MELO3C023467 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C023467
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionRALF-LIKE 8 family protein
Locationchr1 : 33003427 .. 33003874 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACCATTCATTCAAACTAAAATTTAAAGAATTGAAAGGTTAATATCCAAAAAAATCAAAATGGCAAGCAACACCAACAAGATACTTGCTATTTTGATAGCTATGATCATGGTTTGTTCGTTAATGGTAAGCCCAACAAACGCAAACCCCTCTCTTAGCTATGGTGCCATCGGTAAGGATGAAGACGCAAAATGCAGTGATGGTCACTGTAAAACATTAGGAGATCCAGCCAATGGTTATAACAGAGGATGTGAGCCTGAAAACGACTGTAGATCATAACTATCTTGTTCTAAATGATTCACAGTGCATATCCTATCTATTTTTTAATTATGACTATGTTGTAAAACAAGTGTCATTCACTCATATGGTATTGACCTGACATTTCTTTTATTTTAATTTATTACATTTATTAATCAATGGTCTAAGTTATATGTTGTATTTGTTATATCT

mRNA sequence

ACCATTCATTCAAACTAAAATTTAAAGAATTGAAAGGTTAATATCCAAAAAAATCAAAATGGCAAGCAACACCAACAAGATACTTGCTATTTTGATAGCTATGATCATGGTTTGTTCGTTAATGGTAAGCCCAACAAACGCAAACCCCTCTCTTAGCTATGGTGCCATCGGTAAGGATGAAGACGCAAAATGCAGTGATGGTCACTGTAAAACATTAGGAGATCCAGCCAATGGTTATAACAGAGGATGTGAGCCTGAAAACGACTGTAGATCATAACTATCTTGTTCTAAATGATTCACAGTGCATATCCTATCTATTTTTTAATTATGACTATGTTGTAAAACAAGTGTCATTCACTCATATGGTATTGACCTGACATTTCTTTTATTTTAATTTATTACATTTATTAATCAATGGTCTAAGTTATATGTTGTATTTGTTATATCT

Coding sequence (CDS)

ATGGCAAGCAACACCAACAAGATACTTGCTATTTTGATAGCTATGATCATGGTTTGTTCGTTAATGGTAAGCCCAACAAACGCAAACCCCTCTCTTAGCTATGGTGCCATCGGTAAGGATGAAGACGCAAAATGCAGTGATGGTCACTGTAAAACATTAGGAGATCCAGCCAATGGTTATAACAGAGGATGTGAGCCTGAAAACGACTGTAGATCATAA

Protein sequence

MASNTNKILAILIAMIMVCSLMVSPTNANPSLSYGAIGKDEDAKCSDGHCKTLGDPANGYNRGCEPENDCRS*
Homology
[Close]
BLAST of MELO3C023467 vs. TrEMBL
Match: A0A0A0KLD0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G054060 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 6.7e-19
Identity = 52/73 (71.23%), Postives = 57/73 (78.08%), Query Frame = 1 

Query: 1  MASNTNKILAI-LIAMIMVCSLMVSPTNANPSLSYGAIGKDEDAKCSDGHCKTLGDPANG 60
          MA NTNK LAI ++AMIMVCSLM +PTNA  SL YGAIGK  DA+C DG C+ LGDPAN 
Sbjct: 1  MAGNTNKTLAIVMVAMIMVCSLMENPTNAT-SLDYGAIGKG-DARCKDGKCEILGDPANN 60

Query: 61 YNRGCEPENDCRS 73
          Y RGCEPE  CRS
Sbjct: 61 YTRGCEPEEHCRS 71

[Close]
BLAST of MELO3C023467 vs. TrEMBL
Match: A0A0A0KJT5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G511800 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 2.2e-17
Identity = 50/73 (68.49%), Postives = 54/73 (73.97%), Query Frame = 1 

Query: 1  MASNTNKILAIL-IAMIMVCSLMVSPTNANPSLSYGAIGKDEDAKCSDGHCKTLGDPANG 60
          MA NTNK L IL IAMIM CSL+ +PTNA  SL YG IGK  DA+C DG C+ LGDPAN 
Sbjct: 1  MAGNTNKTLVILMIAMIMACSLIENPTNAT-SLGYGVIGKG-DARCKDGKCEILGDPANN 60

Query: 61 YNRGCEPENDCRS 73
          Y RGCEPE  CRS
Sbjct: 61 YTRGCEPEEHCRS 71

[Close]
BLAST of MELO3C023467 vs. NCBI nr
Match: gi|700194487|gb|KGN49664.1| (hypothetical protein Csa_5G054060 [Cucumis sativus])

HSP 1 Score: 100.9 bits (250), Expect = 9.7e-19
Identity = 52/73 (71.23%), Postives = 57/73 (78.08%), Query Frame = 1 

Query: 1  MASNTNKILAI-LIAMIMVCSLMVSPTNANPSLSYGAIGKDEDAKCSDGHCKTLGDPANG 60
          MA NTNK LAI ++AMIMVCSLM +PTNA  SL YGAIGK  DA+C DG C+ LGDPAN 
Sbjct: 1  MAGNTNKTLAIVMVAMIMVCSLMENPTNAT-SLDYGAIGKG-DARCKDGKCEILGDPANN 60

Query: 61 YNRGCEPENDCRS 73
          Y RGCEPE  CRS
Sbjct: 61 YTRGCEPEEHCRS 71

[Close]
BLAST of MELO3C023467 vs. NCBI nr
Match: gi|700193860|gb|KGN49064.1| (hypothetical protein Csa_6G511800 [Cucumis sativus])

HSP 1 Score: 95.9 bits (237), Expect = 3.1e-17
Identity = 50/73 (68.49%), Postives = 54/73 (73.97%), Query Frame = 1 

Query: 1  MASNTNKILAIL-IAMIMVCSLMVSPTNANPSLSYGAIGKDEDAKCSDGHCKTLGDPANG 60
          MA NTNK L IL IAMIM CSL+ +PTNA  SL YG IGK  DA+C DG C+ LGDPAN 
Sbjct: 1  MAGNTNKTLVILMIAMIMACSLIENPTNAT-SLGYGVIGKG-DARCKDGKCEILGDPANN 60

Query: 61 YNRGCEPENDCRS 73
          Y RGCEPE  CRS
Sbjct: 61 YTRGCEPEEHCRS 71

The following BLAST results are available for this feature:
BLAST of MELO3C023467 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KLD0_CUCSA6.7e-1971.23Uncharacterized protein OS=Cucumis sativus GN=Csa_5G054060 PE=4 SV=1[more]
A0A0A0KJT5_CUCSA2.2e-1768.49Uncharacterized protein OS=Cucumis sativus GN=Csa_6G511800 PE=4 SV=1[more]
BLAST of MELO3C023467 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700194487|gb|KGN49664.1|9.7e-1971.23hypothetical protein Csa_5G054060 [Cucumis sativus][more]
gi|700193860|gb|KGN49064.1|3.1e-1768.49hypothetical protein Csa_6G511800 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C023467T1MELO3C023467T1mRNA