MELO3C023107 (gene) Melon (DHL92) v3.5.1

NameMELO3C023107
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionAcyl-CoA synthetase family member 3, mitochondrial
Locationchr8 : 14753532 .. 14754161 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCCCTCACCTCCAAAATCTGCAAACTCTTCAAAGGGCAAACGCTACAAGGGAATCCCAACGAAACATCTTAATAAGAAAATTCATCGGTCTGTTCTGCCTACTGAGGATGGTCAGCATTGTCAAGTACCCAACCATGTCCCTTGCTCATATGCAGGGTGATCTTCTAACCCTGTATCTCCTGTTACTGTCAAAAAGGAAGTCCCTGAGTTTTCTCCACCACGCACTTCCCGTCCGACTGCATCCTCCTCTGTGCCGAAACCTAGGGTTTTTGTTGAGACAGTGGTATTAGATTCTGATTCCTCTGACATTGAAGATGAAGCGGTATTGTCAACCCTTCTCCATCGCAAGGTAGGGTCTCATTCTGGTCAATCCCTACCACGGGAAGCATCTTCTCCTACGGAGGATCTATCTCGGTCTACTGGCCATGGTCCGTCTTCTGCTGCTCCGTCATCACCTCATGCTTCCCCACCAGCTTCTCTTCTAACCGATGAAGACGATGCAAGTGACGAAACTGACGAAGATTATGTACCTAGAACTAAAGAAATGACCATTCTCGAGGACTCTTTGACCTCTACTGAGGATTCTAGTGCGTCCCATGATGATCGGACGTCAAAACCTAGGTAA

mRNA sequence

ATGGCTCCCTCACCTCCAAAATCTGCAAACTCTTCAAAGGGCAAACGCTACAAGGGAATCCCAACGAAACATCTTAATAAGAAAATTCATCGGTCTGTTCTGCCTACTGAGGATGGTCAGCATTGTCAAGAAGTCCCTGAGTTTTCTCCACCACGCACTTCCCGTCCGACTGCATCCTCCTCTGTGCCGAAACCTAGGGTTTTTGTTGAGACAGTGGTATTAGATTCTGATTCCTCTGACATTGAAGATGAAGCGGTATTGTCAACCCTTCTCCATCGCAAGGTAGGGTCTCATTCTGGTCAATCCCTACCACGGGAAGCATCTTCTCCTACGGAGGATCTATCTCGGTCTACTGGCCATGGTCCGTCTTCTGCTGCTCCGTCATCACCTCATGCTTCCCCACCAGCTTCTCTTCTAACCGATGAAGACGATGCAAGTGACGAAACTGACGAAGATTATGTACCTAGAACTAAAGAAATGACCATTCTCGAGGACTCTTTGACCTCTACTGAGGATTCTAGTGCGTCCCATGATGATCGGACGTCAAAACCTAGGTAA

Coding sequence (CDS)

ATGGCTCCCTCACCTCCAAAATCTGCAAACTCTTCAAAGGGCAAACGCTACAAGGGAATCCCAACGAAACATCTTAATAAGAAAATTCATCGGTCTGTTCTGCCTACTGAGGATGGTCAGCATTGTCAAGAAGTCCCTGAGTTTTCTCCACCACGCACTTCCCGTCCGACTGCATCCTCCTCTGTGCCGAAACCTAGGGTTTTTGTTGAGACAGTGGTATTAGATTCTGATTCCTCTGACATTGAAGATGAAGCGGTATTGTCAACCCTTCTCCATCGCAAGGTAGGGTCTCATTCTGGTCAATCCCTACCACGGGAAGCATCTTCTCCTACGGAGGATCTATCTCGGTCTACTGGCCATGGTCCGTCTTCTGCTGCTCCGTCATCACCTCATGCTTCCCCACCAGCTTCTCTTCTAACCGATGAAGACGATGCAAGTGACGAAACTGACGAAGATTATGTACCTAGAACTAAAGAAATGACCATTCTCGAGGACTCTTTGACCTCTACTGAGGATTCTAGTGCGTCCCATGATGATCGGACGTCAAAACCTAGGTAA

Protein sequence

MAPSPPKSANSSKGKRYKGIPTKHLNKKIHRSVLPTEDGQHCQEVPEFSPPRTSRPTASSSVPKPRVFVETVVLDSDSSDIEDEAVLSTLLHRKVGSHSGQSLPREASSPTEDLSRSTGHGPSSAAPSSPHASPPASLLTDEDDASDETDEDYVPRTKEMTILEDSLTSTEDSSASHDDRTSKPR*
BLAST of MELO3C023107 vs. NCBI nr
Match: gi|659082052|ref|XP_008441642.1| (PREDICTED: uncharacterized protein LOC103485722 [Cucumis melo])

