MELO3C023173 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C023173
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Sister chromatid cohesion 1 protein 3
Location	chr8 : 16377330 .. 16379545 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCCCGCCACCTCATGTGGATGTTGAAATCCCAAGTGTTTTTGAAGATGTACTTAACCCTGGCCATGAAAGGGACAATATGCCACATAGTTTTCTAGAAGTCGAAGTTCCGGATGCCATGAATGTTCAAGATTTTGGTCCGAGTAATAAGAGCATTTCTGAGGGCGATGGGTCTCCTCAAAATGTTCCAGAAATGGAAATTCCACGAGAGGTTGTCCCTGGTTTTAGTACAAAAGATGTTCCTATAGTGTCTCCACCCGGTGGTGATGTCATATCTGAACCACCCAGCCCCATAGATGAGAATATAAATCCGGATAAGCTATCAATCATTGAAGACAAGATGACTCCGACAAAGACATCATTACCGCATGAGCAAAGTGCTGGACCTCCAACTTCTGCTTCTCCACTAGAGGCATTGAGTACGTTTAATTCTATTTGATCTATATCTGGAGTTGTTCTAATTGGTGGAAAATAGCTAACAGTATCTCACTTTTGGATGTTTTTTCTCCATGTGTTTCAGTTCAACCTTCCGTAGAGCATGTTCTTCAACCCACTCCTCCACAACAGCCAAGGCCAAGATCGAGGAAGAGAAAACAGTTCTTTGATAAGTCTACTGTGTTGACTAATAAGTATGTTTGTGATATCTATCATTTGACTTTTGTCTTTATTTTAATCAATTATTGACATAGAAAGTTGTGTTGCAGGTTTATGAAAAAGGCTCTTAAGGATTCTAGTGATTTATTGCGTGAGAGAAGAAACATTCCAAGTTCTTCTTTGGAAGTATGGAAGTTAAACAACAAGCTGAGAGAAAAAGAAGTTTTCCATCATCCTTCCATCACTGGTAAGCGATCTTTTGTTCTCGTTTTTCTTTCTACTTCTTTGAGCTTCTTGAATAGTAGAAAGAAATCGAAAATTTTGTATGCAGGTCTTTGTCATAATCTCTCAGATATTCTTAATTTGAACTACATTGCTACAAAATGTCGTACAATATCCTTGGAGGAAGCTCTGGAGAATTTTGGGGATGCAAGAAATGTTGCTTCCATGAGTGAAACTTTATCAGGCCTAGTAGATACTCCACCTCTAGCGCCAGAAGTTGCTTCCACTCCATATACCGAAATTCCGACCACTGTCGATTCTGCTGGAAACATTCCTTCAGCAGGCAAAACATTTTTGCCCCCTATAGTTGCTCCATCTCCAGAAGTTGCTTCTTCACCACAATCTGGAATCCCACCCACTGTCAATCCTGCTTCTGTTTCCTATTCTGGCATGGAGATTGAACATATGTGTGACGCTGAAGGAAATCGAGGGGACGTTACCTTGGGAGACTTAGATGCTTCTCCAGAAAGGCCCATGCCTTCTCCGAGGCCTTCTGAAGGCTTAGTTTCCCCTGTACCAACTGAACCTTCAACCTCCATGTTTGCAACTCCGGGGACAATTGACGAGGGATTGGGTGCAGAAGATCTTACACTCTCTGATAAGCAGATTGGTACTGCAGACGAGGTAGGTCTTTTTATTAATATTAGTGTTTCATATTCTTCTGTAACTTTCAAGTTTAATGCAATCTTCCCTCTTATCAGCAGAAAAAGAGGATAGTACCAGCATGGCCACGAAAAAAAGAAAAAAATAGACTTCATGTATTAAATAATTTTTTGTCATTAATATTTGGATTAAAGTTGAGAAATAATTTAATGGCATGTCGTGATCTTCATTTTCTGGATTTGAATTAGTTTGATTACTAAAGGTTCAATACATGAACTATTAATTTGAGATGATTTTGGAGCAAGAACAAGAATTTTGAATTAGGACTTACTATATTATGTTATATTACCACTTTTGGACATGCTAGAGTTAAAGTAGAAGTGTTGATTAAATCATTTGAATGATCACTTACATTTCTTCATCCTTTTAAGTTCTAACTTGCTGAGATATTTATTGTAGGATCTTTATTTCCTGGAAGTAGATAGCTCACCAGCTAGTAAATCAAGTAATGTACTTCCTGTTACAATTTATATGCTTCCTTCAAATATATTTCTTGGGTGCCTTATATCACTTGGAATTTTGATGTGGTGTTGGGACTTAACTTGCTTGTATACAGGATCTCAGGGAACACATGGTGTTGACTCCTTGTCAGTGAGAACAAGGTACTTTTCTATCATTTGCTTTACAACCCTTTTAATTAAAGTAAACCTATTTAACCGTCATGGATTGGGCTAG

mRNA sequence

ATGATCCCGCCACCTCATGTGGATGTTGAAATCCCAAGTGTTTTTGAAGATGTACTTAACCCTGGCCATGAAAGGGACAATATGCCACATAGTTTTCTAGAAGTCGAAGTTCCGGATGCCATGAATGTTCAAGATTTTGGTCCGAGTAATAAGAGCATTTCTGAGGGCGATGGGTCTCCTCAAAATGTTCCAGAAATGGAAATTCCACGAGAGGTTGTCCCTGGTTTTAGTACAAAAGATGTTCCTATAGTGTCTCCACCCGGTGGTGATGTCATATCTGAACCACCCAGCCCCATAGATGAGAATATAAATCCGGATAAGCTATCAATCATTGAAGACAAGATGACTCCGACAAAGACATCATTACCGCATGAGCAAAGTGCTGGACCTCCAACTTCTGCTTCTCCACTAGAGGCATTGATTCAACCTTCCGTAGAGCATGTTCTTCAACCCACTCCTCCACAACAGCCAAGGCCAAGATCGAGGAAGAGAAAACAGTTCTTTGATAAGTCTACTGTGTTGACTAATAAGTTTATGAAAAAGGCTCTTAAGGATTCTAGTGATTTATTGCGTGAGAGAAGAAACATTCCAAGTTCTTCTTTGGAAGTATGGAAGTTAAACAACAAGCTGAGAGAAAAAGAAGTTTTCCATCATCCTTCCATCACTGGTCTTTGTCATAATCTCTCAGATATTCTTAATTTGAACTACATTGCTACAAAATGTCGTACAATATCCTTGGAGGAAGCTCTGGAGAATTTTGGGGATGCAAGAAATGTTGCTTCCATGAGTGAAACTTTATCAGGCCTAGTAGATACTCCACCTCTAGCGCCAGAAGTTGCTTCCACTCCATATACCGAAATTCCGACCACTGTCGATTCTGCTGGAAACATTCCTTCAGCAGGCAAAACATTTTTGCCCCCTATAGTTGCTCCATCTCCAGAAGTTGCTTCTTCACCACAATCTGGAATCCCACCCACTGTCAATCCTGCTTCTGTTTCCTATTCTGGCATGGAGATTGAACATATGTGTGACGCTGAAGGAAATCGAGGGGACGTTACCTTGGGAGACTTAGATGCTTCTCCAGAAAGGCCCATGCCTTCTCCGAGGCCTTCTGAAGGCTTAGTTTCCCCTGTACCAACTGAACCTTCAACCTCCATGTTTGCAACTCCGGGGACAATTGACGAGGGATTGGGTGCAGAAGATCTTACACTCTCTGATAAGCAGATTGGTACTGCAGACGAGGATCTTTATTTCCTGGAAGTAGATAGCTCACCAGCTAGTAAATCAAGATCTCAGGGAACACATGGTGTTGACTCCTTGTCAGTGAGAACAAGGTACTTTTCTATCATTTGCTTTACAACCCTTTTAATTAAAGTAAACCTATTTAACCGTCATGGATTGGGCTAG

