MELO3C023060 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C023060
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionComplex I assembly factor TIMMDC1, mitochondrial
Locationchr5 : 6769546 .. 6769725 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGACCGACACAAAAAAACCTCTAAAATCTCTCATACCTCTAAGTTCACCTCGAAAAAGAATGCTTCATCCATTCAACCACAAGAGAAATGCCCTGAAGCATCCATGAAACTTGAATCTTCTTACGAGAAATCCAGACCTGAGGGTTCTGAGAAAAAGATCTTCCTCAAGCCTTGA

mRNA sequence

ATGGCCGACCGACACAAAAAAACCTCTAAAATCTCTCATACCTCTAAGTTCACCTCGAAAAAGAATGCTTCATCCATTCAACCACAAGAGAAATGCCCTGAAGCATCCATGAAACTTGAATCTTCTTACGAGAAATCCAGACCTGAGGGTTCTGAGAAAAAGATCTTCCTCAAGCCTTGA

Coding sequence (CDS)

ATGGCCGACCGACACAAAAAAACCTCTAAAATCTCTCATACCTCTAAGTTCACCTCGAAAAAGAATGCTTCATCCATTCAACCACAAGAGAAATGCCCTGAAGCATCCATGAAACTTGAATCTTCTTACGAGAAATCCAGACCTGAGGGTTCTGAGAAAAAGATCTTCCTCAAGCCTTGA

Protein sequence

MADRHKKTSKISHTSKFTSKKNASSIQPQEKCPEASMKLESSYEKSRPEGSEKKIFLKP*
Homology
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BLAST of MELO3C023060 vs. NCBI nr
Match: gi|659072222|ref|XP_008464070.1| (PREDICTED: stress response protein NST1-like [Cucumis melo])

HSP 1 Score: 67.8 bits (164), Expect = 7.5e-09
Identity = 36/59 (61.02%), Postives = 42/59 (71.19%), Query Frame = 1 

Query: 1  MADRHKKTSKISHTSKFTSKKNASSIQPQEKCPEASMKLESSYEKSRPEGSEKKIFLKP 60
          MAD+HKK  + SHTSK   +K+AS IQPQ K  + S K ESS +KSR EGS KKI LKP
Sbjct: 1  MADQHKKALETSHTSKLIPEKDASFIQPQAKHLKVSKKPESSSKKSRSEGSRKKILLKP 59

The following BLAST results are available for this feature:
BLAST of MELO3C023060 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659072222|ref|XP_008464070.1|7.5e-0961.02PREDICTED: stress response protein NST1-like [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C023060T1MELO3C023060T1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C023060Cucumber (Gy14) v1cgymeB434
MELO3C023060Cucumber (Gy14) v1cgymeB624
MELO3C023060Cucurbita maxima (Rimu)cmameB234
MELO3C023060Cucurbita maxima (Rimu)cmameB338
MELO3C023060Cucurbita maxima (Rimu)cmameB760
MELO3C023060Cucurbita maxima (Rimu)cmameB845
MELO3C023060Cucurbita moschata (Rifu)cmomeB221
MELO3C023060Cucurbita moschata (Rifu)cmomeB331
MELO3C023060Cucurbita moschata (Rifu)cmomeB752
MELO3C023060Cucurbita moschata (Rifu)cmomeB828
MELO3C023060Wild cucumber (PI 183967)cpimeB141
MELO3C023060Wild cucumber (PI 183967)cpimeB226
MELO3C023060Cucumber (Chinese Long) v2cumeB131
MELO3C023060Cucumber (Chinese Long) v2cumeB231
MELO3C023060Watermelon (Charleston Gray)mewcgB385
MELO3C023060Watermelon (Charleston Gray)mewcgB388
MELO3C023060Watermelon (97103) v1mewmB413
MELO3C023060Watermelon (97103) v1mewmB430
MELO3C023060Cucurbita pepo (Zucchini)cpemeB137
MELO3C023060Cucurbita pepo (Zucchini)cpemeB310
MELO3C023060Cucurbita pepo (Zucchini)cpemeB578
MELO3C023060Cucurbita pepo (Zucchini)cpemeB804
MELO3C023060Bottle gourd (USVL1VR-Ls)lsimeB025
MELO3C023060Bottle gourd (USVL1VR-Ls)lsimeB360
MELO3C023060Cucumber (Gy14) v2cgybmeB122
MELO3C023060Cucumber (Gy14) v2cgybmeB195
MELO3C023060Silver-seed gourdcarmeB0233
MELO3C023060Silver-seed gourdcarmeB0238
MELO3C023060Silver-seed gourdcarmeB0939
MELO3C023060Silver-seed gourdcarmeB1046
MELO3C023060Cucumber (Chinese Long) v3cucmeB143
MELO3C023060Cucumber (Chinese Long) v3cucmeB232
MELO3C023060Watermelon (97103) v2mewmbB384
MELO3C023060Watermelon (97103) v2mewmbB388
MELO3C023060Wax gourdmewgoB446
MELO3C023060Wax gourdmewgoB450
MELO3C023060Melon (DHL92) v3.5.1memeB147