MELO3C023130 (gene) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTCTCTCTACTTCTTCTTCCTTCCAATGTTCTTTTTCCGCCACTCCAAACACCGATCACTTCCTCATTTGTCGATTTGGGTATTCCAGCCGTCTCATCATTGTAGATCAAATACTGCAACAGACTCCCTCAATCCTCATGGGGGAAACTCTGATTCCTTTCTCTAATCTCTGGCATCCTGAACAACAACAATCAATTGAGTTTTTGGTTAATGAGTTTCTGGGTTCATTCAACCTCCATTCCTTTGCTTCTGCCCGCCGAACCATTTGTCGTAAGATTCTCTCCTTTGCTCTACAGTTTCATAACGTTCATGGGAGCTTCAAAATAGAAGCCAACGTCGAGCATGTGGAGGACTTGATCATCGGAGAGCAAGGATTTCAAGAAACTCCTTCCCCGCCAAGGACAACAGGGGCGCCGGAGTCTGCGATTGAGAGACTAAGGAAGGAGAAATTTGATGTATTAAATAAAGAAGAAGAAATTGGAGATTGCAGTGTTTGTTATGAAGAGCTGAAAGGACAAGGGAAGGAGGTGAGTAGGATACCATGTGGTCATGTGTATCACAAATCATGCATTCTCACTTGGCTTCAAATCAACAACTCTTGCCCACTGTGTAGAGCACCATTACAACCATGAACACTTTCTTCATTTTGCTTTTGAGAATTATCTTAATTCTCTTCCATTTTTTTTATTCTTTTAGAATTCTTATGCAAATGTAATTTTGTGCTCTCTTCCTTTCCAATGTAAGTTGGTACAAATATATATTTTGTCTAACTATTGATTGATACAGATTTGGGAG ATGTCTCTCTCTACTTCTTCTTCCTTCCAATGTTCTTTTTCCGCCACTCCAAACACCGATCACTTCCTCATTTGTCGATTTGGGTATTCCAGCCGTCTCATCATTGTAGATCAAATACTGCAACAGACTCCCTCAATCCTCATGGGGGAAACTCTGATTCCTTTCTCTAATCTCTGGCATCCTGAACAACAACAATCAATTGAGTTTTTGGTTAATGAGTTTCTGGGTTCATTCAACCTCCATTCCTTTGCTTCTGCCCGCCGAACCATTTGTCGTAAGATTCTCTCCTTTGCTCTACAGTTTCATAACGTTCATGGGAGCTTCAAAATAGAAGCCAACGTCGAGCATGTGGAGGACTTGATCATCGGAGAGCAAGGATTTCAAGAAACTCCTTCCCCGCCAAGGACAACAGGGGCGCCGGAGTCTGCGATTGAGAGACTAAGGAAGGAGAAATTTGATGTATTAAATAAAGAAGAAGAAATTGGAGATTGCAGTGTTTGTTATGAAGAGCTGAAAGGACAAGGGAAGGAGGTGAGTAGGATACCATGTGGTCATGTGTATCACAAATCATGCATTCTCACTTGGCTTCAAATCAACAACTCTTGCCCACTGTGTAGAGCACCATTACAACCATGAACACTTTCTTCATTTTGCTTTTGAGAATTATCTTAATTCTCTTCCATTTTTTTTATTCTTTTAGAATTCTTATGCAAATGTAATTTTGTGCTCTCTTCCTTTCCAATGTAAGTTGGTACAAATATATATTTTGTCTAACTATTGATTGATACAGATTTGGGAG ATGTCTCTCTCTACTTCTTCTTCCTTCCAATGTTCTTTTTCCGCCACTCCAAACACCGATCACTTCCTCATTTGTCGATTTGGGTATTCCAGCCGTCTCATCATTGTAGATCAAATACTGCAACAGACTCCCTCAATCCTCATGGGGGAAACTCTGATTCCTTTCTCTAATCTCTGGCATCCTGAACAACAACAATCAATTGAGTTTTTGGTTAATGAGTTTCTGGGTTCATTCAACCTCCATTCCTTTGCTTCTGCCCGCCGAACCATTTGTCGTAAGATTCTCTCCTTTGCTCTACAGTTTCATAACGTTCATGGGAGCTTCAAAATAGAAGCCAACGTCGAGCATGTGGAGGACTTGATCATCGGAGAGCAAGGATTTCAAGAAACTCCTTCCCCGCCAAGGACAACAGGGGCGCCGGAGTCTGCGATTGAGAGACTAAGGAAGGAGAAATTTGATGTATTAAATAAAGAAGAAGAAATTGGAGATTGCAGTGTTTGTTATGAAGAGCTGAAAGGACAAGGGAAGGAGGTGAGTAGGATACCATGTGGTCATGTGTATCACAAATCATGCATTCTCACTTGGCTTCAAATCAACAACTCTTGCCCACTGTGTAGAGCACCATTACAACCATGA MSLSTSSSFQCSFSATPNTDHFLICRFGYSSRLIIVDQILQQTPSILMGETLIPFSNLWHPEQQQSIEFLVNEFLGSFNLHSFASARRTICRKILSFALQFHNVHGSFKIEANVEHVEDLIIGEQGFQETPSPPRTTGAPESAIERLRKEKFDVLNKEEEIGDCSVCYEELKGQGKEVSRIPCGHVYHKSCILTWLQINNSCPLCRAPLQP*
BLAST of MELO3C023130 vs. Swiss-Prot
Match: RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 7.9e-13 Identity = 41/121 (33.88%), Postives = 63/121 (52.07%), Query Frame = 1
BLAST of MELO3C023130 vs. Swiss-Prot
Match: RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 5.7e-11 Identity = 35/93 (37.63%), Postives = 54/93 (58.06%), Query Frame = 1
BLAST of MELO3C023130 vs. Swiss-Prot
Match: YKW3_SCHPO (Uncharacterized RING finger protein P32A8.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAP32A8.03c PE=3 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.8e-09 Identity = 28/73 (38.36%), Postives = 45/73 (61.64%), Query Frame = 1
BLAST of MELO3C023130 vs. Swiss-Prot
Match: RHC1A_ARATH (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana GN=RHC1A PE=2 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 3.1e-09 Identity = 29/71 (40.85%), Postives = 38/71 (53.52%), Query Frame = 1
BLAST of MELO3C023130 vs. Swiss-Prot
Match: ATL5_ARATH (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 5.3e-09 Identity = 27/70 (38.57%), Postives = 38/70 (54.29%), Query Frame = 1
