MELO3C023639 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C023639
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Transposon protein, putative, CACTA, En/Spm sub-class
Location	chr1 : 7774751 .. 7775338 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAGAAGGGTTCAAATGAAGTTTATGTTGATCGAGCTAAAATGTGGAAGAAAGCTCGAGTTAACAAACAAGGACAGTACGATAACGACGAAATTCAGCAAGTCGTCCATAAAATAGTAAGTCATTACATGTAAATCACACATTTCAATTATCCATTACATAAGCAATCATTTCTATAACTTACATTAATTTTGCTATCTTTTTAGGATGAGATAGCAATGAATACAGATTCATCGTCTGTGAATAGACACTGTTCGAATGATGTGTTAACCCAAGCATTGGGTACAAAAGAGCACAATGGTCGTGTGCGTGGGGTTGGTGGATACGTTACTTCAACAACGTACTTTCATTCAGTTAAGAAAACATCAAAAGATGAGGCTAACATTCTAGTTGAGAATGAAGAACTCCGTAGGCGAGTTAGTGAATTAGAGGCACAAATTCGCTCAAACTTATCTACACCATTGTCTGCACACGAGAGTTGTTCAAGGCCAATAATGTTAGAGGGGATTGAAGAGAAGGATAAGAGAATAGAAGTGGAATCGTTGGACAAACCAAAAGAGAAGGAAAAGAAAGGAAGGAGGTGA

mRNA sequence

ATGAAGAAGAAGGGTTCAAATGAAGTTTATGTTGATCGAGCTAAAATGTGGAAGAAAGCTCGAGTTAACAAACAAGGACAGTACGATAACGACGAAATTCAGCAAGTCGTCCATAAAATAGATGAGATAGCAATGAATACAGATTCATCGTCTGTGAATAGACACTGTTCGAATGATGTGTTAACCCAAGCATTGGGTACAAAAGAGCACAATGGTCGTGTGCGTGGGGTTGGTGGATACGTTACTTCAACAACGTACTTTCATTCAGTTAAGAAAACATCAAAAGATGAGGCTAACATTCTAGTTGAGAATGAAGAACTCCGTAGGCGAGTTAGTGAATTAGAGGCACAAATTCGCTCAAACTTATCTACACCATTGTCTGCACACGAGAGTTGTTCAAGGCCAATAATGTTAGAGGGGATTGAAGAGAAGGATAAGAGAATAGAAGTGGAATCGTTGGACAAACCAAAAGAGAAGGAAAAGAAAGGAAGGAGGTGA

Coding sequence (CDS)

ATGAAGAAGAAGGGTTCAAATGAAGTTTATGTTGATCGAGCTAAAATGTGGAAGAAAGCTCGAGTTAACAAACAAGGACAGTACGATAACGACGAAATTCAGCAAGTCGTCCATAAAATAGATGAGATAGCAATGAATACAGATTCATCGTCTGTGAATAGACACTGTTCGAATGATGTGTTAACCCAAGCATTGGGTACAAAAGAGCACAATGGTCGTGTGCGTGGGGTTGGTGGATACGTTACTTCAACAACGTACTTTCATTCAGTTAAGAAAACATCAAAAGATGAGGCTAACATTCTAGTTGAGAATGAAGAACTCCGTAGGCGAGTTAGTGAATTAGAGGCACAAATTCGCTCAAACTTATCTACACCATTGTCTGCACACGAGAGTTGTTCAAGGCCAATAATGTTAGAGGGGATTGAAGAGAAGGATAAGAGAATAGAAGTGGAATCGTTGGACAAACCAAAAGAGAAGGAAAAGAAAGGAAGGAGGTGA

Protein sequence

MKKKGSNEVYVDRAKMWKKARVNKQGQYDNDEIQQVVHKIDEIAMNTDSSSVNRHCSNDVLTQALGTKEHNGRVRGVGGYVTSTTYFHSVKKTSKDEANILVENEELRRRVSELEAQIRSNLSTPLSAHESCSRPIMLEGIEEKDKRIEVESLDKPKEKEKKGRR*