Coding sequence (CDS)

ATGATCCCGCCACCTCATGTGGATGTTGAAATCCCAAGTGTTTTTGAAGATGTACTTAACCCTGGCCATGAAAGGGACAATATGCCACATAGTTTTCTAGAAGTCGAAGTTCCGGATGCCATGAATGTTCAAGATTTTGGTCCGAGTAATAAGAGCATTTCTGAGGGCGATGGGTCTCCTCAAAATGTTCCAGAAATGGAAATTCCACGAGAGGTTGTCCCTGGTTTTAGTACAAAAGATGTTCCTATAGTGTCTCCACCCGGTGGTGATGTCATATCTGAACCACCCAGCCCCATAGATGAGAATATAAATCCGGATAAGCTATCAATCATTGAAGACAAGATGACTCCGACAAAGACATCATTACCGCATGAGCAAAGTGCTGGACCTCCAACTTCTGCTTCTCCACTAGAGGCATTGATTCAACCTTCCGTAGAGCATGTTCTTCAACCCACTCCTCCACAACAGCCAAGGCCAAGATCGAGGAAGAGAAAACAGTTCTTTGATAAGTCTACTGTGTTGACTAATAAGTTTATGAAAAAGGCTCTTAAGGATTCTAGTGATTTATTGCGTGAGAGAAGAAACATTCCAAGTTCTTCTTTGGAAGTATGGAAGTTAAACAACAAGCTGAGAGAAAAAGAAGTTTTCCATCATCCTTCCATCACTGGTCTTTGTCATAATCTCTCAGATATTCTTAATTTGAACTACATTGCTACAAAATGTCGTACAATATCCTTGGAGGAAGCTCTGGAGAATTTTGGGGATGCAAGAAATGTTGCTTCCATGAGTGAAACTTTATCAGGCCTAGTAGATACTCCACCTCTAGCGCCAGAAGTTGCTTCCACTCCATATACCGAAATTCCGACCACTGTCGATTCTGCTGGAAACATTCCTTCAGCAGGCAAAACATTTTTGCCCCCTATAGTTGCTCCATCTCCAGAAGTTGCTTCTTCACCACAATCTGGAATCCCACCCACTGTCAATCCTGCTTCTGTTTCCTATTCTGGCATGGAGATTGAACATATGTGTGACGCTGAAGGAAATCGAGGGGACGTTACCTTGGGAGACTTAGATGCTTCTCCAGAAAGGCCCATGCCTTCTCCGAGGCCTTCTGAAGGCTTAGTTTCCCCTGTACCAACTGAACCTTCAACCTCCATGTTTGCAACTCCGGGGACAATTGACGAGGGATTGGGTGCAGAAGATCTTACACTCTCTGATAAGCAGATTGGTACTGCAGACGAGGATCTTTATTTCCTGGAAGTAGATAGCTCACCAGCTAGTAAATCAAGATCTCAGGGAACACATGGTGTTGACTCCTTGTCAGTGAGAACAAGGTACTTTTCTATCATTTGCTTTACAACCCTTTTAATTAAAGTAAACCTATTTAACCGTCATGGATTGGGCTAG

Protein sequence

MIPPPHVDVEIPSVFEDVLNPGHERDNMPHSFLEVEVPDAMNVQDFGPSNKSISEGDGSPQNVPEMEIPREVVPGFSTKDVPIVSPPGGDVISEPPSPIDENINPDKLSIIEDKMTPTKTSLPHEQSAGPPTSASPLEALIQPSVEHVLQPTPPQQPRPRSRKRKQFFDKSTVLTNKFMKKALKDSSDLLRERRNIPSSSLEVWKLNNKLREKEVFHHPSITGLCHNLSDILNLNYIATKCRTISLEEALENFGDARNVASMSETLSGLVDTPPLAPEVASTPYTEIPTTVDSAGNIPSAGKTFLPPIVAPSPEVASSPQSGIPPTVNPASVSYSGMEIEHMCDAEGNRGDVTLGDLDASPERPMPSPRPSEGLVSPVPTEPSTSMFATPGTIDEGLGAEDLTLSDKQIGTADEDLYFLEVDSSPASKSRSQGTHGVDSLSVRTRYFSIICFTTLLIKVNLFNRHGLG*

Homology

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BLAST of MELO3C023173 vs. Swiss-Prot
Match: SCC13_ARATH (Sister chromatid cohesion 1 protein 3 OS=Arabidopsis thaliana GN=SYN3 PE=2 SV=2)

HSP 1 Score: 146.4 bits (368), Expect = 8.1e-34
Identity = 136/429 (31.70%), Postives = 196/429 (45.69%), Query Frame = 1


Query: 27  NMPHSFLEVEVPDAMNVQDFGPSNKSISEGDGSPQNVPEMEIPREVVPGFSTKDVPIVSP 86
           N+   F EV+ P   N+ +    N   ++   SP  VPE+E  R+     S    P  + 
Sbjct: 215 NVTEEFTEVQDPRQSNLTEERIPNSERNDAT-SPGTVPEIERMRDAAHDLSPTSHPSFAA 274

Query: 87  PGGDVISEPPSPIDENINPDKLSI--IEDKMTPTKTSLPHEQSAGPPTSASPLEA----L 146
              DV  E    +DE +N  + +I  I+++M  +      E  +G P SA+  E      
Sbjct: 275 QQQDVRVERTESLDETLNEKEPTIPSIDEEMLNSGRHSAFELRSGSPGSAAGSEEERADF 334

Query: 147 IQPSVEHVLQPTPPQQPRPRSRKRKQFFDKSTVLTNKFMKKALKDSSDLLRERRNIPSSS 206
           + PS + VLQP+PP QP+ R+RKRK  FD  TVLTNK + + LKD SD LR+R+ +PSS 
Sbjct: 335 VHPSPQLVLQPSPPPQPQRRARKRKN-FDGVTVLTNKNISERLKDPSDTLRKRKKMPSSK 394

Query: 207 LEVWKLNNKLREKEVFHHPSITGLCHNLSDILNLNYIATKCRTISLEEALENFGDARNVA 266
           L+ W++NN+ R+ + F+ P  TG   +L ++   +Y+A+K      +E L         A
Sbjct: 395 LKFWRMNNQSRKDQNFNEPLFTGFSDDLRNVFEKDYVASKPHLAVSDETLP------EPA 454

Query: 267 SMSETLSGLVDTPPLAPEVAST---------PYTEIPTTVDSAGNIPSAGKTFLPPIVAP 326
           S+S T    V+  P++P   ST         P  +    +DSAG           P  A 
Sbjct: 455 SVSPTREAEVEINPVSPIPDSTNPDSTVQLSPAQQTEDVLDSAG-----------PRPAH 514

Query: 327 SPEVASSPQSGIPPTVNPASVSYSGMEIEHMCDAEGNRGDVTLGDLDASPERPMP----- 386
           +  VA+  QS       P +     M IEH+ D     G   +  + + P R  P     
Sbjct: 515 AESVATEAQS-------PRTFDNDDMGIEHLRD-----GGFPV-YMPSPPPRSSPFRTDD 574

Query: 387 -SPRPSEGLVSPVPTEPSTSMFATPGTIDEGL-GAEDLTLSDKQIGTADEDLYFLEV-DS 433
            + +          TEPSTS      T+ E L G  +L LS     T DE+LYFLEV  +
Sbjct: 575 FTTQSGNWETESYRTEPSTS------TVPEDLPGQRNLGLSPVSERT-DEELYFLEVGGN 604

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BLAST of MELO3C023173 vs. TrEMBL
Match: A0A0A0L109_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G153290 PE=4 SV=1)

HSP 1 Score: 781.9 bits (2018), Expect = 4.2e-223
Identity = 398/451 (88.25%), Postives = 416/451 (92.24%), Query Frame = 1


Query: 1   MIPPPHVD----VEIPSVFEDVLNPGHERDNMPHSFLEVEVPDAMNVQDFGPSNKSISEG 60
           MIPPPHVD    VE+PS FED+LN GH+ DNMPHSF EVEV DAMNVQDFGPSNK I E 
Sbjct: 186 MIPPPHVDITMDVEVPSDFEDILNTGHDGDNMPHSFPEVEVTDAMNVQDFGPSNKGIPED 245

Query: 61  DGSPQNVPEMEIPREVVPGFSTKDVPIVSPPGGDVISEPPSPIDENINPDKLSIIEDKMT 120
             SPQNVPEME+PR+V P FSTKDVPIVSPPGGDVISEPPSPIDENINPDKLSIIEDKMT
Sbjct: 246 VLSPQNVPEMEVPRDV-PVFSTKDVPIVSPPGGDVISEPPSPIDENINPDKLSIIEDKMT 305

Query: 121 PTKTSLPHEQSAGPPTSASPLEALIQPSVEHVLQPTPPQQPRPRSRKRKQFFDKSTVLTN 180
           PTKTSLPHEQSAGPPTSASP EALIQPSVEHVLQPTPPQQPRPRSRKRKQFFDKSTVLTN
Sbjct: 306 PTKTSLPHEQSAGPPTSASPPEALIQPSVEHVLQPTPPQQPRPRSRKRKQFFDKSTVLTN 365

Query: 181 KFMKKALKDSSDLLRERRNIPSSSLEVWKLNNKLREKEVFHHPSITGLCHNLSDILNLNY 240
           KFMKKAL+DSSDLLRERRNIPSSSLEVWKLNNKLREK+VFHHPSITGLCHNLSDI N++Y
Sbjct: 366 KFMKKALEDSSDLLRERRNIPSSSLEVWKLNNKLREKKVFHHPSITGLCHNLSDIFNVDY 425

Query: 241 IATKCRTISLEEALENFGDARNVASMSETLSGLVDTPPLAPEVASTPYTEIPTTVDSAGN 300
           IATKCRTISLEEALENFGDARNV S SETLSGL+  PPLAPEVASTPYTEIP++VD AGN
Sbjct: 426 IATKCRTISLEEALENFGDARNVTSTSETLSGLIYAPPLAPEVASTPYTEIPSSVDPAGN 485

Query: 301 IPSAGKTFLPPIVAPSPEVASSPQSGIPPTVNPASVSYSGMEIEHMCDAEGNRGDVTLGD 360
           IPSAG+TF+ P VAPSPEV+SSPQS IPPTVNPASVSYSG EIEH+ D EGNRGD T+GD
Sbjct: 486 IPSAGETFVLPTVAPSPEVSSSPQSRIPPTVNPASVSYSG-EIEHIRDVEGNRGDETMGD 545

Query: 361 LDASPERPMPSPRPSEGLVSPVP--TEPSTSMFATPGTIDEGLGAEDLTLSDKQIGTADE 420
           LDASPERPMPSPRPSEGLV+PVP  TEPSTSMF TPGTIDEGLGAEDLTLSDKQIGTADE
Sbjct: 546 LDASPERPMPSPRPSEGLVTPVPVSTEPSTSMFETPGTIDEGLGAEDLTLSDKQIGTADE 605

Query: 421 DLYFLEVDSSPASKSRSQGTHGVDSLSVRTR 446
           DLYFLEVDSSPA KSRSQGT GVDSLSVRTR
Sbjct: 606 DLYFLEVDSSPAGKSRSQGTRGVDSLSVRTR 634

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BLAST of MELO3C023173 vs. TrEMBL
Match: M5XNA8_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa019289mg PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 7.3e-58
Identity = 185/489 (37.83%), Postives = 251/489 (51.33%), Query Frame = 1


Query: 16  EDVLNPGHERDNMPH--------SFLEVEVPDAMNVQDFGPSNKSIS-----EGDGSPQN 75
           E   +PG++ D            +F EVEVP  +  +D  P+N+  S       DGSP++
Sbjct: 192 EGAPSPGNQTDEQIRFSDDFTLPNFPEVEVPQHVGFEDPVPTNQRESIDLRDRDDGSPEH 251

Query: 76  VPEMEIPREVVPGFSTKDVPIVSPPGGDVISEPPSPID-ENINPDKLSIIEDKMTPTKTS 135
           V EME+ R+ VP FS++ +P VSP   D ++EP   +D E    D LS I ++  P+   
Sbjct: 252 VQEMEVLRDAVPDFSSEILPPVSPNNRDDVTEPHRSVDPERSEKDILSPIMEETIPSGGP 311

Query: 136 LP-HEQSAGPPTSASPLEALIQPSVEHV---LQPTPP-QQPRPRSRKRKQFFDKSTVLTN 195
            P  + S+GPP S + L   +Q    HV   LQPTPP +QPR R RKRKQ+FD++ VL+N
Sbjct: 312 SPLFQPSSGPPASVASLPEGLQNIDTHVSFELQPTPPPEQPRARPRKRKQYFDETLVLSN 371

Query: 196 KFMKKALKDSSDLLRERRNIPSSSLEVWKLNNKLREKEVFHHPSITGLCHNLSDILNLNY 255
           +FM K ++D+SDLLR+RRNIP S+L VWKLNN LR++++F  PS++GLC +L +I N +Y
Sbjct: 372 EFMNKTIQDTSDLLRKRRNIPCSALGVWKLNNSLRKEQIFFQPSLSGLCSDLRNISNKDY 431

Query: 256 IATKCRTISLEEALENFGDARNVASMSETLSGLVDTPPLAPEVASTPYTEIPTTVDSAGN 315
           I+TK      EEAL +    R+ +  +E  S           VA +P    P T +    
Sbjct: 432 ISTKSHLF--EEALPDSRPTRSPSPTTEAFS--------EARVAQSPR---PFTTE---- 491

Query: 316 IPSAGKTFLPPIVAPSPEVASSPQSGIPPTVNPASVSYSGM---------EIEHMCDAEG 375
                       ++P  +VA S    +P  V  AS  Y G          EI+ +   E 
Sbjct: 492 ------------ISPERKVARS----LP--VTEASTEYRGAQSPATQCNPEIDQLRHVEE 551

Query: 376 NRGDVTLGDLDASPE----------RPMPSPRPSEGLVSPVPTEPST------------- 435
           + G+  L +   SP            P PSP      V P+ T   T             
Sbjct: 552 HDGESILPEFIPSPRFMPSPRRDDLTPAPSPYIRSASVPPLETSAGTQILQTPDLPSSIG 611

Query: 436 ---SMFATPGTI-DEGLGAEDLTLSDKQI--GTAD-EDLYFLEVDSS-PASKSRSQGTHG 446
              S+F TP TI +E L  E+  LSD      TA+ EDLYFLE DSS PA    SQGTH 
Sbjct: 612 FHESVFETPRTIFEEQLRPENTGLSDTPDLRNTAEAEDLYFLEADSSTPAGVPGSQGTHA 645

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BLAST of MELO3C023173 vs. TrEMBL
Match: A0A067L4S9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16714 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 6.4e-38
Identity = 151/489 (30.88%), Postives = 217/489 (44.38%), Query Frame = 1


Query: 9   VEIPSVFEDV-LNPGHERDNMPHSFLEVEVPDAMNVQDFGPSNK-----SISEGDGSPQN 68
           V++PS    V ++    +D  P++  E++   + + +D GPSN+     S+   D SP  
Sbjct: 215 VDLPSTQTTVPMDTAEIQDLGPNNQTELQT-GSPDFRDPGPSNQTEVINSMLNDDNSP-- 274

Query: 69  VPEMEIPREVVPGFSTKDVPIVSPPGGDVISEPPSPIDENINPDKLS--IIEDKMTPTKT 128
            PE+EI R+ V GFS + +P   P   +   +P +  D+ +N  ++     ED +     
Sbjct: 275 -PEIEIMRDPVQGFSPEKLPSGFPDHQNDAFQPTTSFDQGLNEKEIPSPFKEDALPSGGQ 334

Query: 129 SLPHEQSAGPPTSASPLEALIQPSVEHVLQPTPP-QQPRPRSRKRKQFFDKSTVLTNKFM 188
             P ++ +  P       +    S E  ++ TPP QQPRPR RKRK FFD+STVLTNKFM
Sbjct: 335 PSPFQRHSEAPEKFITDISFGNTSPELAIRSTPPVQQPRPRQRKRKHFFDESTVLTNKFM 394

Query: 189 KKALKDSSDLLRERRNIPSSSLEVWKLNNKLREKEVFHHPSITGLCHNLSDILNLNYIAT 248
           KKAL++S D+LR RR IPS++L +WKLNNKLR ++V + PS+TG   N+ ++   +YI T
Sbjct: 395 KKALENSGDILRRRREIPSTALGIWKLNNKLRREQVLYEPSLTGYSANICNLFKRDYIIT 454

Query: 249 KCRTISLEEALENFGDARNVASMSETLSGLVDTPPLAPEVASTPYTEIPTTVDSAGNIPS 308
           K       EA        + A  +E ++   D    AP       TE+         I +
Sbjct: 455 KSHLTLEREATPEPRVVTSPAPSTEAIAEARDANSPAPA------TEVV--------IEA 514

Query: 309 AGKTFLPPIVAPSPEVASSPQSGIPPTVNPASVSYSGMEIEHMCDAEGNRGDVTLGDLDA 368
             +   PPI    PE  S+         +P S +    EIE +   EG  G+  L D   
Sbjct: 515 RDRASPPPITEEIPEPTSAQ--------SPVSEAEPDPEIERLRHHEGQDGNRLLPD--- 574

Query: 369 SPERPMPSP-------------------RPSEGLVSPVPTEPSTSMFATPGTIDEGLGAE 428
           SP R MPSP                       G V    T   T +  TP     G+ A 
Sbjct: 575 SPARFMPSPGRFVSSPFRRDDFTPNTEKNLGSGSVPWAQTSIETEVMPTP-----GISAS 634

Query: 429 DLTLSDKQIGTADEDLYFLEVDSSPASKSR------------------------SQGTHG 446
             T + +     +    FLE    P    R                        SQGT  
Sbjct: 635 PGTCTTE----PETPRTFLEDQFDPGHTGRSDIPESIAETEDLHFLEADNTPAGSQGTQS 665

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BLAST of MELO3C023173 vs. TrEMBL
Match: W9R9I5_9ROSA (Sister chromatid cohesion 1 protein 3 OS=Morus notabilis GN=L484_013058 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.4e-37
Identity = 143/452 (31.64%), Postives = 221/452 (48.89%), Query Frame = 1


Query: 20  NPGHERDNMPHSFLEVEVPDAMNVQDFGPSNKSISEG-----DGSPQNVPEMEIPREVVP 79
           N  H  + +   F+  E PD + VQD G SN++         D SP+++ E+E+ R+  P
Sbjct: 208 NIKHTDETVLPDFVGHEAPDVV-VQDTGLSNQAEMHELRHSTDNSPEDILEVEVMRDAAP 267

Query: 80  GFSTKDVPIVSPPGGDVISEPPSPIDENINPDKL--SIIEDKMTPTKTSLPHEQSAGPPT 139
              +   P +SP   + I+EPP+ +D+ +N  +    IIE  +     +   + S+GP  
Sbjct: 268 --DSLGNPPLSPSRSNDIAEPPASLDQLMNEKETLSPIIETNLNSGGETPLFQPSSGPQA 327

Query: 140 SASPL-EALIQPSV--EHVLQPTPP-QQPRPRSRKRKQFFDKSTVLTNKFMKKALKDSSD 199
           S   L E L+  +V     ++ TP  ++P+P+ RKRKQ FD + VLTNKFMKKAL+D SD
Sbjct: 328 SVGSLREGLLNDNVPVSFAIRSTPQVEKPKPKPRKRKQCFDAAPVLTNKFMKKALEDPSD 387

Query: 200 LLRERRNIPSSSLEVWKLNNKLREKEVFHHPSITGLCHNLSDILNLNYIATKCRTISLEE 259
           L R++R IP S+L +WKL   LR+++ F  P  TG+C +L  I + +Y++TK +  SL+E
Sbjct: 388 LKRKKRKIPYSTLGIWKLEKNLRKEKGFSEPLFTGMCSDLRSIFDKDYMSTKLQ--SLKE 447

Query: 260 ALENFGDARNVASMSETL------------SGLVDTPPLAPEVASTPYTEIPTTVDSAGN 319
           A    G AR+ A  +E              + +  +P    E   TP  +    ++   +
Sbjct: 448 ASSGSGGARSPALETEAFPEAVVSQSPFPAASIEASPQHRGEQIQTPTHDYAQEIERLMD 507

Query: 320 IPSAGKTFLPPIVAPSPEVASSPQSGIPPTVNPASVSYSGMEIEHMCDAEGNRGDVTLGD 379
           +     + L  I+ PSP           P++    +S S  +I  +        + TLG 
Sbjct: 508 VSHDELSNLHDII-PSPRAT--------PSLGAHDISPSTTQI--LGSTPVTMAETTLGT 567

Query: 380 LDASPERPMPSPRPSEGLVSPVPTEPSTSMFATPGTIDEGLGAEDLTLS---DKQIGTAD 439
            +++     P P   + L S        S    P    E  G E+  LS   +       
Sbjct: 568 RESTGTGMFPMP---DFLTS---ARLGESDLEKPAFFYERNGQENARLSGVPELDSAAEA 627

Query: 440 EDLYFLEVDSSPASKSRSQGTHGVDSLSVRTR 446
           E+L+FLE D+S  + S SQGT GV SLSVRTR
Sbjct: 628 EELFFLEADNS--TPSGSQGTPGVGSLSVRTR 635

[Close]

BLAST of MELO3C023173 vs. TrEMBL
Match: B9RHH5_RICCO (Cohesin subunit rad21, putative OS=Ricinus communis GN=RCOM_1526820 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 9.3e-37
Identity = 149/471 (31.63%), Postives = 221/471 (46.92%), Query Frame = 1


Query: 25  RDNMPHSFLEVEVPDAMNVQDFGPSNKS--ISEGDGSPQNVPEMEIPREVVPGFSTKDVP 84
           ++  P +  E++    ++ Q+ GPSN++  ++    +    PE+E+ R+ V  FS++++P
Sbjct: 233 QETCPSNKTELQT-QTLDFQEPGPSNQTEVLNSAINNDNFPPEIEVLRDHVDVFSSENLP 292

Query: 85  IVSPPGGDVISEPPSPIDENINPDKLS--IIEDKMTPTKTSLPHEQSAGPPTSASPLEAL 144
            V     +  SEP   +D+ +N  K      ED +     S P +Q +  P SAS     
Sbjct: 293 PVFTHQQNDASEPNISLDQGLNEKKTPSPFKEDVIPSGGQSSPFQQRSESPNSASRDAPG 352

Query: 145 I--------QPSVEHVLQPTPP-QQPRPRSRKRKQFFDKSTVLTNKFMKKALKDSSDLLR 204
           I        + S E  ++ TP  QQPRPR+RKRK FFD++TVLTNKFMKKAL++S D+LR
Sbjct: 353 IFDSHISFGRVSPELAIRSTPAVQQPRPRTRKRKHFFDEATVLTNKFMKKALENSKDILR 412

Query: 205 ERRNIPSSSLEVWKLNNKLREKEVFHHPSITGLCHNLSDILNLNYIATKCRTISLEEALE 264
           +RR IPS++L +WKL N LR+++V   P +TG C +L ++L  +YI+ K   ++LE  + 
Sbjct: 413 KRREIPSTALGIWKLRNSLRKEQVLSEPLLTGSCADLCNLLK-DYISGKPH-LTLEREVT 472

Query: 265 NFGDARNVASMSETLSGLVDTPPLAPEVASTPYTEIPTTVDSAGNIPSAGKTFLPPIVAP 324
                   A   E +    D    A    +   +   T+  SA  + S  +T   P  AP
Sbjct: 473 PEPRVTTSAPAIEVIPEWRDATSPARSTVAILESIAATSPTSATEMISESRTTTSP--AP 532

Query: 325 SPEVASSPQSGIP--PTVNPASVSYSGMEIEHMCDAEGNRGDVTLGDLDASPERPMPSPR 384
           + E    P    P  P V P       +EIE +   EG+  ++ L +L  SP R  PSP 
Sbjct: 533 ATENIPEPMFAQPSVPEVEP------DLEIERLRQHEGHDANILLPELLPSPGRFPPSPF 592

Query: 385 PSEGLV--SPVPTEPSTSMFATPGTIDEGLGAEDLTLSDKQIGTADEDLY---------- 444
             +     S       T+ +A      E L   D+  S    GT   DL           
Sbjct: 593 RRDDFTPNSMKSLGSETAHWAGTSAGTEVLPTPDIAAS---TGTYTTDLETPRTFLEEQF 652

Query: 445 -----------------------FLEVDSSPASKSRSQGTHGVDSLSVRTR 446
                                  FLE D+SPA    S G+ G+DSLSVRTR
Sbjct: 653 DAGHTGLSDIPEFVNTAEAEDLYFLEADNSPAG---SPGSQGIDSLSVRTR 686

[Close]

BLAST of MELO3C023173 vs. TAIR10
Match: AT3G59550.1 (AT3G59550.1 Rad21/Rec8-like family protein)

HSP 1 Score: 146.4 bits (368), Expect = 4.5e-35
Identity = 136/429 (31.70%), Postives = 196/429 (45.69%), Query Frame = 1


Query: 27  NMPHSFLEVEVPDAMNVQDFGPSNKSISEGDGSPQNVPEMEIPREVVPGFSTKDVPIVSP 86
           N+   F EV+ P   N+ +    N   ++   SP  VPE+E  R+     S    P  + 
Sbjct: 215 NVTEEFTEVQDPRQSNLTEERIPNSERNDAT-SPGTVPEIERMRDAAHDLSPTSHPSFAA 274

Query: 87  PGGDVISEPPSPIDENINPDKLSI--IEDKMTPTKTSLPHEQSAGPPTSASPLEA----L 146
              DV  E    +DE +N  + +I  I+++M  +      E  +G P SA+  E      
Sbjct: 275 QQQDVRVERTESLDETLNEKEPTIPSIDEEMLNSGRHSAFELRSGSPGSAAGSEEERADF 334

Query: 147 IQPSVEHVLQPTPPQQPRPRSRKRKQFFDKSTVLTNKFMKKALKDSSDLLRERRNIPSSS 206
           + PS + VLQP+PP QP+ R+RKRK  FD  TVLTNK + + LKD SD LR+R+ +PSS 
Sbjct: 335 VHPSPQLVLQPSPPPQPQRRARKRKN-FDGVTVLTNKNISERLKDPSDTLRKRKKMPSSK 394

Query: 207 LEVWKLNNKLREKEVFHHPSITGLCHNLSDILNLNYIATKCRTISLEEALENFGDARNVA 266
           L+ W++NN+ R+ + F+ P  TG   +L ++   +Y+A+K      +E L         A
Sbjct: 395 LKFWRMNNQSRKDQNFNEPLFTGFSDDLRNVFEKDYVASKPHLAVSDETLP------EPA 454

Query: 267 SMSETLSGLVDTPPLAPEVAST---------PYTEIPTTVDSAGNIPSAGKTFLPPIVAP 326
           S+S T    V+  P++P   ST         P  +    +DSAG           P  A 
Sbjct: 455 SVSPTREAEVEINPVSPIPDSTNPDSTVQLSPAQQTEDVLDSAG-----------PRPAH 514

Query: 327 SPEVASSPQSGIPPTVNPASVSYSGMEIEHMCDAEGNRGDVTLGDLDASPERPMP----- 386
           +  VA+  QS       P +     M IEH+ D     G   +  + + P R  P     
Sbjct: 515 AESVATEAQS-------PRTFDNDDMGIEHLRD-----GGFPV-YMPSPPPRSSPFRTDD 574

Query: 387 -SPRPSEGLVSPVPTEPSTSMFATPGTIDEGL-GAEDLTLSDKQIGTADEDLYFLEV-DS 433
            + +          TEPSTS      T+ E L G  +L LS     T DE+LYFLEV  +
Sbjct: 575 FTTQSGNWETESYRTEPSTS------TVPEDLPGQRNLGLSPVSERT-DEELYFLEVGGN 604

[Close]

BLAST of MELO3C023173 vs. NCBI nr
Match: gi|659121743|ref|XP_008460792.1| (PREDICTED: sister chromatid cohesion 1 protein 3 [Cucumis melo])

HSP 1 Score: 896.3 bits (2315), Expect = 2.2e-257
Identity = 445/445 (100.00%), Postives = 445/445 (100.00%), Query Frame = 1


Query: 1   MIPPPHVDVEIPSVFEDVLNPGHERDNMPHSFLEVEVPDAMNVQDFGPSNKSISEGDGSP 60
           MIPPPHVDVEIPSVFEDVLNPGHERDNMPHSFLEVEVPDAMNVQDFGPSNKSISEGDGSP
Sbjct: 186 MIPPPHVDVEIPSVFEDVLNPGHERDNMPHSFLEVEVPDAMNVQDFGPSNKSISEGDGSP 245

Query: 61  QNVPEMEIPREVVPGFSTKDVPIVSPPGGDVISEPPSPIDENINPDKLSIIEDKMTPTKT 120
           QNVPEMEIPREVVPGFSTKDVPIVSPPGGDVISEPPSPIDENINPDKLSIIEDKMTPTKT
Sbjct: 246 QNVPEMEIPREVVPGFSTKDVPIVSPPGGDVISEPPSPIDENINPDKLSIIEDKMTPTKT 305

Query: 121 SLPHEQSAGPPTSASPLEALIQPSVEHVLQPTPPQQPRPRSRKRKQFFDKSTVLTNKFMK 180
           SLPHEQSAGPPTSASPLEALIQPSVEHVLQPTPPQQPRPRSRKRKQFFDKSTVLTNKFMK
Sbjct: 306 SLPHEQSAGPPTSASPLEALIQPSVEHVLQPTPPQQPRPRSRKRKQFFDKSTVLTNKFMK 365

Query: 181 KALKDSSDLLRERRNIPSSSLEVWKLNNKLREKEVFHHPSITGLCHNLSDILNLNYIATK 240
           KALKDSSDLLRERRNIPSSSLEVWKLNNKLREKEVFHHPSITGLCHNLSDILNLNYIATK
Sbjct: 366 KALKDSSDLLRERRNIPSSSLEVWKLNNKLREKEVFHHPSITGLCHNLSDILNLNYIATK 425

Query: 241 CRTISLEEALENFGDARNVASMSETLSGLVDTPPLAPEVASTPYTEIPTTVDSAGNIPSA 300
           CRTISLEEALENFGDARNVASMSETLSGLVDTPPLAPEVASTPYTEIPTTVDSAGNIPSA
Sbjct: 426 CRTISLEEALENFGDARNVASMSETLSGLVDTPPLAPEVASTPYTEIPTTVDSAGNIPSA 485

Query: 301 GKTFLPPIVAPSPEVASSPQSGIPPTVNPASVSYSGMEIEHMCDAEGNRGDVTLGDLDAS 360
           GKTFLPPIVAPSPEVASSPQSGIPPTVNPASVSYSGMEIEHMCDAEGNRGDVTLGDLDAS
Sbjct: 486 GKTFLPPIVAPSPEVASSPQSGIPPTVNPASVSYSGMEIEHMCDAEGNRGDVTLGDLDAS 545

Query: 361 PERPMPSPRPSEGLVSPVPTEPSTSMFATPGTIDEGLGAEDLTLSDKQIGTADEDLYFLE 420
           PERPMPSPRPSEGLVSPVPTEPSTSMFATPGTIDEGLGAEDLTLSDKQIGTADEDLYFLE
Sbjct: 546 PERPMPSPRPSEGLVSPVPTEPSTSMFATPGTIDEGLGAEDLTLSDKQIGTADEDLYFLE 605

Query: 421 VDSSPASKSRSQGTHGVDSLSVRTR 446
           VDSSPASKSRSQGTHGVDSLSVRTR
Sbjct: 606 VDSSPASKSRSQGTHGVDSLSVRTR 630

[Close]

BLAST of MELO3C023173 vs. NCBI nr
Match: gi|778692207|ref|XP_011653424.1| (PREDICTED: sister chromatid cohesion 1 protein 3 [Cucumis sativus])

HSP 1 Score: 781.9 bits (2018), Expect = 6.0e-223
Identity = 398/451 (88.25%), Postives = 416/451 (92.24%), Query Frame = 1


Query: 1   MIPPPHVD----VEIPSVFEDVLNPGHERDNMPHSFLEVEVPDAMNVQDFGPSNKSISEG 60
           MIPPPHVD    VE+PS FED+LN GH+ DNMPHSF EVEV DAMNVQDFGPSNK I E 
Sbjct: 186 MIPPPHVDITMDVEVPSDFEDILNTGHDGDNMPHSFPEVEVTDAMNVQDFGPSNKGIPED 245

Query: 61  DGSPQNVPEMEIPREVVPGFSTKDVPIVSPPGGDVISEPPSPIDENINPDKLSIIEDKMT 120
             SPQNVPEME+PR+V P FSTKDVPIVSPPGGDVISEPPSPIDENINPDKLSIIEDKMT
Sbjct: 246 VLSPQNVPEMEVPRDV-PVFSTKDVPIVSPPGGDVISEPPSPIDENINPDKLSIIEDKMT 305

Query: 121 PTKTSLPHEQSAGPPTSASPLEALIQPSVEHVLQPTPPQQPRPRSRKRKQFFDKSTVLTN 180
           PTKTSLPHEQSAGPPTSASP EALIQPSVEHVLQPTPPQQPRPRSRKRKQFFDKSTVLTN
Sbjct: 306 PTKTSLPHEQSAGPPTSASPPEALIQPSVEHVLQPTPPQQPRPRSRKRKQFFDKSTVLTN 365

Query: 181 KFMKKALKDSSDLLRERRNIPSSSLEVWKLNNKLREKEVFHHPSITGLCHNLSDILNLNY 240
           KFMKKAL+DSSDLLRERRNIPSSSLEVWKLNNKLREK+VFHHPSITGLCHNLSDI N++Y
Sbjct: 366 KFMKKALEDSSDLLRERRNIPSSSLEVWKLNNKLREKKVFHHPSITGLCHNLSDIFNVDY 425

Query: 241 IATKCRTISLEEALENFGDARNVASMSETLSGLVDTPPLAPEVASTPYTEIPTTVDSAGN 300
           IATKCRTISLEEALENFGDARNV S SETLSGL+  PPLAPEVASTPYTEIP++VD AGN
Sbjct: 426 IATKCRTISLEEALENFGDARNVTSTSETLSGLIYAPPLAPEVASTPYTEIPSSVDPAGN 485

Query: 301 IPSAGKTFLPPIVAPSPEVASSPQSGIPPTVNPASVSYSGMEIEHMCDAEGNRGDVTLGD 360
           IPSAG+TF+ P VAPSPEV+SSPQS IPPTVNPASVSYSG EIEH+ D EGNRGD T+GD
Sbjct: 486 IPSAGETFVLPTVAPSPEVSSSPQSRIPPTVNPASVSYSG-EIEHIRDVEGNRGDETMGD 545

Query: 361 LDASPERPMPSPRPSEGLVSPVP--TEPSTSMFATPGTIDEGLGAEDLTLSDKQIGTADE 420
           LDASPERPMPSPRPSEGLV+PVP  TEPSTSMF TPGTIDEGLGAEDLTLSDKQIGTADE
Sbjct: 546 LDASPERPMPSPRPSEGLVTPVPVSTEPSTSMFETPGTIDEGLGAEDLTLSDKQIGTADE 605

Query: 421 DLYFLEVDSSPASKSRSQGTHGVDSLSVRTR 446
           DLYFLEVDSSPA KSRSQGT GVDSLSVRTR
Sbjct: 606 DLYFLEVDSSPAGKSRSQGTRGVDSLSVRTR 634

[Close]

BLAST of MELO3C023173 vs. NCBI nr
Match: gi|596028090|ref|XP_007219331.1| (hypothetical protein PRUPE_ppa019289mg, partial [Prunus persica])

HSP 1 Score: 233.0 bits (593), Expect = 1.0e-57
Identity = 185/489 (37.83%), Postives = 251/489 (51.33%), Query Frame = 1


Query: 16  EDVLNPGHERDNMPH--------SFLEVEVPDAMNVQDFGPSNKSIS-----EGDGSPQN 75
           E   +PG++ D            +F EVEVP  +  +D  P+N+  S       DGSP++
Sbjct: 192 EGAPSPGNQTDEQIRFSDDFTLPNFPEVEVPQHVGFEDPVPTNQRESIDLRDRDDGSPEH 251

Query: 76  VPEMEIPREVVPGFSTKDVPIVSPPGGDVISEPPSPID-ENINPDKLSIIEDKMTPTKTS 135
           V EME+ R+ VP FS++ +P VSP   D ++EP   +D E    D LS I ++  P+   
Sbjct: 252 VQEMEVLRDAVPDFSSEILPPVSPNNRDDVTEPHRSVDPERSEKDILSPIMEETIPSGGP 311

Query: 136 LP-HEQSAGPPTSASPLEALIQPSVEHV---LQPTPP-QQPRPRSRKRKQFFDKSTVLTN 195
            P  + S+GPP S + L   +Q    HV   LQPTPP +QPR R RKRKQ+FD++ VL+N
Sbjct: 312 SPLFQPSSGPPASVASLPEGLQNIDTHVSFELQPTPPPEQPRARPRKRKQYFDETLVLSN 371

Query: 196 KFMKKALKDSSDLLRERRNIPSSSLEVWKLNNKLREKEVFHHPSITGLCHNLSDILNLNY 255
           +FM K ++D+SDLLR+RRNIP S+L VWKLNN LR++++F  PS++GLC +L +I N +Y
Sbjct: 372 EFMNKTIQDTSDLLRKRRNIPCSALGVWKLNNSLRKEQIFFQPSLSGLCSDLRNISNKDY 431

Query: 256 IATKCRTISLEEALENFGDARNVASMSETLSGLVDTPPLAPEVASTPYTEIPTTVDSAGN 315
           I+TK      EEAL +    R+ +  +E  S           VA +P    P T +    
Sbjct: 432 ISTKSHLF--EEALPDSRPTRSPSPTTEAFS--------EARVAQSPR---PFTTE---- 491

Query: 316 IPSAGKTFLPPIVAPSPEVASSPQSGIPPTVNPASVSYSGM---------EIEHMCDAEG 375
                       ++P  +VA S    +P  V  AS  Y G          EI+ +   E 
Sbjct: 492 ------------ISPERKVARS----LP--VTEASTEYRGAQSPATQCNPEIDQLRHVEE 551

Query: 376 NRGDVTLGDLDASPE----------RPMPSPRPSEGLVSPVPTEPST------------- 435
           + G+  L +   SP            P PSP      V P+ T   T             
Sbjct: 552 HDGESILPEFIPSPRFMPSPRRDDLTPAPSPYIRSASVPPLETSAGTQILQTPDLPSSIG 611

Query: 436 ---SMFATPGTI-DEGLGAEDLTLSDKQI--GTAD-EDLYFLEVDSS-PASKSRSQGTHG 446
              S+F TP TI +E L  E+  LSD      TA+ EDLYFLE DSS PA    SQGTH 
Sbjct: 612 FHESVFETPRTIFEEQLRPENTGLSDTPDLRNTAEAEDLYFLEADSSTPAGVPGSQGTHA 645

[Close]

BLAST of MELO3C023173 vs. NCBI nr
Match: gi|645250805|ref|XP_008231383.1| (PREDICTED: sister chromatid cohesion 1 protein 3 [Prunus mume])

HSP 1 Score: 232.3 bits (591), Expect = 1.8e-57
Identity = 188/489 (38.45%), Postives = 259/489 (52.97%), Query Frame = 1


Query: 16  EDVLNPGHERDNMPH--------SFLEVEVPDAMNVQDFGPSNKSIS-----EGDGSPQN 75
           E V +PG++ D            +F EVEVP  +  +D  P+N+  S       DGSP++
Sbjct: 188 EGVPSPGNQTDEQIRFSDDFTLPNFPEVEVPQHVGFEDPVPTNQRESIDLRHRDDGSPEH 247

Query: 76  VPEMEIPREVVPGFSTKDVPIVSPPGGDVISEPPSPID-ENINPDKLSIIEDKMTPTKTS 135
           V EME+ R+ VP FS++ +P VSP   D ++EP   +D E+   D LS I ++  P+   
Sbjct: 248 VQEMEVLRDAVPDFSSEILPPVSPSNRDDVTEPHRSVDPESSEKDILSPIMEETIPSGGP 307

Query: 136 LP-HEQSAGPPTSASPLEALIQPSVEHV---LQPTPP-QQPRPRSRKRKQFFDKSTVLTN 195
            P  + S+GPP S + L   +Q    HV   LQPTPP +QPR R RKRKQ+FD++ VL+N
Sbjct: 308 SPLFQPSSGPPASVASLPEGLQNIDTHVSFELQPTPPPEQPRARPRKRKQYFDETLVLSN 367

Query: 196 KFMKKALKDSSDLLRERRNIPSSSLEVWKLNNKLREKEVFHHPSITGLCHNLSDILNLNY 255
           +FM K ++D+SDLLR+RRNIP S+L VWKLNN LR++++F  PS++GLC +L +I N +Y
Sbjct: 368 EFMNKTIQDTSDLLRKRRNIPCSALGVWKLNNSLRKEQIFFQPSLSGLCSDLCNISNKDY 427

Query: 256 IATKCRTISLEEALENFGDARNVASMSETLSGLVDTPPLAPEVASTPYTEIPTTVDSAGN 315
           I+TK      EEAL +    R+ +  +E  S           VA +P    P T + +  
Sbjct: 428 ISTKSHL--FEEALPDSRPTRSPSPTTEAFS--------EARVAQSPR---PFTTEIS-- 487

Query: 316 IPSAGKTFLPPIVAPSPEV--ASSPQSGIPPTVNPASVSYSGMEIEHMCDAEGNRGDVTL 375
            P        P+   S E   A SP +   P ++         ++ H+   E + G+  L
Sbjct: 488 -PERRVARSLPVTEASTEYRGAQSPATQCNPEID---------QLRHV---EEHDGENIL 547

Query: 376 GDLDASPERPMPSPR-------PSEGL----VSPVPTEPST----------------SMF 435
            +   SP R MPSPR       PS  L    V P+ T   T                S+F
Sbjct: 548 PEFIPSP-RFMPSPRRDDLTPAPSPYLRSASVPPLETSTGTQILQTPDLPASIGFHESVF 607

Query: 436 ATPGTI-DEGLGAEDLTLSDKQ--IGTAD-EDLYFLEVDSSPASKSR-------SQGTHG 446
            TP TI +E LG E+  LSD      TA+ EDLYFLE DSS  + S+       SQGTH 
Sbjct: 608 ETPRTIFEEQLGPENTGLSDTPDLRNTAEAEDLYFLEADSSTPAGSQGTQGVPGSQGTHA 647

[Close]

BLAST of MELO3C023173 vs. NCBI nr
Match: gi|1009106161|ref|XP_015872687.1| (PREDICTED: sister chromatid cohesion 1 protein 3 [Ziziphus jujuba])

HSP 1 Score: 181.0 bits (458), Expect = 4.7e-42
Identity = 149/437 (34.10%), Postives = 221/437 (50.57%), Query Frame = 1


Query: 35  VEVPDAMNVQDFGPSNK-----SISEGDGSPQNVPEMEIPREVVPGFSTKDVPIVSPPGG 94
           VEVP  ++ Q   PSN      +    + SP++  E+E+ RE VP  S  ++P VSP   
Sbjct: 223 VEVPHDVSFQGPVPSNHEELFDTRHREENSPEDYQEIEVLREAVPDISPGNLPPVSPTCR 282

Query: 95  DVISEPPSPIDENINPDKL--SIIEDKMTPTKTSLPHEQSAGPPTSASPLEALIQ---PS 154
           + ISEP  PID  +N       ++E+ +T  + S     S  PPTSA+ L+  ++     
Sbjct: 283 NDISEPQEPIDIPMNEKGTLSPVMEENLTHERLSPHQPSSVPPPTSAASLQDGLEFNNSP 342

Query: 155 VEHVLQPTPP-QQPRPRSRKRKQFFDKSTVLTNKFMKKALKDSSDLLRERRNIPSSSLEV 214
           +   ++ TPP +QP+ R RKRKQ FD+S VLTNK+MKKAL++S DLLR+RRNIP S+L +
Sbjct: 343 LSFAIRSTPPVKQPKARPRKRKQCFDESPVLTNKYMKKALENSKDLLRKRRNIPCSALGI 402

Query: 215 WKLNNKLREKEVFHHPSITGLCHNLSDILNLNYIATKCRTISLEEALENFGDARNVASMS 274
           WKL N LR+ +V   PSITGL  +L +I + +Y+++K +   LEEA  +    R+ A ++
Sbjct: 403 WKLKNVLRKDQVLFQPSITGLSLDLCNIYDKDYVSSKLQL--LEEASPDTEVVRSPAPVT 462

Query: 275 ET--LSGLVDTPPLAP---------EVASTPYTEIPTTVDSAGNIPSAGKTFLPPIVAPS 334
           E     G+  +P  A          E +  P  +    ++   ++    +  + P   PS
Sbjct: 463 EAGLDPGVAQSPAHATEEIFPQQRGEESEGPVNDYDQEIEHLRHVEDRDERDVLPDFVPS 522

Query: 335 PEVASSPQSGIPPTVNPASVSYSGMEIEHMCDAEGNRGDVTLGDLDASPERPMPSPRPSE 394
           P +  +P  G        S       +E            T+G         +P+P    
Sbjct: 523 PRL--TPSHGREDHTPLTSQFLGSASVER-----------TIG------TGVLPTPD--- 582

Query: 395 GLVSPVPTEPSTSMFATPGT-IDEGLGAEDLTLSD--KQIGTAD-EDLYFLEVDSSPASK 446
               P  T    S   TP   + E LG E+  LSD  + + + D EDLYFLE D++  + 
Sbjct: 583 ---LPASTRLYESEIETPSAFLWEQLGVENTVLSDVPELVNSKDAEDLYFLEADNN--TP 630

The following BLAST results are available for this feature:

BLAST of MELO3C023173 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SCC13_ARATH	8.1e-34	31.70	Sister chromatid cohesion 1 protein 3 OS=Arabidopsis thaliana GN=SYN3 PE=2 SV=2	[more]

BLAST of MELO3C023173 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L109_CUCSA	4.2e-223	88.25	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G153290 PE=4 SV=1	[more]
M5XNA8_PRUPE	7.3e-58	37.83	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa019289mg PE=4 S...	[more]
A0A067L4S9_JATCU	6.4e-38	30.88	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16714 PE=4 SV=1	[more]
W9R9I5_9ROSA	1.4e-37	31.64	Sister chromatid cohesion 1 protein 3 OS=Morus notabilis GN=L484_013058 PE=4 SV=...	[more]
B9RHH5_RICCO	9.3e-37	31.63	Cohesin subunit rad21, putative OS=Ricinus communis GN=RCOM_1526820 PE=4 SV=1	[more]

BLAST of MELO3C023173 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G59550.1	4.5e-35	31.70	Rad21/Rec8-like family protein	[more]

BLAST of MELO3C023173 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659121743\|ref\|XP_008460792.1\|	2.2e-257	100.00	PREDICTED: sister chromatid cohesion 1 protein 3 [Cucumis melo]	[more]
gi\|778692207\|ref\|XP_011653424.1\|	6.0e-223	88.25	PREDICTED: sister chromatid cohesion 1 protein 3 [Cucumis sativus]	[more]
gi\|596028090\|ref\|XP_007219331.1\|	1.0e-57	37.83	hypothetical protein PRUPE_ppa019289mg, partial [Prunus persica]	[more]
gi\|645250805\|ref\|XP_008231383.1\|	1.8e-57	38.45	PREDICTED: sister chromatid cohesion 1 protein 3 [Prunus mume]	[more]
gi\|1009106161\|ref\|XP_015872687.1\|	4.7e-42	34.10	PREDICTED: sister chromatid cohesion 1 protein 3 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
biological_process	GO:0044699	single-organism process
cellular_component	GO:0000228	nuclear chromosome
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C023173T1	MELO3C023173T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR12585	SCC1 / RAD21 FAMILY MEMBER	coord: 41..445 score: 4.6
None	No IPR available	PANTHER	PTHR12585:SF36	SISTER CHROMATID COHESION 1 PROTEIN 3	coord: 41..445 score: 4.6

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C023173	Watermelon (97103) v2	mewmbB534
MELO3C023173	Wax gourd	mewgoB642
MELO3C023173	Wax gourd	mewgoB658
MELO3C023173	Cucumber (Gy14) v1	cgymeB011
MELO3C023173	Cucurbita maxima (Rimu)	cmameB613
MELO3C023173	Cucurbita maxima (Rimu)	cmameB808
MELO3C023173	Cucurbita maxima (Rimu)	cmameB810
MELO3C023173	Cucurbita moschata (Rifu)	cmomeB601
MELO3C023173	Cucurbita moschata (Rifu)	cmomeB792
MELO3C023173	Cucurbita moschata (Rifu)	cmomeB794
MELO3C023173	Wild cucumber (PI 183967)	cpimeB332
MELO3C023173	Cucumber (Chinese Long) v2	cumeB331
MELO3C023173	Watermelon (Charleston Gray)	mewcgB526
MELO3C023173	Watermelon (97103) v1	mewmB582
MELO3C023173	Watermelon (97103) v1	mewmB588
MELO3C023173	Cucurbita pepo (Zucchini)	cpemeB072
MELO3C023173	Cucurbita pepo (Zucchini)	cpemeB451
MELO3C023173	Bottle gourd (USVL1VR-Ls)	lsimeB152
MELO3C023173	Cucumber (Gy14) v2	cgybmeB287
MELO3C023173	Silver-seed gourd	carmeB0195
MELO3C023173	Silver-seed gourd	carmeB0288
MELO3C023173	Cucumber (Chinese Long) v3	cucmeB338