MELO3C023191 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C023191
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	DNA-binding protein BIN4
Location	chr11 : 52075 .. 60302 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTACTTGATCAGATAGAATCTATCATGAACGATTTCATTCAGTTGAAGGCACTGTCCAAAGTTGATGAGGCTGAAACTATGGTTGAAGGTGAGTTGCTTTCAATTTCTCTGAATTGTTCAAAGTTGCCTGTTTCTGTGCTCATTCTATGTTTTGCATCTGTAGGAACATTAGATGGCTTCTCGTTTGATTCTGAAGACGAGGCTGAGAAAATAACTAAGGTTGCTTCTTCTCCGGCTGATCAAAATGAGCCGGTAGAAGGGCTCAACACAAAATCCAAAAACAAAGCCGAGAAATCATCAGTATGTTTCTACATTCAATTGCGTGTAGTATCTTAATGATCCATCTTTCGTTCATGCTTATGCTCTGGAAATGTCATTGTAGGGGCGGAAGCGTGTTAAATCTGGAGGAAGGCTGCAGGCTCCGAAGAAAACAAGAAAGAAAGTTCAAGGTTCTAAAACTAAAAATGCAAAAAGCAAGAAATGA

mRNA sequence

ATGTTACTTGATCAGATAGAATCTATCATGAACGATTTCATTCAGTTGAAGGCACTGTCCAAAGTTGATGAGGCTGAAACTATGGTTGAAGGAACATTAGATGGCTTCTCGTTTGATTCTGAAGACGAGGCTGAGAAAATAACTAAGGTTGCTTCTTCTCCGGCTGATCAAAATGAGCCGGTAGAAGGGCTCAACACAAAATCCAAAAACAAAGCCGAGAAATCATCAGGGCGGAAGCGTGTTAAATCTGGAGGAAGGCTGCAGGCTCCGAAGAAAACAAGAAAGAAAGTTCAAGGTTCTAAAACTAAAAATGCAAAAAGCAAGAAATGA

Coding sequence (CDS)

ATGTTACTTGATCAGATAGAATCTATCATGAACGATTTCATTCAGTTGAAGGCACTGTCCAAAGTTGATGAGGCTGAAACTATGGTTGAAGGAACATTAGATGGCTTCTCGTTTGATTCTGAAGACGAGGCTGAGAAAATAACTAAGGTTGCTTCTTCTCCGGCTGATCAAAATGAGCCGGTAGAAGGGCTCAACACAAAATCCAAAAACAAAGCCGAGAAATCATCAGGGCGGAAGCGTGTTAAATCTGGAGGAAGGCTGCAGGCTCCGAAGAAAACAAGAAAGAAAGTTCAAGGTTCTAAAACTAAAAATGCAAAAAGCAAGAAATGA

Protein sequence

MLLDQIESIMNDFIQLKALSKVDEAETMVEGTLDGFSFDSEDEAEKITKVASSPADQNEPVEGLNTKSKNKAEKSSGRKRVKSGGRLQAPKKTRKKVQGSKTKNAKSKK*

Homology

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BLAST of MELO3C023191 vs. Swiss-Prot
Match: BIN4_ARATH (DNA-binding protein BIN4 OS=Arabidopsis thaliana GN=BIN4 PE=1 SV=2)

HSP 1 Score: 213.0 bits (541), Expect = 5.3e-54
Identity = 145/364 (39.84%), Postives = 201/364 (55.22%), Query Frame = 1


Query: 22  DQIQGDCGNHNLAKEGKLDRRTGHENSEHSVWMLSSDSESCS------------DNNFIK 81
           D   G    +N+  E    +    +    SVW++SSDSE  S            D +F+ 
Sbjct: 100 DSCAGKENGNNVDCEKLSSKHKDAQGGADSVWLVSSDSEPSSPIKQEVTVSTEKDADFVL 159

Query: 82  EDCNHH--------EELSELATSEIQGRRKDENAGRRF--TEGKSKSRKVSKEMSPKKKI 141
           E             E+  +  +   +   K+ N+ +    TE K     ++++++P+K  
Sbjct: 160 EATEEEPAVKTVRKEKSPKTKSKSSRKTPKEGNSAQEILKTEDKDTDTTIAEQVTPEKSP 219

Query: 142 KSQVCTSAKEKIINSDTNKGGLTLEGSEGFVRNGEEEILEKDALDDCIVPPVS--SSRLP 201
           K++  +S K      + N     L+  +       + I+ ++   D  + P S  SSRLP
Sbjct: 220 KTKSKSSRKTP---KEENCAQEILKTEDKDKDTDTDTIIAEEVTTDQKIKPSSGSSSRLP 279

Query: 202 LVLSDKVHRLKALVECEGTSIDLSGDMGAVGRVVVSDSSSAKNELCLDLKGTLYRAVIVP 261
           LVLS+KV+R K LVECEG SIDLSGDMGAVGRVVVSD++    ++ LDLKGT+Y++ I+P
Sbjct: 280 LVLSEKVNRTKVLVECEGDSIDLSGDMGAVGRVVVSDTTG---DMYLDLKGTIYKSTIIP 339

Query: 262 SRTFCIVSFGQSEAKIESIMNDFIQLKALSKVDEAETMVEGTLDGFSFDSEDEAEKITKV 321
           SRTFC+V+ GQ+EAKIE+IMNDFIQL   S V EAETMVEGTL+GF+F+S+DE+ K  K 
Sbjct: 340 SRTFCVVNVGQTEAKIEAIMNDFIQLIPQSNVYEAETMVEGTLEGFTFESDDESNKNAKT 399

