MELO3C023134 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C023134
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionCysteine sulfinic acid decarboxylase
Locationchr8 : 15292696 .. 15292923 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAGTTTGTCGCATGCCCCTAAGCATGTGTGGATAAAAGAGGAAGAGGTCACACTAGTGGAGTGTTTGGTGGAGTTGGTACCCGTAGTTGGATGGAAGTCAGACAACGGCACGTTCCAACCAGGTTATGTGGCCCAACTTGTCCGAATGATGACTGTAAAGTTTCCTGAATGTCTTGTCCAAGCCACTACTGTTGTAGACTGCCGAATAAAGACATTGAAGTGA

mRNA sequence

ATGGCAAGTTTGTCGCATGCCCCTAAGCATGTGTGGATAAAAGAGGAAGAGGTCACACTAGTGGAGTGTTTGGTGGAGTTGGTACCCGTAGTTGGATGGAAGTCAGACAACGGCACGTTCCAACCAGGTTATGTGGCCCAACTTGTCCGAATGATGACTGTAAAGTTTCCTGAATGTCTTGTCCAAGCCACTACTGTTGTAGACTGCCGAATAAAGACATTGAAGTGA

Coding sequence (CDS)

ATGGCAAGTTTGTCGCATGCCCCTAAGCATGTGTGGATAAAAGAGGAAGAGGTCACACTAGTGGAGTGTTTGGTGGAGTTGGTACCCGTAGTTGGATGGAAGTCAGACAACGGCACGTTCCAACCAGGTTATGTGGCCCAACTTGTCCGAATGATGACTGTAAAGTTTCCTGAATGTCTTGTCCAAGCCACTACTGTTGTAGACTGCCGAATAAAGACATTGAAGTGA

Protein sequence

MASLSHAPKHVWIKEEEVTLVECLVELVPVVGWKSDNGTFQPGYVAQLVRMMTVKFPECLVQATTVVDCRIKTLK*
Homology
[Close]
BLAST of MELO3C023134 vs. TrEMBL
Match: E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 4.3e-16
Identity = 45/75 (60.00%), Postives = 52/75 (69.33%), Query Frame = 1 

Query: 1   MASLSHAPKHVWIKEEEVTLVECLVELVPVVGWKSDNGTFQPGYVAQLVRMMTVKFPECL 60
           M S S  PKH W KEEE  LVECLVELV   GW+SDNGTF+PGY+ QL RMM  K P   
Sbjct: 356 MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSN 415

Query: 61  VQATTVVDCRIKTLK 76
           + A+T +D RIK +K
Sbjct: 416 IHAST-IDSRIKLMK 429

[Close]
BLAST of MELO3C023134 vs. TrEMBL
Match: E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 3.4e-13
Identity = 38/53 (71.70%), Postives = 44/53 (83.02%), Query Frame = 1 

Query: 23  CLVELVPVVGWKSDNGTFQPGYVAQLVRMMTVKFPECLVQATTVVDCRIKTLK 76
           C +ELV + GWKSDNGTF+PGY+AQLVRMM  K   C V+ATTV+DCRIKTLK
Sbjct: 340 CGMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLSGCQVRATTVIDCRIKTLK 392

[Close]
BLAST of MELO3C023134 vs. TrEMBL
Match: E5GBS5_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 5.7e-13
Identity = 43/75 (57.33%), Postives = 52/75 (69.33%), Query Frame = 1 

Query: 1  MASLSHAPKHVWIKEEEVTLVECLVELVPVVGWKSDNGTFQPGYVAQLVRMMTVKFPECL 60
          MAS S   KH+WIKE++ TLVECLV+LV   GW SDNGTF  GY +QL RMM  K     
Sbjct: 1  MASSSRDLKHLWIKEKDATLVECLVKLVNSSGWWSDNGTFGLGYYSQLTRMMAQKMSGPN 60

Query: 61 VQATTVVDCRIKTLK 76
          +QATT+  C IKT++
Sbjct: 61 IQATTIDSC-IKTME 74

[Close]
BLAST of MELO3C023134 vs. TrEMBL
Match: A0A0A9TMG5_ARUDO (Uncharacterized protein OS=Arundo donax PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 4.7e-07
Identity = 30/72 (41.67%), Postives = 43/72 (59.72%), Query Frame = 1 

Query: 4  LSHAPKHVWIKEEEVTLVECLVELVPVVGWKSDNGTFQPGYVAQLVRMMTVKFPECLVQA 63
          L+  PKH W + E+  LV CLV L+    WK++NG F  GY+AQL + +  + P C  + 
Sbjct: 12 LNKNPKHQWSQHEDEHLVHCLVRLIQEGSWKAENG-FCTGYLAQLEKWLHERIPTCEFKG 71

Query: 64 TTVVDCRIKTLK 76
             +D R+KTLK
Sbjct: 72 NPHIDSRLKTLK 82

[Close]
BLAST of MELO3C023134 vs. TrEMBL
Match: A0A072UYX1_MEDTR (Myb/SANT-like DNA-binding domain protein OS=Medicago truncatula GN=MTR_3g075160 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 8.0e-07
Identity = 29/67 (43.28%), Postives = 42/67 (62.69%), Query Frame = 1 

Query: 9  KHVWIKEEEVTLVECLVELVPVVGWKSDNGTFQPGYVAQLVRMMTVKFPECLVQATTVVD 68
          K  W  EE+  LV+ L++LV   GWK+D GTF+PGY   L R +  K P+C ++A   ++
Sbjct: 14 KRQWTTEEDAVLVQGLLQLVDD-GWKADAGTFKPGYTKVLERYLLKKIPDCTLKANPHIE 73

Query: 69 CRIKTLK 76
           R+K LK
Sbjct: 74 SRVKRLK 79

[Close]
BLAST of MELO3C023134 vs. NCBI nr
Match: gi|659082641|ref|XP_008441954.1| (PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo])

HSP 1 Score: 104.0 bits (258), Expect = 1.2e-19
Identity = 48/75 (64.00%), Postives = 56/75 (74.67%), Query Frame = 1 

Query: 1  MASLSHAPKHVWIKEEEVTLVECLVELVPVVGWKSDNGTFQPGYVAQLVRMMTVKFPECL 60
          MASLS APKH W KEEE   VECLVELV   GW+SDNGTFQPGY+AQL RMM  K P   
Sbjct: 1  MASLSRAPKHTWTKEEEEKFVECLVELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTN 60

Query: 61 VQATTVVDCRIKTLK 76
          +Q ++ +DC +K+LK
Sbjct: 61 IQESSTIDCHVKSLK 75

[Close]
BLAST of MELO3C023134 vs. NCBI nr
Match: gi|659133698|ref|XP_008466863.1| (PREDICTED: uncharacterized protein LOC103504172 [Cucumis melo])

HSP 1 Score: 95.5 bits (236), Expect = 4.2e-17
Identity = 46/75 (61.33%), Postives = 53/75 (70.67%), Query Frame = 1 

Query: 1   MASLSHAPKHVWIKEEEVTLVECLVELVPVVGWKSDNGTFQPGYVAQLVRMMTVKFPECL 60
           M S S  PKH W KEEE  LVECLVELV   GW+SDNGTF+PGY+ QL RMM  K P C 
Sbjct: 209 MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGCN 268

Query: 61  VQATTVVDCRIKTLK 76
           + A+T +D RIK +K
Sbjct: 269 IHAST-IDSRIKLMK 282

[Close]
BLAST of MELO3C023134 vs. NCBI nr
Match: gi|659100589|ref|XP_008451169.1| (PREDICTED: uncharacterized protein LOC103492547 [Cucumis melo])

HSP 1 Score: 95.1 bits (235), Expect = 5.5e-17
Identity = 46/75 (61.33%), Postives = 53/75 (70.67%), Query Frame = 1 

Query: 1   MASLSHAPKHVWIKEEEVTLVECLVELVPVVGWKSDNGTFQPGYVAQLVRMMTVKFPECL 60
           M S S  PKH W KEEE  L+ECLVELV V GW+SDNGTF+PGY+ QL RMM  K P C 
Sbjct: 218 MTSSSRLPKHSWTKEEEAGLIECLVELVNVGGWRSDNGTFRPGYLNQLARMMAFKIPGCN 277

Query: 61  VQATTVVDCRIKTLK 76
           + A T +D RIK +K
Sbjct: 278 IHALT-IDSRIKLMK 291

[Close]
BLAST of MELO3C023134 vs. NCBI nr
Match: gi|307136287|gb|ADN34114.1| (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 91.7 bits (226), Expect = 6.1e-16
Identity = 45/75 (60.00%), Postives = 52/75 (69.33%), Query Frame = 1 

Query: 1   MASLSHAPKHVWIKEEEVTLVECLVELVPVVGWKSDNGTFQPGYVAQLVRMMTVKFPECL 60
           M S S  PKH W KEEE  LVECLVELV   GW+SDNGTF+PGY+ QL RMM  K P   
Sbjct: 356 MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSN 415

Query: 61  VQATTVVDCRIKTLK 76
           + A+T +D RIK +K
Sbjct: 416 IHAST-IDSRIKLMK 429

[Close]
BLAST of MELO3C023134 vs. NCBI nr
Match: gi|659113923|ref|XP_008456820.1| (PREDICTED: uncharacterized protein LOC103496659 [Cucumis melo])

HSP 1 Score: 91.3 bits (225), Expect = 8.0e-16
Identity = 42/70 (60.00%), Postives = 49/70 (70.00%), Query Frame = 1 

Query: 1  MASLSHAPKHVWIKEEEVTLVECLVELVPVVGWKSDNGTFQPGYVAQLVRMMTVKFPECL 60
          MAS S A KH W KEEE  LVECLVELV   GW+SDNGTF+ GY+ QL RMM  K P+  
Sbjct: 1  MASSSRATKHAWTKEEEAKLVECLVELVSAGGWRSDNGTFRHGYLTQLQRMMAEKLPDTN 60

Query: 61 VQATTVVDCR 71
          +Q +  +DCR
Sbjct: 61 IQGSPTIDCR 70

The following BLAST results are available for this feature:
BLAST of MELO3C023134 vs. TrEMBL
Match NameE-valueIdentityDescription
E5GCB5_CUCME4.3e-1660.00Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
E5GBB2_CUCME3.4e-1371.70Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
E5GBS5_CUCME5.7e-1357.33Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A9TMG5_ARUDO4.7e-0741.67Uncharacterized protein OS=Arundo donax PE=4 SV=1[more]
A0A072UYX1_MEDTR8.0e-0743.28Myb/SANT-like DNA-binding domain protein OS=Medicago truncatula GN=MTR_3g075160 ... [more]
BLAST of MELO3C023134 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659082641|ref|XP_008441954.1|1.2e-1964.00PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo][more]
gi|659133698|ref|XP_008466863.1|4.2e-1761.33PREDICTED: uncharacterized protein LOC103504172 [Cucumis melo][more]
gi|659100589|ref|XP_008451169.1|5.5e-1761.33PREDICTED: uncharacterized protein LOC103492547 [Cucumis melo][more]
gi|307136287|gb|ADN34114.1|6.1e-1660.00retrotransposon protein [Cucumis melo subsp. melo][more]
gi|659113923|ref|XP_008456820.1|8.0e-1660.00PREDICTED: uncharacterized protein LOC103496659 [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C023134T1MELO3C023134T1mRNA