MELO3C023122 (gene) Melon (DHL92) v3.5.1

NameMELO3C023122
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionPhage capsid scaffolding protein (GPO) serine peptidase
Locationchr8 : 15058880 .. 15059191 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGGGCGAGAAGAGCTCCAAAGTAAAGTAGATAAGGTAGCTCTCTCCACGGAGAAGAGAAAAAGAAAAGGAAAAGAAAAGATCTCCAAGGAGTTTTACGAAGAGGTGGAAAAAGAAGTTGAAGAGTTAAGTCCTTTGGAGGACGAAGTGCCAAAGCCTATGAAAAAAAGGAAATTTATAATGAAAAAGAAGGCTTTGAGGGAACAATTTAGAAAGAGGCGAGAAGAGAAAGAAAGAAGCAAGATTGAAAAAGACAAGGGCAAACTGATGAAAGCGGGATGGATGAGCTCTTCTTTGCAAAGAGAGTGA

mRNA sequence

ATGAAGGGGCGAGAAGAGCTCCAAAGTAAAGTAGATAAGGTAGCTCTCTCCACGGAGAAGAGAAAAAGAAAAGGAAAAGAAAAGATCTCCAAGGAGTTTTACGAAGAGGTGGAAAAAGAAGTTGAAGAGTTAAGTCCTTTGGAGGACGAAGTGCCAAAGCCTATGAAAAAAAGGAAATTTATAATGAAAAAGAAGGCTTTGAGGGAACAATTTAGAAAGAGGCGAGAAGAGAAAGAAAGAAGCAAGATTGAAAAAGACAAGGGCAAACTGATGAAAGCGGGATGGATGAGCTCTTCTTTGCAAAGAGAGTGA

Coding sequence (CDS)

ATGAAGGGGCGAGAAGAGCTCCAAAGTAAAGTAGATAAGGTAGCTCTCTCCACGGAGAAGAGAAAAAGAAAAGGAAAAGAAAAGATCTCCAAGGAGTTTTACGAAGAGGTGGAAAAAGAAGTTGAAGAGTTAAGTCCTTTGGAGGACGAAGTGCCAAAGCCTATGAAAAAAAGGAAATTTATAATGAAAAAGAAGGCTTTGAGGGAACAATTTAGAAAGAGGCGAGAAGAGAAAGAAAGAAGCAAGATTGAAAAAGACAAGGGCAAACTGATGAAAGCGGGATGGATGAGCTCTTCTTTGCAAAGAGAGTGA

Protein sequence

MKGREELQSKVDKVALSTEKRKRKGKEKISKEFYEEVEKEVEELSPLEDEVPKPMKKRKFIMKKKALREQFRKRREEKERSKIEKDKGKLMKAGWMSSSLQRE*
BLAST of MELO3C023122 vs. TrEMBL
Match: A0A0A0K7W9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G290550 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 4.3e-11
Identity = 40/82 (48.78%), Postives = 61/82 (74.39%), Query Frame = 1

Query: 1  MKGREELQSKVDKVALSTEKRKRKGKEKISKEFYEEVEKEVEELSPLEDEVPKPMKKRKF 60
          ++ ++EL +K+D+  +ST  +K K ++  S+E  EE E+++E+LSPLEDEV KP+KK K 
Sbjct: 17 LREQKELLNKIDQAPIST--KKGKVRKTPSEEICEEFERKLEDLSPLEDEVVKPLKK-KV 76

Query: 61 IMKKKALREQFRKRREEKERSK 83
           +KK  L++QF KRREEKE+ K
Sbjct: 77 TVKKSVLKKQFDKRREEKEKKK 95

BLAST of MELO3C023122 vs. TrEMBL
Match: A0A0A0LNF9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G145900 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 9.0e-09
Identity = 38/82 (46.34%), Postives = 52/82 (63.41%), Query Frame = 1

Query: 5   EELQSKVDKVALSTEKRKRKGKEKISKEFYEEVEKEVEELSPLEDEVPKPMKKRKFIMKK 64
           EEL SK D+VALS EK K K KEK  +E  EE+EKE+  +S LE+E P+  +KR   + K
Sbjct: 30  EELHSKDDEVALSVEKDKEKEKEKGDQEIAEELEKEIGHMSSLEEEAPR-RQKRISKVSK 89

Query: 65  KALREQFRKRREEKERSKIEKD 87
             L  Q   RR+ K++  ++KD
Sbjct: 90  NFLHAQVEMRRKAKDKEALQKD 110

BLAST of MELO3C023122 vs. TrEMBL
Match: A0A0A0K4R7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G298750 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 5.5e-06
Identity = 26/44 (59.09%), Postives = 36/44 (81.82%), Query Frame = 1

Query: 31 KEFYEEVEKEVEELSPLEDEVPKPMKKRKFIMKKKALREQFRKR 75
          +E +EE E+++E+LSPLEDEV KP+KK+K  + KK L+EQF KR
Sbjct: 6  EEIFEEFERKLEDLSPLEDEVVKPLKKKKVTVNKKVLKEQFVKR 49

BLAST of MELO3C023122 vs. NCBI nr
Match: gi|659083323|ref|XP_008442290.1| (PREDICTED: stress response protein NST1-like [Cucumis melo])

HSP 1 Score: 91.7 bits (226), Expect = 8.4e-16
Identity = 52/97 (53.61%), Postives = 66/97 (68.04%), Query Frame = 1

Query: 5   EELQSKVDKVALSTEKRKRKGKEKISKEFYEEVEKEVEELSPLEDE-VPKPMKKRKFIMK 64
           EEL +KVDK+ALS EK K K  EK  +EFY+E EKE++E SPLED  V +P KKR   MK
Sbjct: 50  EELLNKVDKLALSVEKGKEK--EKTFEEFYKEFEKEIDEFSPLEDNVVERPAKKRNVTMK 109