BLAST of MELO3C023130 vs. TrEMBL
Match: A0A0A0LHS2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G130680 PE=4 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 1.4e-53 Identity = 124/233 (53.22%), Postives = 151/233 (64.81%), Query Frame = 1
BLAST of MELO3C023130 vs. TrEMBL
Match: A0A0A0L1B0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G539600 PE=4 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 1.8e-32 Identity = 78/111 (70.27%), Postives = 86/111 (77.48%), Query Frame = 1
BLAST of MELO3C023130 vs. TrEMBL
Match: A0A0A0LRB0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G432790 PE=4 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 3.6e-28 Identity = 91/225 (40.44%), Postives = 124/225 (55.11%), Query Frame = 1
BLAST of MELO3C023130 vs. TrEMBL
Match: A0A0A0L3Z2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G551140 PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 4.6e-28 Identity = 96/235 (40.85%), Postives = 128/235 (54.47%), Query Frame = 1
BLAST of MELO3C023130 vs. TrEMBL
Match: A0A0A0LHI3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G889100 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 2.5e-21 Identity = 83/218 (38.07%), Postives = 115/218 (52.75%), Query Frame = 1
BLAST of MELO3C023130 vs. TAIR10
Match: AT1G60360.1 (AT1G60360.1 RING/U-box superfamily protein) HSP 1 Score: 69.3 bits (168), Expect = 3.2e-12 Identity = 36/107 (33.64%), Postives = 55/107 (51.40%), Query Frame = 1
BLAST of MELO3C023130 vs. TAIR10
Match: AT3G19950.1 (AT3G19950.1 RING/U-box superfamily protein) HSP 1 Score: 69.3 bits (168), Expect = 3.2e-12 Identity = 35/93 (37.63%), Postives = 54/93 (58.06%), Query Frame = 1
BLAST of MELO3C023130 vs. TAIR10
Match: AT5G60820.1 (AT5G60820.1 RING/U-box superfamily protein) HSP 1 Score: 63.9 bits (154), Expect = 1.3e-10 Identity = 27/57 (47.37%), Postives = 36/57 (63.16%), Query Frame = 1
BLAST of MELO3C023130 vs. TAIR10
Match: AT5G24870.1 (AT5G24870.1 RING/U-box superfamily protein) HSP 1 Score: 63.5 bits (153), Expect = 1.8e-10 Identity = 38/110 (34.55%), Postives = 58/110 (52.73%), Query Frame = 1
BLAST of MELO3C023130 vs. TAIR10
Match: AT2G40830.2 (AT2G40830.2 RING-H2 finger C1A) HSP 1 Score: 63.5 bits (153), Expect = 1.8e-10 Identity = 29/71 (40.85%), Postives = 38/71 (53.52%), Query Frame = 1
BLAST of MELO3C023130 vs. NCBI nr
Match: gi|659121671|ref|XP_008460768.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo]) HSP 1 Score: 435.6 bits (1119), Expect = 4.8e-119 Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 1
BLAST of MELO3C023130 vs. NCBI nr
Match: gi|659083325|ref|XP_008442291.1| (PREDICTED: RING finger protein 165-like [Cucumis melo]) HSP 1 Score: 268.9 bits (686), Expect = 7.8e-69 Identity = 136/166 (81.93%), Postives = 147/166 (88.55%), Query Frame = 1
BLAST of MELO3C023130 vs. NCBI nr
Match: gi|449442467|ref|XP_004139003.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]) HSP 1 Score: 217.6 bits (553), Expect = 2.1e-53 Identity = 124/233 (53.22%), Postives = 151/233 (64.81%), Query Frame = 1
BLAST of MELO3C023130 vs. NCBI nr
Match: gi|659114890|ref|XP_008457277.1| (PREDICTED: RING finger protein 165-like [Cucumis melo]) HSP 1 Score: 213.4 bits (542), Expect = 3.9e-52 Identity = 125/233 (53.65%), Postives = 150/233 (64.38%), Query Frame = 1
BLAST of MELO3C023130 vs. NCBI nr
Match: gi|700199686|gb|KGN54844.1| (hypothetical protein Csa_4G539600 [Cucumis sativus]) HSP 1 Score: 147.5 bits (371), Expect = 2.6e-32 Identity = 78/111 (70.27%), Postives = 86/111 (77.48%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |