGGATAAAAACCAGAGAACTAGAGTTTAATACACAAAGAAGAGATAAAGTCAATACTGAAGGATTGTTCTCAAAGGGTAAGAGCAAAAACAACTATAAAAGAAACTAA

Coding sequence (CDS)

ATGGCAGTAGCAAGATACAATATTGAGAAGTTTGATCGTAAGGAAGATTTTACGTTTTGGAAAGCAAAGATCAAAGCTATCATTGACCAACAAAAGACATTCAAAGCTCTCTGGATCCTAAAAAGCTACTTGTTACAAATGACTCACAAGAAGAAAGAAACTATGAAAAATGCAACTTATGTTTTTATAATTCTCAACCTACGTGGCAATGTTCTAAGGAAGGTCATTGATAAAGAAACAACTTATGGAATGTGGAAGAAGTTAGATGAACTTTATCAGTTCAAAGACTTACCAAACTGTGTATACATGAGGGAAAGGTTCTTTACCTTTAAAATGGATAGCAACAAGTCATTGATAGAAAATCTTGGAGAGTTCAAGAAGTTATCGACCGATTTCAAGGACTTGGAAAACAAGATTGGTGATGAAAATGAATCATTCATTTTGCTAAACCACTTCCAAATGCATTTAAAGAAGTCAAAATGGCTCTCAAATATGGAAATTGGAAGGCAAGAAATCACCATCGATGATATTATTCCAGGGATAAAAACCAGAGAACTAGAGTTTAATACACAAAGAAGAGATAAAGTCAATACTGAAGGATTGTTCTCAAAGGGTAAGAGCAAAAACAACTATAAAAGAAACTAA

Protein sequence

MAVARYNIEKFDRKEDFTFWKAKIKAIIDQQKTFKALWILKSYLLQMTHKKKETMKNATYVFIILNLRGNVLRKVIDKETTYGMWKKLDELYQFKDLPNCVYMRERFFTFKMDSNKSLIENLGEFKKLSTDFKDLENKIGDENESFILLNHFQMHLKKSKWLSNMEIGRQEITIDDIIPGIKTRELEFNTQRRDKVNTEGLFSKGKSKNNYKRN*

Homology

[Close]

BLAST of MELO3C023661 vs. Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 8.6e-15
Identity = 59/230 (25.65%), Postives = 108/230 (46.96%), Query Frame = 1


Query: 1   MAVARYNIEKFDRKEDFTFWKAKIKAIIDQQKTFKALWILKSYLLQMTHKKKETMKNATY 60
           M+  +Y + KF+    F+ W+ +++ ++ QQ   K        +L +  KK +TMK   +
Sbjct: 1   MSGVKYEVAKFNGDNGFSTWQRRMRDLLIQQGLHK--------VLDVDSKKPDTMKAEDW 60

Query: 61  V--------FIILNLRGNVLRKVIDKETTYGMWKKLDELYQFKDLPNCVYMRERFFTFKM 120
                     I L+L  +V+  +ID++T  G+W +L+ LY  K L N +Y++++ +   M
Sbjct: 61  ADLDERAASAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHM 120

Query: 121 DSNKSLIENLGEFKKLSTDFKDLENKIGDENESFILLNHFQMHLKKSKWLSNMEIGRQEI 180
               + + +L  F  L T   +L  KI +E+++ +LLN   +        + +  G+  I
Sbjct: 121 SEGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLN--SLPSSYDNLATTILHGKTTI 180

Query: 181 TIDDIIPGIKTRELEFNTQRRDKVNTEG--LFSKG------KSKNNYKRN 215
            + D+     T  L  N + R K   +G  L ++G      +S NNY R+
Sbjct: 181 ELKDV-----TSALLLNEKMRKKPENQGQALITEGRGRSYQRSSNNYGRS 215

[Close]

BLAST of MELO3C023661 vs. TrEMBL
Match: A0A151TCU2_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=KK1_019424 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.9e-25
Identity = 67/213 (31.46%), Postives = 118/213 (55.40%), Query Frame = 1


Query: 1   MAVARYNIEKFDRKEDFTFWKAKIKAIIDQQKTFKALWILKSYLLQMTHKKKETMKNATY 60
           M  A+Y +EKF  + DF  W+ K++A++  Q    AL            ++++ M+   +
Sbjct: 1   MGSAKYEVEKFTGQNDFGLWRLKMRALLVHQGLVDALAGEAKAENATVDEERKKMQEKAH 60

Query: 61  VFIILNLRGNVLRKVIDKETTYGMWKKLDELYQFKDLPNCVYMRERFFTFKMDSNKSLIE 120
             IIL+L   VLR+V  ++T  G+W KL+ LY  K L N +Y+++  ++FKM+ +K + E
Sbjct: 61  SAIILSLGDKVLRQVSKEKTAAGIWSKLESLYMTKSLVNRLYLKQSLYSFKMNEDKPVGE 120

Query: 121 NLGEFKKLSTDFKDLENKIGDENESFILLNHFQMHLKKSKWLSNMEIGRQEITIDDIIPG 180
            L  F KL  D ++++  I DE+++ +LL    +    S +   M  GR  ++ID++   
Sbjct: 121 QLDHFNKLILDLENIDVTIDDEDQALLLL--CSLPRAYSHFKETMLFGRDSVSIDEVQAA 180

Query: 181 IKTRELEFNTQRRDKVNTEGLFSKGKSKNNYKR 214
           I ++EL    +++  VN EGL +KGK+   Y +
Sbjct: 181 INSKELNERKEKKPTVNGEGLTAKGKTSKKYSK 211

[Close]

BLAST of MELO3C023661 vs. TrEMBL
Match: A0A151SF29_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=KK1_024760 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 4.9e-25
Identity = 66/213 (30.99%), Postives = 117/213 (54.93%), Query Frame = 1


Query: 1   MAVARYNIEKFDRKEDFTFWKAKIKAIIDQQKTFKALWILKSYLLQMTHKKKETMKNATY 60
           M   +Y +EKF  + DF  W+ K++A++  Q    AL            ++++ M+   +
Sbjct: 1   MGSTKYEVEKFTGQNDFGLWRLKMRALLVHQGLVDALAGEAKAENATVDEERKKMQEKAH 60

Query: 61  VFIILNLRGNVLRKVIDKETTYGMWKKLDELYQFKDLPNCVYMRERFFTFKMDSNKSLIE 120
             IIL+L   VLR+V  ++T  G+W KL+ LY  K L N +Y+++  ++F M+ NK + E
Sbjct: 61  SAIILSLGDKVLRQVSKEKTAAGIWSKLESLYMTKSLVNRLYLKQSLYSFNMNENKPVGE 120

Query: 121 NLGEFKKLSTDFKDLENKIGDENESFILLNHFQMHLKKSKWLSNMEIGRQEITIDDIIPG 180
            L +F KL  D ++++  I DE+++ +LL    +    S +   M  GR  ++ID++   
Sbjct: 121 QLDQFNKLILDLENIDVTIDDEDQALLLL--CSLPRAYSHFKETMLFGRDSVSIDEVQAA 180

Query: 181 IKTRELEFNTQRRDKVNTEGLFSKGKSKNNYKR 214
           I ++EL    +++  VN EGL +KGK+   Y +
Sbjct: 181 INSKELNERKEKKPTVNGEGLTAKGKTSKKYSK 211

[Close]

BLAST of MELO3C023661 vs. TrEMBL
Match: A0A151TC89_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=KK1_019262 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.7e-23
Identity = 68/210 (32.38%), Postives = 120/210 (57.14%), Query Frame = 1


Query: 1   MAVARYNIEKFDRKEDFTFWKAKIKAIIDQQKTFKALWILKSYLLQMTHKKKETMKNATY 60
           M   +Y+IEKF  + DF  W+ K++AI+ QQ   +A+   +  +  +T K+K  M     
Sbjct: 1   MGNTKYDIEKFSSENDFGLWRIKMEAILIQQGCAEAIKGDEKMVSSLTQKEKTNMIEKAR 60

Query: 61  VFIILNLRGNVLRKVIDKETTYGMWKKLDELYQFKDLPNCVYMRERFFTFKMDSNKSLIE 120
             IIL L    LR+V  ++T   MW KL+ LY  K L + + +++R ++FKM   KS+++
Sbjct: 61  SAIILCLGDKALREVAREKTAAAMWLKLESLYMTKSLAHRLCLKQRLYSFKMTETKSIVD 120

Query: 121 NLGEFKKLSTDFKDLENKIGDENESFILLNHFQMHLKKSKWLSNMEIGR-QEITIDDIIP 180
            L EF K+  D +++E ++ DE+++ +LLN    + +  K    +  G+ Q+IT+D++  
Sbjct: 121 QLAEFNKILDDLENIEVQLEDEDKALLLLNSLPRNYEHFK--DAILYGKEQDITLDEVQT 180

Query: 181 GIKTRELEFNTQRRDKVNTEGL-FSKGKSK 209
            I+T+EL+     +   N E L  S+G+S+
Sbjct: 181 SIRTKELQRQQDNKTDDNGESLNVSRGRSE 208

[Close]

BLAST of MELO3C023661 vs. TrEMBL
Match: A0A151TCD0_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=KK1_019277 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 6.0e-23
Identity = 68/210 (32.38%), Postives = 119/210 (56.67%), Query Frame = 1


Query: 1   MAVARYNIEKFDRKEDFTFWKAKIKAIIDQQKTFKALWILKSYLLQMTHKKKETMKNATY 60
           M   +Y+IEKF  + DF  W+ K++AI+ QQ   +A+   +     +T K+K  M     
Sbjct: 1   MGNTKYDIEKFSGENDFGLWRIKMEAILIQQGCAEAIKGEEKMSSSLTQKEKTNMIEKAR 60

Query: 61  VFIILNLRGNVLRKVIDKETTYGMWKKLDELYQFKDLPNCVYMRERFFTFKMDSNKSLIE 120
             IIL L    LR+V  ++T   MW KL+ LY  K L + + +++R ++FKM   KS+++
Sbjct: 61  SAIILCLGDKALREVAREKTAAAMWLKLESLYMTKSLAHRLCLKQRLYSFKMTETKSIVD 120

Query: 121 NLGEFKKLSTDFKDLENKIGDENESFILLNHFQMHLKKSKWLSNMEIGR-QEITIDDIIP 180
            L EF K+  D +++E ++ DE+++ +LLN    + +  K    +  G+ Q+IT+D++  
Sbjct: 121 QLAEFNKILDDLENIEVQLEDEDKALLLLNSLPRNYEHFK--DAILYGKEQDITLDEVQT 180

Query: 181 GIKTRELEFNTQRRDKVNTEGL-FSKGKSK 209
            I+T+EL+     +   N E L  S+G+S+
Sbjct: 181 SIRTKELQRQQDNKTDDNGESLNVSRGRSE 208

[Close]

BLAST of MELO3C023661 vs. TrEMBL
Match: A5AQ94_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017821 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 6.0e-23
Identity = 65/212 (30.66%), Postives = 117/212 (55.19%), Query Frame = 1


Query: 1   MAVARYNIEKFDRKEDFTFWKAKIKAIIDQQKTFKALWILKSYLLQMTHKKKETMKNATY 60
           M   +  IE+F  K DF  W+ ++KAI+ QQ    AL       + MT K+K  +    Y
Sbjct: 1   MGSIKSEIERFIGKNDFNVWRMRMKAILFQQGVKDALKDESELPVTMTAKEKSDIDEKAY 60

Query: 61  VFIILNLRGNVLRKVIDKETTYGMWKKLDELYQFKDLPNCVYMRERFFTFKMDSNKSLIE 120
             IIL L    LR+  ++ T  G+W KL++LY    L N +Y++ER + FKM  ++S+ +
Sbjct: 61  HLIILALGDKALREFSEETTAKGVWNKLEQLYMQNSLSNRLYLKERLYGFKMQEDRSIAD 120

Query: 121 NLGEFKKLSTDFKDLENKIGDENESFILLNHFQMHLKKSKWLSNMEIGRQEITIDDIIPG 180
           NL +F K+  +  ++  K+ DE+++ ++L    +    S +   M+ GR+ +T++++   
Sbjct: 121 NLDDFAKIVLEMSNIGIKVDDEDKAVLVLK--SLPGLYSNFKETMKYGRKTLTLEEVQSA 180

Query: 181 IKTRELEFNTQRRDKVNTEGLFSKGKSKNNYK 213
           ++++ELE    ++   N EGL  +G+ K+  K
Sbjct: 181 LRSKELEL---KKKGSNGEGLSIRGRKKDILK 207

[Close]

BLAST of MELO3C023661 vs. NCBI nr
Match: gi|659123171|ref|XP_008461529.1| (PREDICTED: uncharacterized protein LOC103500101 [Cucumis melo])

HSP 1 Score: 435.6 bits (1119), Expect = 4.9e-119
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 1


Query: 1   MAVARYNIEKFDRKEDFTFWKAKIKAIIDQQKTFKALWILKSYLLQMTHKKKETMKNATY 60
           MAVARYNIEKFDRKEDFTFWKAKIKAIIDQQKTFKALWILKSYLLQMTHKKKETMKNATY
Sbjct: 1   MAVARYNIEKFDRKEDFTFWKAKIKAIIDQQKTFKALWILKSYLLQMTHKKKETMKNATY 60

Query: 61  VFIILNLRGNVLRKVIDKETTYGMWKKLDELYQFKDLPNCVYMRERFFTFKMDSNKSLIE 120
           VFIILNLRGNVLRKVIDKETTYGMWKKLDELYQFKDLPNCVYMRERFFTFKMDSNKSLIE
Sbjct: 61  VFIILNLRGNVLRKVIDKETTYGMWKKLDELYQFKDLPNCVYMRERFFTFKMDSNKSLIE 120

Query: 121 NLGEFKKLSTDFKDLENKIGDENESFILLNHFQMHLKKSKWLSNMEIGRQEITIDDIIPG 180
           NLGEFKKLSTDFKDLENKIGDENESFILLNHFQMHLKKSKWLSNMEIGRQEITIDDIIPG
Sbjct: 121 NLGEFKKLSTDFKDLENKIGDENESFILLNHFQMHLKKSKWLSNMEIGRQEITIDDIIPG 180

Query: 181 IKTRELEFNTQRRDKVNTEGLFSKGKSKNNYKRN 215
           IKTRELEFNTQRRDKVNTEGLFSKGKSKNNYKRN
Sbjct: 181 IKTRELEFNTQRRDKVNTEGLFSKGKSKNNYKRN 214

[Close]

BLAST of MELO3C023661 vs. NCBI nr
Match: gi|1012353628|gb|KYP64816.1| (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan])

HSP 1 Score: 123.6 bits (309), Expect = 4.1e-25
Identity = 67/213 (31.46%), Postives = 118/213 (55.40%), Query Frame = 1


Query: 1   MAVARYNIEKFDRKEDFTFWKAKIKAIIDQQKTFKALWILKSYLLQMTHKKKETMKNATY 60
           M  A+Y +EKF  + DF  W+ K++A++  Q    AL            ++++ M+   +
Sbjct: 1   MGSAKYEVEKFTGQNDFGLWRLKMRALLVHQGLVDALAGEAKAENATVDEERKKMQEKAH 60

Query: 61  VFIILNLRGNVLRKVIDKETTYGMWKKLDELYQFKDLPNCVYMRERFFTFKMDSNKSLIE 120
             IIL+L   VLR+V  ++T  G+W KL+ LY  K L N +Y+++  ++FKM+ +K + E
Sbjct: 61  SAIILSLGDKVLRQVSKEKTAAGIWSKLESLYMTKSLVNRLYLKQSLYSFKMNEDKPVGE 120

Query: 121 NLGEFKKLSTDFKDLENKIGDENESFILLNHFQMHLKKSKWLSNMEIGRQEITIDDIIPG 180
            L  F KL  D ++++  I DE+++ +LL    +    S +   M  GR  ++ID++   
Sbjct: 121 QLDHFNKLILDLENIDVTIDDEDQALLLL--CSLPRAYSHFKETMLFGRDSVSIDEVQAA 180

Query: 181 IKTRELEFNTQRRDKVNTEGLFSKGKSKNNYKR 214
           I ++EL    +++  VN EGL +KGK+   Y +
Sbjct: 181 INSKELNERKEKKPTVNGEGLTAKGKTSKKYSK 211

[Close]

BLAST of MELO3C023661 vs. NCBI nr
Match: gi|1012342183|gb|KYP53379.1| (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan])

HSP 1 Score: 122.9 bits (307), Expect = 7.0e-25
Identity = 66/213 (30.99%), Postives = 117/213 (54.93%), Query Frame = 1


Query: 1   MAVARYNIEKFDRKEDFTFWKAKIKAIIDQQKTFKALWILKSYLLQMTHKKKETMKNATY 60
           M   +Y +EKF  + DF  W+ K++A++  Q    AL            ++++ M+   +
Sbjct: 1   MGSTKYEVEKFTGQNDFGLWRLKMRALLVHQGLVDALAGEAKAENATVDEERKKMQEKAH 60

Query: 61  VFIILNLRGNVLRKVIDKETTYGMWKKLDELYQFKDLPNCVYMRERFFTFKMDSNKSLIE 120
             IIL+L   VLR+V  ++T  G+W KL+ LY  K L N +Y+++  ++F M+ NK + E
Sbjct: 61  SAIILSLGDKVLRQVSKEKTAAGIWSKLESLYMTKSLVNRLYLKQSLYSFNMNENKPVGE 120

Query: 121 NLGEFKKLSTDFKDLENKIGDENESFILLNHFQMHLKKSKWLSNMEIGRQEITIDDIIPG 180
            L +F KL  D ++++  I DE+++ +LL    +    S +   M  GR  ++ID++   
Sbjct: 121 QLDQFNKLILDLENIDVTIDDEDQALLLL--CSLPRAYSHFKETMLFGRDSVSIDEVQAA 180

Query: 181 IKTRELEFNTQRRDKVNTEGLFSKGKSKNNYKR 214
           I ++EL    +++  VN EGL +KGK+   Y +
Sbjct: 181 INSKELNERKEKKPTVNGEGLTAKGKTSKKYSK 211

[Close]

BLAST of MELO3C023661 vs. NCBI nr
Match: gi|747053728|ref|XP_011073037.1| (PREDICTED: retrovirus-related Pol polyprotein from transposon TNT 1-94 [Sesamum indicum])

HSP 1 Score: 122.5 bits (306), Expect = 9.1e-25
Identity = 70/206 (33.98%), Postives = 116/206 (56.31%), Query Frame = 1


Query: 3   VARYNIEKFDRKEDFTFWKAKIKAIIDQQKTFKALWILKSYLLQMTHKKKETMKNATYVF 62
           +A Y+++ FD K DF+ W+ K+K I+ QQK FKA  I   Y   +T +KK       Y  
Sbjct: 1   MAGYSLQPFDGKTDFSIWQQKMKGILIQQKVFKA--IDGKYAENITEEKKLENDEFAYSS 60

Query: 63  IILNLRGNVLRKVIDKETTYGMWKKLDELYQFKDLPNCVYMRERFFTFKMDSNKSLIENL 122
           I+LNL   VLRKV   E++  +W KL+EL+    LPN +++ E+ F +K+D +K++ ENL
Sbjct: 61  IVLNLSDTVLRKVGKLESSKALWDKLEELFTEISLPNKLFLLEKIFRYKLDLSKNIDENL 120

Query: 123 GEFKKLSTDFKDLENKIGDENESFILLNHFQMHLKKSKWLSNMEIGRQEITIDDIIPGIK 182
            +F KL  D K   +K  DE    +LLN         K  + ++ GR  I ++ ++ G+K
Sbjct: 121 DDFTKLIQDIKLAGDKYIDEYSPIVLLNAIPESFSDVK--AAIKYGRDSINLETVVNGLK 180

Query: 183 TRELEFNTQRRDKVNTEGLFSKGKSK 209
           ++EL+    +  + + E    +G+++
Sbjct: 181 SKELDLKVNKPSQSHYEINSVRGRTR 202

[Close]

BLAST of MELO3C023661 vs. NCBI nr
Match: gi|747046711|ref|XP_011100917.1| (PREDICTED: uncharacterized protein LOC105179028 [Sesamum indicum])

HSP 1 Score: 121.3 bits (303), Expect = 2.0e-24
Identity = 66/187 (35.29%), Postives = 109/187 (58.29%), Query Frame = 1


Query: 6   YNIEKFDRKEDFTFWKAKIKAIIDQQKTFKALWILKSYLLQMTHKKKETMKNATYVFIIL 65
           Y+++ FD K DF+ W+ K+K I+ QQK FKA  I   Y   ++ +KK       Y  IIL
Sbjct: 4   YSLQSFDGKSDFSIWQQKMKGILIQQKVFKA--IDSKYTDNISDEKKIQNDEFAYSSIIL 63

Query: 66  NLRGNVLRKVIDKETTYGMWKKLDELYQFKDLPNCVYMRERFFTFKMDSNKSLIENLGEF 125
           NL  NVLRKV  + ++  +W+KL++LY    LP+ +++ E+ F +K+D +KS+ ENL +F
Sbjct: 64  NLSDNVLRKVGKQSSSKDLWEKLEDLYTETSLPSKLFLLEKKFHYKLDLSKSIDENLDDF 123

Query: 126 KKLSTDFKDLENKIGDENESFILLNHFQMHLKKSKWLSNMEIGRQEITIDDIIPGIKTRE 185
            KL  D K   +K  DE    +LLN        +K  + ++ GR  + +D ++ G+K++E
Sbjct: 124 TKLIQDIKLTGDKNIDEYSPIVLLNAIPKSYSDAK--AAIKYGRDSVNLDTVVNGLKSKE 183

Query: 186 LEFNTQR 193
           ++    +
Sbjct: 184 MDLKVSK 186

The following BLAST results are available for this feature:

BLAST of MELO3C023661 vs. Swiss-Prot


Match Name	E-value	Identity	Description
POLX_TOBAC	8.6e-15	25.65	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]

BLAST of MELO3C023661 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A151TCU2_CAJCA	2.9e-25	31.46	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=...	[more]
A0A151SF29_CAJCA	4.9e-25	30.99	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=...	[more]
A0A151TC89_CAJCA	2.7e-23	32.38	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=...	[more]
A0A151TCD0_CAJCA	6.0e-23	32.38	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=...	[more]
A5AQ94_VITVI	6.0e-23	30.66	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017821 PE=4 SV=1	[more]

BLAST of MELO3C023661 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659123171\|ref\|XP_008461529.1\|	4.9e-119	100.00	PREDICTED: uncharacterized protein LOC103500101 [Cucumis melo]	[more]
gi\|1012353628\|gb\|KYP64816.1\|	4.1e-25	31.46	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]	[more]
gi\|1012342183\|gb\|KYP53379.1\|	7.0e-25	30.99	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]	[more]
gi\|747053728\|ref\|XP_011073037.1\|	9.1e-25	33.98	PREDICTED: retrovirus-related Pol polyprotein from transposon TNT 1-94 [Sesamum ...	[more]
gi\|747046711\|ref\|XP_011100917.1\|	2.0e-24	35.29	PREDICTED: uncharacterized protein LOC105179028 [Sesamum indicum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005488	binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C023661T1	MELO3C023661T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34676	FAMILY NOT NAMED	coord: 11..207 score: 6.8
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 56..185 score: 2.9

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C023661	Cucurbita pepo (Zucchini)	cpemeB712
MELO3C023661	Bottle gourd (USVL1VR-Ls)	lsimeB199
MELO3C023661	Cucumber (Gy14) v2	cgybmeB479
MELO3C023661	Watermelon (97103) v2	mewmbB220
MELO3C023661	Wax gourd	mewgoB247
MELO3C023661	Cucumber (Gy14) v1	cgymeB085
MELO3C023661	Cucumber (Gy14) v1	cgymeB410
MELO3C023661	Cucurbita maxima (Rimu)	cmameB019
MELO3C023661	Cucurbita maxima (Rimu)	cmameB396
MELO3C023661	Cucurbita moschata (Rifu)	cmomeB008
MELO3C023661	Cucurbita moschata (Rifu)	cmomeB387
MELO3C023661	Wild cucumber (PI 183967)	cpimeB548
MELO3C023661	Cucumber (Chinese Long) v2	cumeB528
MELO3C023661	Watermelon (Charleston Gray)	mewcgB172
MELO3C023661	Watermelon (97103) v1	mewmB193