Homology

[Close]

BLAST of MELO3C023639 vs. TrEMBL
Match: D7SQ25_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g01850 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.5e-13
Identity = 53/141 (37.59%), Postives = 78/141 (55.32%), Query Frame = 1


Query: 1   MKKKG--SNEVYVDRAKMWKKARVNKQGQYDNDEIQQVVHKIDEIAMNTDSSSVNRHCSN 60
           MKK G  S+   VDR+ +WK AR N +G+Y N+ +++   KIDE+    +  S+    + 
Sbjct: 189 MKKNGHISSIEEVDRSLLWKMARQNNKGEYVNEAVKEKAEKIDELKKQVEEGSLVGEGNF 248

Query: 61  DVLTQALGTKEHNGRVRGVGGYVTSTTYFHSVKK-TSKDEANIL---------------V 120
           D+LT ALGT+EH GRVRG+G +VT +T  +  K   SK++  I+                
Sbjct: 249 DILTMALGTEEHPGRVRGLGHFVTESTDLNVSKPINSKEQLRIMKSQLQEEKDRREKAEE 308

Query: 121 ENEELRRRVSELEAQIRSNLS 124
           E  E RR+  ELE ++RS  S
Sbjct: 309 ELNEERRKREELEVELRSTQS 329

[Close]

BLAST of MELO3C023639 vs. TrEMBL
Match: A5BSR3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027409 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.5e-13
Identity = 53/141 (37.59%), Postives = 77/141 (54.61%), Query Frame = 1


Query: 1   MKKKG--SNEVYVDRAKMWKKARVNKQGQYDNDEIQQVVHKIDEIAMNTDSSSVNRHCSN 60
           MKK G  S+   VDR+ +WK AR N +G+Y N+ +++   KIDE+    +  S     + 
Sbjct: 134 MKKNGHISSIEEVDRSLLWKMARQNNKGEYVNEAVKEKAEKIDELKKQVEEGSXVGEGNF 193

Query: 61  DVLTQALGTKEHNGRVRGVGGYVTSTTYFHSVKK-TSKDEANIL---------------V 120
           D+LT ALGT+EH GRVRG+G +VT +T  +  K   SK++  I+                
Sbjct: 194 DILTMALGTEEHPGRVRGLGHFVTESTDLNVSKPINSKEQLRIMKSQLQEEKDRREKAEE 253

Query: 121 ENEELRRRVSELEAQIRSNLS 124
           E  E RR+  ELE ++RS  S
Sbjct: 254 ELNEERRKREELEVELRSTQS 274

[Close]

BLAST of MELO3C023639 vs. TrEMBL
Match: A0A151U7C0_CAJCA (Wall-associated receptor kinase-like 4 OS=Cajanus cajan GN=KK1_007920 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 4.8e-12
Identity = 43/121 (35.54%), Postives = 72/121 (59.50%), Query Frame = 1


Query: 1   MKKKGSNEVYVDRAKMWKKARVNKQGQYDNDEIQQVVHKIDEIAMNTDSSSVNRHCSNDV 60
           +KK GSN   V R ++WK ARVNK G+ +N+ +QQV  K + ++ +     +     +D+
Sbjct: 162 IKKSGSNVTSVPRQELWKNARVNKAGEIENENVQQVWDKCELLSQSIHPEDIT-DARSDI 221

Query: 61  LTQALGTKEHNGRVRGVGGYVTSTTYFHSVKKTSKDEANILV-ENEELRRRVSELEAQIR 120
           L+QAL   E+ GRVRGVG  VT   YF   K+  + E ++L+ +  ++  R++ +E ++ 
Sbjct: 222 LSQALCVPEYPGRVRGVGFGVTHKDYFPPKKRHKQQEHDLLIAQIRDMSARMARMEKEML 281

[Close]

BLAST of MELO3C023639 vs. TrEMBL
Match: M5Y0E0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026422mg PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.8e-11
Identity = 48/147 (32.65%), Postives = 77/147 (52.38%), Query Frame = 1


