MELO3C023651 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C023651
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionATP-dependent RNA helicase dbp9
Locationchr1 : 7476098 .. 7476597 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAGTCGGGCGAAAAAGCAATGCAGGTCGATCGGGTTTGGTTTATTAAAATTAGTGAATTGTTTTTCGGCCGAATTAAAGCTTAGGGTCGGTCGGTTTACCAAACCGACCGAACCGACCCTTTTTAAAAAACAATTATATATATATATATATATATATATTATTTTATAAATTAGGTTATTTTTCTCTCCCTCGCCAGCCGTCGCCTCCCTCCCCCACACTCGCCAAATTGCCATCGCCATCTCCCTCACGCTTTCGTCGCCGGTAAGTTCATCATCTCCTTCACAGTATCCCATCGTTCGTCATTCTGCTGCCGGCCGTTCCAAGTTACAGTTGTCGTTCGTCATTCCGTCGTCAGTCATCCCTCATAATCATCTCGCCATTCGTCATCTCCCTCACAGTCATCTCCAATCGCAAGTTGCCATCGGCATTTTATCATCTGCCATTGGACGTTCATCATCTCCAATCGCAAGTTGCCCTCTTCGCTGCCGTCAGTAA

mRNA sequence

ATGTCAGTCGGGCGAAAAAGCAATGCAGGTCGATCGGCCGTCGCCTCCCTCCCCCACACTCGCCAAATTGCCATCGCCATCTCCCTCACGCTTTCGTCGCCGGTAAGTTCATCATCTCCTTCACAGTATCCCATCGTTCGTCATTCTGCTGCCGGCCGTTCCAAGTTACAGTTGTCGTTCGTCATTCCGTCGTCAGTCATCCCTCATAATCATCTCGCCATTCGTCATCTCCCTCACAGTCATCTCCAATCGCAAGTTGCCATCGGCATTTTATCATCTGCCATTGGACGTTCATCATCTCCAATCGCAAGTTGCCCTCTTCGCTGCCGTCAGTAA

Coding sequence (CDS)

ATGTCAGTCGGGCGAAAAAGCAATGCAGGTCGATCGGCCGTCGCCTCCCTCCCCCACACTCGCCAAATTGCCATCGCCATCTCCCTCACGCTTTCGTCGCCGGTAAGTTCATCATCTCCTTCACAGTATCCCATCGTTCGTCATTCTGCTGCCGGCCGTTCCAAGTTACAGTTGTCGTTCGTCATTCCGTCGTCAGTCATCCCTCATAATCATCTCGCCATTCGTCATCTCCCTCACAGTCATCTCCAATCGCAAGTTGCCATCGGCATTTTATCATCTGCCATTGGACGTTCATCATCTCCAATCGCAAGTTGCCCTCTTCGCTGCCGTCAGTAA

Protein sequence

MSVGRKSNAGRSAVASLPHTRQIAIAISLTLSSPVSSSSPSQYPIVRHSAAGRSKLQLSFVIPSSVIPHNHLAIRHLPHSHLQSQVAIGILSSAIGRSSSPIASCPLRCRQ*
Homology
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BLAST of MELO3C023651 vs. NCBI nr
Match: gi|659113935|ref|XP_008456828.1| (PREDICTED: uncharacterized protein DDB_G0271670-like [Cucumis melo])

HSP 1 Score: 93.2 bits (230), Expect = 3.1e-16
Identity = 56/103 (54.37%), Postives = 68/103 (66.02%), Query Frame = 1 

Query: 1   MSVGRKSNAGRSAVASLPHTRQIAIAISLTLS-SPVSSSSPSQYPIVRHSAAGRSKLQLS 60
           MSVGRK    +S+  SL  T+  + +  L    +  SSSSP QYP VR+S AGRSKLQ  
Sbjct: 99  MSVGRKRM--QSSPPSLTLTKSPSPSPILPHGFATASSSSPLQYPAVRYSVAGRSKLQFL 158

Query: 61  FVIPSSVIPHNHLAIRHLPHSHLQSQVAIGILSSAIGRSSSPI 103
           FVIPSSV+P NH  +RHL HSHLQSQ  +G LSS +  SSS +
Sbjct: 159 FVIPSSVVPDNHPVVRHLSHSHLQSQDVVGRLSSVVDSSSSVV 199

The following BLAST results are available for this feature:
BLAST of MELO3C023651 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659113935|ref|XP_008456828.1|3.1e-1654.37PREDICTED: uncharacterized protein DDB_G0271670-like [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C023651T1MELO3C023651T1mRNA