Query: 322 ASSPADQNEPV-EGLNTKSKNKA----EKSSGRKRVKSGGRLQAPKKTRKKVQGSKTKNA 357
           A  PADQ+    E  NTK+K KA    E   G+KR +     Q P    KK + S  K  
Sbjct: 400 AVKPADQSVGTEEETNTKAKPKAKAKGETVIGKKRGRPSKEKQPP---AKKARNSAPKKP 454

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BLAST of MELO3C023191 vs. TrEMBL
Match: A0A0A0LJZ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G338790 PE=4 SV=1)

HSP 1 Score: 632.1 bits (1629), Expect = 4.1e-178
Identity = 321/346 (92.77%), Postives = 333/346 (96.24%), Query Frame = 1


Query: 1   MDNAIDQRDPSSHKTTQDLDGDQIQGDCGNHNLAKEGKLDRRTGHENSEHSVWMLSSDSE 60
           MDNAIDQRDPSSHKTTQDLDGDQIQGDCGNHNLAKE KLDR TGHENS+HSVWMLS DSE
Sbjct: 26  MDNAIDQRDPSSHKTTQDLDGDQIQGDCGNHNLAKEVKLDRHTGHENSKHSVWMLSLDSE 85

Query: 61  SCSDNNFIKEDCNHHEELSELATSEIQGRRKDENAGRRFTEGKSKSRKVSKEMSPKKKIK 120
           SCSDNNFIKED ++HEEL+ELATSEIQGRRKDENAGRRFTEGKSKSRKVS EMSPKKK+K
Sbjct: 86  SCSDNNFIKEDYSYHEELAELATSEIQGRRKDENAGRRFTEGKSKSRKVSNEMSPKKKVK 145

Query: 121 SQVCTSAKEKIINSDTNKGGLTLEGSEGFVRNGEEEILEKDALDDCIVPPVSSSRLPLVL 180
           S+VCTSAKE I+NS TNKGG T+EGSEG VRNG+ EILEKDALDDCI PPVSSSRLPLVL
Sbjct: 146 SEVCTSAKENIMNSGTNKGGSTMEGSEGHVRNGDVEILEKDALDDCIGPPVSSSRLPLVL 205

Query: 181 SDKVHRLKALVECEGTSIDLSGDMGAVGRVVVSDSSSAKNELCLDLKGTLYRAVIVPSRT 240
           SDK HRLKALVECEGTSIDLSGDMGAVGRVVVSDSSSAKNELCLDLKGTLYRAVIVPSRT
Sbjct: 206 SDKAHRLKALVECEGTSIDLSGDMGAVGRVVVSDSSSAKNELCLDLKGTLYRAVIVPSRT 265

Query: 241 FCIVSFGQSEAKIESIMNDFIQLKALSKVDEAETMVEGTLDGFSFDSEDEAEKITKVASS 300
           FCIVSFGQSEAKIESIMNDFIQLKALSKVDEAETMVEGTLDGFSFDSED+AEKITK A+S
Sbjct: 266 FCIVSFGQSEAKIESIMNDFIQLKALSKVDEAETMVEGTLDGFSFDSEDDAEKITK-AAS 325

Query: 301 PADQNEPVEGLNTKSKNKAEKSSGRKRVKSGGRLQAPKKTRKKVQG 347
           PADQNEPVEGLNTKSKNKAEKSSGRKRVK+GGRLQAPKKTRKKVQG
Sbjct: 326 PADQNEPVEGLNTKSKNKAEKSSGRKRVKTGGRLQAPKKTRKKVQG 370

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BLAST of MELO3C023191 vs. TrEMBL
Match: F6H7A6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0098g00630 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 3.5e-76
Identity = 177/348 (50.86%), Postives = 222/348 (63.79%), Query Frame = 1


Query: 9   DPSSHKTTQDLDGDQIQGDCGNHNLAKEGKLDRRTGHENSEHSVWMLSSDSESCSDNNFI 68
           DP S K  +  +  + +G+ G    + E   D      N  HSVW LSSDSESC DN+ +
Sbjct: 93  DPKSTKKQKVNNHKKKEGNEGRKKASVEKPSDGEPNAPN--HSVWKLSSDSESCPDNSSM 152

Query: 69  KEDCNHHEELSELATSEIQGRRKDENAGRRFTEGKSKSRKVSKEMSPKKKIKSQVCTSAK 128
           +ED  HHEE S   T++   + KD        E  S   + SKE SPKK++K +   S+K
Sbjct: 153 REDYIHHEESSVHKTTQFPDKEKDAVLSENGQE--SLLNEASKEKSPKKRVKVEDHISSK 212

Query: 129 EKIINSDTNKGGLTLEGSEGFVRNGEEEILEKDALDDCIVPPVSSSRLPLVLSDKVHRLK 188
           +K  NSD    G           +   E+LE++A D    P VSS  LPLVLS+KVHR K
Sbjct: 213 KKKANSDMKGKG----------HDDGTELLEEEASDKHTEPQVSSG-LPLVLSEKVHRSK 272

Query: 189 ALVECEGTSIDLSGDMGAVGRVVVSDSSSAKNELCLDLKGTLYRAVIVPSRTFCIVSFGQ 248
           ALVECEG SIDLSGDMGAVGR+V+ D+ S  +E+ LDLKGT+Y+  IVPSRTFCIVSFGQ
Sbjct: 273 ALVECEGESIDLSGDMGAVGRIVILDTPSRNHEMFLDLKGTIYKTTIVPSRTFCIVSFGQ 332