Query: 11  VDRAKMWKKARVNKQGQYDNDEIQQVVHKIDEIAMNTDSSSVNRHCSNDVLTQALGTKEH 70
           +DR+ +WKKAR +KQG   N ++ +    ID+        +++   SNDVLT ALGT E 
Sbjct: 188 IDRSLLWKKAREDKQGNIPNPKVAEKAKLIDDFKKKVSEGTLSISGSNDVLTLALGTPEL 247

Query: 71  NGRVRGVGGYVTSTTYFHSVKKTSKDEANILVEN--EELRRRVSELEAQIRSNLSTPLSA 130
            GRVRGVG  V+ T +F+ ++      A+ L E+  E +R    ++EA+ + N+   + A
Sbjct: 248 GGRVRGVGARVSPTQFFNLLRPQRVKFADKLKESVMEAVREEAKKMEAKAKENVLEAVRA 307

Query: 131 HESCSRPIMLEGIEEKDKRIEVESLDK 156
                R I+L+   +     +   L K
Sbjct: 308 ----EREILLKPFSQLIPNFDPNLLSK 330

[Close]

BLAST of MELO3C023639 vs. TrEMBL
Match: M5WMK0_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppb022709mg PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 5.3e-11
Identity = 47/148 (31.76%), Postives = 77/148 (52.03%), Query Frame = 1


Query: 11  VDRAKMWKKARVNKQGQYDNDEIQQVVHKIDEIAMNTDSSSVNRHCSNDVLTQALGTKEH 70
           +DR+ +WKKAR +KQG   + ++ +    ID++       ++    SND+LT ALGT EH
Sbjct: 6   IDRSLLWKKAREDKQGNILDPKVAEKAKLIDDLKKQVSEGTLTVSGSNDILTLALGTLEH 65

Query: 71  NGRVRGVGGYVTSTTYFHSVKKTSKDEANILVEN--EELRRRVSELEAQIRSNLSTPLSA 130
            GRVRGVG  V+ + +F+  ++     AN L E+  E +R     +EA+ + ++   + A
Sbjct: 66  GGRVRGVGAGVSPSQFFNLSRQQRVKFANKLKESVIEGVREETIRIEARAKKSVLEAVRA 125

Query: 131 HESCSRPIMLEGIEEKDKRIEVESLDKP 157
                R IML+   +     +   L  P
Sbjct: 126 ----KREIMLKQFSQLIPNFDPNMLKTP 149

[Close]

BLAST of MELO3C023639 vs. NCBI nr
Match: gi|659109765|ref|XP_008454865.1| (PREDICTED: trans-resveratrol di-O-methyltransferase-like [Cucumis melo])

HSP 1 Score: 116.7 bits (291), Expect = 3.9e-23
Identity = 58/73 (79.45%), Postives = 64/73 (87.67%), Query Frame = 1


Query: 45  MNTDSSSVNRHCSNDVLTQALGTKEHNGRVRGVGGYVTSTTYFHSVKKTSKDEANILVEN 104
           MNTDSSS+NR+ SNDVLTQALGTKEHNGRVRG+G YVT  TY+HSVKKTSKDE NI++E 
Sbjct: 1   MNTDSSSMNRYYSNDVLTQALGTKEHNGRVRGIGEYVTPITYYHSVKKTSKDEVNIVLEI 60

Query: 105 EELRRRVSELEAQ 118
           EELRRR   LEAQ
Sbjct: 61  EELRRRDELLEAQ 73

[Close]

BLAST of MELO3C023639 vs. NCBI nr
Match: gi|778708464|ref|XP_011656204.1| (PREDICTED: uncharacterized protein LOC105435665 [Cucumis sativus])

HSP 1 Score: 92.4 bits (228), Expect = 7.8e-16
Identity = 54/120 (45.00%), Postives = 75/120 (62.50%), Query Frame = 1


Query: 30  NDEIQQVVHKIDEIAMNTDSSSVNRHCSNDVLTQALGTKEHNGRVRGVGGYVTSTTYFHS 89
           N+++++ V+ ID+I+       V++  S + L QALGT EH+GRVRGVGG+VT T YFH+
Sbjct: 110 NEDVREFVNHIDDISR----IYVDKEPSPNDLAQALGTNEHSGRVRGVGGFVTRTAYFHT 169

Query: 90  VKKTSKDEANI---LVENEELRRRVSELEAQIRSNLSTPLSAHESCSRPIMLEGIEEKDK 147
            K + K   NI     ENE+L   V ELE+   +  STP  AH SCSRP +   I+ K+K
Sbjct: 170 SKHSKKQSENIEKLREENEKLCLGVQELESIHLTTQSTPTYAHASCSRPRLEYDIQPKEK 225

[Close]

BLAST of MELO3C023639 vs. NCBI nr
Match: gi|359495081|ref|XP_002269174.2| (PREDICTED: uncharacterized protein LOC100263584 [Vitis vinifera])

HSP 1 Score: 84.3 bits (207), Expect = 2.1e-13
Identity = 53/141 (37.59%), Postives = 78/141 (55.32%), Query Frame = 1


Query: 1   MKKKG--SNEVYVDRAKMWKKARVNKQGQYDNDEIQQVVHKIDEIAMNTDSSSVNRHCSN 60
           MKK G  S+   VDR+ +WK AR N +G+Y N+ +++   KIDE+    +  S+    + 
Sbjct: 189 MKKNGHISSIEEVDRSLLWKMARQNNKGEYVNEAVKEKAEKIDELKKQVEEGSLVGEGNF 248

Query: 61  DVLTQALGTKEHNGRVRGVGGYVTSTTYFHSVKK-TSKDEANIL---------------V 120
           D+LT ALGT+EH GRVRG+G +VT +T  +  K   SK++  I+                
Sbjct: 249 DILTMALGTEEHPGRVRGLGHFVTESTDLNVSKPINSKEQLRIMKSQLQEEKDRREKAEE 308

Query: 121 ENEELRRRVSELEAQIRSNLS 124
           E  E RR+  ELE ++RS  S
Sbjct: 309 ELNEERRKREELEVELRSTQS 329

[Close]

BLAST of MELO3C023639 vs. NCBI nr
Match: gi|147859391|emb|CAN83553.1| (hypothetical protein VITISV_027409 [Vitis vinifera])

HSP 1 Score: 83.6 bits (205), Expect = 3.6e-13
Identity = 53/141 (37.59%), Postives = 77/141 (54.61%), Query Frame = 1


Query: 1   MKKKG--SNEVYVDRAKMWKKARVNKQGQYDNDEIQQVVHKIDEIAMNTDSSSVNRHCSN 60
           MKK G  S+   VDR+ +WK AR N +G+Y N+ +++   KIDE+    +  S     + 
Sbjct: 134 MKKNGHISSIEEVDRSLLWKMARQNNKGEYVNEAVKEKAEKIDELKKQVEEGSXVGEGNF 193

Query: 61  DVLTQALGTKEHNGRVRGVGGYVTSTTYFHSVKK-TSKDEANIL---------------V 120
           D+LT ALGT+EH GRVRG+G +VT +T  +  K   SK++  I+                
Sbjct: 194 DILTMALGTEEHPGRVRGLGHFVTESTDLNVSKPINSKEQLRIMKSQLQEEKDRREKAEE 253

Query: 121 ENEELRRRVSELEAQIRSNLS 124
           E  E RR+  ELE ++RS  S
Sbjct: 254 ELNEERRKREELEVELRSTQS 274

[Close]

BLAST of MELO3C023639 vs. NCBI nr
Match: gi|731439612|ref|XP_010647543.1| (PREDICTED: uncharacterized protein LOC104878643 [Vitis vinifera])

HSP 1 Score: 83.6 bits (205), Expect = 3.6e-13
Identity = 61/174 (35.06%), Postives = 97/174 (55.75%), Query Frame = 1


Query: 1   MKKKGSNEVYVDRAKMWKKARVNKQGQYDNDEIQQVVHKIDEIAMNTDSSSVNRHCSNDV 60
           M + GS E  +DR+ +WK+A   K G YD D +  VV KIDE+   +  S ++   SND+
Sbjct: 273 MIEAGSTES-IDRSLLWKRAMQKKDGSYD-DVVLPVVEKIDELMKESQESGISYSGSNDI 332

Query: 61  LTQALGTKEHNGRVRGVGGYVTSTTYFHSVKKTSKDEANILVENEELRRRVSELEAQIRS 120
           L+QALGT E+ GRVR  G + T   YF+S+  + +   +IL   +E   R ++ EA + +
Sbjct: 333 LSQALGTPEYTGRVRAKGKHYTPGRYFNSM--SERVVRDILKATQE---RQAKFEADVLA 392

Query: 121 NLS-----TP---LSAHESCSRPIML-EGIEEKDKRIEVESLDKPKEKEKKGRR 166
            LS     TP   +S+    S+ ++L E +E+  +++E E+L    E   K R+
Sbjct: 393 RLSQIGVATPQSDVSSSNMKSKLLLLPEVVEKPIRKVEEETLPVKIEPHMKARK 439

The following BLAST results are available for this feature:

BLAST of MELO3C023639 vs. TrEMBL


Match Name	E-value	Identity	Description
D7SQ25_VITVI	1.5e-13	37.59	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g01850 PE=4 SV=...	[more]
A5BSR3_VITVI	2.5e-13	37.59	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027409 PE=4 SV=1	[more]
A0A151U7C0_CAJCA	4.8e-12	35.54	Wall-associated receptor kinase-like 4 OS=Cajanus cajan GN=KK1_007920 PE=4 SV=1	[more]
M5Y0E0_PRUPE	1.8e-11	32.65	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026422mg PE=4 SV=1	[more]
M5WMK0_PRUPE	5.3e-11	31.76	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppb022709mg PE=4 S...	[more]

BLAST of MELO3C023639 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659109765\|ref\|XP_008454865.1\|	3.9e-23	79.45	PREDICTED: trans-resveratrol di-O-methyltransferase-like [Cucumis melo]	[more]
gi\|778708464\|ref\|XP_011656204.1\|	7.8e-16	45.00	PREDICTED: uncharacterized protein LOC105435665 [Cucumis sativus]	[more]
gi\|359495081\|ref\|XP_002269174.2\|	2.1e-13	37.59	PREDICTED: uncharacterized protein LOC100263584 [Vitis vinifera]	[more]
gi\|147859391\|emb\|CAN83553.1\|	3.6e-13	37.59	hypothetical protein VITISV_027409 [Vitis vinifera]	[more]
gi\|731439612\|ref\|XP_010647543.1\|	3.6e-13	35.06	PREDICTED: uncharacterized protein LOC104878643 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004252	Probable_transposase_24

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C023639T1	MELO3C023639T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004252	Probable transposase, Ptta/En/Spm, plant	PFAM	PF03004	Transposase_24	coord: 8..83 score: 1.
None	No IPR available	unknown	Coil	Coil	coord: 97..124 scor

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C023639	Wax gourd	mewgoB258
MELO3C023639	Cucumber (Gy14) v1	cgymeB085
MELO3C023639	Cucurbita maxima (Rimu)	cmameB019
MELO3C023639	Cucurbita maxima (Rimu)	cmameB396
MELO3C023639	Cucurbita moschata (Rifu)	cmomeB008
MELO3C023639	Cucurbita moschata (Rifu)	cmomeB387
MELO3C023639	Wild cucumber (PI 183967)	cpimeB528
MELO3C023639	Watermelon (Charleston Gray)	mewcgB181
MELO3C023639	Watermelon (97103) v1	mewmB204
MELO3C023639	Cucurbita pepo (Zucchini)	cpemeB505
MELO3C023639	Cucurbita pepo (Zucchini)	cpemeB714
MELO3C023639	Bottle gourd (USVL1VR-Ls)	lsimeB189
MELO3C023639	Cucumber (Gy14) v2	cgybmeB460
MELO3C023639	Cucumber (Chinese Long) v3	cucmeB540
MELO3C023639	Watermelon (97103) v2	mewmbB230