HSP 1 Score: 218.8 bits (556), Expect = 8.1e-54
Identity = 125/209 (59.81%), Postives = 135/209 (64.59%), Query Frame = 1

Query: 1   MAPSPPKSANSSKGKRYKGIPTKHLNKKIHRSVLPTEDGQHCQ----------------- 60
           MA SPPK+  SSKGKRYKGIPTKH  KKIHRSV PTE+GQHCQ                 
Sbjct: 162 MALSPPKTVTSSKGKRYKGIPTKHPYKKIHRSVPPTEEGQHCQVPIPVHCSHAGCSSNPG 221

Query: 61  -------EVPEFSPPRTSRPTASSSVPKPRVFVETVVLDSDSSDIEDEAVLSTLLHRKVG 120
                  EVPEFSPPRTS  + SSSVP+PRV +ETVVLDSDSSD +D  VLSTLLHRK  
Sbjct: 222 SLITVKKEVPEFSPPRTSHLSTSSSVPEPRVSIETVVLDSDSSDSKDNVVLSTLLHRK-- 281

Query: 121 SHSGQSLPREASSPTEDLSRSTGHGPSSAAPSSPHASPPASLLTDEDDASDETDEDYVPR 180
                                     SSAAPSSPHA P ASL T+EDDASDETDEDYVP 
Sbjct: 282 --------------------------SSAAPSSPHAFPQASLPTNEDDASDETDEDYVPG 341

Query: 181 TKEMTILEDSLTSTEDSSASHDDRTSKPR 186
           T+E T+LEDS TSTED SASHD RT +PR
Sbjct: 342 TEETTVLEDSSTSTEDPSASHDARTLEPR 342

BLAST of MELO3C023107 vs. NCBI nr
Match: gi|659126154|ref|XP_008463038.1| (PREDICTED: putative protein TPRXL [Cucumis melo])

HSP 1 Score: 130.2 bits (326), Expect = 3.8e-27
Identity = 95/221 (42.99%), Postives = 120/221 (54.30%), Query Frame = 1

Query: 1   MAPSPPKSANSSKGKRYKGIPTKHLNKKIHRSVLPTED-----GQHC------------- 60
           M  +  KS   SKGKRYKGIPTKHL KK+ +S+   E+      +H              
Sbjct: 1   MDTAAAKSTTFSKGKRYKGIPTKHLYKKVRKSIPSGENSAVPSPEHSSNAERLENPPSPV 60

Query: 61  ---QEVPEFSPPRTSRPTASSSVPK------PRVFVETVVLDSDSSDIEDEAVLSTLLHR 120
              +EV EFS P+++ P+ S S+PK      PRV VETV+LDSDSS+ ED  VLSTLLHR
Sbjct: 61  TVKEEVLEFSSPQSALPSVSLSIPKSSSRPEPRVSVETVILDSDSSNSEDNIVLSTLLHR 120

Query: 121 KVGSHSGQSL----PREAS--SPTEDLSRSTGHGPSSAAPSS---PHASPPASLLTDEDD 180
                S Q+     P+ +   SP     RS+ H   S APSS   P  +PP S+  D+DD
Sbjct: 121 TRSVRSNQTASPAKPQASGGVSPKVASPRSSKHTKYSGAPSSQASPRTTPP-SVADDDDD 180

Query: 181 ASDETDEDYVPRTKEMTILEDSLTSTEDSSASHDDRTSKPR 186
             D  D+DY P TKE T  E + TSTE+ SAS +   S  R
Sbjct: 181 DFD--DKDYAPGTKEKTEAEATSTSTENQSASQEKDPSDHR 218

BLAST of MELO3C023107 vs. NCBI nr
Match: gi|659114605|ref|XP_008457140.1| (PREDICTED: uncharacterized protein LOC103496886 [Cucumis melo])

HSP 1 Score: 127.1 bits (318), Expect = 3.2e-26
Identity = 94/212 (44.34%), Postives = 115/212 (54.25%), Query Frame = 1

Query: 1   MAPSPPKSANSSKGKRYKGIPTKHLNKKIHRSVLPTE--------DGQHCQ--------- 60
           M P+  KS  SSKGKRYKGI TKH  KK+ +S+   E           H +         
Sbjct: 28  MDPTASKSTTSSKGKRYKGISTKHPYKKVRKSISSGEYSTVPSPAHSSHVERSANPPSPV 87

Query: 61  ----EVPEFSPPRTSRPTASSSV------PKPRVFVETVVLDSDSSDIEDEAVLSTLLHR 120
               EV EFS P+++RP+ SSSV      P+PRV VETVVLD +SSD +D  +LSTLLHR
Sbjct: 88  TVKEEVLEFSSPQSARPSVSSSVSKLPSRPEPRVSVETVVLDFNSSDSDDNVILSTLLHR 147

Query: 121 KVGSHSGQS---LPREAS---SPTEDLSRSTGHGPSSAAPSSPHASP---PASLLTDEDD 177
              + S Q+   +  +AS   SP     R + H   S  PSS  ASP   P     DEDD
Sbjct: 148 TRSTRSNQTTSLIKPQASGGVSPKVAPPRPSEHTKYSGTPSS-QASPKTVPPGEADDEDD 207

BLAST of MELO3C023107 vs. NCBI nr
Match: gi|659118726|ref|XP_008459271.1| (PREDICTED: uncharacterized protein LOC103498446 [Cucumis melo])

HSP 1 Score: 120.9 bits (302), Expect = 2.3e-24
Identity = 86/213 (40.38%), Postives = 109/213 (51.17%), Query Frame = 1

Query: 1   MAPSPPKSANSSKGKRYKGIPTKHLNKKIHRSVLPTE-----DGQHC------------- 60
           M P+ PK   SSKGKRYKGIPTKH  KK+ +S+L  E        H              
Sbjct: 28  MDPTAPKLITSSKGKRYKGIPTKHPYKKVRKSILSGEYSTVSSPAHSSYAERSANPPSPV 87

Query: 61  ---QEVPEFSPPRTSRPTASSSVPK------PRVFVETVVLDSDSSDIEDEAVLSTLLHR 120
              +EV EFS P++  P+ SSSVPK      PRV VETVVLDSDSSD +D  +LSTLLHR
Sbjct: 88  TVKEEVLEFSSPQSVHPSVSSSVPKSLSRPEPRVSVETVVLDSDSSDSDDNVILSTLLHR 147

Query: 121 KVGSHSGQSLPREASSPTEDLSRSTGHGPSSAAPSS-PHASPPASLLTDEDDASDETDED 180
              + + Q+                    S A P + P  +PP  +  ++DD+ DE   D
Sbjct: 148 TRSARNNQTT-------------------SPAKPQAFPKTAPPGEVDVEDDDSDDE---D 207

Query: 181 YVPRTKEMTILEDSLTSTEDSSASHDDRTSKPR 186
           Y   T+E T  E + TSTE+ SAS +   S  R
Sbjct: 208 YALGTEEKTEAETTSTSTENHSASPEKDPSDHR 218

BLAST of MELO3C023107 vs. NCBI nr
Match: gi|659072220|ref|XP_008464058.1| (PREDICTED: putative protein TPRXL [Cucumis melo])

HSP 1 Score: 118.6 bits (296), Expect = 1.1e-23
Identity = 81/177 (45.76%), Postives = 100/177 (56.50%), Query Frame = 1

Query: 1   MAPSPPKSANSSKGKRYKGIPTKHLNKKIHRSVLPTEDGQHCQEVPEFSPPRTSRPTASS 60
           +APSPPKSA +SKGKRYKGIPTKH  KK+ RSV  T +G H         P TS P  SS
Sbjct: 70  IAPSPPKSATTSKGKRYKGIPTKHPYKKVRRSVTATAEGLH--------SPLTS-PVRSS 129

Query: 61  SVPKPRVFVETVVLDSDSSDI-EDEAVLSTLLHRKVGSHSGQSLPREASSPTEDLSRSTG 120
              +P   V  V +  +  ++     V ST L  +  S    S PR+ S   E   ++T 
Sbjct: 130 HAGRPSDPVSPVTVKKEVPEVGHHNNVSSTPLQPRPTS---SSPPRDTSLSKEGPPQTTD 189

Query: 121 HGPSSAAPSSPHASPPASLLTDEDDASDETDEDYVPRTKEMTILEDSLTSTEDSSAS 177
              SS A SSP  S P    TD DDASDETDEDYV  TKE T+LE++ TS+E  ++S
Sbjct: 190 QSKSSTASSSPSGSLP----TDVDDASDETDEDYVLGTKETTVLEETSTSSEAFASS 230

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
gi|659082052|ref|XP_008441642.1|8.1e-5459.81PREDICTED: uncharacterized protein LOC103485722 [Cucumis melo][more]
gi|659126154|ref|XP_008463038.1|3.8e-2742.99PREDICTED: putative protein TPRXL [Cucumis melo][more]
gi|659114605|ref|XP_008457140.1|3.2e-2644.34PREDICTED: uncharacterized protein LOC103496886 [Cucumis melo][more]
gi|659118726|ref|XP_008459271.1|2.3e-2440.38PREDICTED: uncharacterized protein LOC103498446 [Cucumis melo][more]
gi|659072220|ref|XP_008464058.1|1.1e-2345.76PREDICTED: putative protein TPRXL [Cucumis melo][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C023107T1MELO3C023107T1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None