Query: 249 SEAKIESIMNDFIQLKALSKVDEAETMVEGTLDGFSFDSEDEAEKITKVASSPADQNE-P 308
           SEAK+E++MNDFIQLK  S V EAETMVEG L+GFSFDS+DEA+K+ K ++   DQNE  
Sbjct: 333 SEAKVEAVMNDFIQLKPQSNVYEAETMVEGILEGFSFDSDDEADKMPKASTRQTDQNEGD 392

Query: 309 VEGLNTKSKNKAEKSSG--RKRVKSGGRLQAPKKTRKKVQGSKTKNAK 354
            E  N K+K KAEK+SG  RK+ K+ G ++ PKK RKK Q  K    K
Sbjct: 393 EEQTNGKTKGKAEKASGVVRKKGKTAG-VKPPKKVRKKAQVQKRTKTK 424

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BLAST of MELO3C023191 vs. TrEMBL
Match: G7J9P4_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_3g093330 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 6.3e-70
Identity = 170/356 (47.75%), Postives = 221/356 (62.08%), Query Frame = 1


Query: 6   DQRDPSSHK--TTQDLDGDQIQGDCGNHNLAKEGKLDRRTGHENSEHSVWMLSSDSESCS 65
           D+  P+  K  T +D +G + +       +  +   D+   H+ S HS+W LSSDSESC 
Sbjct: 84  DEAPPTRKKLYTRKDKNGKKEE-----KKIKLDSDTDKEAEHKESIHSMWELSSDSESCR 143

Query: 66  DNNFIKEDCNHHEELSELATSEIQGRRKDENAGRRFTEGKSKSRKVSKEMSPKKKIKSQV 125
           D++   ED     ++ ++ T     +   E+   R  +GKS S+K SK  + +K+   + 
Sbjct: 144 DHSPKTED-----QIDQVETKPQTSQPPGEDGLLRDNDGKSPSKKASKAKASQKQTDLED 203

Query: 126 CTSAKEKIINSDTNKGGLTLEGSEGFVRNGEEEILEKDALDDCIVPPVSSSRLPLVLSDK 185
           CT  K K   +  N  G   +G +G V   +EE  EK      + P VSSS LPL+LS+K
Sbjct: 204 CTPVKGK--KTKVNAKG---KGGDGDVEVKDEETFEKP-----VEPNVSSSILPLMLSEK 263

Query: 186 VHRLKALVECEGTSIDLSGDMGAVGRVVVSDSSSAKNELCLDLKGTLYRAVIVPSRTFCI 245
           VHR KALVEC+G SIDLSGDMGAVGRV++SDS S   E+CLDLKGT+Y+  I+PSRTFC+
Sbjct: 264 VHRTKALVECQGDSIDLSGDMGAVGRVIISDSPSGDQEMCLDLKGTIYKTSIIPSRTFCV 323

Query: 246 VSFGQSEAKIESIMNDFIQLKALSKVDEAETMVEGTLDGFSFDSEDEAEKITKVASSPAD 305
           VSFGQ+EAKIE+IMNDFIQL   S V EAETMVEGTLDGFSFDS++E  K  K  + P+D
Sbjct: 324 VSFGQTEAKIEAIMNDFIQLNPPSDVYEAETMVEGTLDGFSFDSDEEDGKRQK-TTHPSD 383

Query: 306 QNEPVEGLNT-KSKNKAEKSSG--RKRVKSGGRLQAPKKTRKKVQGSKTKNAKSKK 357
           QNE  E     KSK KA+K+SG  +KR K+ G    PK  +KK   S  K AK KK
Sbjct: 384 QNEHAEEQTPGKSKRKADKTSGAEKKRGKNTGGKSQPKTAKKKAPSS--KRAKPKK 416

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BLAST of MELO3C023191 vs. TrEMBL
Match: A0A0D2RYE2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G126300 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 4.1e-69
Identity = 172/355 (48.45%), Postives = 217/355 (61.13%), Query Frame = 1


Query: 7   QRDPSSHKTT---QDLDGDQIQGDCGNHNLAKEGKLDRRTGHENSEHSVWMLSSDSESCS 66
           ++ PS  K     +D +G +  G      +A E   ++  G   + H +W LSSDSES  
Sbjct: 59  KQKPSGKKKNDAFKDSEGSEEDG-----KVAMEEMSEKHLGSHAANHLIWTLSSDSESFP 118

Query: 67  DNN-FIKEDCNHHEELSELATSEIQGRRKDENAGRRFTEGKSKSRKVSKEMSPKKKIKSQ 126
            ++   KE  +  EE  E +   + GR             +S  +K SK  SPKK +K++
Sbjct: 119 GHSPQRKEKVSLSEESGEASDPVLTGRAN-----------RSPLKKTSKGKSPKKGVKAR 178

Query: 127 VCTSAKEKIINSDTNKGGLTLEGSEGFVRNGEEEILEKDALDDCIVPPVSSSRLPLVLSD 186
             T  KEK +  D       +  ++  V   EE      A +  I P VS+SRLPLVLS+
Sbjct: 179 GQTPKKEKNVKDDAK-----ITENDVNVETAEE------AFEKHIEPHVSTSRLPLVLSE 238

Query: 187 KVHRLKALVECEGTSIDLSGDMGAVGRVVVSDSSSAKNELCLDLKGTLYRAVIVPSRTFC 246
           KVHR KALVECEG SIDLSGDMGAVGR+VVS S+S  +E+ LDLKGT+Y+  IVP RTFC
Sbjct: 239 KVHRSKALVECEGDSIDLSGDMGAVGRIVVSGSASENHEMFLDLKGTIYKTTIVPCRTFC 298

Query: 247 IVSFGQSEAKIESIMNDFIQLKALSKVDEAETMVEGTLDGFSFDSEDEAEKITKVASSPA 306
           IVSFGQ+EAKIE+IMNDFIQLK  S V EAETMVEGTL+GFSFDSEDEAEK+ K      
Sbjct: 299 IVSFGQTEAKIEAIMNDFIQLKPQSNVYEAETMVEGTLEGFSFDSEDEAEKMPKAIPHQT 358

Query: 307 DQNEPVEG-LNTKSKNKAEKSS--GRKRVKS-GGRLQAPKKTRKKVQGSKTKNAK 354
           DQNE ++G +N KSK +A+K+S   RKR K+ GG+ Q  KK RKK    K K  K
Sbjct: 359 DQNEDIDGQMNGKSKGRADKTSMVSRKRGKTGGGKSQPAKKARKKAISKKPKAKK 386

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BLAST of MELO3C023191 vs. TrEMBL
Match: K7KUX9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G139100 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 1.2e-68
Identity = 167/355 (47.04%), Postives = 221/355 (62.25%), Query Frame = 1


Query: 5   IDQRDPSSHKTTQDLDGDQIQGDCGNHNLAKEGKLDRRTGHENSEHSVWMLSSDSESCSD 64
           ++++ PS  K    LD  + +G+        E  +D+   H+ S HS+W LSSDSES  D
Sbjct: 73  VEEQTPSKRKK---LDKKKAKGNKEEKEAVNESNIDKHIDHKESIHSIWTLSSDSESFHD 132

Query: 65  NNFIKEDCNHHEELSELATSEIQGRRKDENAGRRFTEGKSKSRKVSKEMSPKKKIKSQVC 124
           ++  ++    H +  E +  EI    +  +      +GK  S+K SKE S +K+I  +  
Sbjct: 133 HSPKRD----HIDQVETSQHEISDEGECGDGLVFGNDGKFPSKKGSKEKSSQKQIHVEGH 192

Query: 125 TSAKEKIINSDTNKGGLTLEGSEGFVRNGEEEILEKDALDDCIVPPVSSSRLPLVLSDKV 184
           T  K K I +     G       G ++  EEE  EK A      P VSS+RLPL+LS+KV
Sbjct: 193 TPVKGKEIKASAKGKG------SGDLKVEEEETCEKPA-----EPNVSSARLPLMLSEKV 252

Query: 185 HRLKALVECEGTSIDLSGDMGAVGRVVVSDSSSAKNELCLDLKGTLYRAVIVPSRTFCIV 244
            R KAL+EC+G SIDLSGDMGAVGR+++SDS S   E+CLDLKGT+Y+  IVP RTFC+V
Sbjct: 253 QRTKALIECQGDSIDLSGDMGAVGRIIISDSPSGDQEMCLDLKGTIYKTSIVPCRTFCVV 312

Query: 245 SFGQSEAKIESIMNDFIQLKALSKVDEAETMVEGTLDGFSFDSEDEAEKITKVASSPADQ 304
           SFGQSEAK+E+IMNDFIQLK  S + EAETMVEGTLDGF FDS++EA K+ K +++  DQ
Sbjct: 313 SFGQSEAKVEAIMNDFIQLKPQSNLYEAETMVEGTLDGFFFDSDEEAGKMQK-STNQTDQ 372

Query: 305 NEPV-EGLNTKSKNKAEKSS--GRKRVKSGGRLQAPKKTRKKVQGSKTKNAKSKK 357
           NE V E  N KSK K +K+S  G+KR +S G     K  +KK  GS  K AK+KK
Sbjct: 373 NENVEEQANGKSKGKTDKTSGAGKKRGRSTGGKPQAKIAKKKTPGS--KKAKTKK 406

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BLAST of MELO3C023191 vs. TAIR10
Match: AT5G24630.6 (AT5G24630.6 double-stranded DNA binding)

HSP 1 Score: 213.0 bits (541), Expect = 3.0e-55
Identity = 145/364 (39.84%), Postives = 201/364 (55.22%), Query Frame = 1


Query: 22  DQIQGDCGNHNLAKEGKLDRRTGHENSEHSVWMLSSDSESCS------------DNNFIK 81
           D   G    +N+  E    +    +    SVW++SSDSE  S            D +F+ 
Sbjct: 100 DSCAGKENGNNVDCEKLSSKHKDAQGGADSVWLVSSDSEPSSPIKQEVTVSTEKDADFVL 159

Query: 82  EDCNHH--------EELSELATSEIQGRRKDENAGRRF--TEGKSKSRKVSKEMSPKKKI 141
           E             E+  +  +   +   K+ N+ +    TE K     ++++++P+K  
Sbjct: 160 EATEEEPAVKTVRKEKSPKTKSKSSRKTPKEGNSAQEILKTEDKDTDTTIAEQVTPEKSP 219