Query: 65  KKALREQFRKRREEKERSKIEKDKGKLMKAGWMSSSL 101
           KK LR+QF KRR+EK+R   +K+  K ++      SL
Sbjct: 110 KKVLRDQFAKRRKEKKRRGPQKESEKEVERSEKEGSL 144

BLAST of MELO3C023122 vs. NCBI nr
Match: gi|659090014|ref|XP_008445787.1| (PREDICTED: axoneme-associated protein mst101(3)-like [Cucumis melo])

HSP 1 Score: 87.0 bits (214), Expect = 2.1e-14
Identity = 48/86 (55.81%), Postives = 62/86 (72.09%), Query Frame = 1

Query: 1   MKGREELQSKVDKVALSTEKRKRKGKEKISKEFYEEVEKEVEELSPLEDEVPKPMKKRKF 60
           ++ REEL  KVD VALS EK K +  EK  +  YEE EKE+++L PLE++V +P KKR F
Sbjct: 98  LREREELLGKVDNVALSAEKDKCE--EKNFEVHYEEFEKEIDKLCPLEEKVIRPAKKRTF 157

Query: 61  IMKKKALREQFRKRREEKERSKIEKD 87
            MKKKALR+QF KRR E+ + K +KD
Sbjct: 158 TMKKKALRKQFAKRRVEEMKRKPKKD 181

BLAST of MELO3C023122 vs. NCBI nr
Match: gi|700189199|gb|KGN44432.1| (hypothetical protein Csa_7G290550 [Cucumis sativus])

HSP 1 Score: 75.5 bits (184), Expect = 6.2e-11
Identity = 40/82 (48.78%), Postives = 61/82 (74.39%), Query Frame = 1

Query: 1  MKGREELQSKVDKVALSTEKRKRKGKEKISKEFYEEVEKEVEELSPLEDEVPKPMKKRKF 60
          ++ ++EL +K+D+  +ST  +K K ++  S+E  EE E+++E+LSPLEDEV KP+KK K 
Sbjct: 17 LREQKELLNKIDQAPIST--KKGKVRKTPSEEICEEFERKLEDLSPLEDEVVKPLKK-KV 76

Query: 61 IMKKKALREQFRKRREEKERSK 83
           +KK  L++QF KRREEKE+ K
Sbjct: 77 TVKKSVLKKQFDKRREEKEKKK 95

BLAST of MELO3C023122 vs. NCBI nr
Match: gi|659130998|ref|XP_008465464.1| (PREDICTED: DNA ligase 1-like [Cucumis melo])

HSP 1 Score: 72.0 bits (175), Expect = 6.8e-10
Identity = 41/89 (46.07%), Postives = 63/89 (70.79%), Query Frame = 1

Query: 1   MKGREELQSKVDKVALSTEKRKRKGKEKISKEFYEEVEKEVEELSPLEDEVPKPMKKRKF 60
           ++ +EEL +KVDKVALS EKRK   +EK  +E  EE +KE+EELSPLEDEV +   K+K 
Sbjct: 66  LREKEELLNKVDKVALSVEKRK---EEKTFEEHCEEFKKEIEELSPLEDEVVEKSSKKKR 125

Query: 61  IMKKKALREQFRKRREEKERSKIEKDKGK 90
           IM+ +   ++ ++++E+K + + E  +GK
Sbjct: 126 IMEGQ--DDKRKEKKEKKAQQEEESQEGK 149

BLAST of MELO3C023122 vs. NCBI nr
Match: gi|700206372|gb|KGN61491.1| (hypothetical protein Csa_2G145900 [Cucumis sativus])

HSP 1 Score: 67.8 bits (164), Expect = 1.3e-08
Identity = 38/82 (46.34%), Postives = 52/82 (63.41%), Query Frame = 1

Query: 5   EELQSKVDKVALSTEKRKRKGKEKISKEFYEEVEKEVEELSPLEDEVPKPMKKRKFIMKK 64
           EEL SK D+VALS EK K K KEK  +E  EE+EKE+  +S LE+E P+  +KR   + K
Sbjct: 30  EELHSKDDEVALSVEKDKEKEKEKGDQEIAEELEKEIGHMSSLEEEAPR-RQKRISKVSK 89

Query: 65  KALREQFRKRREEKERSKIEKD 87
             L  Q   RR+ K++  ++KD
Sbjct: 90  NFLHAQVEMRRKAKDKEALQKD 110

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0K7W9_CUCSA4.3e-1148.78Uncharacterized protein OS=Cucumis sativus GN=Csa_7G290550 PE=4 SV=1[more]
A0A0A0LNF9_CUCSA9.0e-0946.34Uncharacterized protein OS=Cucumis sativus GN=Csa_2G145900 PE=4 SV=1[more]
A0A0A0K4R7_CUCSA5.5e-0659.09Uncharacterized protein OS=Cucumis sativus GN=Csa_7G298750 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659083323|ref|XP_008442290.1|8.4e-1653.61PREDICTED: stress response protein NST1-like [Cucumis melo][more]
gi|659090014|ref|XP_008445787.1|2.1e-1455.81PREDICTED: axoneme-associated protein mst101(3)-like [Cucumis melo][more]
gi|700189199|gb|KGN44432.1|6.2e-1148.78hypothetical protein Csa_7G290550 [Cucumis sativus][more]
gi|659130998|ref|XP_008465464.1|6.8e-1046.07PREDICTED: DNA ligase 1-like [Cucumis melo][more]
gi|700206372|gb|KGN61491.1|1.3e-0846.34hypothetical protein Csa_2G145900 [Cucumis sativus][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C023122T1MELO3C023122T1mRNA


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 64..84
scor

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None