Query: 142 KSQVCTSAKEKIINSDTNKGGLTLEGSEGFVRNGEEEILEKDALDDCIVPPVS--SSRLP 201
           K++  +S K      + N     L+  +       + I+ ++   D  + P S  SSRLP
Sbjct: 220 KTKSKSSRKTP---KEENCAQEILKTEDKDKDTDTDTIIAEEVTTDQKIKPSSGSSSRLP 279

Query: 202 LVLSDKVHRLKALVECEGTSIDLSGDMGAVGRVVVSDSSSAKNELCLDLKGTLYRAVIVP 261
           LVLS+KV+R K LVECEG SIDLSGDMGAVGRVVVSD++    ++ LDLKGT+Y++ I+P
Sbjct: 280 LVLSEKVNRTKVLVECEGDSIDLSGDMGAVGRVVVSDTTG---DMYLDLKGTIYKSTIIP 339

Query: 262 SRTFCIVSFGQSEAKIESIMNDFIQLKALSKVDEAETMVEGTLDGFSFDSEDEAEKITKV 321
           SRTFC+V+ GQ+EAKIE+IMNDFIQL   S V EAETMVEGTL+GF+F+S+DE+ K  K 
Sbjct: 340 SRTFCVVNVGQTEAKIEAIMNDFIQLIPQSNVYEAETMVEGTLEGFTFESDDESNKNAKT 399

Query: 322 ASSPADQNEPV-EGLNTKSKNKA----EKSSGRKRVKSGGRLQAPKKTRKKVQGSKTKNA 357
           A  PADQ+    E  NTK+K KA    E   G+KR +     Q P    KK + S  K  
Sbjct: 400 AVKPADQSVGTEEETNTKAKPKAKAKGETVIGKKRGRPSKEKQPP---AKKARNSAPKKP 454

[Close]

BLAST of MELO3C023191 vs. NCBI nr
Match: gi|659121791|ref|XP_008460815.1| (PREDICTED: DNA-binding protein BIN4 isoform X2 [Cucumis melo])

HSP 1 Score: 702.2 bits (1811), Expect = 4.6e-199
Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = 1


Query: 1   MDNAIDQRDPSSHKTTQDLDGDQIQGDCGNHNLAKEGKLDRRTGHENSEHSVWMLSSDSE 60
           MDNAIDQRDPSSHKTTQDLDGDQIQGDCGNHNLAKEGKLDRRTGHENSEHSVWMLSSDSE
Sbjct: 37  MDNAIDQRDPSSHKTTQDLDGDQIQGDCGNHNLAKEGKLDRRTGHENSEHSVWMLSSDSE 96

Query: 61  SCSDNNFIKEDCNHHEELSELATSEIQGRRKDENAGRRFTEGKSKSRKVSKEMSPKKKIK 120
           SCSDNNFIKEDCNHHEELSELATSEIQGRRKDENAGRRFTEGKSKSRKVSKEMSPKKKIK
Sbjct: 97  SCSDNNFIKEDCNHHEELSELATSEIQGRRKDENAGRRFTEGKSKSRKVSKEMSPKKKIK 156

Query: 121 SQVCTSAKEKIINSDTNKGGLTLEGSEGFVRNGEEEILEKDALDDCIVPPVSSSRLPLVL 180
           SQVCTSAKEKIINSDTNKGGLTLEGSEGFVRNGEEEILEKDALDDCIVPPVSSSRLPLVL
Sbjct: 157 SQVCTSAKEKIINSDTNKGGLTLEGSEGFVRNGEEEILEKDALDDCIVPPVSSSRLPLVL 216

Query: 181 SDKVHRLKALVECEGTSIDLSGDMGAVGRVVVSDSSSAKNELCLDLKGTLYRAVIVPSRT 240
           SDKVHRLKALVECEGTSIDLSGDMGAVGRVVVSDSSSAKNELCLDLKGTLYRAVIVPSRT
Sbjct: 217 SDKVHRLKALVECEGTSIDLSGDMGAVGRVVVSDSSSAKNELCLDLKGTLYRAVIVPSRT 276

Query: 241 FCIVSFGQSEAKIESIMNDFIQLKALSKVDEAETMVEGTLDGFSFDSEDEAEKITKVASS 300
           FCIVSFGQSEAKIESIMNDFIQLKALSKVDEAETMVEGTLDGFSFDSEDEAEKITKVASS
Sbjct: 277 FCIVSFGQSEAKIESIMNDFIQLKALSKVDEAETMVEGTLDGFSFDSEDEAEKITKVASS 336

Query: 301 PADQNEPVEGLNTKSKNKAEKSSGRKRVKSGGRLQAPKKTRKKVQGSKTKNAKSKK 357
           PADQNEPVEGLNTKSKNKAEKSSGRKRVKSGGRLQAPKKTRKKVQGSKTKNAKSKK
Sbjct: 337 PADQNEPVEGLNTKSKNKAEKSSGRKRVKSGGRLQAPKKTRKKVQGSKTKNAKSKK 392

[Close]

BLAST of MELO3C023191 vs. NCBI nr
Match: gi|659121793|ref|XP_008460816.1| (PREDICTED: DNA-binding protein BIN4 isoform X3 [Cucumis melo])

HSP 1 Score: 692.2 bits (1785), Expect = 4.8e-196
Identity = 356/371 (95.96%), Postives = 356/371 (95.96%), Query Frame = 1


Query: 1   MDNAIDQRDPSSHKTTQDLDGDQIQGDCGNHNLAKEGKLDRRTGHENSEHSVWMLSSDSE 60
           MDNAIDQRDPSSHKTTQDLDGDQIQGDCGNHNLAKEGKLDRRTGHENSEHSVWMLSSDSE
Sbjct: 1   MDNAIDQRDPSSHKTTQDLDGDQIQGDCGNHNLAKEGKLDRRTGHENSEHSVWMLSSDSE 60

Query: 61  SCSDNNFIKEDCNHHEELSELATSEIQGRRKDENAGRRFTEGKSKSRKVSKEMSPKKKIK 120
           SCSDNNFIKEDCNHHEELSELATSEIQGRRKDENAGRRFTEGKSKSRKVSKEMSPKKKIK
Sbjct: 61  SCSDNNFIKEDCNHHEELSELATSEIQGRRKDENAGRRFTEGKSKSRKVSKEMSPKKKIK 120

Query: 121 SQVCTSAKEKIINSDTNKGGLTLEGSEGFVRNGEEEILEKDALDDCIVPPVSSSRLPLVL 180
           SQVCTSAKEKIINSDTNKGGLTLEGSEGFVRNGEEEILEKDALDDCIVPPVSSSRLPLVL
Sbjct: 121 SQVCTSAKEKIINSDTNKGGLTLEGSEGFVRNGEEEILEKDALDDCIVPPVSSSRLPLVL 180

Query: 181 SDKVHRLKALVECEGTSIDLSGDMGAVGRVVVSDSSSAKNELCLDLK------------- 240
           SDKVHRLKALVECEGTSIDLSGDMGAVGRVVVSDSSSAKNELCLDLK             
Sbjct: 181 SDKVHRLKALVECEGTSIDLSGDMGAVGRVVVSDSSSAKNELCLDLKGKFHPNMLCFGSK 240

Query: 241 --GTLYRAVIVPSRTFCIVSFGQSEAKIESIMNDFIQLKALSKVDEAETMVEGTLDGFSF 300
             GTLYRAVIVPSRTFCIVSFGQSEAKIESIMNDFIQLKALSKVDEAETMVEGTLDGFSF
Sbjct: 241 RSGTLYRAVIVPSRTFCIVSFGQSEAKIESIMNDFIQLKALSKVDEAETMVEGTLDGFSF 300

Query: 301 DSEDEAEKITKVASSPADQNEPVEGLNTKSKNKAEKSSGRKRVKSGGRLQAPKKTRKKVQ 357
           DSEDEAEKITKVASSPADQNEPVEGLNTKSKNKAEKSSGRKRVKSGGRLQAPKKTRKKVQ
Sbjct: 301 DSEDEAEKITKVASSPADQNEPVEGLNTKSKNKAEKSSGRKRVKSGGRLQAPKKTRKKVQ 360

[Close]

BLAST of MELO3C023191 vs. NCBI nr
Match: gi|659121789|ref|XP_008460814.1| (PREDICTED: DNA-binding protein BIN4 isoform X1 [Cucumis melo])

HSP 1 Score: 692.2 bits (1785), Expect = 4.8e-196
Identity = 356/371 (95.96%), Postives = 356/371 (95.96%), Query Frame = 1


Query: 1   MDNAIDQRDPSSHKTTQDLDGDQIQGDCGNHNLAKEGKLDRRTGHENSEHSVWMLSSDSE 60
           MDNAIDQRDPSSHKTTQDLDGDQIQGDCGNHNLAKEGKLDRRTGHENSEHSVWMLSSDSE
Sbjct: 37  MDNAIDQRDPSSHKTTQDLDGDQIQGDCGNHNLAKEGKLDRRTGHENSEHSVWMLSSDSE 96

Query: 61  SCSDNNFIKEDCNHHEELSELATSEIQGRRKDENAGRRFTEGKSKSRKVSKEMSPKKKIK 120
           SCSDNNFIKEDCNHHEELSELATSEIQGRRKDENAGRRFTEGKSKSRKVSKEMSPKKKIK
Sbjct: 97  SCSDNNFIKEDCNHHEELSELATSEIQGRRKDENAGRRFTEGKSKSRKVSKEMSPKKKIK 156

Query: 121 SQVCTSAKEKIINSDTNKGGLTLEGSEGFVRNGEEEILEKDALDDCIVPPVSSSRLPLVL 180
           SQVCTSAKEKIINSDTNKGGLTLEGSEGFVRNGEEEILEKDALDDCIVPPVSSSRLPLVL
Sbjct: 157 SQVCTSAKEKIINSDTNKGGLTLEGSEGFVRNGEEEILEKDALDDCIVPPVSSSRLPLVL 216

Query: 181 SDKVHRLKALVECEGTSIDLSGDMGAVGRVVVSDSSSAKNELCLDLK------------- 240
           SDKVHRLKALVECEGTSIDLSGDMGAVGRVVVSDSSSAKNELCLDLK             
Sbjct: 217 SDKVHRLKALVECEGTSIDLSGDMGAVGRVVVSDSSSAKNELCLDLKGKFHPNMLCFGSK 276

Query: 241 --GTLYRAVIVPSRTFCIVSFGQSEAKIESIMNDFIQLKALSKVDEAETMVEGTLDGFSF 300
             GTLYRAVIVPSRTFCIVSFGQSEAKIESIMNDFIQLKALSKVDEAETMVEGTLDGFSF
Sbjct: 277 RSGTLYRAVIVPSRTFCIVSFGQSEAKIESIMNDFIQLKALSKVDEAETMVEGTLDGFSF 336

Query: 301 DSEDEAEKITKVASSPADQNEPVEGLNTKSKNKAEKSSGRKRVKSGGRLQAPKKTRKKVQ 357
           DSEDEAEKITKVASSPADQNEPVEGLNTKSKNKAEKSSGRKRVKSGGRLQAPKKTRKKVQ
Sbjct: 337 DSEDEAEKITKVASSPADQNEPVEGLNTKSKNKAEKSSGRKRVKSGGRLQAPKKTRKKVQ 396

[Close]

BLAST of MELO3C023191 vs. NCBI nr
Match: gi|449459184|ref|XP_004147326.1| (PREDICTED: DNA-binding protein BIN4 [Cucumis sativus])

HSP 1 Score: 650.6 bits (1677), Expect = 1.6e-183
Identity = 331/356 (92.98%), Postives = 343/356 (96.35%), Query Frame = 1


Query: 1   MDNAIDQRDPSSHKTTQDLDGDQIQGDCGNHNLAKEGKLDRRTGHENSEHSVWMLSSDSE 60
           MDNAIDQRDPSSHKTTQDLDGDQIQGDCGNHNLAKE KLDR TGHENS+HSVWMLS DSE
Sbjct: 37  MDNAIDQRDPSSHKTTQDLDGDQIQGDCGNHNLAKEVKLDRHTGHENSKHSVWMLSLDSE 96

Query: 61  SCSDNNFIKEDCNHHEELSELATSEIQGRRKDENAGRRFTEGKSKSRKVSKEMSPKKKIK 120
           SCSDNNFIKED ++HEEL+ELATSEIQGRRKDENAGRRFTEGKSKSRKVS EMSPKKK+K
Sbjct: 97  SCSDNNFIKEDYSYHEELAELATSEIQGRRKDENAGRRFTEGKSKSRKVSNEMSPKKKVK 156

Query: 121 SQVCTSAKEKIINSDTNKGGLTLEGSEGFVRNGEEEILEKDALDDCIVPPVSSSRLPLVL 180
           S+VCTSAKE I+NS TNKGG T+EGSEG VRNG+ EILEKDALDDCI PPVSSSRLPLVL
Sbjct: 157 SEVCTSAKENIMNSGTNKGGSTMEGSEGHVRNGDVEILEKDALDDCIGPPVSSSRLPLVL 216

Query: 181 SDKVHRLKALVECEGTSIDLSGDMGAVGRVVVSDSSSAKNELCLDLKGTLYRAVIVPSRT 240
           SDK HRLKALVECEGTSIDLSGDMGAVGRVVVSDSSSAKNELCLDLKGTLYRAVIVPSRT
Sbjct: 217 SDKAHRLKALVECEGTSIDLSGDMGAVGRVVVSDSSSAKNELCLDLKGTLYRAVIVPSRT 276

Query: 241 FCIVSFGQSEAKIESIMNDFIQLKALSKVDEAETMVEGTLDGFSFDSEDEAEKITKVASS 300
           FCIVSFGQSEAKIESIMNDFIQLKALSKVDEAETMVEGTLDGFSFDSED+AEKITK A+S
Sbjct: 277 FCIVSFGQSEAKIESIMNDFIQLKALSKVDEAETMVEGTLDGFSFDSEDDAEKITK-AAS 336

Query: 301 PADQNEPVEGLNTKSKNKAEKSSGRKRVKSGGRLQAPKKTRKKVQGSKTKNAKSKK 357
           PADQNEPVEGLNTKSKNKAEKSSGRKRVK+GGRLQAPKKTRKKVQGSKTKNAKSKK
Sbjct: 337 PADQNEPVEGLNTKSKNKAEKSSGRKRVKTGGRLQAPKKTRKKVQGSKTKNAKSKK 391

[Close]

BLAST of MELO3C023191 vs. NCBI nr
Match: gi|700207116|gb|KGN62235.1| (hypothetical protein Csa_2G338790 [Cucumis sativus])

HSP 1 Score: 632.1 bits (1629), Expect = 5.9e-178
Identity = 321/346 (92.77%), Postives = 333/346 (96.24%), Query Frame = 1


Query: 1   MDNAIDQRDPSSHKTTQDLDGDQIQGDCGNHNLAKEGKLDRRTGHENSEHSVWMLSSDSE 60
           MDNAIDQRDPSSHKTTQDLDGDQIQGDCGNHNLAKE KLDR TGHENS+HSVWMLS DSE
Sbjct: 26  MDNAIDQRDPSSHKTTQDLDGDQIQGDCGNHNLAKEVKLDRHTGHENSKHSVWMLSLDSE 85

Query: 61  SCSDNNFIKEDCNHHEELSELATSEIQGRRKDENAGRRFTEGKSKSRKVSKEMSPKKKIK 120
           SCSDNNFIKED ++HEEL+ELATSEIQGRRKDENAGRRFTEGKSKSRKVS EMSPKKK+K
Sbjct: 86  SCSDNNFIKEDYSYHEELAELATSEIQGRRKDENAGRRFTEGKSKSRKVSNEMSPKKKVK 145

Query: 121 SQVCTSAKEKIINSDTNKGGLTLEGSEGFVRNGEEEILEKDALDDCIVPPVSSSRLPLVL 180
           S+VCTSAKE I+NS TNKGG T+EGSEG VRNG+ EILEKDALDDCI PPVSSSRLPLVL
Sbjct: 146 SEVCTSAKENIMNSGTNKGGSTMEGSEGHVRNGDVEILEKDALDDCIGPPVSSSRLPLVL 205

Query: 181 SDKVHRLKALVECEGTSIDLSGDMGAVGRVVVSDSSSAKNELCLDLKGTLYRAVIVPSRT 240
           SDK HRLKALVECEGTSIDLSGDMGAVGRVVVSDSSSAKNELCLDLKGTLYRAVIVPSRT
Sbjct: 206 SDKAHRLKALVECEGTSIDLSGDMGAVGRVVVSDSSSAKNELCLDLKGTLYRAVIVPSRT 265

Query: 241 FCIVSFGQSEAKIESIMNDFIQLKALSKVDEAETMVEGTLDGFSFDSEDEAEKITKVASS 300
           FCIVSFGQSEAKIESIMNDFIQLKALSKVDEAETMVEGTLDGFSFDSED+AEKITK A+S
Sbjct: 266 FCIVSFGQSEAKIESIMNDFIQLKALSKVDEAETMVEGTLDGFSFDSEDDAEKITK-AAS 325

Query: 301 PADQNEPVEGLNTKSKNKAEKSSGRKRVKSGGRLQAPKKTRKKVQG 347
           PADQNEPVEGLNTKSKNKAEKSSGRKRVK+GGRLQAPKKTRKKVQG
Sbjct: 326 PADQNEPVEGLNTKSKNKAEKSSGRKRVKTGGRLQAPKKTRKKVQG 370

The following BLAST results are available for this feature:

BLAST of MELO3C023191 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BIN4_ARATH	5.3e-54	39.84	DNA-binding protein BIN4 OS=Arabidopsis thaliana GN=BIN4 PE=1 SV=2	[more]

BLAST of MELO3C023191 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJZ5_CUCSA	4.1e-178	92.77	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G338790 PE=4 SV=1	[more]
F6H7A6_VITVI	3.5e-76	50.86	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0098g00630 PE=4 SV=...	[more]
G7J9P4_MEDTR	6.3e-70	47.75	Uncharacterized protein OS=Medicago truncatula GN=MTR_3g093330 PE=4 SV=1	[more]
A0A0D2RYE2_GOSRA	4.1e-69	48.45	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G126300 PE=4 SV=1	[more]
K7KUX9_SOYBN	1.2e-68	47.04	Uncharacterized protein OS=Glycine max GN=GLYMA_06G139100 PE=4 SV=1	[more]

BLAST of MELO3C023191 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G24630.6	3.0e-55	39.84	double-stranded DNA binding	[more]

BLAST of MELO3C023191 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659121791\|ref\|XP_008460815.1\|	4.6e-199	100.00	PREDICTED: DNA-binding protein BIN4 isoform X2 [Cucumis melo]	[more]
gi\|659121793\|ref\|XP_008460816.1\|	4.8e-196	95.96	PREDICTED: DNA-binding protein BIN4 isoform X3 [Cucumis melo]	[more]
gi\|659121789\|ref\|XP_008460814.1\|	4.8e-196	95.96	PREDICTED: DNA-binding protein BIN4 isoform X1 [Cucumis melo]	[more]
gi\|449459184\|ref\|XP_004147326.1\|	1.6e-183	92.98	PREDICTED: DNA-binding protein BIN4 [Cucumis sativus]	[more]
gi\|700207116\|gb\|KGN62235.1\|	5.9e-178	92.77	hypothetical protein Csa_2G338790 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

Vocabulary: **Molecular Function**
Term	Definition
GO:0003690	double-stranded DNA binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0009330	DNA topoisomerase complex (ATP-hydrolyzing)

Vocabulary: **Biological Process**
Term	Definition
GO:0042023	DNA endoreduplication

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030154	cell differentiation
biological_process	GO:0016043	cellular component organization
biological_process	GO:0044260	cellular macromolecule metabolic process
biological_process	GO:0051276	chromosome organization
biological_process	GO:0042023	DNA endoreduplication
biological_process	GO:0007126	meiotic nuclear division
biological_process	GO:0090304	nucleic acid metabolic process
biological_process	GO:0048522	positive regulation of cellular process
biological_process	GO:0033043	regulation of organelle organization
biological_process	GO:0048731	system development
biological_process	GO:0009888	tissue development
biological_process	GO:0048856	anatomical structure development
biological_process	GO:0044763	single-organism cellular process
biological_process	GO:0044767	single-organism developmental process
cellular_component	GO:0009330	DNA topoisomerase complex (ATP-hydrolyzing)
molecular_function	GO:0003690	double-stranded DNA binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU58431	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C023191T2	MELO3C023191T2	mRNA
MELO3C023191T1	MELO3C023191T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU58431	MU58431	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34810	FAMILY NOT NAMED	coord: 6..108 score: 2.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C023191	Csa2G338790	Cucumber (Chinese Long) v2	cumeB095
MELO3C023191	CSPI02G16460	Wild cucumber (PI 183967)	cpimeB094
MELO3C023191	Cucsa.228150	Cucumber (Gy14) v1	cgymeB387
MELO3C023191	CsGy2G016070	Cucumber (Gy14) v2	cgybmeB081
MELO3C023191	CsaV3_2G019700	Cucumber (Chinese Long) v3	cucmeB100

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C023191	Wax gourd	mewgoB131
MELO3C023191	Watermelon (Charleston Gray)	mewcgB091
MELO3C023191	Watermelon (97103) v1	mewmB123
MELO3C023191	Bottle gourd (USVL1VR-Ls)	lsimeB056
MELO3C023191	Watermelon (97103) v2	mewmbB093